ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 337 3e-89
2dbj|AK070909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 7e-87
3gb|AY104487.1| Zea mays PCO115502 mRNA sequence 250 5e-63
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 167 6e-38
6emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb... 167 6e-38
7dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
8gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete ... 46 0.15
9emb|X53828.1|GGLDHA Chicken LDH-A mRNA for lactate dehydrogenase... 44 0.59
10ref|NM_205284.1| Gallus gallus lactate dehydrogenase A (LDHA), mRNA 44 0.59
11ref|NM_153800.2| Mus musculus Rho GTPase activating protein 22 (... 42 2.3
12gb|AY541447.1| Mus musculus GTPase-activating protein p68RacGAP ... 42 2.3
13gb|BC038272.1| Mus musculus Rho GTPase activating protein 22, mR... 42 2.3
14ref|XM_740960.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.3
15dbj|AK144277.1| Mus musculus 16 days neonate male diencephalon c... 42 2.3
16dbj|AK078218.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.3
17dbj|AK052541.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 42 2.3
18dbj|AK046097.1| Mus musculus adult male corpora quadrigemina cDN... 42 2.3
19gb|AC068286.5| Homo sapiens BAC clone RP11-526G2 from 2, complet... 42 2.3
20ref|XM_224637.3| PREDICTED: Rattus norvegicus Rho GTPase activat... 42 2.3
21gb|AC154649.3| Mus musculus BAC clone RP23-156O5 from chromosome... 42 2.3
22gb|DQ239897.1| Helicobacter pylori plasmid pAL226, complete sequ... 40 9.2
23gb|AY487825.1| Helicobacter pylori strain HUP-B43 plasticity zon... 40 9.2
24gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
25gb|AC149095.2| Pan troglodytes BAC clone CH251-141L12 from Y, co... 40 9.2
26gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete se... 40 9.2
27gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome... 40 9.2
28gb|AC002286.1| Homo sapiens Chromosome 16p13.13 cosmid clone 356... 40 9.2
29gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosom... 40 9.2
30gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome... 40 9.2
31emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, compl... 40 9.2
32emb|AL390205.17| Human DNA sequence from clone RP11-15H7 on chro... 40 9.2
33emb|AL390060.14| Human DNA sequence from clone RP11-56H2 on chro... 40 9.2
34emb|AL022396.1|HS380E11 Human DNA sequence from clone RP3-380E11... 40 9.2
35emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC... 40 9.2
36gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, comp... 40 9.2
37dbj|BS000653.1| Pan troglodytes chromosome Y clone:PTB-017B13, c... 40 9.2
38gb|AC090679.5| Homo sapiens 12 BAC RP11-80O3 (Roswell Park Cance... 40 9.2
39gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.2
40gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete seq... 40 9.2
41gb|AC092540.4| Homo sapiens BAC clone RP11-190E23 from 4, comple... 40 9.2
42gb|AC097379.2| Homo sapiens BAC clone RP11-277G18 from 4, comple... 40 9.2
43gb|AC011974.11| Homo sapiens, clone RP11-15L5, complete sequence 40 9.2
44gb|AF039650.4|AF039650 Caenorhabditis elegans acetylcholinestera... 40 9.2
45ref|NM_064562.3| Caenorhabditis elegans abnormal ACEtylcholinest... 40 9.2
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
47dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
48gb|AC155805.2| Mus musculus BAC clone RP24-341E20 from chromosom... 40 9.2
49gb|AY853324.1| Hypocenomyce friesii small subunit ribosomal RNA ... 40 9.2
50gb|AC007220.4|AC007220 Homo sapiens chromosome 16 clone RP11-396... 40 9.2
51gb|AC009239.3|AC009239 Homo sapiens BAC clone RP11-470K20 from Y... 40 9.2
52gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete... 40 9.2
53dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
54emb|AL110490.1|CEY48B6A Caenorhabditis elegans YAC Y48B6A, compl... 40 9.2
55dbj|AK064107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
56gb|AY639118.1| Helicobacter pylori strain SJM27 transposon ISHp6... 40 9.2
57gb|AY639117.1| Helicobacter pylori strain I-86 transposon ISHp60... 40 9.2
58gb|AY639116.1| Helicobacter pylori strain Alaska97 transposon IS... 40 9.2
59gb|AY639115.1| Helicobacter pylori strain Alaska64 transposon IS... 40 9.2
60gb|AY639114.1| Helicobacter pylori strain AfricaR48 transposon I... 40 9.2
61gb|AY639113.1| Helicobacter pylori strain HUP-B80 transposon ISH... 40 9.2
62gb|AY639112.1| Helicobacter pylori strain HUP-B79 transposon ISH... 40 9.2
63gb|AY639111.1| Helicobacter pylori strain LitA38 transposon ISHp... 40 9.2
64gb|AY639110.1| Helicobacter pylori strain LitA7 transposon ISHp6... 40 9.2
65gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, co... 40 9.2
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
67gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, comple... 40 9.2
68emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chro... 40 9.2
69gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, co... 40 9.2
70emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chrom... 40 9.2
71dbj|AB056838.1| Macaca fascicularis brain cDNA clone:QflA-14981,... 40 9.2
72dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 9.2 
>dbj|AK058791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F06, full
           insert sequence
          Length = 1298

 Score =  337 bits (170), Expect = 3e-89
 Identities = 341/398 (85%)
 Strand = Plus / Minus

                                                                       
Query: 270 gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
           ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 973 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 914

                                                                       
Query: 330 gtgttgtagaagtgaagactagcacgggcgcttgcattgatgccaagggtgcgatgcaaa 389
           || ||||||||||||||||||||||| || ||||||||||| ||||| || |||||||| 
Sbjct: 913 gtattgtagaagtgaagactagcacgagcacttgcattgataccaagagttcgatgcaat 854

                                                                       
Query: 390 atctgtgcacaatgatgccctgaccgaatcgctatgccatgctggagatcaagaatttct 449
           ||||||||||||||||| ||||||||||| || | |||||||||||| ||||||||||| 
Sbjct: 853 atctgtgcacaatgatggcctgaccgaattgccacgccatgctggaggtcaagaatttcg 794

                                                                       
Query: 450 gcaatatctgttggatgaacattctcaacattgaaagaacataaaggagcacggtgatca 509
           ||||||||||||||||||||||| |||||||| ||||||||||| || || |||||| ||
Sbjct: 793 gcaatatctgttggatgaacattttcaacattaaaagaacataatggggcgcggtgaaca 734

                                                                       
Query: 510 ctctgagaaggcgccggaccatagatacgaacatttggaacggacagaaggctctcataa 569
            | ||  | || || ||||| ||||| |||||||||||||| |  | |||||||||||| 
Sbjct: 733 gtttggcatggagctggaccgtagatccgaacatttggaacagcaataaggctctcatag 674

                                                                       
Query: 570 aggtaagaccccaactctttctcatactcgtggatcctctgcatgccaaagtgtgacaga 629
           || || | | ||||||| ||||||||||| |||||| ||||||||||||  ||||||| |
Sbjct: 673 agataggtcgccaactcattctcatactcatggatcttctgcatgccaatttgtgacaaa 614

                                                 
Query: 630 taatctatcgcaactcccaatcctatagcttctccaat 667
           ||||| || ||   ||||||||||||||||||||||||
Sbjct: 613 taatcaattgctgttcccaatcctatagcttctccaat 576
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>dbj|AK070909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065F24, full
           insert sequence
          Length = 1162

 Score =  329 bits (166), Expect = 7e-87
 Identities = 340/398 (85%)
 Strand = Plus / Minus

                                                                       
Query: 270 gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
           ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 786 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 727

                                                                       
Query: 330 gtgttgtagaagtgaagactagcacgggcgcttgcattgatgccaagggtgcgatgcaaa 389
           || ||||||||||||||||||||||| || ||||||||||| ||||| || |||||||| 
Sbjct: 726 gtattgtagaagtgaagactagcacgagcacttgcattgataccaagagttcgatgcaat 667

                                                                       
Query: 390 atctgtgcacaatgatgccctgaccgaatcgctatgccatgctggagatcaagaatttct 449
           ||||||||||||||||| ||||||||||| || | |||||||||||| ||||||||||| 
Sbjct: 666 atctgtgcacaatgatggcctgaccgaattgccacgccatgctggaggtcaagaatttcg 607

                                                                       
Query: 450 gcaatatctgttggatgaacattctcaacattgaaagaacataaaggagcacggtgatca 509
           ||||||||||||||||||||||| |||||||| ||||||||||| || || |||||| ||
Sbjct: 606 gcaatatctgttggatgaacattttcaacattaaaagaacataatggggcgcggtgaaca 547

                                                                       
Query: 510 ctctgagaaggcgccggaccatagatacgaacatttggaacggacagaaggctctcataa 569
            | ||  | || || ||||| ||||| |||||||||||||| |  | ||||||||| || 
Sbjct: 546 gtttggcatggagctggaccgtagatccgaacatttggaacagcaataaggctctcgtag 487

                                                                       
Query: 570 aggtaagaccccaactctttctcatactcgtggatcctctgcatgccaaagtgtgacaga 629
           || || | | ||||||| ||||||||||| |||||| ||||||||||||  ||||||| |
Sbjct: 486 agataggtcgccaactcattctcatactcatggatcttctgcatgccaatttgtgacaaa 427

                                                 
Query: 630 taatctatcgcaactcccaatcctatagcttctccaat 667
           ||||| || ||   ||||||||||||||||||||||||
Sbjct: 426 taatcaattgctgttcccaatcctatagcttctccaat 389
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>gb|AY104487.1| Zea mays PCO115502 mRNA sequence
          Length = 803

 Score =  250 bits (126), Expect = 5e-63
 Identities = 300/358 (83%)
 Strand = Plus / Minus

                                                                       
Query: 314 atccacctcctcttttgtgttgtagaagtgaagactagcacgggcgcttgcattgatgcc 373
           ||||||||| |||||||||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct: 591 atccacctcgtcttttgtgttgtagaagtgaagactcgcacgagcacttgcgttgatgcc 532

                                                                       
Query: 374 aagggtgcgatgcaaaatctgtgcacaatgatgccctgaccgaatcgctatgccatgctg 433
           |||||| | |||||| ||||| || || |||||||| ||||||||||||| || ||||||
Sbjct: 531 aagggtcctatgcaagatctgcgcgcagtgatgccccgaccgaatcgctacgctatgctg 472

                                                                       
Query: 434 gagatcaagaatttctgcaatatctgttggatgaacattctcaacattgaaagaacataa 493
            ||||||||||| ||||| |||||||| ||||| || ||||| | |||||| || || ||
Sbjct: 471 cagatcaagaatctctgcgatatctgtaggatggacgttctcgatattgaaggagcacaa 412

                                                                       
Query: 494 aggagcacggtgatcactctgagaaggcgccggaccatagatacgaacatttggaacgga 553
            |||||||||||  || |||| ||||||||||| ||||| ||  | ||||||||||| ||
Sbjct: 411 cggagcacggtggacagtctgggaaggcgccgggccatatatctggacatttggaacaga 352

                                                                       
Query: 554 cagaaggctctcataaaggtaagaccccaactctttctcatactcgtggatcctctgcat 613
            |||||||| || || ||||| | ||||| |||||||||||| |||||||||  || |||
Sbjct: 351 gagaaggctttcgtagaggtatgtccccagctctttctcatattcgtggatctgctccat 292

                                                                     
Query: 614 gccaaagtgtgacagataatctatcgcaactcccaatcctatagcttctccaattgca 671
           ||||| |  ||| | ||| || || ||  |||||| ||||||||||||||||||||||
Sbjct: 291 gccaatgcatgataaatagtcgatggctgctcccagtcctatagcttctccaattgca 234
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  167 bits (84), Expect = 6e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                            
Query: 270      gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
                ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 10962737 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 10962796

                                                                            
Query: 330      gtgttgtagaagtgaagactagcacgggcgcttgcattgatgccaagggtgcgatgcaaa 389
                || ||||||||||||||||||||||| || ||||||||||| ||||| || |||||||| 
Sbjct: 10962797 gtattgtagaagtgaagactagcacgagcacttgcattgataccaagagttcgatgcaat 10962856

                                                            
Query: 390      atctgtgcacaatgatgccctgaccgaatcgctatgccatgctg 433
                ||||||||||||||||| ||||||||||| || | |||||||||
Sbjct: 10962857 atctgtgcacaatgatggcctgaccgaattgccacgccatgctg 10962900



 Score =  107 bits (54), Expect = 5e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                            
Query: 431      ctggagatcaagaatttctgcaatatctgttggatgaacattctcaacattgaaagaaca 490
                |||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 10966982 ctggaggtcaagaatttcggcaatatctgttggatgaacattttcaacattaaaagaaca 10967041

                                                                            
Query: 491      taaaggagcacggtgatcactctgagaaggcgccggaccatagatacgaacatttggaac 550
                ||| || || |||||| || | ||  | || || ||||| ||||| ||||||||||||||
Sbjct: 10967042 taatggggcgcggtgaacagtttggcatggagctggaccgtagatccgaacatttggaac 10967101

                                  
Query: 551      ggacagaaggctctcata 568
                 |  | ||||||||||||
Sbjct: 10967102 agcaataaggctctcata 10967119



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 590      ctcatactcgtggatcctctgcatgccaaagtgtgacagataatctatcgcaactcccaa 649
                ||||||||| |||||| ||||||||||||  ||||||| |||||| || ||   ||||||
Sbjct: 10967314 ctcatactcatggatcttctgcatgccaatttgtgacaaataatcaattgctgttcccaa 10967373

                                  
Query: 650      tcctatagcttctccaat 667
                ||||||||||||||||||
Sbjct: 10967374 tcctatagcttctccaat 10967391
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  167 bits (84), Expect = 6e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                            
Query: 270      gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
                ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 10962436 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 10962495

                                                                            
Query: 330      gtgttgtagaagtgaagactagcacgggcgcttgcattgatgccaagggtgcgatgcaaa 389
                || ||||||||||||||||||||||| || ||||||||||| ||||| || |||||||| 
Sbjct: 10962496 gtattgtagaagtgaagactagcacgagcacttgcattgataccaagagttcgatgcaat 10962555

                                                            
Query: 390      atctgtgcacaatgatgccctgaccgaatcgctatgccatgctg 433
                ||||||||||||||||| ||||||||||| || | |||||||||
Sbjct: 10962556 atctgtgcacaatgatggcctgaccgaattgccacgccatgctg 10962599



 Score =  107 bits (54), Expect = 5e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                            
Query: 431      ctggagatcaagaatttctgcaatatctgttggatgaacattctcaacattgaaagaaca 490
                |||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 10966681 ctggaggtcaagaatttcggcaatatctgttggatgaacattttcaacattaaaagaaca 10966740

                                                                            
Query: 491      taaaggagcacggtgatcactctgagaaggcgccggaccatagatacgaacatttggaac 550
                ||| || || |||||| || | ||  | || || ||||| ||||| ||||||||||||||
Sbjct: 10966741 taatggggcgcggtgaacagtttggcatggagctggaccgtagatccgaacatttggaac 10966800

                                  
Query: 551      ggacagaaggctctcata 568
                 |  | ||||||||||||
Sbjct: 10966801 agcaataaggctctcata 10966818



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 590      ctcatactcgtggatcctctgcatgccaaagtgtgacagataatctatcgcaactcccaa 649
                ||||||||| |||||| ||||||||||||  ||||||| |||||| || ||   ||||||
Sbjct: 10967013 ctcatactcatggatcttctgcatgccaatttgtgacaaataatcaattgctgttcccaa 10967072

                                  
Query: 650      tcctatagcttctccaat 667
                ||||||||||||||||||
Sbjct: 10967073 tcctatagcttctccaat 10967090
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>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 124204

 Score =  167 bits (84), Expect = 6e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                          
Query: 270    gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
              ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 111800 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 111859

                                                                          
Query: 330    gtgttgtagaagtgaagactagcacgggcgcttgcattgatgccaagggtgcgatgcaaa 389
              || ||||||||||||||||||||||| || ||||||||||| ||||| || |||||||| 
Sbjct: 111860 gtattgtagaagtgaagactagcacgagcacttgcattgataccaagagttcgatgcaat 111919

                                                          
Query: 390    atctgtgcacaatgatgccctgaccgaatcgctatgccatgctg 433
              ||||||||||||||||| ||||||||||| || | |||||||||
Sbjct: 111920 atctgtgcacaatgatggcctgaccgaattgccacgccatgctg 111963



 Score =  107 bits (54), Expect = 5e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                          
Query: 431    ctggagatcaagaatttctgcaatatctgttggatgaacattctcaacattgaaagaaca 490
              |||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 116045 ctggaggtcaagaatttcggcaatatctgttggatgaacattttcaacattaaaagaaca 116104

                                                                          
Query: 491    taaaggagcacggtgatcactctgagaaggcgccggaccatagatacgaacatttggaac 550
              ||| || || |||||| || | ||  | || || ||||| ||||| ||||||||||||||
Sbjct: 116105 taatggggcgcggtgaacagtttggcatggagctggaccgtagatccgaacatttggaac 116164

                                
Query: 551    ggacagaaggctctcata 568
               |  | ||||||||||||
Sbjct: 116165 agcaataaggctctcata 116182



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 590    ctcatactcgtggatcctctgcatgccaaagtgtgacagataatctatcgcaactcccaa 649
              ||||||||| |||||| ||||||||||||  ||||||| |||||| || ||   ||||||
Sbjct: 116377 ctcatactcatggatcttctgcatgccaatttgtgacaaataatcaattgctgttcccaa 116436

                                
Query: 650    tcctatagcttctccaat 667
              ||||||||||||||||||
Sbjct: 116437 tcctatagcttctccaat 116454
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>dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H10, full
           insert sequence
          Length = 1344

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                       
Query: 270 gaagtaaggaaatcaatggtagcttttagcccatggatgaaaacatccacctcctctttt 329
           ||||||||||||||||| ||| |||| ||| ||| ||  || ||||||||||||||||| 
Sbjct: 994 gaagtaaggaaatcaatagtatctttcagcgcatcgacaaagacatccacctcctctttg 935

                                                  
Query: 330 gtgttgtagaagtgaagactagcacgggcgcttgcattg 368
           || |||||||||||||||| |||||| || |||||||||
Sbjct: 934 gtattgtagaagtgaagaccagcacgagcacttgcattg 896
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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 528    ccatagatacgaacatttggaacggacagaaggctctcataaaggta 574
              ||||||||||||| |||||| || |||||||| || ||||| |||||
Sbjct: 108614 ccatagatacgaatatttgggactgacagaagcctttcatacaggta 108568



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                               
Query: 321    tcctcttttgtgttgtagaagtgaagactagcacgggcgcttgcattga 369
              ||||| || ||||||||||| |  || |||||||| |||||||||||||
Sbjct: 109362 tcctccttagtgttgtagaaatagaggctagcacgtgcgcttgcattga 109314
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>emb|X53828.1|GGLDHA Chicken LDH-A mRNA for lactate dehydrogenase A chain (EC 1.1.1.27)
          Length = 1575

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 424 tgccatgctggagatcaagaatttct 449
           ||||||||||||||||||| ||||||
Sbjct: 264 tgccatgctggagatcaagcatttct 239
to top
>ref|NM_205284.1| Gallus gallus lactate dehydrogenase A (LDHA), mRNA
          Length = 1575

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 424 tgccatgctggagatcaagaatttct 449
           ||||||||||||||||||| ||||||
Sbjct: 264 tgccatgctggagatcaagcatttct 239
to top
>ref|NM_153800.2| Mus musculus Rho GTPase activating protein 22 (Arhgap22), mRNA
          Length = 2597

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 2090 tatgccatgctggagatcaag 2110
to top
>gb|AY541447.1| Mus musculus GTPase-activating protein p68RacGAP mRNA, complete cds
          Length = 2429

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 1921 tatgccatgctggagatcaag 1941
to top
>gb|BC038272.1| Mus musculus Rho GTPase activating protein 22, mRNA (cDNA clone
            MGC:47316 IMAGE:4237331), complete cds
          Length = 2108

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 1586 tatgccatgctggagatcaag 1606
to top
>ref|XM_740960.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000162.02.0)
           partial mRNA
          Length = 642

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  tttatatataggaaatataaa 67
           |||||||||||||||||||||
Sbjct: 525 tttatatataggaaatataaa 505
to top
>dbj|AK144277.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN
           full-length enriched library, clone:G630005M02
           product:unclassifiable, full insert sequence
          Length = 2258

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 422 tatgccatgctggagatcaag 442
           |||||||||||||||||||||
Sbjct: 719 tatgccatgctggagatcaag 699
to top
>dbj|AK078218.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430517K22 product:hypothetical
            RhoGAP domain/Pleckstrin homology (PH) domain containing
            protein, full insert sequence
          Length = 2485

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 1977 tatgccatgctggagatcaag 1997
to top
>dbj|AK052541.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430047E06 product:Rho GTPase activating
            protein 22, full insert sequence
          Length = 2243

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 1734 tatgccatgctggagatcaag 1754
to top
>dbj|AK046097.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230341L19 product:hypothetical
            RhoGAP domain/Pleckstrin homology (PH) domain containing
            protein, full insert sequence
          Length = 2597

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 2090 tatgccatgctggagatcaag 2110
to top
>gb|AC068286.5| Homo sapiens BAC clone RP11-526G2 from 2, complete sequence
          Length = 137631

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 650   tcctatagcttctccaattgc 670
             |||||||||||||||||||||
Sbjct: 85194 tcctatagcttctccaattgc 85174
to top
>ref|XM_224637.3| PREDICTED: Rattus norvegicus Rho GTPase activating protein 22
            (predicted) (Arhgap22_predicted), mRNA
          Length = 4215

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  tatgccatgctggagatcaag 442
            |||||||||||||||||||||
Sbjct: 3715 tatgccatgctggagatcaag 3735
to top
>gb|AC154649.3| Mus musculus BAC clone RP23-156O5 from chromosome 14, complete sequence
          Length = 227676

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   tatgccatgctggagatcaag 442
             |||||||||||||||||||||
Sbjct: 81269 tatgccatgctggagatcaag 81289
to top
>gb|DQ239897.1| Helicobacter pylori plasmid pAL226, complete sequence
          Length = 9897

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   tataggaaatataaaccgcc 72
            ||||||||||||||||||||
Sbjct: 4610 tataggaaatataaaccgcc 4629
to top
>gb|AY487825.1| Helicobacter pylori strain HUP-B43 plasticity zone, complete sequence
          Length = 33671

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tataggaaatataaaccgcc 72
             ||||||||||||||||||||
Sbjct: 15190 tataggaaatataaaccgcc 15171
to top
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0018N12, complete sequence
          Length = 137127

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   ggagatcaagaatttctgca 452
             ||||||||||||||||||||
Sbjct: 78822 ggagatcaagaatttctgca 78803
to top
>gb|AC149095.2| Pan troglodytes BAC clone CH251-141L12 from Y, complete sequence
          Length = 170577

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   gaatttctgcaatatctgtt 461
             ||||||||||||||||||||
Sbjct: 90098 gaatttctgcaatatctgtt 90079
to top
>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence
          Length = 111561

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   ttatatataggaaatataaa 67
            ||||||||||||||||||||
Sbjct: 2438 ttatatataggaaatataaa 2457
to top
>gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome 12, complete sequence
          Length = 190631

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    acattgaaagaacataaagg 496
              ||||||||||||||||||||
Sbjct: 189654 acattgaaagaacataaagg 189673
to top
>gb|AC002286.1| Homo sapiens Chromosome 16p13.13 cosmid clone 356d7 from the Los
            Alamos Chromosome 16 specific SuperCos cosmid library
            complete genomic sequence, complete sequence
          Length = 12589

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  tgaaaacatccacctcctct 326
            ||||||||||||||||||||
Sbjct: 2135 tgaaaacatccacctcctct 2116
to top
>gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosome 8, complete sequence
          Length = 196490

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    tatgccatgctggagatcaa 441
              ||||||||||||||||||||
Sbjct: 120786 tatgccatgctggagatcaa 120767
to top
>gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome 9, complete sequence
          Length = 181862

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   tatgccatgctggagatcaa 441
             ||||||||||||||||||||
Sbjct: 88104 tatgccatgctggagatcaa 88123
to top
>emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, complete sequence
          Length = 165027

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     aaaattatctcaaaacttcc 110
              ||||||||||||||||||||
Sbjct: 148749 aaaattatctcaaaacttcc 148768
to top
>emb|AL390205.17| Human DNA sequence from clone RP11-15H7 on chromosome 6 Contains an ATP
             synthase H+ transporting mitochondrial F0 complex subunit
             b variant 1 (ATP5F1) pseudogene and a thyroid hormone
             receptor interactor 4 (TRIP4) pseudogene, complete
             sequence
          Length = 155680

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   gaatttctgcaatatctgtt 461
             ||||||||||||||||||||
Sbjct: 58224 gaatttctgcaatatctgtt 58205
to top
>emb|AL390060.14| Human DNA sequence from clone RP11-56H2 on chromosome Xp11.22-11.3
             Contains a pseudogene similar to part of p30 (nuclear
             protein p30), a novel gene and a CpG island, complete
             sequence
          Length = 135378

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   aaaacatccacctcctcttt 328
             ||||||||||||||||||||
Sbjct: 37781 aaaacatccacctcctcttt 37762
to top
>emb|AL022396.1|HS380E11 Human DNA sequence from clone RP3-380E11 on chromosome 6p22.3-24 Contains
              a novel gene and the 5' end of the CD83 gene for CD83
              antigen (activated B lymphocytes, immunoglobulin
              superfamily) and three CpG islands, complete sequence
          Length = 131447

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    atggtagcttttagcccatg 304
              ||||||||||||||||||||
Sbjct: 104544 atggtagcttttagcccatg 104525
to top
>emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC clone B2J23
          Length = 65725

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   atccacctcctcttttgtgt 333
             ||||||||||||||||||||
Sbjct: 24157 atccacctcctcttttgtgt 24176
to top
>gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, complete sequence
          Length = 131487

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    tgaaaacatccacctcctct 326
              ||||||||||||||||||||
Sbjct: 110372 tgaaaacatccacctcctct 110353
to top
>dbj|BS000653.1| Pan troglodytes chromosome Y clone:PTB-017B13, complete sequences
          Length = 157263

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    gaatttctgcaatatctgtt 461
              ||||||||||||||||||||
Sbjct: 116081 gaatttctgcaatatctgtt 116100
to top
>gb|AC090679.5| Homo sapiens 12 BAC RP11-80O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    taatacagtttttatatata 56
             ||||||||||||||||||||
Sbjct: 65027 taatacagtttttatatata 65046
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 442      gaatttctgcaatatctgtt 461
                ||||||||||||||||||||
Sbjct: 14688381 gaatttctgcaatatctgtt 14688362
to top
>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 128860

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    ttatatataggaaatataaa 67
             ||||||||||||||||||||
Sbjct: 23363 ttatatataggaaatataaa 23344
to top
>gb|AC092540.4| Homo sapiens BAC clone RP11-190E23 from 4, complete sequence
          Length = 133801

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     tataatacagtttttatata 54
              ||||||||||||||||||||
Sbjct: 106118 tataatacagtttttatata 106099
to top
>gb|AC097379.2| Homo sapiens BAC clone RP11-277G18 from 4, complete sequence
          Length = 96080

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    ttttatatataggaaatata 65
             ||||||||||||||||||||
Sbjct: 88806 ttttatatataggaaatata 88825
to top
>gb|AC011974.11| Homo sapiens, clone RP11-15L5, complete sequence
          Length = 153168

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   tgaacattctcaacattgaa 484
             ||||||||||||||||||||
Sbjct: 88086 tgaacattctcaacattgaa 88067
to top
>gb|AF039650.4|AF039650 Caenorhabditis elegans acetylcholinesterase (ace-3) mRNA, complete
            cds
          Length = 1824

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  aaacatccacctcctcttttgtgt 333
            ||||||||| ||||||||||||||
Sbjct: 1498 aaacatccatctcctcttttgtgt 1475
to top
>ref|NM_064562.3| Caenorhabditis elegans abnormal ACEtylcholinesterase family member
            (ace-3) (ace-3) mRNA, complete cds
          Length = 2168

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  aaacatccacctcctcttttgtgt 333
            ||||||||| ||||||||||||||
Sbjct: 1547 aaacatccatctcctcttttgtgt 1524
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     ggagatcaagaatttctgca 452
               ||||||||||||||||||||
Sbjct: 5078891 ggagatcaagaatttctgca 5078910
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 81       tacataaccaaaaattatct 100
                ||||||||||||||||||||
Sbjct: 20509976 tacataaccaaaaattatct 20509995
to top
>gb|AC155805.2| Mus musculus BAC clone RP24-341E20 from chromosome 12, complete
           sequence
          Length = 199624

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 attctcaacattgaaagaac 489
           ||||||||||||||||||||
Sbjct: 125 attctcaacattgaaagaac 144
to top
>gb|AY853324.1| Hypocenomyce friesii small subunit ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 768

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 aaaagggtactagataaact 135
           ||||||||||||||||||||
Sbjct: 240 aaaagggtactagataaact 259
to top
>gb|AC007220.4|AC007220 Homo sapiens chromosome 16 clone RP11-396B14, complete sequence
          Length = 172945

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    tgaaaacatccacctcctct 326
              ||||||||||||||||||||
Sbjct: 167108 tgaaaacatccacctcctct 167127
to top
>gb|AC009239.3|AC009239 Homo sapiens BAC clone RP11-470K20 from Y, complete sequence
          Length = 136371

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   gaatttctgcaatatctgtt 461
             ||||||||||||||||||||
Sbjct: 74687 gaatttctgcaatatctgtt 74706
to top
>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence
          Length = 152747

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  aaggaaatcaatggtagctt 294
            ||||||||||||||||||||
Sbjct: 3085 aaggaaatcaatggtagctt 3066
to top
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tacataaccaaaaattatct 100
             ||||||||||||||||||||
Sbjct: 27623 tacataaccaaaaattatct 27642
to top
>emb|AL110490.1|CEY48B6A Caenorhabditis elegans YAC Y48B6A, complete sequence
          Length = 101295

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 310   aaacatccacctcctcttttgtgt 333
             ||||||||| ||||||||||||||
Sbjct: 58486 aaacatccatctcctcttttgtgt 58463
to top
>dbj|AK064107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E10, full
            insert sequence
          Length = 1488

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   tacataaccaaaaattatct 100
            ||||||||||||||||||||
Sbjct: 1485 tacataaccaaaaattatct 1466
to top
>gb|AY639118.1| Helicobacter pylori strain SJM27 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639117.1| Helicobacter pylori strain I-86 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1 gene, conserved
           hypothetical protein IS609-Orf2 pseudogene, putative
           transposase OrfA and putative transposase OrfB genes,
           complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639116.1| Helicobacter pylori strain Alaska97 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639115.1| Helicobacter pylori strain Alaska64 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639114.1| Helicobacter pylori strain AfricaR48 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639113.1| Helicobacter pylori strain HUP-B80 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 830 tataggaaatataaaccgcc 811
to top
>gb|AY639112.1| Helicobacter pylori strain HUP-B79 transposon ISHp609 conserved
            hypothetical protein IS609-Orf1 and conserved
            hypothetical protein IS609-Orf2 genes, putative
            transposase OrfA pseudogene, and putative transposase
            OrfB gene, complete cds
          Length = 3084

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   tataggaaatataaaccgcc 72
            ||||||||||||||||||||
Sbjct: 1140 tataggaaatataaaccgcc 1121
to top
>gb|AY639111.1| Helicobacter pylori strain LitA38 transposon ISHp609 conserved
           hypothetical protein IS609-Orf1, conserved hypothetical
           protein IS609-Orf2, putative transposase OrfA, and
           putative transposase OrfB genes, complete cds
          Length = 2603

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  tataggaaatataaaccgcc 72
           ||||||||||||||||||||
Sbjct: 873 tataggaaatataaaccgcc 854
to top
>gb|AY639110.1| Helicobacter pylori strain LitA7 transposon ISHp609 conserved
            hypothetical protein IS609-Orf1 and conserved
            hypothetical protein IS609-Orf2 genes, putative
            transposase OrfA pseudogene, and putative transposase
            OrfB gene, complete cds
          Length = 2875

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   tataggaaatataaaccgcc 72
            ||||||||||||||||||||
Sbjct: 1236 tataggaaatataaaccgcc 1217
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>gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, complete sequence
          Length = 219579

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    tctcaacattgaaagaacat 491
              ||||||||||||||||||||
Sbjct: 190852 tctcaacattgaaagaacat 190871
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     ggagatcaagaatttctgca 452
               ||||||||||||||||||||
Sbjct: 5145368 ggagatcaagaatttctgca 5145387
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>gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, complete sequence
          Length = 184377

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    tatgccatgctggagatcaa 441
              ||||||||||||||||||||
Sbjct: 134770 tatgccatgctggagatcaa 134789
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>emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chromosome 12, complete
              sequence
          Length = 178789

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    acattgaaagaacataaagg 496
              ||||||||||||||||||||
Sbjct: 110966 acattgaaagaacataaagg 110985
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>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence
          Length = 185933

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   tctcaacattgaaagaacat 491
             ||||||||||||||||||||
Sbjct: 45828 tctcaacattgaaagaacat 45847
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>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    aactgaacaagtgttgggaa 272
              ||||||||||||||||||||
Sbjct: 115940 aactgaacaagtgttgggaa 115959
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>dbj|AB056838.1| Macaca fascicularis brain cDNA clone:QflA-14981, full insert
           sequence
          Length = 2210

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 ctgaacaagtgttgggaagtaagg 278
           |||||||||| |||||||||||||
Sbjct: 391 ctgaacaagttttgggaagtaagg 414
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>dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-288C17, complete
             sequences
          Length = 143259

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   ccacctcctcttttgtgttg 335
             ||||||||||||||||||||
Sbjct: 70129 ccacctcctcttttgtgttg 70110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,977,065
Number of Sequences: 3902068
Number of extensions: 5977065
Number of successful extensions: 107941
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107661
Number of HSP's gapped (non-prelim): 275
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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