ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, ... 80 5e-13
2gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1... 80 5e-13
3gb|AC104686.2| Homo sapiens BAC clone RP11-74M11 from 4, complet... 42 0.10
4gb|AC108037.3| Homo sapiens BAC clone RP11-168E17 from 4, comple... 42 0.10
5gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complet... 40 0.40
6gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, com... 38 1.6
7emb|Z81475.1|CEC24H11 Caenorhabditis elegans Cosmid C24H11, comp... 38 1.6
8gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone... 38 1.6
9gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, comp... 38 1.6
10emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chr... 38 1.6
11gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, co... 36 6.2
12gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, com... 36 6.2
13gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome... 36 6.2
14gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, com... 36 6.2
15gb|AY277966.1| Takifugu rubripes transcription factor Sox10a (So... 36 6.2
16gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, c... 36 6.2
17emb|CT009519.4| Mouse DNA sequence from clone RP23-145L1 on chro... 36 6.2
18gb|AC114001.5| Mus musculus BAC clone RP23-162H9 from X, complet... 36 6.2
19gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complet... 36 6.2
20emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in... 36 6.2
21emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in... 36 6.2
22gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, com... 36 6.2
23gb|U50312.2| Caenorhabditis elegans cosmid B0222, complete sequence 36 6.2
24gb|AC174378.9| Medicago truncatula clone mth2-57m5, complete seq... 36 6.2
25gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete se... 36 6.2
26emb|AL683858.7| Human DNA sequence from clone RP13-137P7 on chro... 36 6.2
27emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chr... 36 6.2
28emb|AL133229.40| Human DNA sequence from clone RP5-1167E19 on ch... 36 6.2
29emb|AJ222725.1|LAH222725 Lactobacillus helveticus plasmid pLH1 c... 36 6.2
30emb|AJ715861.1| Allacma fusca eIF2g gene for eukaryotic translat... 36 6.2
31gb|AC158531.2| Mus musculus BAC clone RP23-245H23 from chromosom... 36 6.2
32gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete s... 36 6.2
33emb|BX510996.12| Zebrafish DNA sequence from clone DKEYP-81E1 in... 36 6.2
34gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 36 6.2
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 36 6.2
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 36 6.2
37gb|AF128483.1|AF128483 Calotes ceylonensis WHT1624 NADH dehydrog... 36 6.2
38dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic D... 36 6.2
39gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, com... 36 6.2
40gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complet... 36 6.2
41gb|AC140237.4| Mus musculus BAC clone RP24-279G5 from 3, complet... 36 6.2
42gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, com... 36 6.2
43emb|AL928829.6| Mouse DNA sequence from clone RP23-390B17 on chr... 36 6.2
44gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome... 36 6.2
45emb|CT572998.9| Mouse DNA sequence from clone RP23-26C23 on chro... 36 6.2
46gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 6.2
47gb|AC140238.3| Mus musculus BAC clone RP24-279O7 from 3, complet... 36 6.2
48emb|AL671912.8| Mouse DNA sequence from clone RP23-386I5 on chro... 36 6.2 
>gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds
          Length = 768

 Score = 79.8 bits (40), Expect = 5e-13
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                           
Query: 1   gaacaaatggccatgaacacacaacataaactgaatgcaaagctgtcc 48
           ||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 680 gaacaaatggcaatgaacacacaacatagactgaatgcaaagctgtcc 633
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>gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1) gene, complete cds
          Length = 3822

 Score = 79.8 bits (40), Expect = 5e-13
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                            
Query: 1    gaacaaatggccatgaacacacaacataaactgaatgcaaagctgtcc 48
            ||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 3083 gaacaaatggcaatgaacacacaacatagactgaatgcaaagctgtcc 3036
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>gb|AC104686.2| Homo sapiens BAC clone RP11-74M11 from 4, complete sequence
          Length = 149964

 Score = 42.1 bits (21), Expect = 0.10
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     aacacacaacataaactgaat 36
              |||||||||||||||||||||
Sbjct: 148035 aacacacaacataaactgaat 148055
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>gb|AC108037.3| Homo sapiens BAC clone RP11-168E17 from 4, complete sequence
          Length = 73477

 Score = 42.1 bits (21), Expect = 0.10
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 aacacacaacataaactgaat 36
          |||||||||||||||||||||
Sbjct: 71 aacacacaacataaactgaat 91
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>gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complete sequence
          Length = 191665

 Score = 40.1 bits (20), Expect = 0.40
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    cacaacataaactgaatgcaaagc 43
             ||||||| ||||||||||||||||
Sbjct: 11407 cacaacaaaaactgaatgcaaagc 11430
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>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence
          Length = 167372

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    ataaactgaatgcaaagct 44
             |||||||||||||||||||
Sbjct: 90999 ataaactgaatgcaaagct 90981
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>emb|Z81475.1|CEC24H11 Caenorhabditis elegans Cosmid C24H11, complete sequence
          Length = 37854

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    aaactgaatgcaaagctgt 46
             |||||||||||||||||||
Sbjct: 32265 aaactgaatgcaaagctgt 32247
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>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17,
              complete sequence
          Length = 202430

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      aacaaatggccatgaacacacaa 24
              |||||||||||||| ||||||||
Sbjct: 146048 aacaaatggccatgcacacacaa 146026
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>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence
          Length = 167457

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    ataaactgaatgcaaagct 44
             |||||||||||||||||||
Sbjct: 90999 ataaactgaatgcaaagct 90981
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>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete
              sequence
          Length = 210893

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 2      aacaaatggccatgaacacacaa 24
              |||||||||||||| ||||||||
Sbjct: 178109 aacaaatggccatgcacacacaa 178131
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>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence
          Length = 183287

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 26    ataaactgaatgcaaagctgtc 47
             ||||| ||||||||||||||||
Sbjct: 96512 ataaaatgaatgcaaagctgtc 96533
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>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence
          Length = 183447

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 26     ataaactgaatgcaaagctgtc 47
              ||||| ||||||||||||||||
Sbjct: 170871 ataaaatgaatgcaaagctgtc 170892
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>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0013M05 map C3, complete sequence
          Length = 131117

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     caaatggccatgaacaca 21
             ||||||||||||||||||
Sbjct: 21389 caaatggccatgaacaca 21372
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>gb|AC163335.6| Mus musculus chromosome 7, clone RP24-149G13, complete sequence
          Length = 164660

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      atggccatgaacacacaa 24
              ||||||||||||||||||
Sbjct: 130344 atggccatgaacacacaa 130361
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>gb|AY277966.1| Takifugu rubripes transcription factor Sox10a (Sox10a) gene, complete
            cds
          Length = 4700

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 8    tggccatgaacacacaac 25
            ||||||||||||||||||
Sbjct: 3779 tggccatgaacacacaac 3762
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>gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, complete sequence
          Length = 210851

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     tgaacacacaacataaac 31
              ||||||||||||||||||
Sbjct: 103664 tgaacacacaacataaac 103681
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>emb|CT009519.4| Mouse DNA sequence from clone RP23-145L1 on chromosome 14, complete
             sequence
          Length = 216678

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     atggccatgaacacacaa 24
             ||||||||||||||||||
Sbjct: 64307 atggccatgaacacacaa 64290
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>gb|AC114001.5| Mus musculus BAC clone RP23-162H9 from X, complete sequence
          Length = 210319

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 15    gaacacacaacataaact 32
             ||||||||||||||||||
Sbjct: 77367 gaacacacaacataaact 77350
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>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence
          Length = 200088

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 1      gaacaaatggccatgaac 18
              ||||||||||||||||||
Sbjct: 197547 gaacaaatggccatgaac 197564
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>emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in linkage group 14,
            complete sequence
          Length = 143937

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   atgaacacacaacataaa 30
            ||||||||||||||||||
Sbjct: 5416 atgaacacacaacataaa 5399
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>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8, complete
              sequence
          Length = 242845

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     atgaacacacaacataaa 30
              ||||||||||||||||||
Sbjct: 154942 atgaacacacaacataaa 154959
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>gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, complete sequence
          Length = 197271

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    cataaactgaatgcaaag 42
             ||||||||||||||||||
Sbjct: 83978 cataaactgaatgcaaag 83995
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>gb|U50312.2| Caenorhabditis elegans cosmid B0222, complete sequence
          Length = 40535

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 20    cacaacataaactgaatgcaaa 41
             |||||||| |||||||||||||
Sbjct: 27035 cacaacattaactgaatgcaaa 27056
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>gb|AC174378.9| Medicago truncatula clone mth2-57m5, complete sequence
          Length = 126476

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    acataaactgaatgcaaa 41
             ||||||||||||||||||
Sbjct: 50066 acataaactgaatgcaaa 50083
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>gb|AC150505.12| Medicago truncatula clone mth2-99l2, complete sequence
          Length = 111277

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    acataaactgaatgcaaa 41
             ||||||||||||||||||
Sbjct: 17906 acataaactgaatgcaaa 17889
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>emb|AL683858.7| Human DNA sequence from clone RP13-137P7 on chromosome X, complete
             sequence
          Length = 39746

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 21    acaacataaactgaatgcaaag 42
             ||||||||||||||| ||||||
Sbjct: 25520 acaacataaactgaaagcaaag 25499
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>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3'
              end of the AMD1 gene for S-adenosylmethionine decarboxylase
              1, two novel genes, a glutathione S-transferase M2 (muscle)
              (GSTM2) pseudogene and three CpG islands, complete sequence
          Length = 190440

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     tgaacacacaacataaac 31
              ||||||||||||||||||
Sbjct: 119272 tgaacacacaacataaac 119255
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>emb|AL133229.40| Human DNA sequence from clone RP5-1167E19 on chromosome 20 Contains STSs,
              GSSs and a CpG island, complete sequence
          Length = 161776

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 12     catgaacacacaacataa 29
              ||||||||||||||||||
Sbjct: 133427 catgaacacacaacataa 133410
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>emb|AJ222725.1|LAH222725 Lactobacillus helveticus plasmid pLH1 complete sequence, strain
            ATCC15009
          Length = 19360

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 2    aacaaatggccatgaaca 19
            ||||||||||||||||||
Sbjct: 9577 aacaaatggccatgaaca 9594
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>emb|AJ715861.1| Allacma fusca eIF2g gene for eukaryotic translation initiation factor
            2 gamma subunit, exons 1-7
          Length = 3738

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   atgaacacacaacataaa 30
            ||||||||||||||||||
Sbjct: 3243 atgaacacacaacataaa 3226
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>gb|AC158531.2| Mus musculus BAC clone RP23-245H23 from chromosome 14, complete sequence
          Length = 175848

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 7      atggccatgaacacacaa 24
              ||||||||||||||||||
Sbjct: 168636 atggccatgaacacacaa 168619
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>gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete sequence
          Length = 105458

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    acataaactgaatgcaaa 41
             ||||||||||||||||||
Sbjct: 82689 acataaactgaatgcaaa 82672
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>emb|BX510996.12| Zebrafish DNA sequence from clone DKEYP-81E1 in linkage group 21,
              complete sequence
          Length = 197012

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 10     gccatgaacacacaacat 27
              ||||||||||||||||||
Sbjct: 123079 gccatgaacacacaacat 123062
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 26      ataaactgaatgcaaagctgtc 47
               ||||||||||| ||||||||||
Sbjct: 2186884 ataaactgaattcaaagctgtc 2186905
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 4        caaatggccatgaacaca 21
                ||||||||||||||||||
Sbjct: 13436830 caaatggccatgaacaca 13436813
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 27      taaactgaatgcaaagct 44
               ||||||||||||||||||
Sbjct: 3447093 taaactgaatgcaaagct 3447110
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>gb|AF128483.1|AF128483 Calotes ceylonensis WHT1624 NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1694

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 24   acataaactgaatgcaaa 41
            ||||||||||||||||||
Sbjct: 1404 acataaactgaatgcaaa 1421
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>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1058_F03
          Length = 150486

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     taaactgaatgcaaagct 44
              ||||||||||||||||||
Sbjct: 115574 taaactgaatgcaaagct 115591
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>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence
          Length = 200177

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 7      atggccatgaacacacaa 24
              ||||||||||||||||||
Sbjct: 198145 atggccatgaacacacaa 198128
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>gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complete sequence
          Length = 221264

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     atggccatgaacacacaa 24
             ||||||||||||||||||
Sbjct: 14839 atggccatgaacacacaa 14822
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>gb|AC140237.4| Mus musculus BAC clone RP24-279G5 from 3, complete sequence
          Length = 155999

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 1    gaacaaatggccatgaac 18
            ||||||||||||||||||
Sbjct: 9266 gaacaaatggccatgaac 9283
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>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence
          Length = 215013

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 4      caaatggccatgaacaca 21
              ||||||||||||||||||
Sbjct: 147924 caaatggccatgaacaca 147907
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>emb|AL928829.6| Mouse DNA sequence from clone RP23-390B17 on chromosome 2, complete
             sequence
          Length = 162437

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    atgaacacacaacataaa 30
             ||||||||||||||||||
Sbjct: 52123 atgaacacacaacataaa 52140
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>gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome 3, complete sequence
          Length = 230573

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      atggccatgaacacacaa 24
              ||||||||||||||||||
Sbjct: 156329 atggccatgaacacacaa 156346
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>emb|CT572998.9| Mouse DNA sequence from clone RP23-26C23 on chromosome 12, complete
             sequence
          Length = 180742

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     atggccatgaacacacaa 24
             ||||||||||||||||||
Sbjct: 76668 atggccatgaacacacaa 76651
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 4        caaatggccatgaacaca 21
                ||||||||||||||||||
Sbjct: 13517009 caaatggccatgaacaca 13516992
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>gb|AC140238.3| Mus musculus BAC clone RP24-279O7 from 3, complete sequence
          Length = 174633

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     gaacaaatggccatgaac 18
             ||||||||||||||||||
Sbjct: 97874 gaacaaatggccatgaac 97857
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>emb|AL671912.8| Mouse DNA sequence from clone RP23-386I5 on chromosome X, complete
             sequence
          Length = 186109

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     aacaaatggccatgaaca 19
             ||||||||||||||||||
Sbjct: 55978 aacaaatggccatgaaca 55961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 479,302
Number of Sequences: 3902068
Number of extensions: 479302
Number of successful extensions: 130480
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130270
Number of HSP's gapped (non-prelim): 210
length of query: 48
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 28
effective length of database: 17,155,003,908
effective search space: 480340109424
effective search space used: 480340109424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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