ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
2dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
3dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
4dbj|AK068780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
5dbj|AK059213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
6gb|AY109889.1| Zea mays CL7011_1 mRNA sequence 48 0.038
7ref|NM_190021.1| Oryza sativa (japonica cultivar-group), predic... 46 0.15
8gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complet... 44 0.59
9emb|AL606753.12| Human DNA sequence from clone RP11-2P2 on chrom... 44 0.59
10emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete ge... 44 0.59
11gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
12gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromoso... 42 2.3
13emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in ... 42 2.3
14emb|BX247865.15| Zebrafish DNA sequence from clone CH211-205J13 ... 42 2.3
15gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, com... 42 2.3
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17gb|AC016106.7| Homo sapiens chromosome 18, clone RP11-26L13, com... 42 2.3
18emb|BX005399.30| Zebrafish DNA sequence from clone DKEY-3D16 in ... 42 2.3
19emb|CR786581.30| Zebrafish DNA sequence from clone DKEY-179C19 i... 42 2.3
20gb|AC166170.4| Mus musculus BAC clone RP23-174N23 from chromosom... 40 9.2
21gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosom... 40 9.2
22gb|AC084780.10| Mus musculus chromosome 5, clone RP23-212N20, co... 40 9.2
23gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosom... 40 9.2
24ref|XM_851598.1| PREDICTED: Canis familiaris similar to Glycogen... 40 9.2
25gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, co... 40 9.2
26gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's H... 40 9.2
27gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome ... 40 9.2
28emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 9.2
29gb|AC122915.2| Mus musculus BAC clone RP23-27G7 from 5, complete... 40 9.2
30gb|AC163721.4| Mus musculus BAC clone RP23-446B19 from chromosom... 40 9.2
31emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chr... 40 9.2
32emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on ch... 40 9.2
33gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 9.2
34emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 9.2
35gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence 40 9.2
36gb|AC182474.3| Pan troglodytes BAC clone CH251-134M22 from chrom... 40 9.2
37dbj|AB083161.1| Aspergillus awamori GA I mRNA for glucoamylase, ... 40 9.2
38gb|AY117539.1| Cricetulus griseus beta-1,4-galactosyltransferase... 40 9.2
39dbj|AK051489.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 9.2
40gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 9.2
41gb|AC145619.4| Homo sapiens BAC clone RP11-722J20 from chromosom... 40 9.2
42gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, com... 40 9.2
43gb|AC142232.2| Homo sapiens fosmid clone XXFOS-83793A7 from 2, c... 40 9.2
44emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 i... 40 9.2
45emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 ... 40 9.2
46emb|AL139418.9| Human DNA sequence from clone RP4-608O15 on chro... 40 9.2
47emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 i... 40 9.2
48gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 9.2
49gb|AC120423.13| Mus musculus chromosome 6, clone RP24-495D13, co... 40 9.2
50gb|AC109608.14| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 9.2
51gb|AC115807.8| Mus musculus chromosome 8, clone RP23-416E12, com... 40 9.2
52emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on ch... 40 9.2
53emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chr... 40 9.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                            
Query: 599      gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
                |||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| ||
Sbjct: 40851100 gctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaaca 40851159

                            
Query: 659      ggatctgcgcga 670
                 |||||||||||
Sbjct: 40851160 agatctgcgcga 40851171
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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0052O12
          Length = 167881

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 599    gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
              |||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| ||
Sbjct: 153746 gctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaaca 153805

                          
Query: 659    ggatctgcgcga 670
               |||||||||||
Sbjct: 153806 agatctgcgcga 153817
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>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506E04
          Length = 139934

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 599   gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
             |||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| ||
Sbjct: 63206 gctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaaca 63265

                         
Query: 659   ggatctgcgcga 670
              |||||||||||
Sbjct: 63266 agatctgcgcga 63277
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>dbj|AK068780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159E17, full
            insert sequence
          Length = 1946

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 599  gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
            |||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| ||
Sbjct: 1632 gctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaaca 1573

                        
Query: 659  ggatctgcgcga 670
             |||||||||||
Sbjct: 1572 agatctgcgcga 1561
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>dbj|AK059213.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C05, full
            insert sequence
          Length = 1645

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 599  gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
            |||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| ||
Sbjct: 1479 gctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaaca 1420

                        
Query: 659  ggatctgcgcga 670
             |||||||||||
Sbjct: 1419 agatctgcgcga 1408
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>gb|AY109889.1| Zea mays CL7011_1 mRNA sequence
          Length = 652

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 599 gctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagca 658
           |||||||||||||||| |  |  || |||||||||| |||||  | |||||||||||  |
Sbjct: 95  gctagagcttccagtagaggcgagcgcggtggaggacgccggagacgagcgcccagaaga 154

                       
Query: 659 ggatctgcgcga 670
           ||||||||||||
Sbjct: 155 ggatctgcgcga 166
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>ref|NM_190021.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 600  ctagagcttccagtaaaccccggcccggtggaggaggccggcaatgagcgcccagagcag 659
            ||||||||||||||| |  |  || ||||||||||||||||| |  || ||||||| || 
Sbjct: 1293 ctagagcttccagtagaggcgagcacggtggaggaggccggcgacaagggcccagaacaa 1234

                       
Query: 660  gatctgcgcga 670
            |||||||||||
Sbjct: 1233 gatctgcgcga 1223
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>gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complete sequence
          Length = 157321

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 516  tttgcaccttccttgtcttctt 537
            ||||||||||||||||||||||
Sbjct: 8001 tttgcaccttccttgtcttctt 7980
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>emb|AL606753.12| Human DNA sequence from clone RP11-2P2 on chromosome 1 Contains the 5'
             end of the PLXNA2 gene for plexin A2 and a heterogeneous
             nuclear ribonucleoprotein D-like (HNRPDL) pseudogene,
             complete sequence
          Length = 66984

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    ttgcacatagtactctggtttc 37
             ||||||||||||||||||||||
Sbjct: 61751 ttgcacatagtactctggtttc 61772
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>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11
          Length = 302050

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 301    gtggatgatcagaagctaacaa 322
              ||||||||||||||||||||||
Sbjct: 231299 gtggatgatcagaagctaacaa 231278
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   tggatacaagtttatatttct 282
             |||||||||||||||||||||
Sbjct: 75592 tggatacaagtttatatttct 75572
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>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete sequence
          Length = 181509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 550    cacaattccaacacacaagca 570
              |||||||||||||||||||||
Sbjct: 173058 cacaattccaacacacaagca 173078
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>emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in linkage group 8,
             complete sequence
          Length = 222110

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   taggctatactgcttctgctt 421
             |||||||||||||||||||||
Sbjct: 98492 taggctatactgcttctgctt 98472
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>emb|BX247865.15| Zebrafish DNA sequence from clone CH211-205J13 in linkage group 8,
              complete sequence
          Length = 169286

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 401    taggctatactgcttctgctt 421
              |||||||||||||||||||||
Sbjct: 125077 taggctatactgcttctgctt 125097



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   taggctatactgcttctgctt 421
             |||||||||||||||||||||
Sbjct: 62143 taggctatactgcttctgctt 62163



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   taggctatactgcttctgctt 421
             |||||||||||||||||||||
Sbjct: 15301 taggctatactgcttctgctt 15321
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>gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, complete sequence
          Length = 144192

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   agtttcagaaaatcaaagatg 241
             |||||||||||||||||||||
Sbjct: 51592 agtttcagaaaatcaaagatg 51612
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 262      tggatacaagtttatatttct 282
                |||||||||||||||||||||
Sbjct: 19372243 tggatacaagtttatatttct 19372223
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>gb|AC016106.7| Homo sapiens chromosome 18, clone RP11-26L13, complete sequence
          Length = 59320

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  agtttcagaaaatcaaagatg 241
            |||||||||||||||||||||
Sbjct: 5560 agtttcagaaaatcaaagatg 5540
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>emb|BX005399.30| Zebrafish DNA sequence from clone DKEY-3D16 in linkage group 8, complete
              sequence
          Length = 193926

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 401    taggctatactgcttctgctt 421
              |||||||||||||||||||||
Sbjct: 100017 taggctatactgcttctgctt 99997



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   taggctatactgcttctgctt 421
             |||||||||||||||||||||
Sbjct: 14661 taggctatactgcttctgctt 14641
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>emb|CR786581.30| Zebrafish DNA sequence from clone DKEY-179C19 in linkage group 8,
              complete sequence
          Length = 166217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 401    taggctatactgcttctgctt 421
              |||||||||||||||||||||
Sbjct: 120105 taggctatactgcttctgctt 120085
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>gb|AC166170.4| Mus musculus BAC clone RP23-174N23 from chromosome 6, complete sequence
          Length = 216743

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ccataggctatactgcttct 417
              ||||||||||||||||||||
Sbjct: 215145 ccataggctatactgcttct 215164
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>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete
             sequence
          Length = 185965

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   ttcttacacacattctgcac 552
             ||||||||||||||||||||
Sbjct: 51781 ttcttacacacattctgcac 51800
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>gb|AC084780.10| Mus musculus chromosome 5, clone RP23-212N20, complete sequence
          Length = 234357

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tgctagcaatgaaagatgac 157
              ||||||||||||||||||||
Sbjct: 139840 tgctagcaatgaaagatgac 139821
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>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence
          Length = 190523

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 514    cttttgcaccttccttgtcttctt 537
              ||||||||||||||| ||||||||
Sbjct: 117569 cttttgcaccttcctcgtcttctt 117546
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>ref|XM_851598.1| PREDICTED: Canis familiaris similar to Glycogen synthase kinase-3
           beta (GSK-3 beta), transcript variant 4 (LOC478575),
           mRNA
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 582 caataccctcctgggtggct 601
           ||||||||||||||||||||
Sbjct: 542 caataccctcctgggtggct 523
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>gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, complete sequence
          Length = 199837

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    aacagtttcagaaaatcaaa 237
              ||||||||||||||||||||
Sbjct: 101650 aacagtttcagaaaatcaaa 101669
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>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 191106

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    acaatgtgctaatcataagt 338
              ||||||||||||||||||||
Sbjct: 124970 acaatgtgctaatcataagt 124951
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>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence
          Length = 195446

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 514   cttttgcaccttccttgtcttctt 537
             ||||||||||||||| ||||||||
Sbjct: 15230 cttttgcaccttcctcgtcttctt 15207
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 226     cagaaaatcaaagatggcttacta 249
               |||||||||||| |||||||||||
Sbjct: 2975767 cagaaaatcaaaaatggcttacta 2975790
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>gb|AC122915.2| Mus musculus BAC clone RP23-27G7 from 5, complete sequence
          Length = 220145

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tgctagcaatgaaagatgac 157
              ||||||||||||||||||||
Sbjct: 187941 tgctagcaatgaaagatgac 187922
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>gb|AC163721.4| Mus musculus BAC clone RP23-446B19 from chromosome 13, complete sequence
          Length = 184728

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 533    ttcttacacacattctgcac 552
              ||||||||||||||||||||
Sbjct: 166486 ttcttacacacattctgcac 166505
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>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a
             novel pseudogene, part of the KCNQ5 gene for potassium
             voltage-gated channel KQT-like subfamily member 5, and a
             phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene,
             complete sequence
          Length = 154998

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   ttgaaatgcttttgcacctt 525
             ||||||||||||||||||||
Sbjct: 59414 ttgaaatgcttttgcacctt 59433
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>emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on chromosome 9, complete
              sequence
          Length = 177425

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 212    cttgcgaacagtttcagaaaatcaaaga 239
              |||| |||||| ||||||||||||||||
Sbjct: 125519 cttgagaacagcttcagaaaatcaaaga 125492
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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    acaatgtgctaatcataagt 338
              ||||||||||||||||||||
Sbjct: 121972 acaatgtgctaatcataagt 121991
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    aaccccggcccggtggagga 634
              ||||||||||||||||||||
Sbjct: 196440 aaccccggcccggtggagga 196459
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>gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence
          Length = 47743

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gcgaacagtttcagaaaatc 234
             ||||||||||||||||||||
Sbjct: 35585 gcgaacagtttcagaaaatc 35604
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>gb|AC182474.3| Pan troglodytes BAC clone CH251-134M22 from chromosome 1, complete
              sequence
          Length = 152000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    aaatcaaagatggcttacta 249
              ||||||||||||||||||||
Sbjct: 129326 aaatcaaagatggcttacta 129307
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>dbj|AB083161.1| Aspergillus awamori GA I mRNA for glucoamylase, complete cds
          Length = 2113

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 577 gacaccaataccctcctggg 596
           ||||||||||||||||||||
Sbjct: 863 gacaccaataccctcctggg 882
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>gb|AY117539.1| Cricetulus griseus beta-1,4-galactosyltransferase 5 mRNA, complete
           cds
          Length = 1255

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gaacagtttcagaaaatcaa 236
           ||||||||||||||||||||
Sbjct: 841 gaacagtttcagaaaatcaa 860
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>dbj|AK051489.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130052E20
            product:unclassifiable, full insert sequence
          Length = 4419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 533  ttcttacacacattctgcac 552
            ||||||||||||||||||||
Sbjct: 1554 ttcttacacacattctgcac 1535
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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    acaatgtgctaatcataagt 338
              ||||||||||||||||||||
Sbjct: 111426 acaatgtgctaatcataagt 111407
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>gb|AC145619.4| Homo sapiens BAC clone RP11-722J20 from chromosome 2, complete sequence
          Length = 152973

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    ttgaaatgcttttgcacctt 525
              ||||||||||||||||||||
Sbjct: 138149 ttgaaatgcttttgcacctt 138168
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>gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, complete sequence
          Length = 217521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    gacagttggatcagactgtg 303
              ||||||||||||||||||||
Sbjct: 118881 gacagttggatcagactgtg 118900
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>gb|AC142232.2| Homo sapiens fosmid clone XXFOS-83793A7 from 2, complete sequence
          Length = 38599

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   ttgaaatgcttttgcacctt 525
             ||||||||||||||||||||
Sbjct: 25375 ttgaaatgcttttgcacctt 25394
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>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20,
             complete sequence
          Length = 221849

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   acacacattctgcacaattc 557
             ||||||||||||||||||||
Sbjct: 77377 acacacattctgcacaattc 77396
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>emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 in linkage group 17,
              complete sequence
          Length = 206778

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 337    gttaacaaatgtgacattctagat 360
              |||||||||||||||||| |||||
Sbjct: 184281 gttaacaaatgtgacattttagat 184304
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>emb|AL139418.9| Human DNA sequence from clone RP4-608O15 on chromosome 1 Contains the
             5' end of FHR5 gene for factor H-related protein 5, the
             HFL3 gene for H factor (complement)-like 3 protein and the
             3' end of the FHR-4 gene for the complement factor
             H-related protein 4, complete sequence
          Length = 83166

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatcaaagatggcttacta 249
             ||||||||||||||||||||
Sbjct: 55517 aaatcaaagatggcttacta 55536
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>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9,
             complete sequence
          Length = 201771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   cattctagattgctaattac 370
             ||||||||||||||||||||
Sbjct: 72658 cattctagattgctaattac 72677
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 152    gatgactcggctggcattggattt 175
              |||| |||||||||||||||||||
Sbjct: 945201 gatggctcggctggcattggattt 945224
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>gb|AC120423.13| Mus musculus chromosome 6, clone RP24-495D13, complete sequence
          Length = 158246

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ccataggctatactgcttct 417
              ||||||||||||||||||||
Sbjct: 110445 ccataggctatactgcttct 110464
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>gb|AC109608.14| Mus musculus strain C57BL/6J chromosome 5 clone rp23-154k6, complete
              sequence
          Length = 216195

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 445    ctcactaggtgcagcccttgtagc 468
              |||||||||||||| |||||||||
Sbjct: 101795 ctcactaggtgcaggccttgtagc 101818
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>gb|AC115807.8| Mus musculus chromosome 8, clone RP23-416E12, complete sequence
          Length = 190509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    ttctggacagttggatcaga 298
              ||||||||||||||||||||
Sbjct: 133823 ttctggacagttggatcaga 133804
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>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete
              sequence
          Length = 212233

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    gacagttggatcagactgtg 303
              ||||||||||||||||||||
Sbjct: 203942 gacagttggatcagactgtg 203923
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>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete
              sequence
          Length = 229583

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    aagatgactcggctggcatt 169
              ||||||||||||||||||||
Sbjct: 159019 aagatgactcggctggcatt 159000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,014,852
Number of Sequences: 3902068
Number of extensions: 6014852
Number of successful extensions: 130609
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130316
Number of HSP's gapped (non-prelim): 286
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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