ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 7e-96
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
3gb|AY111794.1| Zea mays CL13018_1 mRNA sequence 105 2e-19
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
5emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 105 2e-19
6gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 46 0.14
7gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.57
8dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.3
9emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, c... 42 2.3
10gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 2.3
11gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
12gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.9
13gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
14gb|AC079598.13| Homo sapiens 12 BAC RP11-248E9 (Roswell Park Can... 40 8.9
15gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, compl... 40 8.9
16gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence 40 8.9
17emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chr... 40 8.9
18gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp... 40 8.9
19gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, comp... 40 8.9
20gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosom... 40 8.9
21gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosom... 40 8.9
22dbj|AK041653.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 8.9
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
25dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
26dbj|AK063561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
27gb|U01755.1|MGU01755 Mycoplasma genitalium random genomic clone ... 40 8.9
28gb|L43967.2| Mycoplasma genitalium G37, complete genome 40 8.9
29gb|U01717.1|MGU01717 Mycoplasma genitalium random genomic clone ... 40 8.9
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
31gb|AY559995.1| Neolamprologus modestus clone 553Nmodch control r... 40 8.9
32emb|AJ131017.1|MMU131017 Mus musculus SCL gene locus 40 8.9
33emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on ch... 40 8.9
34emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & C... 40 8.9 
>dbj|AK102247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F06, full
            insert sequence
          Length = 1910

 Score =  359 bits (181), Expect = 7e-96
 Identities = 364/425 (85%)
 Strand = Plus / Minus

                                                                        
Query: 220  cccatgttcatcagggtggtgaggtgggggatctccttgggcacagacgccgtcaacacc 279
            ||||||||||| |||||||| | ||| | ||||||||| ||||| ||||||||||  |||
Sbjct: 1511 cccatgttcataagggtggttatgtgagagatctccttcggcaccgacgccgtcaggacc 1452

                                                                        
Query: 280  tcgtggccggactcggtgatgaggacctcgtcctcgatccttattcctatgccacggaac 339
            ||||| || |||||||||||||||||||||||||||||||| ||||| ||||| ||| ||
Sbjct: 1451 tcgtgaccagactcggtgatgaggacctcgtcctcgatcctaattccgatgccccggtac 1392

                                                                        
Query: 340  ctgtccggggccttctcattgagtatcgggaccgggggaatgtagatccccggttcaatg 399
            || || ||||| ||||| || ||||| || ||||| || ||||| | ||| || || || 
Sbjct: 1391 ctatctggggcgttctctttcagtattggcaccggtgggatgtaaaccccgggctcgatc 1332

                                                                        
Query: 400  gttattacaacgcctggctccaaggttttgtcgctgctgaggctcgtggagtcatgaata 459
            ||||||| ||| ||||||||||||| ||||||  |||| ||  |   ||| |||||||||
Sbjct: 1331 gttattataactcctggctccaagggtttgtccttgctaagcttgacggaatcatgaata 1272

                                                                        
Query: 460  tccattcccaacgaatgacctattgaggttggattcaaataattgtattggatagatttg 519
            |||||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||| 
Sbjct: 1271 tccattcctaacgagtgacctattgctgttggattcaaataattgtattggatggatttc 1212

                                                                        
Query: 520  ccctttcctataattccgagttcttggaatccacttatcaacatcttgaccgaatgatgg 579
            |||||  ||| |||||| ||||||||||| ||  ||||||||||||||||||||||||  
Sbjct: 1211 cccttctctaaaattccaagttcttggaaaccctttatcaacatcttgaccgaatgatta 1152

                                                                        
Query: 580  tgtatctctttaatgctcgtgcctggtttacaaagctttatgcattccttattcgtctcc 639
            |||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1151 tgtatctcgttaatgcttgcgcctggtttacaaagctttatgcattccttatttgtctcc 1092

                 
Query: 640  agtat 644
            |||||
Sbjct: 1091 agtat 1087
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                            
Query: 568      accgaatgatggtgtatctctttaatgctcgtgcctggtttacaaagctttatgcattcc 627
                ||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 23143859 accgaatgattatgtatctcgttaatgcttgcgcctggtttacaaagctttatgcattcc 23143800

                                 
Query: 628      ttattcgtctccagtat 644
                ||||| |||||||||||
Sbjct: 23143799 ttatttgtctccagtat 23143783



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                            
Query: 477      acctattgaggttggattcaaataattgtattggatagatttgccctttcctataattcc 536
                ||||||||  |||||||||||||||||||||||||| ||||| |||||  ||| ||||||
Sbjct: 23144035 acctattgctgttggattcaaataattgtattggatggatttccccttctctaaaattcc 23143976

                                                  
Query: 537      gagttcttggaatccacttatcaacatcttgacc 570
                 ||||||||||| ||  |||||||||||||||||
Sbjct: 23143975 aagttcttggaaaccctttatcaacatcttgacc 23143942



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                            
Query: 277      acctcgtggccggactcggtgatgaggacctcgtcctcgatccttattcctatgccacgg 336
                |||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 23144551 acctcgtgaccagactcggtgatgaggacctcgtcctcgatcctaattccgatgccccgg 23144492

                                                               
Query: 337      aacctgtccggggccttctcattgagtatcgggaccgggggaatgta 383
                 |||| || ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 23144491 tacctatctggggcgttctctttcagtattggcaccggtgggatgta 23144445



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220      cccatgttcatcagggtggtgaggtgggggatctccttgggcacagacgccgtca 274
                ||||||||||| |||||||| | ||| | ||||||||| ||||| ||||||||||
Sbjct: 23144717 cccatgttcataagggtggttatgtgagagatctccttcggcaccgacgccgtca 23144663



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                            
Query: 406      acaacgcctggctccaaggttttgtcgctgctgaggctcgtggagtcatgaatatccatt 465
                ||||| ||||||||||||| ||||||  |||| ||  |   ||| |||||||||||||||
Sbjct: 23144195 acaactcctggctccaagggtttgtccttgctaagcttgacggaatcatgaatatccatt 23144136

                               
Query: 466      cccaacgaatgacct 480
                || ||||| ||||||
Sbjct: 23144135 cctaacgagtgacct 23144121
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>gb|AY111794.1| Zea mays CL13018_1 mRNA sequence
          Length = 370

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                       
Query: 219 gcccatgttcatcagggtggtgaggtgggggatctccttgggcacagacgccgtcaacac 278
           ||||||||||||||||||||| ||||| | || |||||||||||| |||||||||   ||
Sbjct: 255 gcccatgttcatcagggtggtcaggtgcgagacctccttgggcaccgacgccgtctcgac 314

                                                    
Query: 279 ctcgtggccggactcggtgatgaggacctcgtcctcgatcc 319
           ||||||||||   |||||||||||||||| |||||||||||
Sbjct: 315 ctcgtggccgtcgtcggtgatgaggaccttgtcctcgatcc 355
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                            
Query: 568      accgaatgatggtgtatctctttaatgctcgtgcctggtttacaaagctttatgcattcc 627
                ||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 23072050 accgaatgattatgtatctcgttaatgcttgcgcctggtttacaaagctttatgcattcc 23071991

                                 
Query: 628      ttattcgtctccagtat 644
                ||||| |||||||||||
Sbjct: 23071990 ttatttgtctccagtat 23071974



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                            
Query: 477      acctattgaggttggattcaaataattgtattggatagatttgccctttcctataattcc 536
                ||||||||  |||||||||||||||||||||||||| ||||| |||||  ||| ||||||
Sbjct: 23072226 acctattgctgttggattcaaataattgtattggatggatttccccttctctaaaattcc 23072167

                                                  
Query: 537      gagttcttggaatccacttatcaacatcttgacc 570
                 ||||||||||| ||  |||||||||||||||||
Sbjct: 23072166 aagttcttggaaaccctttatcaacatcttgacc 23072133



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                            
Query: 277      acctcgtggccggactcggtgatgaggacctcgtcctcgatccttattcctatgccacgg 336
                |||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 23072742 acctcgtgaccagactcggtgatgaggacctcgtcctcgatcctaattccgatgccccgg 23072683

                                                               
Query: 337      aacctgtccggggccttctcattgagtatcgggaccgggggaatgta 383
                 |||| || ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 23072682 tacctatctggggcgttctctttcagtattggcaccggtgggatgta 23072636



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220      cccatgttcatcagggtggtgaggtgggggatctccttgggcacagacgccgtca 274
                ||||||||||| |||||||| | ||| | ||||||||| ||||| ||||||||||
Sbjct: 23072908 cccatgttcataagggtggttatgtgagagatctccttcggcaccgacgccgtca 23072854



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                            
Query: 406      acaacgcctggctccaaggttttgtcgctgctgaggctcgtggagtcatgaatatccatt 465
                ||||| ||||||||||||| ||||||  |||| ||  |   ||| |||||||||||||||
Sbjct: 23072386 acaactcctggctccaagggtttgtccttgctaagcttgacggaatcatgaatatccatt 23072327

                               
Query: 466      cccaacgaatgacct 480
                || ||||| ||||||
Sbjct: 23072326 cctaacgagtgacct 23072312
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>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 568   accgaatgatggtgtatctctttaatgctcgtgcctggtttacaaagctttatgcattcc 627
             ||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct: 34538 accgaatgattatgtatctcgttaatgcttgcgcctggtttacaaagctttatgcattcc 34597

                              
Query: 628   ttattcgtctccagtat 644
             ||||| |||||||||||
Sbjct: 34598 ttatttgtctccagtat 34614



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                         
Query: 477   acctattgaggttggattcaaataattgtattggatagatttgccctttcctataattcc 536
             ||||||||  |||||||||||||||||||||||||| ||||| |||||  ||| ||||||
Sbjct: 34362 acctattgctgttggattcaaataattgtattggatggatttccccttctctaaaattcc 34421

                                               
Query: 537   gagttcttggaatccacttatcaacatcttgacc 570
              ||||||||||| ||  |||||||||||||||||
Sbjct: 34422 aagttcttggaaaccctttatcaacatcttgacc 34455



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 277   acctcgtggccggactcggtgatgaggacctcgtcctcgatccttattcctatgccacgg 336
             |||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 33846 acctcgtgaccagactcggtgatgaggacctcgtcctcgatcctaattccgatgccccgg 33905

                                                            
Query: 337   aacctgtccggggccttctcattgagtatcgggaccgggggaatgta 383
              |||| || ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 33906 tacctatctggggcgttctctttcagtattggcaccggtgggatgta 33952



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 220   cccatgttcatcagggtggtgaggtgggggatctccttgggcacagacgccgtca 274
             ||||||||||| |||||||| | ||| | ||||||||| ||||| ||||||||||
Sbjct: 33680 cccatgttcataagggtggttatgtgagagatctccttcggcaccgacgccgtca 33734



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                         
Query: 406   acaacgcctggctccaaggttttgtcgctgctgaggctcgtggagtcatgaatatccatt 465
             ||||| ||||||||||||| ||||||  |||| ||  |   ||| |||||||||||||||
Sbjct: 34202 acaactcctggctccaagggtttgtccttgctaagcttgacggaatcatgaatatccatt 34261

                            
Query: 466   cccaacgaatgacct 480
             || ||||| ||||||
Sbjct: 34262 cctaacgagtgacct 34276
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 288     ggactcggtgatgaggacctcgt 310
               |||||||||||||||||||||||
Sbjct: 2970822 ggactcggtgatgaggacctcgt 2970800
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 277     acctcgtggccggactcggtga 298
               ||||||||||||||||||||||
Sbjct: 3785935 acctcgtggccggactcggtga 3785956
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 288   ggactcggtgatgaggacctc 308
             |||||||||||||||||||||
Sbjct: 46159 ggactcggtgatgaggacctc 46179
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>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence
          Length = 156592

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    ggggaaagaaaatgtatggat 100
             |||||||||||||||||||||
Sbjct: 48847 ggggaaagaaaatgtatggat 48827
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 288     ggactcggtgatgaggacctc 308
               |||||||||||||||||||||
Sbjct: 1866055 ggactcggtgatgaggacctc 1866035
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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07,
              complete sequence
          Length = 154528

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ttgccatttaggttttcagg 48
              ||||||||||||||||||||
Sbjct: 122036 ttgccatttaggttttcagg 122055
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 294    ggtgatgaggacctcgtcctcgat 317
              ||||||||| ||||||||||||||
Sbjct: 560920 ggtgatgagcacctcgtcctcgat 560897
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>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0039A07 map near 50283S, complete sequence
          Length = 158158

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggtgaggtgggggatctcct 256
             ||||||||||||||||||||
Sbjct: 50551 ggtgaggtgggggatctcct 50570
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>gb|AC079598.13| Homo sapiens 12 BAC RP11-248E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168901

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ttttgccatttaggttttca 46
             ||||||||||||||||||||
Sbjct: 14921 ttttgccatttaggttttca 14940
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>gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, complete sequence
          Length = 195086

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 613   agctttatgcattccttatt 632
             ||||||||||||||||||||
Sbjct: 45384 agctttatgcattccttatt 45365
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>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
          Length = 208667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tcagggtggtgaggtggggg 249
             ||||||||||||||||||||
Sbjct: 55185 tcagggtggtgaggtggggg 55166
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>emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chromosome 11 Contains part
             of a novel gene, the 5' end of a gene that is a possible
             ortholog of human dynein axonemal heavy polypeptide 9
             (DNAH9) and a CpG island, complete sequence
          Length = 202358

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 72    acaggaacggggaaagaaaatgtatggatgta 103
             ||||||| || ||||| |||||||||||||||
Sbjct: 27415 acaggaatggagaaaggaaatgtatggatgta 27384
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>gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aggaacggggaaagaaaatg 93
             ||||||||||||||||||||
Sbjct: 78158 aggaacggggaaagaaaatg 78177
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>gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, complete sequence
          Length = 198235

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aggaacggggaaagaaaatg 93
             ||||||||||||||||||||
Sbjct: 21673 aggaacggggaaagaaaatg 21654
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>gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosome 16, complete sequence
          Length = 191677

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 613    agctttatgcattccttatt 632
              ||||||||||||||||||||
Sbjct: 121076 agctttatgcattccttatt 121057
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>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence
          Length = 188292

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   tctcagctgcaagcagctct 185
             ||||||||||||||||||||
Sbjct: 14163 tctcagctgcaagcagctct 14144
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>dbj|AK041653.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630028B08 product:unclassifiable, full
            insert sequence
          Length = 2487

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  tgatggtgtatctctttaat 593
            ||||||||||||||||||||
Sbjct: 1717 tgatggtgtatctctttaat 1698
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      ggtgaggtgggggatctcct 256
                ||||||||||||||||||||
Sbjct: 14304939 ggtgaggtgggggatctcct 14304958
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggtgaggtgggggatctcct 256
               ||||||||||||||||||||
Sbjct: 7398379 ggtgaggtgggggatctcct 7398398
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>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0702F03
          Length = 141111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggtgaggtgggggatctcct 256
             ||||||||||||||||||||
Sbjct: 59407 ggtgaggtgggggatctcct 59426
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>dbj|AK063561.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F03, full
            insert sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   ttgccatttaggttttcagg 48
            ||||||||||||||||||||
Sbjct: 1161 ttgccatttaggttttcagg 1180
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>gb|U01755.1|MGU01755 Mycoplasma genitalium random genomic clone esh1a, partial cds
          Length = 217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 376 ggaatgtagatccccggttcaatggtta 403
           ||||| |||||||| |||||||||||||
Sbjct: 87  ggaatatagatcccaggttcaatggtta 60
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>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 376    ggaatgtagatccccggttcaatggtta 403
              ||||| |||||||| |||||||||||||
Sbjct: 407820 ggaatatagatcccaggttcaatggtta 407847
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>gb|U01717.1|MGU01717 Mycoplasma genitalium random genomic clone esc12, partial cds
          Length = 223

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 376 ggaatgtagatccccggttcaatggtta 403
           ||||| |||||||| |||||||||||||
Sbjct: 92  ggaatatagatcccaggttcaatggtta 65
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      ggtgaggtgggggatctcct 256
                ||||||||||||||||||||
Sbjct: 14386941 ggtgaggtgggggatctcct 14386960
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>gb|AY559995.1| Neolamprologus modestus clone 553Nmodch control region, partial
           sequence; mitochondrial
          Length = 345

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 attcaaataattgtattgga 511
           ||||||||||||||||||||
Sbjct: 187 attcaaataattgtattgga 168
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>emb|AJ131017.1|MMU131017 Mus musculus SCL gene locus
          Length = 86380

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   tgatggtgtatctctttaat 593
             ||||||||||||||||||||
Sbjct: 24531 tgatggtgtatctctttaat 24512
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>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
              sequence
          Length = 201142

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 574    tgatggtgtatctctttaat 593
              ||||||||||||||||||||
Sbjct: 129655 tgatggtgtatctctttaat 129636
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>emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & CYP_b genes
          Length = 234411

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   tgatggtgtatctctttaat 593
             ||||||||||||||||||||
Sbjct: 24531 tgatggtgtatctctttaat 24512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,759,758
Number of Sequences: 3902068
Number of extensions: 4759758
Number of successful extensions: 82893
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82562
Number of HSP's gapped (non-prelim): 331
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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