ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMX1_CAEEL (Q21988) Amine oxidase family member 1 30 2.2
2DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1... 29 3.8
3DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1... 28 6.4
4DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.1... 28 8.4
5CLTR2_HUMAN (Q9NS75) Cysteinyl leukotriene receptor 2 (CysLTR2) ... 28 8.4
6DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1... 28 8.4
7SRB7_CAEEL (P54142) Serpentine receptor class beta-7 (Protein sr... 28 8.4

>AMX1_CAEEL (Q21988) Amine oxidase family member 1|
          Length = 783

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 165 CTLRRGSCKKLXPLSH--SEWFACCVTLFMVVF 73
           C L+ G+CKK     H  S+  ACC + F V F
Sbjct: 21  CVLQLGNCKKTASYGHRLSKTEACCPSCFSVAF 53



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>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1553

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = -1

Query: 113  NGLRVV*LYSWWFFRSV-----LWLLILASSVYVLLSH 15
            NG      Y WWFF++V     + LL++ + +YV  SH
Sbjct: 1176 NGSEFPQKYYWWFFQTVPGLTGVMLLLILAIMYVFASH 1213



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>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1)
          Length = 1551

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
 Frame = -1

Query: 89   YSWWFFRSV-----LWLLILASSVYVLLSH 15
            Y WWFF++V     + LL++ + +YV  SH
Sbjct: 1182 YYWWFFQTVPGLTGVMLLLVLAIMYVFASH 1211



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>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
            (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
            (Large NOX 2) (Long NOX 2)
          Length = 1517

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -1

Query: 119  IPNGLRVV*LYSWWFFRSV-----LWLLILASSVYVLLSH 15
            + +G ++   Y WWFF +V     + LL++ + +YV  SH
Sbjct: 1138 VNDGSKLPPKYYWWFFETVPGMTGVLLLLVLAIMYVFASH 1177



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>CLTR2_HUMAN (Q9NS75) Cysteinyl leukotriene receptor 2 (CysLTR2) (HG57) (HPN321)|
           (hGPCR21)
          Length = 346

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 107 LRVV*LYSWWFFRSVLWLLILASSVYVL 24
           L V  + S W    ++W+LI+ASS+ +L
Sbjct: 147 LHVTSIRSAWILCGIIWILIMASSIMLL 174



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>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1)
            (Long NOX 1)
          Length = 1551

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
 Frame = -1

Query: 89   YSWWFFRSV-----LWLLILASSVYVLLSH 15
            Y WWFF++V     + LL++ + +YV  SH
Sbjct: 1182 YYWWFFQTVPGLTGVVLLLILAIMYVFASH 1211



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>SRB7_CAEEL (P54142) Serpentine receptor class beta-7 (Protein srb-7)|
          Length = 348

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 157 ASWQLQETXSSQSFRMVCVLCNFIHGGFFGQYCGFSF*LALFMYY 23
           A +QL+E  SS  F +  +   F+H  FFG Y   +  L  F  Y
Sbjct: 226 AKFQLEEVYSSTKFSISVI---FVHVTFFGSYTTITILLRYFGSY 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,302,231
Number of Sequences: 219361
Number of extensions: 497785
Number of successful extensions: 1229
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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