ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch bran... 955 0.0
2emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II 529 e-147
3gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme... 529 e-147
4gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2... 529 e-147
5gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan 6-alph... 505 e-140
6gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme... 369 6e-99
7gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full ... 343 4e-91
8dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rb... 98 4e-17
9gb|AY740401.1| Triticum aestivum starch branching enzyme IIb (SB... 54 5e-04
10gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a... 50 0.008
11gb|AF064561.1|AF064561 Hordeum vulgare cultivar Bomi starch bran... 46 0.12
12ref|XM_466059.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
13gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete... 42 1.9
14ref|NM_137701.2| Drosophila melanogaster CG4030-RA (CG4030), mRNA 42 1.9
15gb|AY061312.1| Drosophila melanogaster LD23155 full length cDNA 42 1.9
16gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, c... 42 1.9
17gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, co... 42 1.9
18dbj|AK108535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
19gb|AY109521.1| Zea mays CL1245_1 mRNA sequence 42 1.9
20gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61... 42 1.9
21gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, comp... 42 1.9
22gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, comp... 42 1.9
23dbj|D16201.1|RICBCE3 Oryza sativa mRNA for branching enzyme-3, c... 42 1.9
24gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205... 42 1.9
25gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome... 40 7.4
26gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence 40 7.4
27gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, compl... 40 7.4
28emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on ch... 40 7.4
29gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome ... 40 7.4
30emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 i... 40 7.4
31dbj|AK088955.1| Mus musculus 2 days neonate thymus thymic cells ... 40 7.4
32gb|AY235417.1| Zea mays subsp. mays cultivar NC348 amylose exten... 40 7.4
33gb|AY235412.1| Zea mays subsp. mays cultivar KI3 amylose extende... 40 7.4
34gb|AY235406.1| Zea mays subsp. mays cultivar EP1 amylose extende... 40 7.4
35gb|AY235403.1| Zea mays subsp. mays cultivar CML258 amylose exte... 40 7.4
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
37gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, comple... 40 7.4
38dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 40 7.4
39dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
40dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
41emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in... 40 7.4
42gb|DQ152827.1| Platanus x acerifolia clone pac-47 NPR1-like prot... 40 7.4
43emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on ch... 40 7.4
44emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on ch... 40 7.4 
>gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
            mRNA, nuclear gene encoding plastid protein, complete cds
          Length = 2554

 Score =  955 bits (482), Expect = 0.0
 Identities = 484/485 (99%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgtccaagttgaagcgcacgggcaattattagtttatatgtacataaacaaccgggaatg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 tgtccaagttgaagcgcacgggcaattattagtttatatgtacataaacaaccgggaatg 2469

                                                                        
Query: 121  tgagagataggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 tgagagataggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttct 2409

                                                                        
Query: 181  ttcgcaggtcacttgaaaacgagggctcgccagcaagctacctatccatctgatcctcct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 ttcgcaggtcacttgaaaacgagggctcgccagcaagctacctatccatctgatcctcct 2349

                                                                        
Query: 241  agcatctggggaagaggcacgatcccctcccaatcacggcggttagaacagtctcggacc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 agcatctggggaagaggcacgatcccctcccaatcacggcggttagaacagtctcggacc 2289

                                                                        
Query: 301  gttgcccgtcgcttcgctcacaatccacgagctcactggagttctctttttgccttgtaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 gttgcccgtcgcttcgctcacaatccacgagctcactggagttctctttttgccttgtaa 2229

                                                                        
Query: 361  caaacagctgctggttcttactctgtaagggcatacacgaccgcagttctgctcggagtg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 caaacagctgctggttcttactctgtaagggcatacacgaccgcagttctgctcggagtg 2169

                                                                        
Query: 421  tacaccgagaaagagcgtggcctgttgtcatgcggatgttcggntgtgaagtagtcgaca 480
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2168 tacaccgagaaagagcgtggcctgttgtcatgcggatgttcggttgtgaagtagtcgaca 2109

                                                                        
Query: 481  tcatgatcaagcctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 tcatgatcaagcctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttg 2049

                 
Query: 541  tactt 545
            |||||
Sbjct: 2048 tactt 2044
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>emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II
          Length = 2970

 Score =  529 bits (267), Expect = e-147
 Identities = 326/346 (94%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 259
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2800 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2741

                                                                        
Query: 260  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 319
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2740 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2681

                                                                        
Query: 320  acaatccacgagctcactggagttctctttttgccttgtaacaaacagctgctggttctt 379
            || |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2680 acgatccacgagctctctggagttctctctttgccttgtaacaagcagctgctggttctt 2621

                                                                        
Query: 380  actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtg 439
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2620 actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgcg 2561

                                                                        
Query: 440  gcctgttgtcatgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctga 499
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2560 gcctgttgtcatgcggatgttcggttgtgaagtagtcgacatcatgatcaagcctgctga 2501

                                                          
Query: 500  atccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2500 atccaccaaagagtgcatcgtcggagtctaaggccaccttgtactt 2455



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/113 (87%), Gaps = 6/113 (5%)
 Strand = Plus / Minus

                                                                        
Query: 73   agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagatagga 132
            |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||
Sbjct: 2906 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 2848

                                                                 
Query: 133  tg-gttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 184
             | |   |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2847 ggagggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2799
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>gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme IIa variant mRNA, complete
            cds
          Length = 2726

 Score =  529 bits (267), Expect = e-147
 Identities = 326/346 (94%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 259
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2608 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2549

                                                                        
Query: 260  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 319
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2548 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2489

                                                                        
Query: 320  acaatccacgagctcactggagttctctttttgccttgtaacaaacagctgctggttctt 379
            || |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2488 acgatccacgagctctctggagttctctctttgccttgtaacaagcagctgctggttctt 2429

                                                                        
Query: 380  actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtg 439
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2428 actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgcg 2369

                                                                        
Query: 440  gcctgttgtcatgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctga 499
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2368 gcctgttgtcatgcggatgttcggttgtgaagtagtcgacatcatgatcaagcctgctga 2309

                                                          
Query: 500  atccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2308 atccaccaaagagtgcatcgtcggagtctaaggccaccttgtactt 2263



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/113 (87%), Gaps = 6/113 (5%)
 Strand = Plus / Minus

                                                                        
Query: 73   agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagatagga 132
            |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||
Sbjct: 2714 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 2656

                                                                 
Query: 133  tg-gttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 184
             | |   |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2655 ggagggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2607
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>gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2) mRNA, complete cds
          Length = 2970

 Score =  529 bits (267), Expect = e-147
 Identities = 326/346 (94%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 259
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2798 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2739

                                                                        
Query: 260  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 319
            ||||||||||||| ||| |||| ||||| ||| ||||  |||||||||||||||||||||
Sbjct: 2738 cgatcccctcccagtcatggcgcttagagcagcctcgcgccgttgcccgtcgcttcgctc 2679

                                                                        
Query: 320  acaatccacgagctcactggagttctctttttgccttgtaacaaacagctgctggttctt 379
            || |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2678 acgatccacgagctctctggagttctctctttgccttgtaacaagcagctgctggttctt 2619

                                                                        
Query: 380  actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtg 439
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2618 actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgcg 2559

                                                                        
Query: 440  gcctgttgtcatgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctga 499
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2558 gcctgttgtcatgcggatgttcggttgtgaagtagtcgacatcatgatcaagcctgctga 2499

                                                          
Query: 500  atccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2498 atccaccaaagagtgcatcgtcggagtctaaggccaccttgtactt 2453



 Score =  109 bits (55), Expect = 1e-20
 Identities = 145/169 (85%), Gaps = 12/169 (7%)
 Strand = Plus / Minus

                                                                        
Query: 22   taggcaggtgaatcacgggctaacctatta---gaatatttat--gtccaagttgaagcg 76
            ||||||||| ||||||||| ||||||||||   ||||||||||  || || ||||| |||
Sbjct: 2959 taggcaggtaaatcacgggataacctattattagaatatttatatgttcacgttga-gcg 2901

                                                                        
Query: 77   cacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagataggatg-g 135
            |||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| | |
Sbjct: 2900 cacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagataggaggag 2842

                                                             
Query: 136  ttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 184
               |||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 2841 ggtagtgcagcacgacaaa----cacccaggcccgtccattttctttcg 2797
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>gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan
            6-alpha-D-(1,4-alpha-D-glucanotransferase mRNA, complete
            cds
          Length = 2853

 Score =  505 bits (255), Expect = e-140
 Identities = 323/346 (93%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 259
            |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2680 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 2621

                                                                        
Query: 260  cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 319
            ||||||||||||| ||| |||| || || ||| ||||  |||||||||||||||||||||
Sbjct: 2620 cgatcccctcccagtcatggcgcttggagcagcctcgcgccgttgcccgtcgcttcgctc 2561

                                                                        
Query: 320  acaatccacgagctcactggagttctctttttgccttgtaacaaacagctgctggttctt 379
            || |||||||||||| |||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 2560 acgatccacgagctctctggagttctctctttgccttgtaacaagccgctgctggttctt 2501

                                                                        
Query: 380  actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtg 439
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2500 actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgcg 2441

                                                                        
Query: 440  gcctgttgtcatgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctga 499
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2440 gcctgttgtcatgcggatgttcggttgtgaagtagtcgacatcatgatcaagcctgctga 2381

                                                          
Query: 500  atccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 2380 atccaccaaagagtgcatcgtcggagtccaaggccaccttgtactt 2335



 Score =  147 bits (74), Expect = 4e-32
 Identities = 138/156 (88%), Gaps = 10/156 (6%)
 Strand = Plus / Minus

                                                                        
Query: 34   tcacgggctaacctattagaatatttat--gtccaagttgaagcgcacgggcaattatta 91
            ||||||| ||||||||||||||||||||  || || ||||||||||||||||||||||||
Sbjct: 2829 tcacgggataacctattagaatatttatatgttcatgttgaagcgcacgggcaattatta 2770

                                                                        
Query: 92   gtttatatgtacataaacaaccgggaatgtgagagat---aggatggttcagtgcagcac 148
            | ||||||||||| |||||||||||||||||  ||||   |||| |||||||||||||||
Sbjct: 2769 g-ttatatgtacaaaaacaaccgggaatgtgcaagataggaggagggttcagtgcagcac 2711

                                                
Query: 149  tacaaaatgtcacccaggcccgtccattttctttcg 184
             |||||    ||||||||||||||||||||||||||
Sbjct: 2710 aacaaa----cacccaggcccgtccattttctttcg 2679
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>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds
          Length = 11475

 Score =  369 bits (186), Expect = 6e-99
 Identities = 243/262 (92%)
 Strand = Plus / Minus

                                                                         
Query: 200   cgagggctcgccagcaagctacctatccatctgatcctcctagcatctggggaagaggca 259
             |||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 11353 cgagcgctcaccaacaagctacctatccatctgctcctcctggcatctggggaagaggca 11294

                                                                         
Query: 260   cgatcccctcccaatcacggcggttagaacagtctcggaccgttgcccgtcgcttcgctc 319
             ||||||||||||| ||| |||| || || ||| ||||  |||||||||||||||||||||
Sbjct: 11293 cgatcccctcccagtcatggcgcttggagcagcctcgcgccgttgcccgtcgcttcgctc 11234

                                                                         
Query: 320   acaatccacgagctcactggagttctctttttgccttgtaacaaacagctgctggttctt 379
             || |||||||||||| |||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 11233 acgatccacgagctctctggagttctctctttgccttgtaacaagccgctgctggttctt 11174

                                                                         
Query: 380   actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtg 439
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11173 actctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgcg 11114

                                   
Query: 440   gcctgttgtcatgcggatgttc 461
             ||||||||||||||||||||||
Sbjct: 11113 gcctgttgtcatgcggatgttc 11092



 Score =  133 bits (67), Expect = 7e-28
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                         
Query: 461   cggntgtgaagtagtcgacatcatgatcaagcctgctgaatccaccaaagagtgcatcat 520
             ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11003 cggttgtgaagtagtcgacatcatgatcaagcctgctgaatccaccaaagagtgcatcgt 10944

                               
Query: 521   cagagtctaaggccacct 538
             ||||||| ||||||||||
Sbjct: 10943 cagagtccaaggccacct 10926



 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 8/115 (6%)
 Strand = Plus / Minus

                                                                         
Query: 73    agcgcacgggcaattattagtttatatgtacataaacaaccgggaatgtgagagat---a 129
             |||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||   |
Sbjct: 11461 agcgcacgggcaattattagtt-atatgtacaaaaacaaccgggaatgtgcaagatagga 11403

                                                                    
Query: 130   ggatggttcagtgcagcactacaaaatgtcacccaggcccgtccattttctttcg 184
             ||| ||||||||||||||| |||||    ||||||||||||||||||||||||||
Sbjct: 11402 ggagggttcagtgcagcacaacaaa----cacccaggcccgtccattttctttcg 11352
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>gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full insert mRNA sequence
          Length = 2549

 Score =  343 bits (173), Expect = 4e-91
 Identities = 196/204 (96%)
 Strand = Plus / Minus

                                                                        
Query: 342  ttctctttttgccttgtaacaaacagctgctggttcttactctgtaagggcatacacgac 401
            |||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 2549 ttctctctttgccttgtaacaagccgctgctggttcttactctgtaagggcatacacgac 2490

                                                                        
Query: 402  cgcagttctgctcggagtgtacaccgagaaagagcgtggcctgttgtcatgcggatgttc 461
            |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2489 cgcagttctgctaggagtgtacaccgagaaagagcgtggcctattgtcatgcggatgttc 2430

                                                                        
Query: 462  ggntgtgaagtagtcgacatcatgatcaagcctgctgaatccaccaaagagtgcatcatc 521
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2429 ggttgtgaagtagtcgacatcatgatcaagcctgctgaatccaccaaagagtgcatcgtc 2370

                                    
Query: 522  agagtctaaggccaccttgtactt 545
             |||||||||||||||||||||||
Sbjct: 2369 ggagtctaaggccaccttgtactt 2346
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>dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rbe4, complete cds
          Length = 3015

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctctgtaagggcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtgg 440
            ||||||||| ||||||||||| || |||||||| || |||||||||||||| || | |||
Sbjct: 2648 ctctgtaagtgcatacacgacggcggttctgcttggggtgtacaccgagaatgaacatgg 2589

                                                                        
Query: 441  cctgttgtcatgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctgaa 500
             ||||||||||||||    || |  |||||||| ||  |||||||||||||||  |||||
Sbjct: 2588 tctgttgtcatgcggccagtcagcagtgaagtactcagcatcatgatcaagccgactgaa 2529

                        
Query: 501  tccaccaaagag 512
            ||||||||||||
Sbjct: 2528 tccaccaaagag 2517
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>gb|AY740401.1| Triticum aestivum starch branching enzyme IIb (SBE IIb) mRNA,
            complete cds
          Length = 2860

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 499  aatccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||| || | || ||||||||| |||||||||||||
Sbjct: 2470 aatccaccaaagagtccagcgtccgagtctaagaccaccttgtactt 2424



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 406  gttctgctcggagtgtacaccgagaaagagcgtggcctgttgtcatg 452
            |||||||| ||||||||||| ||||| ||  | ||||||||||||||
Sbjct: 2563 gttctgctaggagtgtacactgagaatgaatggggcctgttgtcatg 2517
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>gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a) mRNA, partial cds
          Length = 2795

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                        
Query: 391  gcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtggcctgttgtca 450
            ||||| ||||| || |||||||| || |  || ||||||||||| |  ||||||||||||
Sbjct: 2421 gcatatacgacggctgttctgctgggtgcatagaccgagaaagaacacggcctgttgtca 2362

                                                                    
Query: 451  tgcggatgttcggntgtgaagtagtcgacatcatgatcaagcctgctgaatccacc 506
            |||||    || |  |||||||| ||| |||||||||||||||  || ||||||||
Sbjct: 2361 tgcggccagtcagcagtgaagtactcggcatcatgatcaagccgactaaatccacc 2306
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>gb|AF064561.1|AF064561 Hordeum vulgare cultivar Bomi starch branching enzyme IIb (sbeIIb)
            mRNA, nuclear gene encoding plastid protein, complete cds
          Length = 2780

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 406  gttctgctcggagtgtacaccgagaaagagcgtggcctgttgtcatg 452
            |||||||| ||||||||||| ||||| ||  | ||||||||||||||
Sbjct: 2468 gttctgctaggagtgtacactgagaacgaatggggcctgttgtcatg 2422



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 499  aatccaccaaagagtgcatcatcagagtctaaggccaccttgtactt 545
            ||||||||||||||| || | || ||||||||  |||||||||||||
Sbjct: 2375 aatccaccaaagagtccagcgtctgagtctaacaccaccttgtactt 2329
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>ref|XM_466059.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2478

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 499  aatccaccaaagagtgcatcatcagagtctaaggccacctt 539
            ||||||||||||||| || |||| ||||| ||| |||||||
Sbjct: 2357 aatccaccaaagagtccagcatctgagtccaagaccacctt 2317
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>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence
          Length = 172393

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    ttattagtttatatgtacata 106
             |||||||||||||||||||||
Sbjct: 86061 ttattagtttatatgtacata 86041
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>ref|NM_137701.2| Drosophila melanogaster CG4030-RA (CG4030), mRNA
          Length = 2320

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  ttattagtttatatgtacata 106
           |||||||||||||||||||||
Sbjct: 52  ttattagtttatatgtacata 32
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>gb|AY061312.1| Drosophila melanogaster LD23155 full length cDNA
          Length = 2311

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  ttattagtttatatgtacata 106
           |||||||||||||||||||||
Sbjct: 27  ttattagtttatatgtacata 7
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>gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, complete sequence
          Length = 155537

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      agttctgctaaaatataggca 27
              |||||||||||||||||||||
Sbjct: 120783 agttctgctaaaatataggca 120763
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>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence
          Length = 120298

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      agttctgctaaaatataggca 27
              |||||||||||||||||||||
Sbjct: 101217 agttctgctaaaatataggca 101237
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>dbj|AK108535.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-C07, full
           insert sequence
          Length = 837

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 499 aatccaccaaagagtgcatcatcagagtctaaggccacctt 539
           ||||||||||||||| || |||| ||||| ||| |||||||
Sbjct: 424 aatccaccaaagagtccagcatctgagtccaagaccacctt 384
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>gb|AY109521.1| Zea mays CL1245_1 mRNA sequence
          Length = 2766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 391  gcatacacgaccgcagttctgctcggagtgtacaccgagaaagagcgtggcctgttgtca 450
            ||||| ||||| || |||||||| || |  || ||||||||||| |  ||||||||||||
Sbjct: 2421 gcatatacgacggctgttctgctgggtgcatagaccgagaaagaacacggcctgttgtca 2362

                 
Query: 451  tgcgg 455
            |||||
Sbjct: 2361 tgcgg 2357
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>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the
            complete sequence
          Length = 305143

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   ttattagtttatatgtacata 106
            |||||||||||||||||||||
Sbjct: 2700 ttattagtttatatgtacata 2720
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>gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, complete sequence
          Length = 228551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   agctcactggagttctctttt 350
             |||||||||||||||||||||
Sbjct: 85354 agctcactggagttctctttt 85374
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>gb|AC102529.18| Mus musculus chromosome 1, clone RP23-36G3, complete sequence
          Length = 210575

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    agctcactggagttctctttt 350
              |||||||||||||||||||||
Sbjct: 191571 agctcactggagttctctttt 191591
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>dbj|D16201.1|RICBCE3 Oryza sativa mRNA for branching enzyme-3, complete cds
          Length = 2918

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 499  aatccaccaaagagtgcatcatcagagtctaaggccacctt 539
            ||||||||||||||| || |||| ||||| ||| |||||||
Sbjct: 2484 aatccaccaaagagtccagcatctgagtccaagaccacctt 2444
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>gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205)) DNA sequence, complete
             sequence
          Length = 80993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    ttattagtttatatgtacata 106
             |||||||||||||||||||||
Sbjct: 49971 ttattagtttatatgtacata 49951
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>gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome 7, complete
            sequence
          Length = 190553

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   gtttatatgtacataaacaa 111
            ||||||||||||||||||||
Sbjct: 6326 gtttatatgtacataaacaa 6345
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>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence
          Length = 160031

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gaatgtgagagataggatgg 135
              ||||||||||||||||||||
Sbjct: 102898 gaatgtgagagataggatgg 102917
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>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aatatttatgtccaagttga 72
             ||||||||||||||||||||
Sbjct: 62839 aatatttatgtccaagttga 62820
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>emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on chromosome 13q22.3-31.3,
             complete sequence
          Length = 147978

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaataaagttctgctaaaat 20
             ||||||||||||||||||||
Sbjct: 25273 aaataaagttctgctaaaat 25254
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>gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome 7, complete sequence
          Length = 265770

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gtttatatgtacataaacaa 111
             ||||||||||||||||||||
Sbjct: 60879 gtttatatgtacataaacaa 60860
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>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3,
             complete sequence
          Length = 103014

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    attagaatatttatgtccaagttg 71
             |||| |||||||||||||||||||
Sbjct: 44261 attaaaatatttatgtccaagttg 44238
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>dbj|AK088955.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430033K04
            product:unclassifiable, full insert sequence
          Length = 3339

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaataaagttctgctaaaat 20
            ||||||||||||||||||||
Sbjct: 3124 aaataaagttctgctaaaat 3143
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>gb|AY235417.1| Zea mays subsp. mays cultivar NC348 amylose extender starch-branching
            enzyme (ae1) gene, exons 19 through 22 and partial cds
          Length = 1401

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 492  cctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttgtac 543
            |||||||||||||||||| ||| || | || ||||| ||| |||||| ||||
Sbjct: 1057 cctgctgaatccaccaaatagtccagcgtcggagtccaagaccacctggtac 1006
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>gb|AY235412.1| Zea mays subsp. mays cultivar KI3 amylose extender starch-branching
            enzyme (ae1) gene, exons 19 through 22 and partial cds
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 492  cctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttgtac 543
            |||||||||||||||||| ||| || | || ||||| ||| |||||| ||||
Sbjct: 1056 cctgctgaatccaccaaatagtccagcgtcggagtccaagaccacctggtac 1005
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>gb|AY235406.1| Zea mays subsp. mays cultivar EP1 amylose extender starch-branching
            enzyme (ae1) gene, exons 19 through 22 and partial cds
          Length = 1618

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 492  cctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttgtac 543
            |||||||||||||||||| ||| || | || ||||| ||| |||||| ||||
Sbjct: 1274 cctgctgaatccaccaaatagtccagcgtcggagtccaagaccacctggtac 1223
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>gb|AY235403.1| Zea mays subsp. mays cultivar CML258 amylose extender
            starch-branching enzyme (ae1) gene, exons 19 through 22
            and partial cds
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 492  cctgctgaatccaccaaagagtgcatcatcagagtctaaggccaccttgtac 543
            |||||||||||||||||| ||| || | || ||||| ||| |||||| ||||
Sbjct: 1056 cctgctgaatccaccaaatagtccagcgtcggagtccaagaccacctggtac 1005
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 499      aatccaccaaagagtgcatcatcagagtctaaggccacct 538
                ||||||||||||||| || |||| ||||| ||| ||||||
Sbjct: 19375696 aatccaccaaagagtccagcatctgagtccaagaccacct 19375735
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>gb|AC012363.6| Homo sapiens BAC clone RP11-438O12 from 2, complete sequence
          Length = 217346

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      agttctgctaaaatataggc 26
              ||||||||||||||||||||
Sbjct: 118238 agttctgctaaaatataggc 118219
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     tagaatatttatgtccaagttgaa 73
              |||||||||| |||||||||||||
Sbjct: 266924 tagaatatttttgtccaagttgaa 266947
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>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0475F05
          Length = 147522

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 499   aatccaccaaagagtgcatcatcagagtctaaggccacct 538
             ||||||||||||||| || |||| ||||| ||| ||||||
Sbjct: 61187 aatccaccaaagagtccagcatctgagtccaagaccacct 61226
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 499    aatccaccaaagagtgcatcatcagagtctaaggccacct 538
              ||||||||||||||| || |||| ||||| ||| ||||||
Sbjct: 143494 aatccaccaaagagtccagcatctgagtccaagaccacct 143533
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>emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in linkage group 20,
             complete sequence
          Length = 42367

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tcagtgcagcactacaaaat 156
             ||||||||||||||||||||
Sbjct: 28172 tcagtgcagcactacaaaat 28191
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>gb|DQ152827.1| Platanus x acerifolia clone pac-47 NPR1-like protein mRNA, partial
           cds
          Length = 734

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 catcatcagagtctaaggcc 534
           ||||||||||||||||||||
Sbjct: 428 catcatcagagtctaaggcc 409
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>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete
              sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaataaagttctgctaaaat 20
              ||||||||||||||||||||
Sbjct: 130186 aaataaagttctgctaaaat 130205
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>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete
              sequence
          Length = 208805

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    cttgtaacaaacagctgctg 373
              ||||||||||||||||||||
Sbjct: 133383 cttgtaacaaacagctgctg 133402


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,323,128
Number of Sequences: 3902068
Number of extensions: 4323128
Number of successful extensions: 74665
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74546
Number of HSP's gapped (non-prelim): 108
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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