| Clone Name | rbags6d11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103959.1| Zea mays PCO068678 mRNA sequence Length = 1621 Score = 535 bits (270), Expect = e-149 Identities = 483/554 (87%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 202 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1357 gcttctgctgcatctcctttcttgcctttcttcttcttcccaccacccttcttctttgat 1298 Query: 203 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 262 || || |||||||||||||| ||||| ||||| |||| || ||||||||||| | |||| Sbjct: 1297 ttcgtccccaaagcaagccatgcctttatctctgcattgtcttcaatggatttggtgggc 1238 Query: 263 tccaactgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacg 322 | |||| |||||| |||||||| || ||||| || || ||||| ||||||| || ||| Sbjct: 1237 tttaactcctgtagaggatgtgatgttatcttatctgatccattgggcatcagcagcaca 1178 Query: 323 gtgaatttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgc 382 ||||| || ||||| ||||||||||||||| |||| ||||| || |||||||| |||||| Sbjct: 1177 gtgaactttatgtgtgcaacaagatcgcctggcttctcatgaagtacagggtacggctgc 1118 Query: 383 aacagctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgcc 442 || || ||||| ||||||||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1117 aatagttcatggttcatgcattccaccaagcctaaacgcgcacgcttctcttctaatgcc 1058 Query: 443 ctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgat 502 |||||||| || ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 1057 ctagcagtaaaaggcatgattgggaacttctggctgatctcactgaaaataaaccttgac 998 Query: 503 gccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttc 562 || ||||||||||||||||| ||||||||||| || || || || || |||||||| ||| Sbjct: 997 gctttcatcttcaagtgataattcttgtctacggcccttttgtagatggtggtctgtttc 938 Query: 563 tcatccaatagctttggctttccctcgccagtgctggtgacaatatcaattgcatacact 622 |||||||||| ||| ||||| ||||| |||||||||||||||||||| |||||||| ||| Sbjct: 937 tcatccaataacttgggcttcccctccccagtgctggtgacaatatcgattgcatatact 878 Query: 623 tcattttcttcaaattcagcatcatccaccttggtatcagcattggaaacactaagtacc 682 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| || || Sbjct: 877 tcattttcttcaaattcagcatcatcaacctttgtatcagcattggagacactgagcaca 818 Query: 683 actttgttaccatc 696 |||||||||||||| Sbjct: 817 actttgttaccatc 804 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 13 ccacagctgaatgtaatataacacaatcag 42 ||||| |||||||||||||||||| ||||| Sbjct: 1486 ccacaactgaatgtaatataacaccatcag 1457
>dbj|AK102897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112P14, full insert sequence Length = 1530 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Minus Query: 329 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 388 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1096 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1037 Query: 389 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 448 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1036 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 977 Query: 449 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 508 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 976 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 917 Query: 509 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 568 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 916 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 857 Query: 569 aatagctttggctttccctcgccagtgctggtgacaatatcaattgcatacacttcattt 628 |||| ||| ||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 856 aataacttgggcttcccttctccagtgctggtgacaatatcaattgcatacacttcattt 797 Query: 629 tcttcaaattcagcatcatccaccttggtatcagcattggaaacactaagtaccactttg 688 || ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 796 tcctcaaattcagcatcatccaccttcgtatcagcattggacacactaagtacaactttg 737 Query: 689 ttacc 693 ||||| Sbjct: 736 ttacc 732 Score = 103 bits (52), Expect = 8e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 202 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1282 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1223 Query: 203 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 262 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1222 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1163 Query: 263 tccaactgctgtagtg 278 | ||||| ||| |||| Sbjct: 1162 tgcaactcctgaagtg 1147
>dbj|AK061712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G08, full insert sequence Length = 1427 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Minus Query: 329 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 388 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1098 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 1039 Query: 389 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 448 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1038 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 979 Query: 449 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 508 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 978 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 919 Query: 509 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 568 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 918 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 859 Query: 569 aatagctttggctttccctcgccagtgctggtgacaatatcaattgcatacacttcattt 628 |||| ||| ||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 858 aataacttgggcttcccttctccagtgctggtgacaatatcaattgcatacacttcattt 799 Query: 629 tcttcaaattcagcatcatccaccttggtatcagcattggaaacactaagtaccactttg 688 || ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 798 tcctcaaattcagcatcatccaccttcgtatcagcattggacacactaagtacaactttg 739 Query: 689 ttacc 693 ||||| Sbjct: 738 ttacc 734 Score = 103 bits (52), Expect = 8e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 202 ||||||||||||||||||||||| |||||||| || || |||||| |||||||||| Sbjct: 1284 gcttctgctgcatctcctttcttacctttcttcttttttgcaccacttttcttctttgtt 1225 Query: 203 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 262 ||||| |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1224 tttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatggatttagtgggc 1165 Query: 263 tccaactgctgtagtg 278 | ||||| ||| |||| Sbjct: 1164 tgcaactcctgaagtg 1149
>gb|AF020787.1|AF020787 Oryza sativa DNA-binding protein GBP16 (Rgbp16) mRNA, complete cds Length = 1422 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Minus Query: 329 ttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaacagc 388 |||||||| |||||||| |||||| |||| || || || |||||||| |||||||| | Sbjct: 1043 ttgatgtgtgcaacaaggtcgcctggcttctcgtgaaggacagggtacggctgcaataat 984 Query: 389 tcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctagca 448 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 983 tcatgattcatgcattccaccaaacctaagcgtgcacgcttctcttccaatgccctagca 924 Query: 449 gtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgccttc 508 ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 923 gtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctagatgctttc 864 Query: 509 atcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcatcc 568 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 863 atcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgcttctcatcc 804 Query: 569 aatagctttggctttccctcgccagtgctggtgacaatatcaattgcatacacttcattt 628 |||| ||| ||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 803 aataacttgggcttcccttctccagtgctggtgacaatatcaattgcatacacttcattt 744 Query: 629 tcttcaaattcagcatcatccaccttggtatcagcattggaaacactaagtaccactttg 688 || ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 743 tcctcaaattcagcatcatccaccttcgtatcagcattggacacactaagtacaactttg 684 Query: 689 ttacc 693 ||||| Sbjct: 683 ttacc 679 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgac 202 ||||||||||||||||||||||| |||||||| || | | |||||| |||||||||| Sbjct: 1229 gcttctgctgcatctcctttcttacctttcttcttttgggcaccacttttcttctttgtt 1170 Query: 203 tttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggc 262 || || |||||||||||||| ||||||||||| || | || ||||||||||| | |||| Sbjct: 1169 ttggtccccaaagcaagccatgccttgatctcagcgtggtcttcaatggatttagtgggc 1110 Query: 263 tccaac 268 | |||| Sbjct: 1109 tgcaac 1104
>gb|BT023967.1| Zea mays clone EL01N0406A06 mRNA sequence Length = 1422 Score = 385 bits (194), Expect = e-103 Identities = 392/458 (85%) Strand = Plus / Minus Query: 147 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 206 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 1189 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 1130 Query: 207 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 266 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 1129 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 1070 Query: 267 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 326 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 1069 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 1010 Query: 327 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 386 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 1009 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 950 Query: 387 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 446 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 949 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 890 Query: 447 cagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcct 506 ||||||| ||||||||||||||||||||||| || |||||||| || |||||||| || | Sbjct: 889 cagtgaagggcatgattgggaacttctggctgatttcactgaaaataaaccttgacgctt 830 Query: 507 tcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgcttctcat 566 ||||||||| || ||| |||||||||||||| || || || || || ||||||||||||| Sbjct: 829 tcatcttcaggttataattcttgtctacagcccttttgtagatggttgtctgcttctcat 770 Query: 567 ccaatagctttggctttccctcgccagtgctggtgaca 604 |||||| ||| ||||| ||||| ||||||||||||||| Sbjct: 769 ccaataacttgggcttcccctccccagtgctggtgaca 732 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 ctgaatgtaatataacacaatcag 42 |||||||||||||||||| ||||| Sbjct: 1313 ctgaatgtaatataacaccatcag 1290
>gb|BT016573.1| Zea mays clone Contig406 mRNA sequence Length = 583 Score = 283 bits (143), Expect = 4e-73 Identities = 284/331 (85%) Strand = Plus / Minus Query: 147 ctgctgcatctcctttcttgcctttctttttcttgccaccacccttcttctttgactttg 206 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || | Sbjct: 344 ctgctgcatctcctttcttgcctttcttcttctttccaccacccttcttctttgatttcg 285 Query: 207 tgcccaaagcaagccaagccttgatctccgcatcatcctcaatggattttgagggctcca 266 | |||||||||||||| ||||| ||||| |||| || ||||||||||||| |||| | Sbjct: 284 tccccaaagcaagccatgcctttatctcagcattgtcttcaatggattttgttggcttta 225 Query: 267 actgctgtagtggatgtgacgtgatcttgtcagacccatttggcatcaacaacacggtga 326 ||| |||||| |||| ||| || ||| | || || ||||| ||||| | || ||| |||| Sbjct: 224 actcctgtagcggatatgatgtaatcctatccgatccattgggcattagcagcacagtga 165 Query: 327 atttgatgtgggcaacaagatcgccttgcttttcatggagaacagggtatggctgcaaca 386 | || ||||| |||||||| || ||| |||| ||||| || |||||||| |||||||| | Sbjct: 164 actttatgtgtgcaacaaggtcacctggcttctcatgaagtacagggtacggctgcaata 105 Query: 387 gctcatgattcatgcattctaccaaacctaagcgtgcacgcttctcctccaacgccctag 446 ||||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||||| Sbjct: 104 gctcatggttcatgcattccaccaagcctaagcgtgcacgcttctcttctaatgccctag 45 Query: 447 cagtgaatggcatgattgggaacttctggct 477 ||||||| ||||||||||||||||||||||| Sbjct: 44 cagtgaagggcatgattgggaacttctggct 14 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 ctgaatgtaatataacacaatcag 42 |||||||||||||||||| ||||| Sbjct: 468 ctgaatgtaatataacaccatcag 445
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 174 bits (88), Expect = 3e-40 Identities = 127/140 (90%) Strand = Plus / Minus Query: 442 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 501 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 59679 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 59620 Query: 502 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 561 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 59619 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 59560 Query: 562 ctcatccaatagctttggct 581 ||||||||||| ||| |||| Sbjct: 59559 ctcatccaataacttgggct 59540 Score = 174 bits (88), Expect = 3e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 590 ccagtgctggtgacaatatcaattgcatacacttcattttcttcaaattcagcatcatcc 649 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 59450 ccagtgctggtgacaatatcaattgcatacacttcattttcctcaaattcagcatcatcc 59391 Query: 650 accttggtatcagcattggaaacactaagtaccactttgttacc 693 ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 59390 accttcgtatcagcattggacacactaagtacaactttgttacc 59347 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 368 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 427 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 59828 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 59769 Query: 428 ttctcctccaacgccct 444 ||||| ||||| ||||| Sbjct: 59768 ttctcttccaatgccct 59752 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 191 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 250 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 60218 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 60159 Query: 251 gattttgagggctccaactgctgtagtg 278 ||||| | ||||| ||||| ||| |||| Sbjct: 60158 gatttagtgggctgcaactcctgaagtg 60131 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttctt 165 ||||||||||||||||||||||| Sbjct: 60372 gcttctgctgcatctcctttctt 60350
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 174 bits (88), Expect = 3e-40 Identities = 127/140 (90%) Strand = Plus / Minus Query: 442 cctagcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttga 501 |||||||||||| |||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct: 16419242 cctagcagtgaagggcatgataggaaacttctggcttatctcactgaaaatgaacctaga 16419183 Query: 502 tgccttcatcttcaagtgatagttcttgtctacagctctcttataaatagtggtctgctt 561 ||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 16419182 tgctttcatcttcaagtgataattcttgtctacagctctcttgtagatggtggtctgctt 16419123 Query: 562 ctcatccaatagctttggct 581 ||||||||||| ||| |||| Sbjct: 16419122 ctcatccaataacttgggct 16419103 Score = 174 bits (88), Expect = 3e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 590 ccagtgctggtgacaatatcaattgcatacacttcattttcttcaaattcagcatcatcc 649 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 16419013 ccagtgctggtgacaatatcaattgcatacacttcattttcctcaaattcagcatcatcc 16418954 Query: 650 accttggtatcagcattggaaacactaagtaccactttgttacc 693 ||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 16418953 accttcgtatcagcattggacacactaagtacaactttgttacc 16418910 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 368 acagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgtgcacgc 427 |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 16419391 acagggtacggctgcaataattcatgattcatgcattccaccaaacctaagcgtgcacgc 16419332 Query: 428 ttctcctccaacgccct 444 ||||| ||||| ||||| Sbjct: 16419331 ttctcttccaatgccct 16419315 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 191 ttcttctttgactttgtgcccaaagcaagccaagccttgatctccgcatcatcctcaatg 250 |||||||||| ||||| |||||||||||||| ||||||||||| || | || |||||| Sbjct: 16419781 ttcttctttgtttttgtccccaaagcaagccatgccttgatctcagcgttgtcttcaatg 16419722 Query: 251 gattttgagggctccaactgctgtagtg 278 ||||| | ||||| ||||| ||| |||| Sbjct: 16419721 gatttagtgggctgcaactcctgaagtg 16419694 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 143 gcttctgctgcatctcctttctt 165 ||||||||||||||||||||||| Sbjct: 16419935 gcttctgctgcatctcctttctt 16419913 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 621 cttcattttcttcaaattcagcatc 645 ||||||||||||||| ||||||||| Sbjct: 16952585 cttcattttcttcaacttcagcatc 16952561
>gb|BT013897.1| Lycopersicon esculentum clone 132894F, mRNA sequence Length = 1587 Score = 165 bits (83), Expect = 2e-37 Identities = 317/395 (80%) Strand = Plus / Minus Query: 302 ccatttggcatcaacaacacggtgaatttgatgtgggcaacaagatcgccttgcttttca 361 ||||| ||||| |||| ||| ||||| || ||||| ||||| | ||| || | || ||| Sbjct: 1174 ccattaggcattaacagcactgtgaacttaatgtgagcaaccaaatcaccaggtttctca 1115 Query: 362 tggagaacagggtatggctgcaacagctcatgattcatgcattctaccaaacctaagcgt 421 || |||||||| ||||||||||| |||||||| || | ||||| || | || || || Sbjct: 1114 tgtagaacaggatatggctgcaaaagctcatggttaacacattcaacaaggcccaaacga 1055 Query: 422 gcacgcttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatc 481 || | |||||||||||| |||| || || ||||||||||| ||||||||||| || || Sbjct: 1054 gctctcttctcctccaaatcccttgcggtaaatggcatgatagggaacttctgactgatt 995 Query: 482 tcactgaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctc 541 |||||||||||||||||||| || |||||||||| || |||| ||||||| ||||||||| Sbjct: 994 tcactgaagatgaaccttgaggctttcatcttcaggttatagctcttgtccacagctctc 935 Query: 542 ttataaatagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtg 601 || || || || || || ||||||||||| | ||| |||||||| || |||||||| || Sbjct: 934 ttgtagatcgttgtttgtttctcatccaacaacttgggctttccatcaccagtgctcgtc 875 Query: 602 acaatatcaattgcatacacttcattttcttcaaattcagcatcatccaccttggtatca 661 || |||||||| | || || ||||| ||||||||||| || ||||| || | |||||| Sbjct: 874 acgatatcaatggagtagacctcattctcttcaaattctgcttcatctactcttgtatca 815 Query: 662 gcattggaaacactaagtaccactttgttaccatc 696 | |||||| || || | ||| |||||||| ||||| Sbjct: 814 ggattggacacgctcaatacaactttgtttccatc 780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 158 cctttcttgcctttctttttcttgccaccacccttcttctt 198 |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 1318 cctttctttcctttctttttcttcccaccacctttcttctt 1278
>gb|AF281652.1|AF281652 Atriplex hortensis putative DNA binding protein mRNA, complete cds Length = 1460 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 427 cttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcact 486 |||||||||||||||||| || || ||||||||||| ||||| ||||| | || ||||| Sbjct: 934 cttctcctccaacgcccttgctgtaaatggcatgatagggaatttctgattgatttcact 875 Query: 487 gaagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttata 546 ||| || || |||||||| ||||| ||||||||||| |||||||| |||||||| || || Sbjct: 874 gaaaataaatcttgatgctttcattttcaagtgataattcttgtccacagctcttttgta 815 Query: 547 aatagtggtctgcttctcatccaa 570 |||||| || |||||||| ||||| Sbjct: 814 aatagttgtttgcttctcgtccaa 791
>ref|NM_115039.2| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.1 mRNA, complete cds Length = 1514 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 833 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 832 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 773 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 772 tctattgcatagacttcattctcttcaaattc 741
>ref|NM_180348.1| Arabidopsis thaliana ATG2; metalloexopeptidase/ methionyl aminopeptidase AT3G51800 (ATG2) transcript variant AT3G51800.2 mRNA, complete cds Length = 1541 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 833 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 832 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 773 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 772 tctattgcatagacttcattctcttcaaattc 741
>gb|AY142627.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1210 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 732 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 731 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 672 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 671 tctattgcatagacttcattctcttcaaattc 640
>gb|AY040067.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (At3g51800) mRNA, complete cds Length = 1179 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 732 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 731 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 672 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 671 tctattgcatagacttcattctcttcaaattc 640
>gb|AF360226.1| Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AT3g51800) mRNA, complete cds Length = 1458 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 952 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 893 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 892 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 833 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 832 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 773 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 772 tctattgcatagacttcattctcttcaaattc 741
>gb|AF422841.1| Arabidopsis thaliana cell cycle-related nuclear binding protein (cam1) mRNA, complete cds Length = 1179 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 851 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 792 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 791 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 732 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 731 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 672 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 671 tctattgcatagacttcattctcttcaaattc 640
>gb|AY056616.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) mRNA, complete cds Length = 1472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 828 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 827 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 768 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 767 tctattgcatagacttcattctcttcaaattc 736
>emb|BX823040.1|CNS0A71F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1379 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 926 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 867 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 866 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 807 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 806 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 747 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 746 tctattgcatagacttcattctcttcaaattc 715
>gb|U72503.1|ATU72503 Arabidopsis thaliana putative nuclear DNA-binding protein G2p (AtG2) mRNA, complete cds Length = 1472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 428 ttctcctccaacgccctagcagtgaatggcatgattgggaacttctggctaatctcactg 487 |||||||||| | ||| |||||||||||||| ||||| ||||| |||| || ||| Sbjct: 947 ttctcctccagtgaccttgcagtgaatggcatacgggggaagttctgtttaatttcgctg 888 Query: 488 aagatgaaccttgatgccttcatcttcaagtgatagttcttgtctacagctctcttataa 547 | ||||| || || |||||||||||||| |||||||| | || || |||| ||| Sbjct: 887 attatgaatctggaggccttcatcttcaactgatagttaacactttcatctttcttgtaa 828 Query: 548 atagtggtctgcttctcatccaatagctttggctttccctcgccagtgctggtgacaata 607 ||||| || |||||||| || |||||||||||||| || || ||||| || | |||||| Sbjct: 827 atagttgtttgcttctcgtctaatagctttggcttgccatcaccagtacttgccacaata 768 Query: 608 tcaattgcatacacttcattttcttcaaattc 639 || |||||||| |||||||| ||||||||||| Sbjct: 767 tctattgcatagacttcattctcttcaaattc 736
>gb|AY056617.1| Arabidopsis thaliana nuclear DNA-binding protein (CAM1) gene, complete cds Length = 4106 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 602 acaatatcaattgcatacacttcattttcttcaaattc 639 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 2652 acaatatctattgcatagacttcattctcttcaaattc 2615 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 540 tcttataaatagtggtctgcttctcatccaatagctttggct 581 |||| |||||||| || |||||||| || ||||||||||||| Sbjct: 2799 tcttgtaaatagttgtttgcttctcgtctaatagctttggct 2758 Score = 40.1 bits (20), Expect = 9.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 446 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 505 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 2893 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 2834 Query: 506 ttcatcttcaagtgatagtt 525 ||||||||||| |||||||| Sbjct: 2833 ttcatcttcaactgatagtt 2814
>gb|AF049236.1|AF049236 Arabidopsis thaliana putative transmembrane protein G1p (AtG1), putative nuclear DNA-binding protein G2p (AtG2), Em1 protein (ATEM1), putative chlorophyll synthetase (AtG4), putative transmembrane protein G5p (AtG5), putative acyl-coA dehydrogenase (AtG6), and calcium dependent protein kinase genes, complete cds; and unknown genes Length = 60000 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 602 acaatatcaattgcatacacttcattttcttcaaattc 639 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 14489 acaatatctattgcatagacttcattctcttcaaattc 14526 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Plus Query: 540 tcttataaatagtggtctgcttctcatccaatagctttggct 581 |||| |||||||| || |||||||| || ||||||||||||| Sbjct: 14342 tcttgtaaatagttgtttgcttctcgtctaatagctttggct 14383 Score = 40.1 bits (20), Expect = 9.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 446 gcagtgaatggcatgattgggaacttctggctaatctcactgaagatgaaccttgatgcc 505 |||||||||||||| ||||| ||||| |||| || |||| ||||| || || ||| Sbjct: 14248 gcagtgaatggcatacgggggaagttctgtttaatttcgctgattatgaatctggaggcc 14307 Query: 506 ttcatcttcaagtgatagtt 525 ||||||||||| |||||||| Sbjct: 14308 ttcatcttcaactgatagtt 14327
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 155 tctcctttcttgcctttctttttct 179 ||||||||||||||||||||||||| Sbjct: 18789971 tctcctttcttgcctttctttttct 18789995
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 155 tctcctttcttgcctttctttttct 179 ||||||||||||||||||||||||| Sbjct: 132613 tctcctttcttgcctttctttttct 132637
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 155 tctcctttcttgcctttctttttct 179 ||||||||||||||||||||||||| Sbjct: 35336 tctcctttcttgcctttctttttct 35360
>gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis gene cluster, complete sequence Length = 87427 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 625 attttcttcaaattcagcatcat 647 ||||||||||||||||||||||| Sbjct: 65431 attttcttcaaattcagcatcat 65409
>ref|XM_795059.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581850 (LOC581850), mRNA Length = 1673 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 161 ttcttgcctttctttttcttgcc 183 ||||||||||||||||||||||| Sbjct: 719 ttcttgcctttctttttcttgcc 697
>ref|NM_029355.1| Mus musculus prolactin-like protein N (Prlpn), mRNA Length = 926 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 616 atacacttcattttcttcaaat 637 |||||||||||||||||||||| Sbjct: 628 atacacttcattttcttcaaat 607
>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f), and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and 1600014J19RIK for novel proteins similar to prolactin, complete sequence Length = 211776 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 616 atacacttcattttcttcaaat 637 |||||||||||||||||||||| Sbjct: 131063 atacacttcattttcttcaaat 131084
>gb|AF332664.1|AF332664 Bothrops alternatus clone BA5 Bov-B LINE, complete sequence Length = 1746 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 ctttcttgcctttctttttctt 180 |||||||||||||||||||||| Sbjct: 634 ctttcttgcctttctttttctt 613
>dbj|AK005458.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600014J19 product:prolactin-like protein N, full insert sequence Length = 926 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 616 atacacttcattttcttcaaat 637 |||||||||||||||||||||| Sbjct: 628 atacacttcattttcttcaaat 607
>gb|AF300703.1|AF300703 Oryctolagus cuniculus parathyroid hormone-related protein (PTHrP) mRNA, complete cds Length = 534 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 cttgcctttctttttcttgcca 184 |||||||||||||||||||||| Sbjct: 387 cttgcctttctttttcttgcca 366
>gb|AF525156.1| Mus musculus placental prolactin-like protein-N mRNA, complete cds Length = 864 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 616 atacacttcattttcttcaaat 637 |||||||||||||||||||||| Sbjct: 627 atacacttcattttcttcaaat 606
>ref|NM_001003303.1| Canis familiaris parathyroid hormone-like hormone (PTHLH), mRNA Length = 1166 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcca 184 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009L15, complete sequence Length = 137570 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 621 cttcattttcttcaaattcagcatc 645 ||||||||||||||| ||||||||| Sbjct: 83622 cttcattttcttcaacttcagcatc 83598
>emb|AL359957.44| Human DNA sequence from clone RP11-62O22 on chromosome 10 Contains part of a novel gene (KIAA0934) and a CpG island, complete sequence Length = 137511 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 621 cttcattttcttcaaattcagcatc 645 ||||| ||||||||||||||||||| Sbjct: 107299 cttcagtttcttcaaattcagcatc 107275
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 188357 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tttcttgcctttctttttctt 180 ||||||||||||||||||||| Sbjct: 86946 tttcttgcctttctttttctt 86966
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 ttcttcaaattcagcatcatc 648 ||||||||||||||||||||| Sbjct: 1465939 ttcttcaaattcagcatcatc 1465959
>emb|AJ831410.1| Halichoerus grypus partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1099 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcca 184 ||||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcca 705
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ctgaatgtaatataacacaat 39 ||||||||||||||||||||| Sbjct: 87455 ctgaatgtaatataacacaat 87435
>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence Length = 167799 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 ctcctttcttgcctttctttt 176 ||||||||||||||||||||| Sbjct: 107524 ctcctttcttgcctttctttt 107544
>ref|XM_394241.2| PREDICTED: Apis mellifera similar to nudix-type motif 1 (LOC410765), mRNA Length = 735 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 acttcattttcttcaaattca 640 ||||||||||||||||||||| Sbjct: 479 acttcattttcttcaaattca 459
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ctgaatgtaatataacacaat 39 ||||||||||||||||||||| Sbjct: 6299 ctgaatgtaatataacacaat 6319
>gb|AF327654.1|AF327654 Ovis aries parathyroid hormone-related peptide mRNA, partial cds Length = 363 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 cttgcctttctttttcttgcc 183 ||||||||||||||||||||| Sbjct: 357 cttgcctttctttttcttgcc 337
>gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2, complete sequence Length = 79931 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ctcctttcttgcctttctttt 176 ||||||||||||||||||||| Sbjct: 5003 ctcctttcttgcctttctttt 4983
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 attgcatacacttcattttct 631 ||||||||||||||||||||| Sbjct: 219753 attgcatacacttcattttct 219773
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete sequence Length = 196606 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ctttcttgcctttctttttct 179 ||||||||||||||||||||| Sbjct: 73425 ctttcttgcctttctttttct 73405
>gb|U15593.1|CFU15593 Canis familiaris parathyroid hormone-related protein mRNA, complete cds Length = 1166 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcca 184 ||||||||||||||||||||| Sbjct: 553 ttgcctttctttttcttgcca 533
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 gctgcatctcctttcttgcctttc 172 |||||||| ||||||||||||||| Sbjct: 57177 gctgcatcccctttcttgcctttc 57154
>ref|XM_421458.1| PREDICTED: Gallus gallus similar to kelch domain containing 1 (LOC423568), mRNA Length = 1949 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 atacacttcattttcttcaa 635 |||||||||||||||||||| Sbjct: 128 atacacttcattttcttcaa 109
>gb|BC068955.1| Xenopus laevis hypothetical protein MGC83228, mRNA (cDNA clone MGC:83228 IMAGE:6635611), complete cds Length = 3638 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttcttgcctttctttttctt 180 |||||||||||||||||||| Sbjct: 785 ttcttgcctttctttttctt 766
>ref|XM_716436.1| Candida albicans SC5314 hypothetical protein (CaO19_3031), mRNA Length = 882 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttcttgcctttctttttctt 180 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>ref|XM_716165.1| Candida albicans SC5314 hypothetical protein (CaO19_10549), mRNA Length = 882 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttcttgcctttctttttctt 180 |||||||||||||||||||| Sbjct: 740 ttcttgcctttctttttctt 721
>gb|AY193782.2| Sus scrofa parathyroid hormone-like hormone mRNA, complete cds Length = 1336 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcc 183 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>emb|CR762428.7| Zebrafish DNA sequence from clone CH211-172N16 in linkage group 1, complete sequence Length = 140219 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gcagtgaatggcatgattgg 465 |||||||||||||||||||| Sbjct: 98074 gcagtgaatggcatgattgg 98055
>ref|XM_447914.1| Candida glabrata CBS138, CAGL0J04796g partial mRNA Length = 1800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcttgcctttctttttcttg 181 |||||||||||||||||||| Sbjct: 1765 tcttgcctttctttttcttg 1746
>ref|XM_797333.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053511619.5) partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccttcttctttgactttgtgccca 212 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>ref|XM_798036.1| Trypanosoma cruzi strain CL Brener FtsJ cell division protein (Tc00.1047053507207.19) partial mRNA Length = 1953 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccttcttctttgactttgtgccca 212 ||||||||||||||||||| |||| Sbjct: 25 ccttcttctttgactttgtcccca 2
>ref|XM_644094.1| Entamoeba histolytica HM-1:IMSS Ras guanine nucleotide exchange factor (334.t00001) partial mRNA Length = 1737 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 cttcattttcttcaaattca 640 |||||||||||||||||||| Sbjct: 1567 cttcattttcttcaaattca 1548
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence Length = 112456 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tctcctttcttgcctttctt 174 |||||||||||||||||||| Sbjct: 23468 tctcctttcttgcctttctt 23449
>gb|AC004996.1| Homo sapiens PAC clone RP5-1200I23 from 7, complete sequence Length = 100921 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tggtgacaatatcaattgca 616 |||||||||||||||||||| Sbjct: 33697 tggtgacaatatcaattgca 33716
>gb|AC005999.2| Homo sapiens PAC clone RP4-718N17 from 7, complete sequence Length = 135727 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggcttctgctgcatctcctt 161 |||||||||||||||||||| Sbjct: 133820 ggcttctgctgcatctcctt 133839
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tctcctttcttgcctttctt 174 |||||||||||||||||||| Sbjct: 57285 tctcctttcttgcctttctt 57304
>emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chromosome 6 Contains the 5' part of a novel gene, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttt 176 |||||||||||||||||||| Sbjct: 98161 tcctttcttgcctttctttt 98142
>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains ubiquinol-cytochrome c reductase binding (UQCRB) pseudogene, the UAP1 gene for UDP-N-acteylglucosamine pyrophosphorylase 1, the 5' end of the DDR2 gene for discoidin domain receptor family member 2 and a CpG island, complete sequence Length = 152770 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 79267 tcctttctttcctttctttttctt 79244
>emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on chromosome 10 Contans the 5' end of the ADAM12 gene for a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna), a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 146287 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 17395 tcctttctttcctttctttttctt 17372
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence Length = 199946 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ggtgaatttgatgtgggcaa 341 |||||||||||||||||||| Sbjct: 167175 ggtgaatttgatgtgggcaa 167194
>emb|AL157779.6| Human DNA sequence from clone RP13-310B24 on chromosome X, complete sequence Length = 99632 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 agcatcatccaccttggtat 659 |||||||||||||||||||| Sbjct: 15090 agcatcatccaccttggtat 15109
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains the 3' end of a novel gene and the gene for a novel actin like protein (LOC81569), complete sequence Length = 154028 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 aacacggtgaatttgatgtg 336 |||||||||||||||||||| Sbjct: 73796 aacacggtgaatttgatgtg 73777
>emb|AL137015.9| Human DNA sequence from clone RP13-272N16 on chromosome Xq21.2-21.33 Contains a CpG island, complete sequence Length = 99527 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 agcatcatccaccttggtat 659 |||||||||||||||||||| Sbjct: 69914 agcatcatccaccttggtat 69933
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cttgatctccgcatcatcct 245 |||||||||||||||||||| Sbjct: 352297 cttgatctccgcatcatcct 352278
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcttgcctttctttttcttg 181 |||||||||||||||||||| Sbjct: 455461 tcttgcctttctttttcttg 455442
>gb|BT008434.1| Arabidopsis thaliana At5g61270 gene, complete cds Length = 3474 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gtggtctgcttctcatccaa 570 |||||||||||||||||||| Sbjct: 1865 gtggtctgcttctcatccaa 1846
>gb|DQ099524.1| Rabies virus strain FluryLEP nucleoprotein (NP), phosphoprotein (PP), matrix protein (MP), glycoprotein (GP), and large protein (LP) genes, complete cds Length = 11711 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 2130 actgaagatgaaccttgatg 2149
>emb|AJ831411.1| Phoca vitulina partial mRNA for parathyroid hormone related protein (pthlp gene) Length = 1366 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcc 183 |||||||||||||||||||| Sbjct: 725 ttgcctttctttttcttgcc 706
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cttgatgccttcatcttcaa 516 |||||||||||||||||||| Sbjct: 1550817 cttgatgccttcatcttcaa 1550836
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctttcttgcctttctttttcttgc 182 ||||||| |||||||||||||||| Sbjct: 98034 ctttctttcctttctttttcttgc 98011
>dbj|AB226447.1| Aspergillus oryzae cDNA, contig sequence: AoEST3309 Length = 924 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctgcggcttctgctgcatct 157 |||||||||||||||||||| Sbjct: 72 ctgcggcttctgctgcatct 53
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctgcggcttctgctgcatct 157 |||||||||||||||||||| Sbjct: 833584 ctgcggcttctgctgcatct 833565
>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence Length = 162705 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cctttcttgcctttctttttcttg 181 ||||| |||||||||||||||||| Sbjct: 45537 cctttgttgcctttctttttcttg 45560
>gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190073 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 tatcaattgcatacacttcatttt 629 ||||||||||||||| |||||||| Sbjct: 49959 tatcaattgcatacatttcatttt 49982
>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence Length = 243558 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 123300 tcctttctttcctttctttttctt 123277
>ref|XM_700817.1| PREDICTED: Danio rerio hypothetical protein LOC561194 (LOC561194), partial mRNA Length = 932 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctttcttgcctttctttttcttgc 182 ||||||| |||||||||||||||| Sbjct: 215 ctttctttcctttctttttcttgc 192
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence Length = 198179 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggtgaatttgatgtgggcaa 341 |||||||||||||||||||| Sbjct: 133062 ggtgaatttgatgtgggcaa 133043
>gb|AF369346.1|AF369346 Rabies virus V077.SHB phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369329.1|AF369329 Rabies virus V466.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369327.1|AF369327 Rabies virus V463.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369316.1|AF369316 Rabies virus C1.DG phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AF369264.1|AF369264 Rabies virus V015 phosphoprotein (P) gene, complete cds Length = 920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 687 actgaagatgaaccttgatg 706
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tccaactgctgtagtggatg 282 |||||||||||||||||||| Sbjct: 86727 tccaactgctgtagtggatg 86708
>emb|CR354111.1| Gallus gallus finished cDNA, clone ChEST88j18 Length = 1072 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 atacacttcattttcttcaa 635 |||||||||||||||||||| Sbjct: 128 atacacttcattttcttcaa 109
>gb|DQ011221.1| Rabies virus strain 98 phosphoprotein mRNA, complete cds Length = 914 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 698 actgaagatgaaccttgatg 717
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 700316 tcctttctttcctttctttttctt 700339
>gb|AC157527.2| Pan troglodytes BAC clone CH251-513D12 from chromosome unknown, complete sequence Length = 210196 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tggtgacaatatcaattgca 616 |||||||||||||||||||| Sbjct: 69139 tggtgacaatatcaattgca 69158
>gb|AC146167.2| Pan troglodytes BAC clone RP43-1E11 from chromosome 7, complete sequence Length = 168862 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 tggtgacaatatcaattgca 616 |||||||||||||||||||| Sbjct: 27799 tggtgacaatatcaattgca 27818
>gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55295 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ctctcttataaatagtggtctgcttctc 564 |||| ||||||||| ||||||||||||| Sbjct: 1403 ctcttttataaatattggtctgcttctc 1430
>ref|NM_213916.1| Sus scrofa parathyroid hormone-like hormone (PTHLH), mRNA Length = 1336 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ttgcctttctttttcttgcc 183 |||||||||||||||||||| Sbjct: 705 ttgcctttctttttcttgcc 686
>gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y, complete sequence Length = 166347 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 640 agcatcatccaccttggtat 659 |||||||||||||||||||| Sbjct: 61167 agcatcatccaccttggtat 61186
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete sequence Length = 228371 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 ttccctcgccagtgctggtg 601 |||||||||||||||||||| Sbjct: 36020 ttccctcgccagtgctggtg 36001
>gb|AC125605.4| Homo sapiens 12 BAC RP11-251H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 45834 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 537 ctctcttataaatagtggtctgcttctc 564 |||| ||||||||| ||||||||||||| Sbjct: 602 ctcttttataaatattggtctgcttctc 575
>gb|BT002491.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3592 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gtggtctgcttctcatccaa 570 |||||||||||||||||||| Sbjct: 1917 gtggtctgcttctcatccaa 1898
>gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C5, complete sequence Length = 159129 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 142931 tcctttctttcctttctttttctt 142908
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cttgatctccgcatcatcct 245 |||||||||||||||||||| Sbjct: 405488 cttgatctccgcatcatcct 405469
>emb|AL831750.8| Mouse DNA sequence from clone RP23-37L2 on chromosome X, complete sequence Length = 189991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ctttctttttcttgccacca 187 |||||||||||||||||||| Sbjct: 163125 ctttctttttcttgccacca 163106
>emb|X13357.1|RHLNMG Rabies virus 3'region of genome encoding leader RNA, N, M1, M2 and G proteins Length = 3385 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 2199 actgaagatgaaccttgatg 2218
>emb|X57783.1|RAVNSPG Rabies virus NS protein gene Length = 991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>emb|X55727.1|RHABNSPP Rabies virus CVS-11 NS-phosphoprotein gene Length = 991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 actgaagatgaaccttgatg 503 |||||||||||||||||||| Sbjct: 716 actgaagatgaaccttgatg 735
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete sequence Length = 204955 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tcctttcttgcctttctttttctt 180 ||||||||| |||||||||||||| Sbjct: 152384 tcctttctttcctttctttttctt 152361
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 cttcattttcttcaaattca 640 |||||||||||||||||||| Sbjct: 3667718 cttcattttcttcaaattca 3667737
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gactttgtgcccaaagcaag 219 |||||||||||||||||||| Sbjct: 58146 gactttgtgcccaaagcaag 58127
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 40.1 bits (20), Expect = 9.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 133 gggctctgc-ggcttctgctgcatctcctttc 163 ||||||||| |||||||||||||||| ||||| Sbjct: 81392 gggctctgcaggcttctgctgcatctactttc 81423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,861,685 Number of Sequences: 3902068 Number of extensions: 7861685 Number of successful extensions: 156622 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 156059 Number of HSP's gapped (non-prelim): 553 length of query: 700 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 677 effective length of database: 17,143,297,704 effective search space: 11606012545608 effective search space used: 11606012545608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)