>ref|NM_191456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3585

 Score =  168 bits (85), Expect = 1e-38
 Identities = 136/153 (88%)
 Strand = Plus / Minus

                                                                        
Query: 434  ctctctttctcttagcttcttgctaagttcttctttcgacggtagtttccagccaccctt 493
            ||||||||||| ||||||| |  | |||||||||| ||| || ||||||||||||| |||
Sbjct: 3570 ctctctttctcgtagcttcgtattgagttcttcttgcgaaggcagtttccagccactctt 3511

                                                                        
Query: 494  catggcagcagaccaccacgccttcagctcgtcctcatggaagccatggttggatacaaa 553
            ||||||||| |||||||| ||||||||||| ||||  |||||| ||||||||||||||||
Sbjct: 3510 catggcagctgaccaccatgccttcagctcatcctggtggaagtcatggttggatacaaa 3451

                                             
Query: 554  acgagaatctacttggcaggttgaattcctgat 586
             ||||||||||||||||| ||||||||||||||
Sbjct: 3450 gcgagaatctacttggcaagttgaattcctgat 3418

>dbj|AK101217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031C11, full
            insert sequence
          Length = 3122

 Score =  168 bits (85), Expect = 1e-38
 Identities = 136/153 (88%)
 Strand = Plus / Minus

                                                                        
Query: 434  ctctctttctcttagcttcttgctaagttcttctttcgacggtagtttccagccaccctt 493
            ||||||||||| ||||||| |  | |||||||||| ||| || ||||||||||||| |||
Sbjct: 2697 ctctctttctcgtagcttcgtattgagttcttcttgcgaaggcagtttccagccactctt 2638

                                                                        
Query: 494  catggcagcagaccaccacgccttcagctcgtcctcatggaagccatggttggatacaaa 553
            ||||||||| |||||||| ||||||||||| ||||  |||||| ||||||||||||||||
Sbjct: 2637 catggcagctgaccaccatgccttcagctcatcctggtggaagtcatggttggatacaaa 2578

                                             
Query: 554  acgagaatctacttggcaggttgaattcctgat 586
             ||||||||||||||||| ||||||||||||||
Sbjct: 2577 gcgagaatctacttggcaagttgaattcctgat 2545



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 317  atgcttgcatcgctggcgttt 337
            |||||||||||||||||||||
Sbjct: 2820 atgcttgcatcgctggcgttt 2800

>gb|BT018258.1| Zea mays clone EL01T0201H08.c mRNA sequence
          Length = 699

 Score =  167 bits (84), Expect = 5e-38
 Identities = 117/128 (91%)
 Strand = Plus / Plus

                                                                       
Query: 459 agttcttctttcgacggtagtttccagccacccttcatggcagcagaccaccacgccttc 518
           |||||||| ||||||||||| |||||  |||||||||| |||||||||||||| ||||||
Sbjct: 303 agttcttccttcgacggtagcttccactcacccttcatagcagcagaccaccatgccttc 362

                                                                       
Query: 519 agctcgtcctcatggaagccatggttggatacaaaacgagaatctacttggcaggttgaa 578
           ||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 363 agctcatcctcatggaagtcatggttggatacaaagcgagaatctacttgacaggttgaa 422

                   
Query: 579 ttcctgat 586
           || |||||
Sbjct: 423 tttctgat 430

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 434      ctctctttctcttagcttcttgctaagttcttctttcgacggtagtttccagccaccctt 493
                ||||||||||| ||||||| |  | |||||||||| ||| || ||||||||||||| |||
Sbjct: 32752840 ctctctttctcgtagcttcgtattgagttcttcttgcgaaggcagtttccagccactctt 32752899

                                                   
Query: 494      catggcagcagaccaccacgccttcagctcgtcct 528
                ||||||||| |||||||| ||||||||||| ||||
Sbjct: 32752900 catggcagctgaccaccatgccttcagctcatcct 32752934



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 531      tggaagccatggttggatacaaaacgagaatctacttggcaggttgaattcctgat 586
                |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 32753089 tggaagtcatggttggatacaaagcgagaatctacttggcaagttgaattcctgat 32753144



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 317      atgcttgcatcgctggcgttt 337
                |||||||||||||||||||||
Sbjct: 32752717 atgcttgcatcgctggcgttt 32752737

>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0490D09
          Length = 154430

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                          
Query: 434    ctctctttctcttagcttcttgctaagttcttctttcgacggtagtttccagccaccctt 493
              ||||||||||| ||||||| |  | |||||||||| ||| || ||||||||||||| |||
Sbjct: 115635 ctctctttctcgtagcttcgtattgagttcttcttgcgaaggcagtttccagccactctt 115694

                                                 
Query: 494    catggcagcagaccaccacgccttcagctcgtcct 528
              ||||||||| |||||||| ||||||||||| ||||
Sbjct: 115695 catggcagctgaccaccatgccttcagctcatcct 115729



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                      
Query: 531    tggaagccatggttggatacaaaacgagaatctacttggcaggttgaattcctgat 586
              |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 115884 tggaagtcatggttggatacaaagcgagaatctacttggcaagttgaattcctgat 115939



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    atgcttgcatcgctggcgttt 337
              |||||||||||||||||||||
Sbjct: 115512 atgcttgcatcgctggcgttt 115532

>gb|AY111400.1| Zea mays CL3532_1 mRNA sequence
          Length = 1393

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 459 agttcttctttcgacggtagtttccagccacccttcatggcagcagaccaccacgccttc 518
           |||||||| ||||||||||| |||||  |||||||||| |||||||||||||| ||||||
Sbjct: 412 agttcttccttcgacggtagcttccactcacccttcatagcagcagaccaccatgccttc 471

                     
Query: 519 agctcgtcct 528
           ||||| ||||
Sbjct: 472 agctcatcct 481



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 555 cgagaatctacttggcaggttgaattcctgat 586
           |||||||||||||| ||||||||||| |||||
Sbjct: 508 cgagaatctacttgacaggttgaatttctgat 539



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 134 cttcctatttacagataggat 154
           |||||||||||||||||||||
Sbjct: 83  cttcctatttacagataggat 103

>emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chromosome 11, complete
            sequence
          Length = 124112

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 443  tcttagcttcttgctaagttcttcttt 469
            |||||||||| ||||||||||||||||
Sbjct: 5243 tcttagcttcctgctaagttcttcttt 5217

>dbj|AK036184.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630044I16
           product:unclassifiable, full insert sequence
          Length = 2285

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 443 tcttagcttcttgctaagttcttcttt 469
           |||||||||| ||||||||||||||||
Sbjct: 820 tcttagcttcctgctaagttcttcttt 794

>gb|AC105357.7| Homo sapiens chromosome 11, clone RP11-321F11, complete sequence
          Length = 167772

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 425    atgaagtaactctctttctct 445
              |||||||||||||||||||||
Sbjct: 101778 atgaagtaactctctttctct 101758

>ref|NM_142158.1| Drosophila melanogaster CG6966-RA (CG6966), mRNA
          Length = 2734

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 15   tagtacaagtacatacaatat 35
            |||||||||||||||||||||
Sbjct: 2491 tagtacaagtacatacaatat 2471

>gb|AY084101.1| Drosophila melanogaster AT05246 full insert cDNA
          Length = 1281

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 15   tagtacaagtacatacaatat 35
            |||||||||||||||||||||
Sbjct: 1020 tagtacaagtacatacaatat 1000

>gb|AC009457.8|AC009457 Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone
              BACR25A06, complete sequence
          Length = 170163

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     tagtacaagtacatacaatat 35
              |||||||||||||||||||||
Sbjct: 106568 tagtacaagtacatacaatat 106588

>gb|AE003707.2| Drosophila melanogaster chromosome 3R, section 45 of 118 of the complete
              sequence
          Length = 228284

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     tagtacaagtacatacaatat 35
              |||||||||||||||||||||
Sbjct: 112409 tagtacaagtacatacaatat 112429

>dbj|AP006442.2| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-105F10, complete
             sequence
          Length = 134532

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 425   atgaagtaactctctttctct 445
             |||||||||||||||||||||
Sbjct: 32061 atgaagtaactctctttctct 32041

>gb|BT001887.1| Drosophila melanogaster SD14914 full insert cDNA
          Length = 3444

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 15   tagtacaagtacatacaatat 35
            |||||||||||||||||||||
Sbjct: 3182 tagtacaagtacatacaatat 3162

>ref|NM_121673.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding
            AT5G16680 mRNA, complete cds
          Length = 4166

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 434  ctctctttctcttagcttcttgct 457
            |||| |||||||||||||||||||
Sbjct: 1332 ctctttttctcttagcttcttgct 1309

>gb|AC101763.8| Mus musculus chromosome 1, clone RP24-468E2, complete sequence
          Length = 143657

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   aagtaactctctttctctta 447
             ||||||||||||||||||||
Sbjct: 44260 aagtaactctctttctctta 44279

>gb|AY489416.1| Neodrepanis coruscans FMNH 8049 beta-fibrinogen gene, intron 7
          Length = 850

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 11 tgtctagtacaagtacatac 30
          ||||||||||||||||||||
Sbjct: 20 tgtctagtacaagtacatac 1

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 568     ggcaggttgaattcctgatc 587
               ||||||||||||||||||||
Sbjct: 3955118 ggcaggttgaattcctgatc 3955137

>gb|AC113081.8| Mus musculus chromosome 9, clone RP23-291B23, complete sequence
          Length = 217420

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   cttcatggcagcagaccacc 510
             ||||||||||||||||||||
Sbjct: 61190 cttcatggcagcagaccacc 61171

>emb|AL590229.3| Human DNA sequence from clone RP11-192B18 on chromosome Xq21.1-21.33,
            complete sequence
          Length = 171847

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  ctcttagcttcttgctaagt 461
            ||||||||||||||||||||
Sbjct: 5111 ctcttagcttcttgctaagt 5130

>emb|AL136125.5| Human DNA sequence from clone RP1-304B14 on chromosome 6 Contains the
             3' end of the C6orf33 gene for chromosome 6 open reading
             frame 33 (LMPB1 FLJ32521), a novel FLJ10466 containing
             gene, a novel gene and a CpG island, complete sequence
          Length = 83714

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   gaagtaactctctttctctt 446
             ||||||||||||||||||||
Sbjct: 44913 gaagtaactctctttctctt 44932

>ref|XM_785070.1| PREDICTED: Strongylocentrotus purpuratus similar to Hypothetical
            UPF0120 protein DKFZp564C186 homolog (LOC585237), mRNA
          Length = 2835

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 432  aactctctttctcttagcttcttg 455
            |||||||||||||| |||||||||
Sbjct: 1928 aactctctttctctcagcttcttg 1905

>emb|AL390218.1|NCB7N4 Neurospora crassa DNA linkage group II BAC clone B7N4
          Length = 41750

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   cagcagaccaccacgccttc 518
             ||||||||||||||||||||
Sbjct: 36732 cagcagaccaccacgccttc 36751

>gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome 9, complete
            sequence
          Length = 148736

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 491  cttcatggcagcagaccacc 510
            ||||||||||||||||||||
Sbjct: 7842 cttcatggcagcagaccacc 7861

>gb|AY395617.1| Lanius collurio voucher NRM 986403 fibrinogen gene, intron 7
          Length = 918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 11 tgtctagtacaagtacatac 30
          ||||||||||||||||||||
Sbjct: 25 tgtctagtacaagtacatac 6

>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence
          Length = 163790

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ccatctcttattctaagtat 89
             ||||||||||||||||||||
Sbjct: 79538 ccatctcttattctaagtat 79557

>gb|AY827403.1| Criniger bres beta-fibrinogen (beta-fibrinogen) gene, intron 7 and
           partial cds
          Length = 967

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  tgtctagtacaagtacatac 30
           ||||||||||||||||||||
Sbjct: 904 tgtctagtacaagtacatac 923

>emb|CR956631.17| M.truncatula DNA sequence from clone MTH2-65L9 on chromosome 3,
             complete sequence
          Length = 126227

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   aacctcaatccctcaatataccaa 227
             |||||| |||||||||||||||||
Sbjct: 65538 aacctccatccctcaatataccaa 65561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,156,819
Number of Sequences: 3902068
Number of extensions: 5156819
Number of successful extensions: 117356
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117262
Number of HSP's gapped (non-prelim): 94
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)