ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5o07 |
|---|---|
| Clone Library Name | barley_pub |
>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 171 bits (433), Expect = 2e-42 Identities = 93/145 (64%), Positives = 108/145 (74%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIAADEKRHETAYTK + F + D + + ++H+ + G+ L Sbjct: 248 ICGTIAADEKRHETAYTKIVEKLF--EIDPDYTVLAFADMMRNKISMTAHLMYDGKDDNL 305 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 +VAQRLGVYT +DYAD+LEFLVQRWKVAD+TGLSGEGRRAQD+VCTLA R RRLD Sbjct: 306 FEHLSAVAQRLGVYTVRDYADMLEFLVQRWKVADLTGLSGEGRRAQDFVCTLAPRIRRLD 365 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQARAKQ PV+PFSWVYDRKVQL Sbjct: 366 ERAQARAKQAPVIPFSWVYDRKVQL 390
>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 163 bits (413), Expect = 4e-40 Identities = 90/145 (62%), Positives = 105/145 (72%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIA+DEKRHETAYTK + F G + D + +H+ + GR L Sbjct: 254 ICGTIASDEKRHETAYTKIVEKLF--EIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNL 311 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEFLV RWKVAD+TGLSGEGR+AQDYVC L R RRL+ Sbjct: 312 FEHFSAVAQRLGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLPPRIRRLE 371 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ RAK+GPVVPFSW++DR+V+L Sbjct: 372 ERAQGRAKEGPVVPFSWIFDRQVKL 396
>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 159 bits (403), Expect = 6e-39 Identities = 87/145 (60%), Positives = 103/145 (71%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIAADEKRHETAYTK + F G + D + +H+ + GR L Sbjct: 256 ICGTIAADEKRHETAYTKIVEKLF--EIDPDGTVMAFADMMRKKISMPAHLMYDGRDESL 313 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + SVAQRLGVYTAKDYADILEFLV RWK+ +TGLSGEG +AQ+Y+C L R RRLD Sbjct: 314 FDNFSSVAQRLGVYTAKDYADILEFLVGRWKIESLTGLSGEGNKAQEYLCGLTPRIRRLD 373 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQARAK+GP VPFSW++DR+VQL Sbjct: 374 ERAQARAKKGPKVPFSWIHDREVQL 398
>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 155 bits (392), Expect = 1e-37 Identities = 84/145 (57%), Positives = 101/145 (69%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTI ADEKRHETAYTK + F G I + + +H+ + GR L Sbjct: 254 ICGTITADEKRHETAYTKIVEKLF--EIDPEGTVIAFEEMMRKKVSMPAHLMYDGRDDNL 311 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEFLV RWKV +TGLSGEG++AQDYVC L R R+L+ Sbjct: 312 FHHFSAVAQRLGVYTAKDYADILEFLVGRWKVESLTGLSGEGQKAQDYVCALPARIRKLE 371 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ RAK+GP +PFSW++DR+V+L Sbjct: 372 ERAQGRAKEGPTIPFSWIFDRQVKL 396
>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,| chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 154 bits (389), Expect = 3e-37 Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIAADEKRHETAYTK + G + D + +H+ + GR L Sbjct: 257 ICGTIAADEKRHETAYTKIVEKLL--EIDPDGTVVAFADMMRKKISMPAHLMYDGRDDNL 314 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + SVAQRLGVYTAKDYADILEFL RW++ +TGLSGEG +AQ+Y+C L R RRLD Sbjct: 315 FDNFSSVAQRLGVYTAKDYADILEFLAGRWRIESLTGLSGEGNKAQEYLCGLTPRIRRLD 374 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQARAK+GP +PFSW++DR+VQL Sbjct: 375 ERAQARAKKGPKIPFSWIHDREVQL 399
>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 152 bits (385), Expect = 8e-37 Identities = 86/145 (59%), Positives = 102/145 (70%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 +CG IAADEKRHETAYTK + F G + D + +H+ + GR L Sbjct: 254 MCGIIAADEKRHETAYTKIVEKLF--EIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNL 311 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + S VAQRLGVYTAKDYADILEFLV RWKVAD+TGLSGEGR+AQDYVC LA R RRL+ Sbjct: 312 FENFSAVAQRLGVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLAPRIRRLE 371 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ER ARAK+ VPFSW++DR+V+L Sbjct: 372 ERNSARAKESVNVPFSWIFDREVKL 396
>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) Length = 396 Score = 151 bits (381), Expect = 2e-36 Identities = 84/145 (57%), Positives = 100/145 (68%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIAADEKRHETAYTK + F G + D + +H+ + GR L Sbjct: 254 ICGTIAADEKRHETAYTKIVEKLF--EIDPDGTVLAFADMMRKKISMPAHLMYDGRDDNL 311 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEFLV RWKV +TGLS EG++AQDYVC L R RRL+ Sbjct: 312 FDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLE 371 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ RAK+ P +PFSW++DR+V+L Sbjct: 372 ERAQGRAKEAPTMPFSWIFDRQVKL 396
>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 149 bits (375), Expect = 1e-35 Identities = 82/145 (56%), Positives = 101/145 (69%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICGTIA+DEKRHETAYTK + F G + D + + +H+ + G+ L Sbjct: 251 ICGTIASDEKRHETAYTKIVEKLF--EIDPDGTVLSFADMMKKKISMPAHLMYDGQDDNL 308 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGV TAKDYADILEFL+ RWKV ++TG SGEG+RAQD+VCTLA R RR++ Sbjct: 309 FEHFSAVAQRLGVDTAKDYADILEFLINRWKVGELTGFSGEGKRAQDFVCTLAPRIRRIE 368 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ RAKQ P +P SW+Y R+VQL Sbjct: 369 ERAQERAKQAPRIPCSWIYGREVQL 393
>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 144 bits (364), Expect = 2e-34 Identities = 79/145 (54%), Positives = 97/145 (66%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG IAADEKRHETAYTK + F G + D + +H+ + G+ L Sbjct: 248 ICGIIAADEKRHETAYTKIVEKLF--EIDPDGTVLALADMMRKKVSMPAHLMYDGQDDNL 305 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + SVAQRLGVYTAKDYADILEFLV RW + +TGLSGEGR+AQDYVCTL R RRL+ Sbjct: 306 FENFSSVAQRLGVYTAKDYADILEFLVGRWDIEKLTGLSGEGRKAQDYVCTLPPRIRRLE 365 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ+R K+ PFSW++ R++ L Sbjct: 366 ERAQSRVKKASATPFSWIFGREINL 390
>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 411 Score = 144 bits (363), Expect = 3e-34 Identities = 79/142 (55%), Positives = 97/142 (68%), Gaps = 1/142 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG IA+DEKRHETAYTK + F S G + D A +H+ + GR L Sbjct: 249 ICGMIASDEKRHETAYTKIVEKLF--ESDPDGTVMAFADMMRKKIAMPAHLMYDGRDDNL 306 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + SVAQR+GVYTAKDYADILEFLV RWKV +TGLSGEGR+AQ+Y+C L R RRL+ Sbjct: 307 FDNYSSVAQRIGVYTAKDYADILEFLVGRWKVEQLTGLSGEGRKAQEYICGLPPRIRRLE 366 Query: 362 ERAQARAKQGPVVPFSWVYDRK 297 ERAQAR K+ + FSW++DR+ Sbjct: 367 ERAQARVKESSTLKFSWIHDRE 388
>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 144 bits (362), Expect = 4e-34 Identities = 80/145 (55%), Positives = 100/145 (68%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG IA+DEKRHETAYTK + F + D + + +H+ + GR L Sbjct: 257 ICGIIASDEKRHETAYTKIVEKLF--EIDPDATVLAFADMMKKKISMPAHLMYDGRDDNL 314 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEFLV RW+V +TGLS EG++AQDYVC+L R RRL+ Sbjct: 315 FDHFSAVAQRLGVYTAKDYADILEFLVGRWEVEKLTGLSSEGQKAQDYVCSLPPRIRRLE 374 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERA+ RAKQ P +PFSW++DR+V+L Sbjct: 375 ERARERAKQAPSMPFSWIFDRQVKL 399
>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 142 bits (358), Expect = 1e-33 Identities = 80/145 (55%), Positives = 98/145 (67%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 +CG IAADEKRHETAYTK + F G + D + +H+ + GR L Sbjct: 251 VCGIIAADEKRHETAYTKIVEKLF--EVDPDGTVLAVADMMRKKISMPAHLMYDGRDDNL 308 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEFLV RW++ +TGLSGEG +A+DYVC LA R R+L+ Sbjct: 309 FEHFSTVAQRLGVYTAKDYADILEFLVGRWEIEKLTGLSGEGHKARDYVCGLAPRIRKLE 368 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQARAKQ VPFSWV+ + ++L Sbjct: 369 ERAQARAKQKAPVPFSWVFGKDIKL 393
>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 141 bits (356), Expect = 2e-33 Identities = 81/145 (55%), Positives = 98/145 (67%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG+IAADEKRHETAYTK + GA + D + +H+ + GR L Sbjct: 251 ICGSIAADEKRHETAYTKIVEKLL--EVDPDGAVLAIGDMMRKNISMPAHLMYDGRDDNL 308 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQRLGVYTAKDYADILEF V RW+V +TGLS EGRRAQDYVC LA R R+L+ Sbjct: 309 FEHFSAVAQRLGVYTAKDYADILEFHVGRWEVEKLTGLSSEGRRAQDYVCGLAPRIRKLE 368 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQARAK VPFSW++ ++++L Sbjct: 369 ERAQARAKHAKSVPFSWIFGKEIKL 393
>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 131 bits (329), Expect = 2e-30 Identities = 72/145 (49%), Positives = 99/145 (68%), Gaps = 1/145 (0%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 +CG IAADEKRHETAYTK + F GA + D + +H+ + G+ L Sbjct: 256 VCGIIAADEKRHETAYTKIVEKLF--EIDPDGAVLALADMMRKKVSMPAHLMYDGKDDNL 313 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + S VAQ++GVYTAKDYADILE LV RWKV ++ GLSGEG +AQD+VC LA R R+L Sbjct: 314 FENYSAVAQQIGVYTAKDYADILEHLVNRWKVENLMGLSGEGHKAQDFVCGLAPRIRKLG 373 Query: 362 ERAQARAKQGPVVPFSWVYDRKVQL 288 ERAQ+ +K +VPFSW++++++++ Sbjct: 374 ERAQSLSKPVSLVPFSWIFNKELKV 398
>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 397 Score = 129 bits (324), Expect = 9e-30 Identities = 75/146 (51%), Positives = 97/146 (66%), Gaps = 2/146 (1%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG+IA+DEKRHETAYTK + F + D + A + + GR L Sbjct: 254 ICGSIASDEKRHETAYTKIVEKLF--EIDPDETVLAFADMMKKKIAMPAEFIYDGRDYNL 311 Query: 539 STSGS-VAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 S VAQR+GVYTAKDY DI+E LV RWKV ++ GLS EGR+AQDY+C+L +R RRL+ Sbjct: 312 FDHYSAVAQRIGVYTAKDYVDIVEHLVDRWKVKELAGLSAEGRKAQDYLCSLPSRIRRLE 371 Query: 362 ERAQARAK-QGPVVPFSWVYDRKVQL 288 ERAQ +A+ PV PFSW++DR+V+L Sbjct: 372 ERAQEKAQGSTPVSPFSWIFDREVKL 397 Score = 63.9 bits (154), Expect = 5e-10 Identities = 30/38 (78%), Positives = 33/38 (86%) Frame = -1 Query: 667 KKVEKLFEIDPDYTVLAFADMMRKKISMPAHLMYDGED 554 K VEKLFEIDPD TVLAFADMM+KKI+MPA +YDG D Sbjct: 271 KIVEKLFEIDPDETVLAFADMMKKKIAMPAEFIYDGRD 308
>STAD_LINUS (P32062) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 123 bits (308), Expect = 6e-28 Identities = 76/146 (52%), Positives = 92/146 (63%), Gaps = 2/146 (1%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 ICG IAADEKRHETAYTK + F G + D + +H+ + G L Sbjct: 254 ICGIIAADEKRHETAYTKIVEKLF--EIDPDGTVLALADMMRKKISMPAHLMYDGEDDNL 311 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 + SVAQR+G TAKDYADILEFLV RWKV TGLSGEG +AQD+VC L R R+L+ Sbjct: 312 FDNYSSVAQRIGD-TAKDYADILEFLVGRWKVDAFTGLSGEGNKAQDFVCGLPARIRKLE 370 Query: 362 ERAQARAKQ-GPVVPFSWVYDRKVQL 288 ERA RAKQ VPFSW++ R++ L Sbjct: 371 ERAAGRAKQTSKSVPFSWIFSRELVL 396
>STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desaturase,| chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 385 Score = 109 bits (273), Expect = 7e-24 Identities = 61/144 (42%), Positives = 89/144 (61%), Gaps = 2/144 (1%) Frame = -3 Query: 719 ICGTIAADEKRHETAYTKES*EAF*NRS*LHGACIC*HDEEEDLNACSSHVRW*GRQTCL 540 +CG IA+DEKRH TAYTK + I D +H + G L Sbjct: 242 VCGNIASDEKRHATAYTKIVEKLA--EIDPDTTVIAFSDMMRKKIQMPAHAMYDGSDDML 299 Query: 539 STS-GSVAQRLGVYTAKDYADILEFLVQRWKVADVTGLSGEGRRAQDYVCTLATRFRRLD 363 +VAQ++GVY+A DY DI++FLV +W VA +TGLSGEGR+AQ+YVC+LA + RR++ Sbjct: 300 FKHFTAVAQQIGVYSAWDYCDIIDFLVDKWNVAKMTGLSGEGRKAQEYVCSLAAKIRRVE 359 Query: 362 ERAQARAKQGPV-VPFSWVYDRKV 294 E+ Q + K+ + V FSW+++R++ Sbjct: 360 EKVQGKEKKAVLPVAFSWIFNRQI 383 Score = 66.2 bits (160), Expect = 9e-11 Identities = 31/39 (79%), Positives = 33/39 (84%) Frame = -1 Query: 667 KKVEKLFEIDPDYTVLAFADMMRKKISMPAHLMYDGEDD 551 K VEKL EIDPD TV+AF+DMMRKKI MPAH MYDG DD Sbjct: 259 KIVEKLAEIDPDTTVIAFSDMMRKKIQMPAHAMYDGSDD 297
>LPXD_HELHP (Q7VH68) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase| (EC 2.3.1.-) Length = 326 Score = 33.5 bits (75), Expect = 0.67 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -2 Query: 420 GKTGTGLRVHLGDKIQAAGRKSTGK 346 G+ GTG +H+GD +Q AGR + GK Sbjct: 265 GQAGTGGHIHIGDFVQVAGRGAVGK 289
>ULK2_HUMAN (Q8IYT8) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) Length = 1036 Score = 32.0 bits (71), Expect = 2.0 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +1 Query: 418 PSPESPVTSATFHLWTKNSRMSA*SFAVYTPSRCA-TEPEVLKQVCRPHHRT*DEQALRS 594 P SPV + T T R+S S Y+PS T PE Q C H + D ++ S Sbjct: 449 PGSCSPVPADTAQ--TVGRRLSTGSSRPYSPSPLVGTIPEQFSQCCCGHPQGHDSRSRNS 506 Query: 595 SSSSCQQMQAPCS 633 S S Q Q+P S Sbjct: 507 SGSPVPQAQSPQS 519
>Y450_MYCPN (Q50362) Hypothetical protein MG315 homolog (H08_orf314)| Length = 314 Score = 30.4 bits (67), Expect = 5.7 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +3 Query: 156 CHPTTYRTAHKTFYPARKTYTVNRNAI**DRCSLI---NL-VVPSSLLELHFAVINPAEW 323 C P T +T H+ A KT +N N D + I NL V+ L +L +++PAE Sbjct: 121 CKPVTAKTIHQVISKAAKTLKLNLNPDLIDHLATILPFNLGVIEQELRKL--TLLSPAEL 178 Query: 324 NHRPLFRPCLCSF 362 + + LC + Sbjct: 179 QDKKMLEAVLCDY 191
>ULK2_MOUSE (Q9QY01) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) (Serine/threonine-protein kinase Unc51.2) Length = 1037 Score = 30.4 bits (67), Expect = 5.7 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +1 Query: 430 SPVTSATFHLWTKNSRMSA*SFAVYTPSRCA-TEPEVLKQVCRPHHRT*DEQALRSSSSS 606 SPV T T R+S S Y+PS T PE Q C H + + ++ SS S Sbjct: 453 SPVPGDTVQ--TGGRRLSTGSSRPYSPSPLVGTIPEQFSQCCCGHPQGHEARSRHSSGSP 510 Query: 607 CQQMQAPCS 633 Q QAP S Sbjct: 511 VPQTQAPQS 519
>GLRA1_HUMAN (P23415) Glycine receptor alpha-1 chain precursor (Glycine receptor| 48 kDa subunit) (Strychnine-binding subunit) Length = 449 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 219 EEKDLRYCTKHYNT-GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSW 267
>CR001_MOUSE (Q8BWJ4) Protein C18orf1 homolog| Length = 306 Score = 30.0 bits (66), Expect = 7.5 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Frame = +3 Query: 45 PCKLQRSHKIFNTTKGCNGALHGQPASHTSF------TSLFTHCHPTTYRTAHKTFYPAR 206 PC I T NG + G P +++ TS F H H T+R + F P Sbjct: 228 PCPPSSHSGISAATCSSNGRMEGPPPTYSEVMGHYPGTSFFHHQHSNTHRGSRPQFQPNN 287 Query: 207 KTYTV 221 T+ Sbjct: 288 SEGTI 292
>GLRA1_BRARE (O93430) Glycine receptor alphaZ1 chain precursor| Length = 444 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 215 EEKDLRYCTKHYNT-GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSW 263
>TDRD6_MOUSE (P61407) Tudor domain-containing protein 6| Length = 2134 Score = 30.0 bits (66), Expect = 7.5 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 5/44 (11%) Frame = +1 Query: 523 TEPEVLKQVCRPHH-----RT*DEQALRSSSSSCQQMQAPCSQD 639 TEP V+ QVC PH R+ ++ R S S Q +AP D Sbjct: 250 TEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQVYRAPVGTD 293
>GLRA3_HUMAN (O75311) Glycine receptor alpha-3 chain precursor| Length = 465 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 224 EEKDLRYCTKHYNT-GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSW 272
>GLRA1_RAT (P07727) Glycine receptor alpha-1 chain precursor (Glycine receptor| 48 kDa subunit) (Strychnine-binding subunit) Length = 457 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 219 EEKDLRYCTKHYNT-GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSW 267
>GLRA1_MOUSE (Q64018) Glycine receptor alpha-1 chain precursor (Glycine receptor| 48 kDa subunit) (Strychnine-binding subunit) Length = 457 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 219 EEKDLRYCTKHYNT-GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSW 267
>GLRA1_BOVIN (P57695) Glycine receptor alpha-1 chain precursor (Glycine receptor| 48 kDa subunit) (Strychnine-binding subunit) Length = 457 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 219 EEKDLRYCTKHYNT-GKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSW 267
>GLRA3_RAT (P24524) Glycine receptor alpha-3 chain precursor| Length = 464 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 224 EEKDLRYCTKHYNT-GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSW 272
>GLRA3_MOUSE (Q91XP5) Glycine receptor alpha-3 chain precursor| Length = 464 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 602 EEEDLNACSSHVRW*GRQTCLSTSGSVAQRLGVYTAKDYADILEFLVQRW 453 EE+DL C+ H G+ TC+ + +++G Y + Y L ++ W Sbjct: 224 EEKDLRYCTKHYNT-GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSW 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,815,085 Number of Sequences: 219361 Number of extensions: 2540565 Number of successful extensions: 6654 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 6293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6620 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
