ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5o06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736124.1| Triticum aestivum ADP-ribosylation factor mRNA, complete cds Length = 583 Score = 180 bits (91), Expect = 6e-43 Identities = 104/110 (94%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||||||| ||| ||| ||||||||||||||| Sbjct: 555 gttgctggacagccagtccaggccttcatacagtccctcccctgctgtagcacaagtgct 496 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 495 ctggatgtaccagtgtcgctggcgaagggagtgcaggccaagcttatcag 446
>ref|XM_470055.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1050 Score = 133 bits (67), Expect = 1e-28 Identities = 98/110 (89%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 658 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 599 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 598 ctggatataccagtgtcgctggcgaagggagtgcagtccaagcttatcag 549
>dbj|AK122007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111C09, full insert sequence Length = 897 Score = 133 bits (67), Expect = 1e-28 Identities = 98/110 (89%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 651 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 592 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 591 ctggatataccagtgtcgctggcgaagggagtgcagtccaagcttatcag 542
>dbj|AK105508.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E03, full insert sequence Length = 1445 Score = 133 bits (67), Expect = 1e-28 Identities = 98/110 (89%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 642 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 583 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 582 ctggatataccagtgtcgctggcgaagggagtgcagtccaagcttatcag 533
>ref|NM_186628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 117 bits (59), Expect = 7e-24 Identities = 96/110 (87%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 528 gttgctggacagccaatccaggccctcgtacagaccctcaccagttgtggcacaagtgct 469 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 468 ctggatgtaccagtgtcgctggcgaagggagtgcagtccaagcttatcag 419
>gb|BT016553.1| Zea mays clone Contig386 mRNA sequence Length = 634 Score = 101 bits (51), Expect = 4e-19 Identities = 94/110 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||| ||| || | | ||||||||||||||| Sbjct: 543 gttgctggacagccagtccaggccttcatacaatccctcacccgttgtagcacaagtgct 484 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 || |||||||| || | ||||||||| || ||||| ||||||||||||| Sbjct: 483 ttgaatgtaccaatgacgctggcgaagtgaatgcagtccaagcttatcag 434
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 101 bits (51), Expect = 4e-19 Identities = 94/110 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||| ||| || | | ||||||||||||||| Sbjct: 1256 gttgctggacagccagtccaggccttcatacaatccctcacccgttgtagcacaagtgct 1197 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 || |||||||| || | ||||||||| || ||||| ||||||||||||| Sbjct: 1196 ttgaatgtaccaatgacgctggcgaagtgaatgcagtccaagcttatcag 1147
>gb|BT017229.1| Zea mays clone EL01N0302G04.c mRNA sequence Length = 909 Score = 101 bits (51), Expect = 4e-19 Identities = 94/110 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||| ||| || | | ||||||||||||||| Sbjct: 646 gttgctggacagccagtccaggccttcatacaatccctcacccgttgtagcacaagtgct 587 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 || |||||||| || | ||||||||| || ||||| ||||||||||||| Sbjct: 586 ttgaatgtaccaatgacgctggcgaagtgaatgcagtccaagcttatcag 537
>gb|BT017034.1| Zea mays clone EL01N0202C08.c mRNA sequence Length = 1135 Score = 99.6 bits (50), Expect = 2e-18 Identities = 81/93 (87%) Strand = Plus / Plus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||||| || || | | ||| ||||||||||| Sbjct: 232 gttgctggacagccagtccaggccctcatacagaccctcgccagttgtggcacaagtgct 291 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtg 93 ||||||||||||||||| |||||| |||||||| Sbjct: 292 ctggatgtaccagtgtcgctggcgcagggagtg 324
>emb|X80042.1|ZMADPRF Z.mays mRNA for ADP-ribosylation factor Length = 695 Score = 93.7 bits (47), Expect = 1e-16 Identities = 93/110 (84%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||| ||| || | | ||||||||||||||| Sbjct: 636 gttgctggacagccagtccaggccttcatacaatccctcacccgttgtagcacaagtgct 577 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 || |||||||| || | ||||||||| || | ||| ||||||||||||| Sbjct: 576 ttgaatgtaccaatgacgctggcgaagtgaattcagtccaagcttatcag 527
>gb|AY104152.1| Zea mays PCO085488 mRNA sequence Length = 1096 Score = 93.7 bits (47), Expect = 1e-16 Identities = 93/110 (84%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||||| ||||| ||| || | | ||||||||||||||| Sbjct: 760 gttgctggacagccagtccaggccttcatacaatccctcacccgttgtagcacaagtgct 701 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 || |||||||| || | |||||||| || ||||| ||||||||||||| Sbjct: 700 ttgaatgtaccaatgacgttggcgaagtgaatgcagtccaagcttatcag 651
>dbj|D29691.1|RICYK3 Oryza sativa mRNA, sequence homologous to ADP-ribosylation factor gene Length = 391 Score = 79.8 bits (40), Expect = 2e-12 Identities = 87/103 (84%), Gaps = 1/103 (0%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 131 gttgctggacagccaatccaggccctcgtacagaccctcaccagttgtggcacaagtgct 72 Query: 61 ctggatgtaccagtgtcnctggc-gaagggagtgcaggccaag 102 ||||||||||||||||| ||||| ||||||||| ||| ||||| Sbjct: 71 ctggatgtaccagtgtcgctggcggaagggagttcagtccaag 29
>ref|NM_186630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 528 gttgctggacagccaatccaggccctcatacaaaccctcgccagttgtggcacaagtgct 469 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||| | ||| |||||||| || | ||||||||||||| Sbjct: 468 ctggatgtaccagtgacgctgacgaagggaatgtaatccaagcttatcag 419
>gb|BT016788.1| Zea mays clone Contig621 mRNA sequence Length = 976 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 ||||||||| || ||||| || || | ||||| ||||| | | ||||||||||||||| Sbjct: 653 gttgctggaaagccagtcaagcccctcatacaacccttcaccagatgtagcacaagtgct 594 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||| | ||| || ||||| ||||| |||||||| |||| Sbjct: 593 ctggatgtaccagtgccgctgtcgcagggaatgcagaccaagcttgtcag 544
>emb|AJ421017.1|GHI421017 Gossypium hirsutum mRNA for ADP-ribosylation factor (ARF1 gene) Length = 828 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| || | |||||| ||||| | | || |||||||| || Sbjct: 658 gttgttggaaagccagtccagtccctcatacagcccttcgccagaggtggcacaagtact 599 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||| | ||| ||||||||||| |||||||||||||||| Sbjct: 598 ctggatataccagtggcgctgacgaagggagtgaaggccaagcttatcag 549
>gb|AY217756.1| Gossypium hirsutum ADP-ribosylation factor 1 (ARF1) mRNA, complete cds Length = 1008 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| || | |||||| ||||| | | || |||||||| || Sbjct: 774 gttgttggaaagccagtccagtccctcatacagcccttcgccagaggtggcacaagtact 715 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||| | ||| ||||||||||| |||||||||||||||| Sbjct: 714 ctggatataccagtggcgctgacgaagggagtgaaggccaagcttatcag 665
>gb|AY217755.1| Gossypium hirsutum ARF1-like GTP-binding protein mRNA, complete cds Length = 1085 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| || | |||||| ||||| | | || |||||||| || Sbjct: 850 gttgttggaaagccagtccagtccctcatacagcccttcgccagaggtggcacaagtact 791 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||| | ||| ||||||||||| |||||||||||||||| Sbjct: 790 ctggatataccagtggcgctgacgaagggagtgaaggccaagcttatcag 741
>gb|AY197496.1| Gossypium hirsutum ADP-ribosylation factor 1 (ARF1) mRNA, complete cds Length = 1150 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| || | |||||| ||||| | | || |||||||| || Sbjct: 978 gttgttggaaagccagtccagtccctcatacagcccttcgccagaggtggcacaagtact 919 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||| |||||||| | ||| ||||||||||| |||||||||||||||| Sbjct: 918 ctggatataccagtggcgctgacgaagggagtgaaggccaagcttatcag 869
>gb|AY109003.1| Zea mays PCO085483 mRNA sequence Length = 752 Score = 77.8 bits (39), Expect = 6e-12 Identities = 57/62 (91%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 612 gtagcacatgtgctctggatgtaccagtg-ccgtggcgcagggagtgcaggccaagctta 554 Query: 107 tc 108 || Sbjct: 553 tc 552
>gb|AY104231.1| Zea mays PCO085486 mRNA sequence Length = 993 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 ||||||||| || ||||| || || | ||||| ||||| | | ||||||||||||||| Sbjct: 674 gttgctggaaagccagtcaagcccctcatacaacccttcaccagatgtagcacaagtgct 615 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||| | ||| || ||||| ||||| |||||||| |||| Sbjct: 614 ctggatgtaccagtgccgctgtcgcagggaatgcagaccaagcttgtcag 565
>gb|AF012896.1|AF012896 Oryza sativa ADP-ribosylation factor 1 (Os-ARF1) mRNA, complete cds Length = 840 Score = 77.8 bits (39), Expect = 6e-12 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 576 gttgctggacagccaatccaggccctcatacaaaccctcgccagttgtggcacaagtgct 517 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||||||| | ||| |||||||| || | ||||||||||||| Sbjct: 516 ctggatgtaccagtgacgctgacgaagggaatgtaatccaagcttatcag 467
>gb|BT013326.1| Lycopersicon esculentum clone 135047F, mRNA sequence Length = 818 Score = 75.8 bits (38), Expect = 2e-11 Identities = 55/61 (90%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||||||||||||||||||||| | ||| | ||||||||||| |||||||||||| Sbjct: 562 gcacaagtgctctggatgtaccagtgacgctgcctgagggagtgcagtccaagcttatca 503 Query: 110 g 110 | Sbjct: 502 g 502
>gb|AY239296.1| Gossypium barbadense ADP-ribosylation factor (arf1) mRNA, partial cds Length = 407 Score = 75.8 bits (38), Expect = 2e-11 Identities = 55/61 (90%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||| |||||||| |||||||| | ||| ||||||||||| ||||||||||||||| Sbjct: 314 gcacaagtactctggatataccagtggcgctgacgaagggagtgaaggccaagcttatca 255 Query: 110 g 110 | Sbjct: 254 g 254
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 9e-11 Identities = 42/44 (95%) Strand = Plus / Minus Query: 67 gtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 33705116 gtaccagtgtcgctggcgaagggagtgcagtccaagcttatcag 33705073 Score = 69.9 bits (35), Expect = 1e-09 Identities = 61/71 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 33705372 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 33705313 Query: 61 ctggatgtacc 71 |||||| |||| Sbjct: 33705312 ctggatatacc 33705302
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 73.8 bits (37), Expect = 9e-11 Identities = 42/44 (95%) Strand = Plus / Minus Query: 67 gtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 76485 gtaccagtgtcgctggcgaagggagtgcagtccaagcttatcag 76442 Score = 69.9 bits (35), Expect = 1e-09 Identities = 61/71 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 76741 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 76682 Query: 61 ctggatgtacc 71 |||||| |||| Sbjct: 76681 ctggatatacc 76671
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 9e-11 Identities = 42/44 (95%) Strand = Plus / Minus Query: 67 gtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 33795588 gtaccagtgtcgctggcgaagggagtgcagtccaagcttatcag 33795545 Score = 69.9 bits (35), Expect = 1e-09 Identities = 61/71 (85%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| ||||||||||| | |||| ||| || ||| ||||||||||||||| Sbjct: 33795844 gttgctggacagccagtccaggccctcgtacaatccctcacctgttgtagcacaagtgct 33795785 Query: 61 ctggatgtacc 71 |||||| |||| Sbjct: 33795784 ctggatatacc 33795774
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 4e-10 Identities = 41/43 (95%) Strand = Plus / Minus Query: 68 taccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 6843775 taccagtgtcgctggcgaagggagtgcagtccaagcttatcag 6843733 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 6857446 gttgctggacagccaatccaggccctcatacaaaccctcgccagttgtggcacaagtgct 6857387 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 6857386 ctggatgtacc 6857376 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 6844114 gttgctggacagccaatccaggccctcgtacagaccctcaccagttgtggcacaagtgct 6844055 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 6844054 ctggatgtacc 6844044
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 71.9 bits (36), Expect = 4e-10 Identities = 41/43 (95%) Strand = Plus / Minus Query: 68 taccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 137909 taccagtgtcgctggcgaagggagtgcagtccaagcttatcag 137867 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 151580 gttgctggacagccaatccaggccctcatacaaaccctcgccagttgtggcacaagtgct 151521 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 151520 ctggatgtacc 151510 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 138248 gttgctggacagccaatccaggccctcgtacagaccctcaccagttgtggcacaagtgct 138189 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 138188 ctggatgtacc 138178
>dbj|AK120035.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C08, full insert sequence Length = 1004 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||| |||||||||||||||||||| | |||||| | ||||||||| |||||||| Sbjct: 627 gtagcacatgtgctctggatgtaccagtgccgctggcgcaaggagtgcagaccaagctt 569
>dbj|AK067029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092P04, full insert sequence Length = 1294 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||| |||||||||||||||||||| | |||||| | ||||||||| |||||||| Sbjct: 662 gtagcacatgtgctctggatgtaccagtgccgctggcgcaaggagtgcagaccaagctt 604
>dbj|AK061970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H06, full insert sequence Length = 976 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||| |||||||||||||||||||| | |||||| | ||||||||| |||||||| Sbjct: 667 gtagcacatgtgctctggatgtaccagtgccgctggcgcaaggagtgcagaccaagctt 609
>dbj|D17760.1|RICARF Oryza sativa (japonica cultivar-group) mRNA for ADP-ribosylation factor, complete cds Length = 1064 Score = 71.9 bits (36), Expect = 4e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||| |||||||||||||||||||| | |||||| | ||||||||| |||||||| Sbjct: 649 gtagcacatgtgctctggatgtaccagtgccgctggcgcaaggagtgcagaccaagctt 591
>emb|AJ508228.2|HVU508228 Hordeum vulgare subsp. vulgare mRNA for ADP-ribosylation factor 1-like protein Length = 934 Score = 69.9 bits (35), Expect = 1e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 53 caagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||||||||| ||||||||||| | |||||| || ||||||||||||||||| |||| Sbjct: 611 caagtgctctgaatgtaccagtgccgctggcgcagagagtgcaggccaagcttgtcag 554
>ref|NM_191065.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 67.9 bits (34), Expect = 6e-09 Identities = 57/65 (87%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||||||||||| ||||||||||| | |||||| ||||| |||| |||||||| Sbjct: 1017 tgtagcacaagtgctctgaatgtaccagtgcctctggcgcagggaatgcaaaccaagctt 958 Query: 106 atcag 110 |||| Sbjct: 957 gtcag 953
>dbj|AK065370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022G24, full insert sequence Length = 1008 Score = 67.9 bits (34), Expect = 6e-09 Identities = 57/65 (87%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||||||||||| ||||||||||| | |||||| ||||| |||| |||||||| Sbjct: 696 tgtagcacaagtgctctgaatgtaccagtgcctctggcgcagggaatgcaaaccaagctt 637 Query: 106 atcag 110 |||| Sbjct: 636 gtcag 632
>dbj|AK062251.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G02, full insert sequence Length = 1005 Score = 67.9 bits (34), Expect = 6e-09 Identities = 57/65 (87%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||||||||||| ||||||||||| | |||||| ||||| |||| |||||||| Sbjct: 693 tgtagcacaagtgctctgaatgtaccagtgcctctggcgcagggaatgcaaaccaagctt 634 Query: 106 atcag 110 |||| Sbjct: 633 gtcag 629
>dbj|AB050957.1| Triticum aestivum arf mRNA for ADP-ribosylation factor, complete cds Length = 972 Score = 67.9 bits (34), Expect = 6e-09 Identities = 48/53 (90%) Strand = Plus / Minus Query: 53 caagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 ||||||||||| ||||||||||| | |||||| ||||||||||| |||||||| Sbjct: 588 caagtgctctgaatgtaccagtgccgctggcgcagggagtgcagaccaagctt 536
>ref|NM_105717.2| Arabidopsis thaliana unknown protein AT1G70490 transcript variant AT1G70490.2 mRNA, complete cds Length = 890 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 637 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 578 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 577 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 530
>ref|NM_202391.1| Arabidopsis thaliana unknown protein AT1G70490 transcript variant AT1G70490.3 mRNA, complete cds Length = 994 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 741 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 682 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 681 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 634
>ref|NM_180644.1| Arabidopsis thaliana GTP binding AT1G70490 transcript variant AT1G70490.1 mRNA, complete cds Length = 913 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 660 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 601 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 600 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 553
>gb|AY056341.1| Arabidopsis thaliana putative ADP-ribosylation factor 1 (At1g70490) mRNA, complete cds Length = 577 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 528 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 469 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 468 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 421
>gb|AF360164.1| Arabidopsis thaliana putative ADP-ribosylation factor 1 (At1g70490) mRNA, complete cds Length = 877 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 611 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 552 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 551 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 504
>emb|BX816017.1|CNS0AEGE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 615 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 363 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 304 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 303 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 256
>gb|AY087235.1| Arabidopsis thaliana clone 33126 mRNA, complete sequence Length = 911 Score = 65.9 bits (33), Expect = 2e-08 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 660 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 601 Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||| ||||| || | ||| || |||||||| |||||||||||||| Sbjct: 600 ctggatataccaatgacgctgacggagggagtgaaggccaagcttatc 553
>gb|AY389610.1| Hyacinthus orientalis ADP-ribosylation factor (ARF) mRNA, partial cds Length = 677 Score = 63.9 bits (32), Expect = 9e-08 Identities = 49/55 (89%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||||||||||||||||| | || ||||| ||||||||||||||||| |||| Sbjct: 366 gtgctctggatgtaccagtggcgttgtcgaagtgagtgcaggccaagcttgtcag 312
>gb|AY389566.1| Hyacinthus orientalis ADP-ribosylation factor (ARF) mRNA, complete cds Length = 770 Score = 63.9 bits (32), Expect = 9e-08 Identities = 52/59 (88%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| ||||||||||||||||| |||| |||||| ||||| || || ||||||||||| Sbjct: 583 gcacacgtgctctggatgtaccaatgtcgctggcgtagggattgaagaccaagcttatc 525
>gb|AY389550.1| Hyacinthus orientalis ADP-ribosylation factor (ARF) mRNA, partial cds Length = 599 Score = 63.9 bits (32), Expect = 9e-08 Identities = 49/55 (89%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||||||||||||||||| | || ||||| ||||||||||||||||| |||| Sbjct: 529 gtgctctggatgtaccagtggcgttgtcgaagtgagtgcaggccaagcttgtcag 475
>gb|AY104308.1| Zea mays PCO139069 mRNA sequence Length = 1108 Score = 61.9 bits (31), Expect = 4e-07 Identities = 54/62 (87%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||||||||||||||| |||||||| | ||||| ||||| || || ||||||||| Sbjct: 731 gtagcacaagtgctctggatataccagtggcgttggcgcagggaatggagaccaagctta 672 Query: 107 tc 108 || Sbjct: 671 tc 670
>gb|U27120.1|CRU27120 Chlamydomonas reinhardtii ADP-ribosylation factor (ARF) mRNA, complete cds Length = 875 Score = 61.9 bits (31), Expect = 4e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||||||||||||| | |||||| |||||||| ||||| ||||| Sbjct: 474 gtgctctggatgtaccagtggcgctggcgcagggagtggaggcccagctt 425
>emb|AJ539045.1|NTA539045 Nicotiana tabacum cDNA-AFLP-fragment BT4-M33-019 Length = 262 Score = 60.0 bits (30), Expect = 1e-06 Identities = 53/61 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||||||||| ||||||||||| | ||| | || |||||||| |||||||||||| Sbjct: 73 gcacaagtgctctgaatgtaccagtgacgctgcctgagagagtgcagtccaagcttatca 14 Query: 110 g 110 | Sbjct: 13 g 13
>emb|AJ539037.1|NTA539037 Nicotiana tabacum cDNA-AFLP-fragment BT4-M33-003 Length = 278 Score = 60.0 bits (30), Expect = 1e-06 Identities = 53/61 (86%) Strand = Plus / Plus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||||||||| ||||||||||| | ||| | || |||||||| |||||||||||| Sbjct: 188 gcacaagtgctctgaatgtaccagtgacgctgcctgagagagtgcagtccaagcttatca 247 Query: 110 g 110 | Sbjct: 248 g 248
>ref|NM_102198.2| Arabidopsis thaliana ATARF/ATARF1/ATARFA1A; GTP binding AT1G23490 (ATARF/ATARF1/ATARFA1A) mRNA, complete cds Length = 961 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|DQ191645.1| Solanum tuberosum unknown mRNA Length = 808 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||||| |||||||||||||||||| | ||| | |||||||| || ||||||||||| Sbjct: 512 gcacaagcgctctggatgtaccagtgacgctgcctgagggagtggagtccaagcttatc 454
>gb|AY113940.1| Arabidopsis thaliana putative ADP-ribosylation factor (At1g23490) mRNA, complete cds Length = 577 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 479 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 421
>gb|AF329504.1| Arabidopsis thaliana putative ADP-ribosylation factor (At1g23490) mRNA, complete cds Length = 908 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AY057727.1| Arabidopsis thaliana At1g23490/F5O8_5 mRNA, complete cds Length = 546 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 479 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 421
>gb|AY050400.1| Arabidopsis thaliana At1g62020/F8K4_21 mRNA, complete cds Length = 2871 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AF325025.2|AF325025 Arabidopsis thaliana At1g70490 (At1g70490/F28C11.30) mRNA, complete cds Length = 892 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AF372901.1|AF372901 Arabidopsis thaliana F28C11.30/F28C11.30 mRNA, complete cds Length = 892 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AF372875.1|AF372875 Arabidopsis thaliana F28C11.30/F28C11.30 mRNA, complete cds Length = 868 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AF324684.2|AF324684 Arabidopsis thaliana At1g23490 (At1g23490/F28C11.30) mRNA, complete cds Length = 892 Score = 56.0 bits (28), Expect = 2e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||||||||||||||| | ||| || || ||||| || ||||||||||| Sbjct: 595 gcacatgtgctctggatgtaccagtgacgctgacggagagagtggagaccaagcttatc 537
>gb|AY189719.1| Gossypium hirsutum ADP-ribosylation factor (ARF) gene, exons 1 through 7 and complete cds Length = 4356 Score = 56.0 bits (28), Expect = 2e-05 Identities = 39/43 (90%) Strand = Plus / Minus Query: 68 taccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 |||||||| | ||| ||||||||||| |||||||||||||||| Sbjct: 3869 taccagtggcgctgacgaagggagtgaaggccaagcttatcag 3827
>dbj|D21105.1|RICSS222 Oryza sativa mRNA for ADP-ribosylation factor, partial sequence Length = 238 Score = 56.0 bits (28), Expect = 2e-05 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||| |||||||||||||||||||| | ||||| | ||||||||| |||||||| Sbjct: 118 gtagcacatgtgctctggatgtaccagtg-ccgtggcgcaaggagtgcagaccaagctt 61
>ref|NM_116094.2| Arabidopsis thaliana GTP binding AT3G62290 mRNA, complete cds Length = 852 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 589 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 530 Query: 107 tc 108 || Sbjct: 529 tc 528
>ref|NM_121471.1| Arabidopsis thaliana ATARFA1B; GTP binding AT5G14670 (ATARFA1B) mRNA, complete cds Length = 567 Score = 54.0 bits (27), Expect = 9e-05 Identities = 74/91 (81%) Strand = Plus / Minus Query: 20 aggccttnatacagtccttccnctgntgtagcacaagtgctctggatgtaccagtgtcnc 79 ||||||| ||| || ||||| | | ||| ||||||||||| || |||||||| || | Sbjct: 509 aggccttcatagagaccttctccagatgtggcacaagtgctttgaatgtaccaatggcgt 450 Query: 80 tggcgaagggagtgcaggccaagcttatcag 110 |||||||| ||||| || ||||||||||||| Sbjct: 449 tggcgaagagagtgaagaccaagcttatcag 419
>gb|AY057728.1| Arabidopsis thaliana AT3g62290/T17J13_250 mRNA, complete cds Length = 546 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 482 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 423 Query: 107 tc 108 || Sbjct: 422 tc 421
>gb|AF372902.1|AF372902 Arabidopsis thaliana AT3g62290/T17J13_250 mRNA, complete cds Length = 846 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 589 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 530 Query: 107 tc 108 || Sbjct: 529 tc 528
>emb|BX824919.1|CNS0A7L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 766 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 571 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 512 Query: 107 tc 108 || Sbjct: 511 tc 510
>emb|BX824773.1|CNS0A5MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 765 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 573 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 514 Query: 107 tc 108 || Sbjct: 513 tc 512
>emb|BX824246.1|CNS0A5PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 710 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 574 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 515 Query: 107 tc 108 || Sbjct: 514 tc 513
>emb|BX822889.1|CNS0A5UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 574 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 515 Query: 107 tc 108 || Sbjct: 514 tc 513
>emb|BX823682.1|CNS0A5DA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 830 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 574 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 515 Query: 107 tc 108 || Sbjct: 514 tc 513
>emb|BX823529.1|CNS0A5G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 458 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 399 Query: 107 tc 108 || Sbjct: 398 tc 397
>emb|BX842128.1|CNS09YC2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS34ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 561 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 502 Query: 107 tc 108 || Sbjct: 501 tc 500
>gb|AY085382.1| Arabidopsis thaliana clone 14909 mRNA, complete sequence Length = 849 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||||| || || || ||||| || ||||||||| Sbjct: 589 gtagcacatgtgctctgtatgtaccagtgtcgttgacggagagagtgaagtccaagctta 530 Query: 107 tc 108 || Sbjct: 529 tc 528
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 13701 gttgctggacagccaatccaggccctcatacaaaccctcgccagttgtggcacaagtgct 13642 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 13641 ctggatgtacc 13631 Score = 54.0 bits (27), Expect = 9e-05 Identities = 59/71 (83%) Strand = Plus / Minus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||||||||||| || |||||||| | ||||| || || | | ||| ||||||||||| Sbjct: 369 gttgctggacagccaatccaggccctcgtacagaccctcaccagttgtggcacaagtgct 310 Query: 61 ctggatgtacc 71 ||||||||||| Sbjct: 309 ctggatgtacc 299 Score = 52.0 bits (26), Expect = 3e-04 Identities = 28/29 (96%) Strand = Plus / Minus Query: 68 taccagtgtcnctggcgaagggagtgcag 96 |||||||||| |||||||||||||||||| Sbjct: 30 taccagtgtcgctggcgaagggagtgcag 2
>gb|BC010487.1| Mus musculus ADP-ribosylation factor 2, mRNA (cDNA clone MGC:5937 IMAGE:3483748), complete cds Length = 2528 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 827 atgtaccagtttctctggcgaagggagtgtaagccaagctt 787
>gb|AY496092.1| Capsicum annuum ADP-ribosylation factor mRNA, complete cds Length = 701 Score = 52.0 bits (26), Expect = 3e-04 Identities = 52/61 (85%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||||||||| ||||||||||| | |||||| || || || || |||||||| ||| Sbjct: 557 gcacaagtgctctgaatgtaccagtgacgctggcggagagaatggagtccaagcttgtca 498 Query: 110 g 110 | Sbjct: 497 g 497
>dbj|AK167653.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530027D22 product:ADP-ribosylation factor 2, full insert sequence Length = 2214 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 547 atgtaccagtttctctggcgaagggagtgtaagccaagctt 507
>dbj|AK167601.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I530024J12 product:ADP-ribosylation factor 2, full insert sequence Length = 2211 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 548 atgtaccagtttctctggcgaagggagtgtaagccaagctt 508
>dbj|AK169412.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920195J03 product:ADP-ribosylation factor 2, full insert sequence Length = 2207 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 544 atgtaccagtttctctggcgaagggagtgtaagccaagctt 504
>dbj|AK167133.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0033K13 product:ADP-ribosylation factor 2, full insert sequence Length = 2207 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 544 atgtaccagtttctctggcgaagggagtgtaagccaagctt 504
>dbj|AK169094.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920079M19 product:ADP-ribosylation factor 2, full insert sequence Length = 2211 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 544 atgtaccagtttctctggcgaagggagtgtaagccaagctt 504
>dbj|AK042977.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730044K04 product:ADP-ribosylation factor 2, full insert sequence Length = 2241 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 574 atgtaccagtttctctggcgaagggagtgtaagccaagctt 534
>dbj|AK077591.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730460M03 product:ADP-ribosylation factor 2, full insert sequence Length = 2222 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 547 atgtaccagtttctctggcgaagggagtgtaagccaagctt 507
>dbj|AK053123.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030006L11 product:ADP-ribosylation factor 2, full insert sequence Length = 2661 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 992 atgtaccagtttctctggcgaagggagtgtaagccaagctt 952
>gb|AF108891.1|AF108891 Capsicum annuum ADP-ribosylation factor mRNA, complete cds Length = 1139 Score = 52.0 bits (26), Expect = 3e-04 Identities = 52/61 (85%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 |||||||||||||| ||||||||||| | |||||| || || || || |||||||| ||| Sbjct: 674 gcacaagtgctctgaatgtaccagtgacgctggcggagagaatggagaccaagcttgtca 615 Query: 110 g 110 | Sbjct: 614 g 614
>gb|AY701398.1| Brassica juncean ARF-like small GTPase 1 mRNA, partial cds Length = 400 Score = 52.0 bits (26), Expect = 3e-04 Identities = 52/61 (85%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||| | ||||| || ||||| ||||||||||| ||| Sbjct: 147 gcacatgtgctctgaatgtaccagtggcgttggcggagagagtgaaggccaagcttgtca 88 Query: 110 g 110 | Sbjct: 87 g 87
>ref|NM_007477.2| Mus musculus ADP-ribosylation factor 2 (Arf2), mRNA Length = 2661 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 992 atgtaccagtttctctggcgaagggagtgtaagccaagctt 952
>gb|AY331383.1| Brassica juncea ARF-like small GTPase mRNA, complete cds Length = 848 Score = 52.0 bits (26), Expect = 3e-04 Identities = 52/61 (85%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||| | ||||| || ||||| ||||||||||| ||| Sbjct: 581 gcacatgtgctctgaatgtaccagtggcgttggcggagagagtgaaggccaagcttgtca 522 Query: 110 g 110 | Sbjct: 521 g 521
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 58742 atgtaccagtttctctggcgaagggagtgtaagccaagctt 58702
>dbj|D87899.1| Mus musculus mRNA for ARF2, complete cds Length = 1155 Score = 52.0 bits (26), Expect = 3e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||||||||| || ||||||||||||||| | ||||||||| Sbjct: 539 atgtaccagtttctctggcgaagggagtgtaagccaagctt 499
>gb|BT013676.1| Lycopersicon esculentum clone 132498F, mRNA sequence Length = 949 Score = 50.1 bits (25), Expect = 0.001 Identities = 54/64 (84%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| ||||||||||| | || || |||||||||| |||||||| Sbjct: 654 gtagcacatgtgctctgaatgtaccagtgacgttgacggagggagtgcaaaccaagcttg 595 Query: 107 tcag 110 |||| Sbjct: 594 tcag 591
>gb|BT012686.1| Lycopersicon esculentum clone 113536F, mRNA sequence Length = 871 Score = 50.1 bits (25), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 ||||||||||| |||||||||||||| | ||| | |||||||| || |||||||| Sbjct: 554 gcacaagtgctttggatgtaccagtgacgctgcctgagggagtggagtccaagctt 499
>ref|NM_100939.2| Arabidopsis thaliana GTP binding AT1G10630 mRNA, complete cds Length = 1037 Score = 48.1 bits (24), Expect = 0.005 Identities = 47/55 (85%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||||||||| | || || || ||||| |||||||||||||||| Sbjct: 570 gtgctttggatgtaccagtggcgttgccggagtgagtgaaggccaagcttatcag 516
>gb|BT015004.1| Arabidopsis thaliana At1g10630 mRNA, complete cds Length = 546 Score = 48.1 bits (24), Expect = 0.005 Identities = 47/55 (85%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||||||||| | || || || ||||| |||||||||||||||| Sbjct: 473 gtgctttggatgtaccagtggcgttgccggagtgagtgaaggccaagcttatcag 419
>gb|BT014776.1| Arabidopsis thaliana At1g10630 gene, complete cds Length = 721 Score = 48.1 bits (24), Expect = 0.005 Identities = 47/55 (85%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||||||||| | || || || ||||| |||||||||||||||| Sbjct: 521 gtgctttggatgtaccagtggcgttgccggagtgagtgaaggccaagcttatcag 467
>emb|BX817795.1|CNS0ACJ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 48.1 bits (24), Expect = 0.005 Identities = 47/55 (85%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||||||||| | || || || ||||| |||||||||||||||| Sbjct: 537 gtgctttggatgtaccagtggcgttgccggagtgagtgaaggccaagcttatcag 483
>emb|BX814801.1|CNS0AARH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 879 Score = 48.1 bits (24), Expect = 0.005 Identities = 47/55 (85%) Strand = Plus / Minus Query: 56 gtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||||||||| | || || || ||||| |||||||||||||||| Sbjct: 565 gtgctttggatgtaccagtggcgttgccggagtgagtgaaggccaagcttatcag 511
>emb|BX824595.1|CNS0A5LG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 823 Score = 46.1 bits (23), Expect = 0.021 Identities = 52/62 (83%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| |||||||| |||||||||| || || || || ||||| || ||||||||| Sbjct: 571 gtagcacatgtgctctgtatgtaccagtttcgttgacggagagagtgaagtccaagctta 512 Query: 107 tc 108 || Sbjct: 511 tc 510
>ref|NM_130285.1| Arabidopsis thaliana ARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding AT2G47170 (ARF1) mRNA, complete cds Length = 995 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 646 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttgtca 587 Query: 110 g 110 | Sbjct: 586 g 586
>gb|DQ222228.1| Daucus carota ADP ribosylation factor 002 (adprf-002) mRNA, complete cds; plastid Length = 897 Score = 44.1 bits (22), Expect = 0.083 Identities = 45/53 (84%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaag 102 ||||| ||||| || ||||||||||||| ||| ||||| || |||| |||||| Sbjct: 578 gcacaggtgctttgaatgtaccagtgtctctgtcgaagtgaatgcaagccaag 526
>gb|AY770746.1| Eucalyptus grandis x Eucalyptus nitens unknown mRNA Length = 413 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtg 75 ||||| |||||||||||||||||||| Sbjct: 204 gcacaggtgctctggatgtaccagtg 179
>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence Length = 89397 Score = 44.1 bits (22), Expect = 0.083 Identities = 54/66 (81%) Strand = Plus / Plus Query: 6 tggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgctctgga 65 |||| || |||||||| |||| ||| ||||||||| | | || ||||| |||||||||| Sbjct: 87977 tggagagccagtccagcccttcatatagtccttccccagaggtggcacatgtgctctgga 88036 Query: 66 tgtacc 71 | |||| Sbjct: 88037 tatacc 88042
>gb|AY142032.1| Arabidopsis thaliana At2g47170/T3D7.2 mRNA, complete cds Length = 546 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 479 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttgtca 420 Query: 110 g 110 | Sbjct: 419 g 419
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtacc 71 |||||||||||||||||| ||||||| Sbjct: 73562 tgtagcacaagtgctctgaatgtacc 73537
>gb|AY074859.1| Arabidopsis thaliana At2g47170/T3D7.2 mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 601 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttgtca 542 Query: 110 g 110 | Sbjct: 541 g 541
>dbj|AK031259.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930438I02 product:ADP-ribosylation factor 2, full insert sequence Length = 1926 Score = 44.1 bits (22), Expect = 0.083 Identities = 36/41 (87%) Strand = Plus / Minus Query: 65 atgtaccagtgtcnctggcgaagggagtgcaggccaagctt 105 |||| ||||| || ||||||||||||||| | ||||||||| Sbjct: 534 atgttccagtttctctggcgaagggagtgtaagccaagctt 494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtacc 71 |||||||||||||||||| ||||||| Sbjct: 34576268 tgtagcacaagtgctctgaatgtacc 34576243
>emb|BX819414.1|CNS0AA89 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 849 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 575 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttttca 516 Query: 110 g 110 | Sbjct: 515 g 515
>gb|AY229880.1| Populus tremuloides ADP-ribosylation factor 2 mRNA, complete cds Length = 924 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtg 75 ||||| |||||||||||||||||||| Sbjct: 579 gcacatgtgctctggatgtaccagtg 554
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtacc 71 |||||||||||||||||| ||||||| Sbjct: 28285 tgtagcacaagtgctctgaatgtacc 28260
>gb|AY087342.1| Arabidopsis thaliana clone 34414 mRNA, complete sequence Length = 995 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 646 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttgtca 587 Query: 110 g 110 | Sbjct: 586 g 586
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 tgtagcacaagtgctctggatgtacc 71 |||||||||||||||||| ||||||| Sbjct: 151987 tgtagcacaagtgctctgaatgtacc 151962
>gb|AF114796.1|AF114796 Glycine max ADP-ribosylation factor mRNA, partial cds Length = 769 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtg 75 ||||||||||||||||| |||||||| Sbjct: 471 gcacaagtgctctggatataccagtg 446
>gb|AF022389.1|AF022389 Vigna unguiculata ADP-ribosylation factor (ARF) mRNA, complete cds Length = 841 Score = 44.1 bits (22), Expect = 0.083 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtg 75 ||||||||||||||||| |||||||| Sbjct: 528 gcacaagtgctctggatataccagtg 503
>gb|M95166.1|ATHADPRFA Arabidopsis thaliana ADP-ribosylation factor mRNA, complete cds Length = 801 Score = 44.1 bits (22), Expect = 0.083 Identities = 51/61 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatca 109 ||||| |||||||| ||||||||||||| || ||||| || || || |||||||| ||| Sbjct: 556 gcacatgtgctctgaatgtaccagtgtcgttgacgaagagaatgaagcccaagcttgtca 497 Query: 110 g 110 | Sbjct: 496 g 496
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 42.1 bits (21), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtagcacaagtgctctggatgtacc 71 |||||||| |||||||||||||||| Sbjct: 116524 gtagcacatgtgctctggatgtacc 116548
>gb|DQ191654.1| Solanum tuberosum ARF-like small GTPase-like protein mRNA, complete cds Length = 881 Score = 42.1 bits (21), Expect = 0.33 Identities = 53/64 (82%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| || ||||| ||||||||||| | || || |||||||||| |||||||| Sbjct: 517 gtagcacatgtactctgaatgtaccagtgacgttgacggagggagtgcaaaccaagcttg 458 Query: 107 tcag 110 |||| Sbjct: 457 tcag 454
>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence Length = 100724 Score = 42.1 bits (21), Expect = 0.33 Identities = 48/58 (82%) Strand = Plus / Plus Query: 14 cagtccaggccttnatacagtccttccnctgntgtagcacaagtgctctggatgtacc 71 ||||| || |||| ||| |||||||| | | ||| ||||| |||||||||||||||| Sbjct: 58661 cagtcaagtccttcataaagtccttcaccagatgtggcacatgtgctctggatgtacc 58718
>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence Length = 106560 Score = 42.1 bits (21), Expect = 0.33 Identities = 48/58 (82%) Strand = Plus / Minus Query: 14 cagtccaggccttnatacagtccttccnctgntgtagcacaagtgctctggatgtacc 71 ||||| || |||| ||| |||||||| | | ||| ||||| |||||||||||||||| Sbjct: 43814 cagtcaagtccttcataaagtccttcaccagatgtggcacatgtgctctggatgtacc 43757
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.33 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 gtagcacaagtgctctggatgtacc 71 |||||||| |||||||||||||||| Sbjct: 23912689 gtagcacatgtgctctggatgtacc 23912713
>gb|DQ294275.1| Solanum tuberosum clone 171A07 ARF-like small GTPase-like protein mRNA, complete cds Length = 829 Score = 42.1 bits (21), Expect = 0.33 Identities = 53/64 (82%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagctta 106 |||||||| || ||||| ||||||||||| | || || |||||||||| |||||||| Sbjct: 509 gtagcacatgtactctgaatgtaccagtgacgttgacggagggagtgcaaaccaagcttg 450 Query: 107 tcag 110 |||| Sbjct: 449 tcag 446
>dbj|AB003377.1| Salix bakko mRNA for ADP-ribosylation factor, complete cds Length = 826 Score = 42.1 bits (21), Expect = 0.33 Identities = 51/62 (82%) Strand = Plus / Minus Query: 14 cagtccaggccttnatacagtccttccnctgntgtagcacaagtgctctggatgtaccag 73 |||||||| |||| ||| || ||||| ||| || ||||| ||||||||||| |||||| Sbjct: 572 cagtccagtccttcataaagcccttctcctgaagtggcacatgtgctctggatataccag 513 Query: 74 tg 75 || Sbjct: 512 tg 511
>gb|BC061435.1| Xenopus tropicalis hypothetical protein MGC76046, mRNA (cDNA clone MGC:76046 IMAGE:5385056), complete cds Length = 2379 Score = 40.1 bits (20), Expect = 1.3 Identities = 34/39 (87%) Strand = Plus / Minus Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggcc 99 |||||||||||||| | ||||||||||| |||||||| Sbjct: 589 ctggatgtaccagttcctatggcgaagggaatgcaggcc 551
>ref|NM_203687.1| Xenopus tropicalis hypothetical protein MGC76046 (MGC76046), mRNA Length = 2379 Score = 40.1 bits (20), Expect = 1.3 Identities = 34/39 (87%) Strand = Plus / Minus Query: 61 ctggatgtaccagtgtcnctggcgaagggagtgcaggcc 99 |||||||||||||| | ||||||||||| |||||||| Sbjct: 589 ctggatgtaccagttcctatggcgaagggaatgcaggcc 551
>gb|DQ078763.1| Zea mays clone Zmcoi6.6 cold-inducible unknown mRNA Length = 448 Score = 40.1 bits (20), Expect = 1.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 79 ctggcgaagggagtgcaggccaagcttatcag 110 ||||||||| || ||||| ||||||||||||| Sbjct: 278 ctggcgaagtgaatgcagtccaagcttatcag 247
>dbj|D45420.1|DARDCARF1 Daucus carota DcArf1 mRNA for ADP-ribosylation factor, complete cds Length = 874 Score = 40.1 bits (20), Expect = 1.3 Identities = 49/59 (83%) Strand = Plus / Minus Query: 50 gcacaagtgctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 ||||| |||||||| || ||||| || | ||| ||||| ||||| || ||||||||||| Sbjct: 537 gcacaggtgctctgaatataccaatggcgctgtcgaagagagtggagaccaagcttatc 479
>ref|NM_187999.1| Oryza sativa (japonica cultivar-group), Ozsa8419 predicted mRNA Length = 546 Score = 38.2 bits (19), Expect = 5.1 Identities = 42/50 (84%) Strand = Plus / Minus Query: 59 ctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||||| |||||||| | ||||| ||||| || || ||||||||||| Sbjct: 470 ctctggatataccagtggcgttggcgcagggaatggagaccaagcttatc 421
>gb|AY241176.1| Oryza sativa (japonica cultivar-group) ARF mRNA, complete cds Length = 956 Score = 38.2 bits (19), Expect = 5.1 Identities = 42/50 (84%) Strand = Plus / Minus Query: 59 ctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||||| |||||||| | ||||| ||||| || || ||||||||||| Sbjct: 608 ctctggatataccagtggcgttggcgcagggaatggagaccaagcttatc 559
>gb|AC150488.2| Bos taurus BAC CH240-466B8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 135467 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 agcacaagtgctctggatg 67 ||||||||||||||||||| Sbjct: 134075 agcacaagtgctctggatg 134057
>ref|XM_381190.1| Gibberella zeae PH-1 chromosome 1 ARF_AJECA ADP-RIBOSYLATION FACTOR (FG01014.1) partial mRNA Length = 552 Score = 38.2 bits (19), Expect = 5.1 Identities = 25/27 (92%) Strand = Plus / Minus Query: 47 gtagcacaagtgctctggatgtaccag 73 |||||||||||| ||||||||||||| Sbjct: 482 gtagcacaagtggactggatgtaccag 456
>gb|AC068531.9| Homo sapiens chromosome 17, clone RP11-463M16, complete sequence Length = 182555 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gggagtgcaggccaagctt 105 ||||||||||||||||||| Sbjct: 33780 gggagtgcaggccaagctt 33798
>emb|CR352210.11| Zebrafish DNA sequence from clone DKEY-166N8 in linkage group 23, complete sequence Length = 180924 Score = 38.2 bits (19), Expect = 5.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 tggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||| || ||||||||||||| Sbjct: 145860 tggcgtagggagtggagaccaagcttatcag 145830
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 38.2 bits (19), Expect = 5.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 79 ctggcgaagggagtgcaggccaa 101 ||||||||||| ||||||||||| Sbjct: 328268 ctggcgaagggtgtgcaggccaa 328290
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 38.2 bits (19), Expect = 5.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 tggcgaagggagtgcaggccaagcttatcag 110 |||||||| ||||| || ||||||||||||| Sbjct: 67171 tggcgaagagagtgaagaccaagcttatcag 67141
>gb|BC075924.1| Danio rerio ADP-ribosylation factor 3a, mRNA (cDNA clone MGC:92190 IMAGE:7051589), complete cds Length = 1475 Score = 38.2 bits (19), Expect = 5.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 tggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||| || ||||||||||||| Sbjct: 481 tggcgtagggagtggagaccaagcttatcag 451
>ref|NM_001003441.1| Danio rerio ADP-ribosylation factor 3a (arf3a), mRNA Length = 1475 Score = 38.2 bits (19), Expect = 5.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 tggcgaagggagtgcaggccaagcttatcag 110 ||||| |||||||| || ||||||||||||| Sbjct: 481 tggcgtagggagtggagaccaagcttatcag 451
>gb|AC091179.5| Homo sapiens chromosome 17, clone CTD-2377D24, complete sequence Length = 85424 Score = 38.2 bits (19), Expect = 5.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 gggagtgcaggccaagctt 105 ||||||||||||||||||| Sbjct: 16144 gggagtgcaggccaagctt 16126
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 38.2 bits (19), Expect = 5.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 agggagtgcaggccaagcttatc 108 |||||||| |||||||||||||| Sbjct: 14362 agggagtgaaggccaagcttatc 14384 Score = 38.2 bits (19), Expect = 5.1 Identities = 57/71 (80%) Strand = Plus / Plus Query: 1 gttgctggacagncagtccaggccttnatacagtccttccnctgntgtagcacaagtgct 60 |||| |||| || |||||||| |||| ||| || ||||| ||| || ||||| ||||| Sbjct: 14200 gttgttggagagccagtccagaccttcataaagcccttcacctgaagtggcacatgtgct 14259 Query: 61 ctggatgtacc 71 |||||| |||| Sbjct: 14260 ctggatatacc 14270
>dbj|AK067217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098K24, full insert sequence Length = 882 Score = 38.2 bits (19), Expect = 5.1 Identities = 42/50 (84%) Strand = Plus / Minus Query: 59 ctctggatgtaccagtgtcnctggcgaagggagtgcaggccaagcttatc 108 |||||||| |||||||| | ||||| ||||| || || ||||||||||| Sbjct: 536 ctctggatataccagtggcgttggcgcagggaatggagaccaagcttatc 487 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 353,220 Number of Sequences: 3902068 Number of extensions: 353220 Number of successful extensions: 19465 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 19260 Number of HSP's gapped (non-prelim): 196 length of query: 113 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 92 effective length of database: 17,151,101,840 effective search space: 1577901369280 effective search space used: 1577901369280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
