ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192526.1| Oryza sativa (japonica cultivar-group), predic... 212 1e-51
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 212 1e-51
3dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 212 1e-51
4dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 212 1e-51
5dbj|AK099180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
6dbj|AK071353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
7gb|AY107731.1| Zea mays PCO069957 mRNA sequence 212 1e-51
8ref|NM_106132.2| Arabidopsis thaliana CPK30; calcium- and calmod... 48 0.039
9ref|NM_106131.2| Arabidopsis thaliana unknown protein AT1G74730 ... 48 0.039
10gb|AF386985.1|AF386985 Arabidopsis thaliana Unknown protein mRNA... 48 0.039
11gb|AY088988.1| Arabidopsis thaliana clone 12408 mRNA, complete s... 48 0.039
12gb|BT002152.1| Arabidopsis thaliana Unknown protein (At1g74730) ... 48 0.039
13gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 ... 48 0.039
14emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 46 0.15
15emb|AL139814.13| Human DNA sequence from clone RP11-211E5 on chr... 46 0.15
16gb|DQ106887.1| Staphylococcus aureus strain M03-68 type-IVg SCCm... 44 0.61
17gb|AY271717.1| Staphylococcus aureus SCCmec type IVc element, co... 44 0.61
18ref|XM_505854.1| Yarrowia lipolytica CLIB122, YALI0F25091g predi... 44 0.61
19emb|AJ810120.1| Staphylococcus aureus DNA, type IIE Staphylococc... 44 0.61
20dbj|D86934.2| Staphylococcus aureus DNA, resistance island Type-... 44 0.61
21dbj|AB033763.2| Staphylococcus aureus DNA, type-I staphylococcca... 44 0.61
22dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 44 0.61
23gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 44 0.61
24gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 44 0.61
25emb|BX841924.1|CNS09Y5J Arabidopsis thaliana Full-length cDNA Co... 44 0.61
26gb|AF181950.1|AF181950 Staphylococcus aureus pUB110 low afinity ... 44 0.61
27dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 44 0.61
28dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 44 0.61
29gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 44 0.61
30emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 44 0.61
31dbj|AB063172.2| Staphylococcus aureus DNA, type-IV staphylococca... 44 0.61
32dbj|AB063173.1| Staphylococcus aureus DNA, type-IV staphylococca... 44 0.61
33emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 44 0.61
34gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome... 42 2.4
35gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome ... 42 2.4
36emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 42 2.4
37gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
38gb|U41542.2| Caenorhabditis elegans cosmid C07A12, complete sequ... 42 2.4
39gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 2.4
40emb|BX842655.1| Bdellovibrio bacteriovorus complete genome, stra... 42 2.4
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
42gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 m... 42 2.4
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
44ref|NM_004745.3| Homo sapiens discs, large (Drosophila) homolog-... 40 9.5
45gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.5
46gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 9.5
47ref|XM_870197.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 9.5
48ref|NM_025106.2| Homo sapiens splA/ryanodine receptor domain and... 40 9.5
49gb|BC015711.1| Homo sapiens splA/ryanodine receptor domain and S... 40 9.5
50emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 9.5
51gb|AC126333.7| Homo sapiens chromosome 8, clone RP11-666I19, com... 40 9.5
52gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, compl... 40 9.5
53gb|AY386294.1| Chaoborus flavicans clone A1/d2 microsatellite se... 40 9.5
54emb|CR759903.8| Zebrafish DNA sequence from clone CH211-138E6 in... 40 9.5
55gb|AC137823.45| Medicago truncatula clone mth2-14c17, complete s... 40 9.5
56gb|AF188030.5| Homo sapiens chromosome 8 clone RP4-593A12 map p2... 40 9.5
57gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p2... 40 9.5
58emb|AL136359.13| Human DNA sequence from clone RP11-24H2 on chro... 40 9.5
59emb|AL008734.10|HS324M8 Human DNA sequence from clone RP3-324M8 ... 40 9.5
60ref|XM_966193.1| PREDICTED: Tribolium castaneum similar to Mothe... 40 9.5
61ref|XM_965940.1| PREDICTED: Tribolium castaneum similar to Mothe... 40 9.5
62emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 9.5
63emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 9.5
64emb|CR352338.7| Zebrafish DNA sequence from clone CH211-196L11 i... 40 9.5
65emb|BX088715.9| Zebrafish DNA sequence from clone CH211-194B1 in... 40 9.5
66gb|AY271631.1| Amycolatopsis lactamdurans isolate AAL17 putative... 40 9.5
67gb|AF119818.1| Homo sapiens discs, large (Drosophila) homolog-as... 40 9.5
68gb|AF119817.1| Homo sapiens discs, large (Drosophila) homolog-as... 40 9.5
69emb|CR609804.1| full-length cDNA clone CS0DI075YP10 of Placenta ... 40 9.5
70gb|AF436808.1| Rhynchophora phillipsonii Acc 2 tRNA-Leu (trnL) a... 40 9.5
71gb|AF436807.1| Rhynchophora phillipsonii Acc 1 tRNA-Leu (trnL) a... 40 9.5
72gb|AF436806.1| Microsteira sp. Davis et al. 38-01 tRNA-Leu (trnL... 40 9.5
73gb|AF436805.1| Madagasikaria andersonii tRNA-Leu (trnL) and tRNA... 40 9.5
74gb|AC097014.2| Homo sapiens chromosome 3 clone RP11-29M1, comple... 40 9.5
75gb|AF350959.1|AF350959 Mascagnia sepium tRNA-Leu (trnL) and tRNA... 40 9.5
76gb|AF350958.1|AF350958 Rhynchophora phillipsonii tRNA-Leu (trnL)... 40 9.5
77gb|AF350957.1|AF350957 Malpighia emarginata tRNA-Leu (trnL) and ... 40 9.5
78gb|AF350956.1|AF350956 Malpighia stevensii tRNA-Leu (trnL) and t... 40 9.5
79gb|AF350955.1|AF350955 Triaspis hypericoides tRNA-Leu (trnL) and... 40 9.5
80gb|AF350954.1|AF350954 Caucanthus auriculatus tRNA-Leu (trnL) an... 40 9.5
81gb|AF350953.1|AF350953 Aspidopterys elliptica tRNA-Leu (trnL) an... 40 9.5
82gb|AF009204.1|AF009204 Homo sapiens PSD-95/SAP90-associated prot... 40 9.5
83gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 9.5
84gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl... 40 9.5
85ref|XM_571720.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 9.5
86ref|XM_571719.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 9.5
87gb|AC020893.6| Homo sapiens chromosome 5 clone CTC-250P20, compl... 40 9.5
88gb|AC010969.11| Homo sapiens BAC clone RP11-95D17 from 2, comple... 40 9.5
89gb|AC117515.8| Homo sapiens 3 BAC RP11-797J6 (Roswell Park Cance... 40 9.5
90emb|AL954845.21| Zebrafish DNA sequence from clone DKEY-30H3, co... 40 9.5
91gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell P... 40 9.5
92gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 9.5
93emb|AJ234696.1|HVU234696 Hordeum vulgare genomic DNA fragment; c... 40 9.5
94dbj|AK026046.1| Homo sapiens cDNA: FLJ22393 fis, clone HRC07880 40 9.5
95gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 9.5
96gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.5
97gb|U87679.1|HGU87679 Hepatitis G virus isolate E3 envelope prote... 40 9.5
98dbj|AB209559.1| Homo sapiens mRNA for SPRY domain-containing SOC... 40 9.5
99emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chr... 40 9.5
100dbj|AB000275.1| Homo sapiens mRNA for DAP-2, partial cds 40 9.5
101emb|AL805971.6| Mouse DNA sequence from clone RP23-143H1 on chro... 40 9.5 
>ref|NM_192526.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 564

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Minus

                                                                       
Query: 540 ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
           |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 360 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 301

                                                                       
Query: 600 cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
           ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 300 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 241

                                              
Query: 660 gctcagcaccttgcgcttctccagcttcttgaaca 694
           |||||||||||| ||| ||||||||||||||||||
Sbjct: 240 gctcagcaccttccgcctctccagcttcttgaaca 206
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Plus

                                                                            
Query: 540      ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
                |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 22750998 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 22751057

                                                                            
Query: 600      cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
                ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 22751058 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 22751117

                                                   
Query: 660      gctcagcaccttgcgcttctccagcttcttgaaca 694
                |||||||||||| ||| ||||||||||||||||||
Sbjct: 22751118 gctcagcaccttccgcctctccagcttcttgaaca 22751152
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>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0024F06
          Length = 129402

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Plus

                                                                          
Query: 540    ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
              |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 127710 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 127769

                                                                          
Query: 600    cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
              ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 127770 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 127829

                                                 
Query: 660    gctcagcaccttgcgcttctccagcttcttgaaca 694
              |||||||||||| ||| ||||||||||||||||||
Sbjct: 127830 gctcagcaccttccgcctctccagcttcttgaaca 127864
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Plus

                                                                         
Query: 540   ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
             |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 68387 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 68446

                                                                         
Query: 600   cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
             ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 68447 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 68506

                                                
Query: 660   gctcagcaccttgcgcttctccagcttcttgaaca 694
             |||||||||||| ||| ||||||||||||||||||
Sbjct: 68507 gctcagcaccttccgcctctccagcttcttgaaca 68541
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>dbj|AK099180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103B06, full
           insert sequence
          Length = 686

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Minus

                                                                       
Query: 540 ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
           |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 398 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 339

                                                                       
Query: 600 cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
           ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 338 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 279

                                              
Query: 660 gctcagcaccttgcgcttctccagcttcttgaaca 694
           |||||||||||| ||| ||||||||||||||||||
Sbjct: 278 gctcagcaccttccgcctctccagcttcttgaaca 244
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>dbj|AK071353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094M23, full
           insert sequence
          Length = 754

 Score =  212 bits (107), Expect = 1e-51
 Identities = 143/155 (92%)
 Strand = Plus / Minus

                                                                       
Query: 540 ctcgacgaggctgaggagtcccaggtcctcggccttggagagcagtccgagcttctccag 599
           |||||||||||||||||| || |||||||||||||||||||| || ||||||| ||| ||
Sbjct: 414 ctcgacgaggctgaggaggccgaggtcctcggccttggagaggaggccgagctcctcgag 355

                                                                       
Query: 600 cgaggagagcgtgacgccgagctcctccgccttggacagcagccctgccttctcgacggt 659
           ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||
Sbjct: 354 cgaggagagcgtgacgccgagctcctccgccctggacagcagcccggccttctccaccgt 295

                                              
Query: 660 gctcagcaccttgcgcttctccagcttcttgaaca 694
           |||||||||||| ||| ||||||||||||||||||
Sbjct: 294 gctcagcaccttccgcctctccagcttcttgaaca 260
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>gb|AY107731.1| Zea mays PCO069957 mRNA sequence
          Length = 925

 Score =  212 bits (107), Expect = 1e-51
 Identities = 215/251 (85%)
 Strand = Plus / Minus

                                                                       
Query: 444 ggagtcgtccggcacgaagacgaccgtggctatggaggcgacgagcagcggcagcgacag 503
           ||||||||| ||||||| ||| |||| ||| | || ||| ||||| ||||||||||| | 
Sbjct: 555 ggagtcgtcgggcacgacgaccaccgcggcgacggcggccacgaggagcggcagcgagat 496

                                                                       
Query: 504 cgatgcgagcacggccggggacactgtggctgcgctctcgacgaggctgaggagtcccag 563
            || ||||| |||| |||||||      || ||| |||||||||||||||| || |||||
Sbjct: 495 ggaggcgaggacggacggggacgtccccgccgcggtctcgacgaggctgagcaggcccag 436

                                                                       
Query: 564 gtcctcggccttggagagcagtccgagcttctccagcgaggagagcgtgacgccgagctc 623
           ||||||||||||||||||||| || ||||||||||||||||||||||| | ||| |||||
Sbjct: 435 gtcctcggccttggagagcaggcccagcttctccagcgaggagagcgtcaggcccagctc 376

                                                                       
Query: 624 ctccgccttggacagcagccctgccttctcgacggtgctcagcaccttgcgcttctccag 683
           ||| |||||||||||||| || |||||||| |||||||||||||||||||||  ||||||
Sbjct: 375 ctcggccttggacagcaggccggccttctccacggtgctcagcaccttgcgccgctccag 316

                      
Query: 684 cttcttgaaca 694
           |||||||||||
Sbjct: 315 cttcttgaaca 305



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 346 tcctgcagtccatcgagcacgacagagccgacgaacagccc 386
           |||||||| ||| |||||||||||||||| |||||||||||
Sbjct: 653 tcctgcaggccagcgagcacgacagagcccacgaacagccc 613
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>ref|NM_106132.2| Arabidopsis thaliana CPK30; calcium- and calmodulin-dependent protein
            kinase/ kinase/ protein kinase AT1G74740 (CPK30) mRNA,
            complete cds
          Length = 2550

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 649  ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
            ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 2475 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 2518
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>ref|NM_106131.2| Arabidopsis thaliana unknown protein AT1G74730 mRNA, complete cds
          Length = 1178

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 649 ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
           ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 348 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 305
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>gb|AF386985.1|AF386985 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 784

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 649 ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
           ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 315 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 272
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>gb|AY088988.1| Arabidopsis thaliana clone 12408 mRNA, complete sequence
          Length = 812

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 649 ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
           ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 348 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 305
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>gb|BT002152.1| Arabidopsis thaliana Unknown protein (At1g74730) mRNA, complete cds
          Length = 639

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 649 ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
           ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 284 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 241
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>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence
          Length = 115721

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 649   ttctcgacggtgctcagcaccttgcgcttctccagcttcttgaa 692
             ||||| ||| |||||| ||| || ||||||||||||||||||||
Sbjct: 95512 ttctcaacgttgctcaacacttttcgcttctccagcttcttgaa 95555
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>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 465   gaccgtggctatggaggcgacgagcagcggc 495
             ||||||||| ||| |||||||||||||||||
Sbjct: 75098 gaccgtggcgatgaaggcgacgagcagcggc 75068
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>emb|AL139814.13| Human DNA sequence from clone RP11-211E5 on chromosome 10p12.1-12.33
            Contains part of the CACNB2 gene for calcium channel
            voltage-dependent beta 2 subunit, complete sequence
          Length = 119884

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 29   taaaaatattcccagtattaacatttt 55
            |||||||||| ||||||||||||||||
Sbjct: 4509 taaaaatattgccagtattaacatttt 4483
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>gb|DQ106887.1| Staphylococcus aureus strain M03-68 type-IVg SCCmec element, complete
             sequence
          Length = 23157

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 21788 ttcaaaagttacaaaaacatcc 21767
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>gb|AY271717.1| Staphylococcus aureus SCCmec type IVc element, complete sequence
          Length = 24106

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 23005 ttcaaaagttacaaaaacatcc 22984
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>ref|XM_505854.1| Yarrowia lipolytica CLIB122, YALI0F25091g predicted mRNA
          Length = 3024

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 669  cttgcgcttctccagcttcttg 690
            ||||||||||||||||||||||
Sbjct: 2694 cttgcgcttctccagcttcttg 2673
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>emb|AJ810120.1| Staphylococcus aureus DNA, type IIE Staphylococcal Cassette Chromosome
             mec (SCCmec), strain AR13.1/3330.2
          Length = 27029

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 25915 ttcaaaagttacaaaaacatcc 25894
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>dbj|D86934.2| Staphylococcus aureus DNA, resistance island Type-II
             SCCmec(Staphylococcal cassette chromosome mec)
          Length = 58237

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 56712 ttcaaaagttacaaaaacatcc 56691
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>dbj|AB033763.2| Staphylococcus aureus DNA, type-I staphylococccal cassette chromosome
             mec, strain:NCTC10442
          Length = 39332

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 38028 ttcaaaagttacaaaaacatcc 38007
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35096 ttcaaaagttacaaaaacatcc 35117
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35013 ttcaaaagttacaaaaacatcc 35034
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35115 ttcaaaagttacaaaaacatcc 35136
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>emb|BX841924.1|CNS09Y5J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL46ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 757

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 659 tgctcagcaccttgcgcttctccagcttcttgaa 692
           |||||| ||| || ||||||||||||||||||||
Sbjct: 325 tgctcaacacttttcgcttctccagcttcttgaa 292
to top
>gb|AF181950.1|AF181950 Staphylococcus aureus pUB110 low afinity penicillin binding protein
            (mecA) gene, partial cds; truncated hypervariable region,
            complete sequence; kanamycin resistance protein (aadD),
            bleomycin resistance protein (ble), beta protein (rec),
            alpha protein (rep), orf1260, and orfX genes, complete
            cds; and insertion sequence IS431 transposase, complete
            cds
          Length = 15897

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 101  ttcaaaagttacaaaaacatcc 122
            ||||||||||||||||||||||
Sbjct: 9667 ttcaaaagttacaaaaacatcc 9646
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
             strain:MW2
          Length = 2820462

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35092 ttcaaaagttacaaaaacatcc 35113



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ttcaaaagttacaaaaacat 120
             ||||||||||||||||||||
Sbjct: 59115 ttcaaaagttacaaaaacat 59134
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35095 ttcaaaagttacaaaaacatcc 35116
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 101     ttcaaaagttacaaaaacatcc 122
               ||||||||||||||||||||||
Sbjct: 2583252 ttcaaaagttacaaaaacatcc 2583231
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 35063 ttcaaaagttacaaaaacatcc 35084
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>dbj|AB063172.2| Staphylococcus aureus DNA, type-IV staphylococcal cassette chromosome
             mec, strain:CA05(JCSC1968)
          Length = 26090

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 24282 ttcaaaagttacaaaaacatcc 24261
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>dbj|AB063173.1| Staphylococcus aureus DNA, type-IV staphylococcal cassette chromosome
             mec, strain:JCSC1978(8/6-3P)
          Length = 21777

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   ttcaaaagttacaaaaacatcc 122
             ||||||||||||||||||||||
Sbjct: 20279 ttcaaaagttacaaaaacatcc 20258
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 669     cttgcgcttctccagcttcttg 690
               ||||||||||||||||||||||
Sbjct: 3243461 cttgcgcttctccagcttcttg 3243440
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>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence
          Length = 179458

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     cttgtttttgaaagtgaaaacctca 99
              ||||| |||||||||||||||||||
Sbjct: 162192 cttgtgtttgaaagtgaaaacctca 162168
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>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence
          Length = 234717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     cttgtttttgaaagtgaaaacctca 99
              ||||| |||||||||||||||||||
Sbjct: 100720 cttgtgtttgaaagtgaaaacctca 100696
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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 610    gtgacgccgagctcctccgcc 630
              |||||||||||||||||||||
Sbjct: 185352 gtgacgccgagctcctccgcc 185332
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 82    ttgaaagtgaaaacctcagttcaaa 106
             |||||||||||||||| ||||||||
Sbjct: 87501 ttgaaagtgaaaacctgagttcaaa 87525
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>gb|U41542.2| Caenorhabditis elegans cosmid C07A12, complete sequence
          Length = 45529

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    cttgtttttgaaagtgaaaac 95
             |||||||||||||||||||||
Sbjct: 13226 cttgtttttgaaagtgaaaac 13246
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 652     tcgacggtgctcagcaccttg 672
               |||||||||||||||||||||
Sbjct: 3745595 tcgacggtgctcagcaccttg 3745615
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>emb|BX842655.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 10/11
          Length = 349965

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    atatctgaaatctgaatctga 231
              |||||||||||||||||||||
Sbjct: 135847 atatctgaaatctgaatctga 135827
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 82       ttgaaagtgaaaacctcagttcaaa 106
                |||||||||||||||| ||||||||
Sbjct: 22253797 ttgaaagtgaaaacctgagttcaaa 22253773
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>gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 map 4q25, complete sequence
          Length = 134187

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   gaagtgggtgaaaatcaaatg 200
             |||||||||||||||||||||
Sbjct: 17336 gaagtgggtgaaaatcaaatg 17356
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 82       ttgaaagtgaaaacctcagttcaaa 106
                |||||||||||||||| ||||||||
Sbjct: 22563708 ttgaaagtgaaaacctgagttcaaa 22563684
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>ref|NM_004745.3| Homo sapiens discs, large (Drosophila) homolog-associated protein 2
            (DLGAP2), mRNA
          Length = 10101

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 618  gagctcctccgccttggaca 637
            ||||||||||||||||||||
Sbjct: 1984 gagctcctccgccttggaca 1965
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
            sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  cagcggcagcgacagcgatg 508
            ||||||||||||||||||||
Sbjct: 7697 cagcggcagcgacagcgatg 7716
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     gccgagctcctccgccttgg 634
               ||||||||||||||||||||
Sbjct: 1518583 gccgagctcctccgccttgg 1518564
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>ref|XM_870197.1| PREDICTED: Bos taurus hypothetical protein LOC617871 (LOC617871),
           mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 487 agcagcggcagcgacagcga 506
           ||||||||||||||||||||
Sbjct: 742 agcagcggcagcgacagcga 761
to top
>ref|NM_025106.2| Homo sapiens splA/ryanodine receptor domain and SOCS box containing
           1 (SPSB1), mRNA
          Length = 3081

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 tcctcggccttggagagcag 584
           ||||||||||||||||||||
Sbjct: 97  tcctcggccttggagagcag 116
to top
>gb|BC015711.1| Homo sapiens splA/ryanodine receptor domain and SOCS box containing
           1, mRNA (cDNA clone MGC:16798 IMAGE:3916157), complete
           cds
          Length = 3081

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 tcctcggccttggagagcag 584
           ||||||||||||||||||||
Sbjct: 97  tcctcggccttggagagcag 116
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 668    ccttgcgcttctccagcttc 687
              ||||||||||||||||||||
Sbjct: 128505 ccttgcgcttctccagcttc 128524
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>gb|AC126333.7| Homo sapiens chromosome 8, clone RP11-666I19, complete sequence
          Length = 127374

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 618   gagctcctccgccttggaca 637
             ||||||||||||||||||||
Sbjct: 40788 gagctcctccgccttggaca 40807
to top
>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence
          Length = 164190

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   tatcctactacaaaacaaac 311
             ||||||||||||||||||||
Sbjct: 98457 tatcctactacaaaacaaac 98476
to top
>gb|AY386294.1| Chaoborus flavicans clone A1/d2 microsatellite sequence
          Length = 253

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  agttcaaaagttacaaaaac 118
           ||||||||||||||||||||
Sbjct: 238 agttcaaaagttacaaaaac 219
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>emb|CR759903.8| Zebrafish DNA sequence from clone CH211-138E6 in linkage group 9,
             complete sequence
          Length = 168689

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   actacaaaacaaacatatac 317
             ||||||||||||||||||||
Sbjct: 97510 actacaaaacaaacatatac 97529
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>gb|AC137823.45| Medicago truncatula clone mth2-14c17, complete sequence
          Length = 135139

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    aaaacaaacatatactccat 322
              ||||||||||||||||||||
Sbjct: 104894 aaaacaaacatatactccat 104913
to top
>gb|AF188030.5| Homo sapiens chromosome 8 clone RP4-593A12 map p23, complete sequence
          Length = 151329

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 618   gagctcctccgccttggaca 637
             ||||||||||||||||||||
Sbjct: 75434 gagctcctccgccttggaca 75415
to top
>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence
          Length = 261151

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gagctcctccgccttggaca 637
              ||||||||||||||||||||
Sbjct: 243817 gagctcctccgccttggaca 243798
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>emb|AL136359.13| Human DNA sequence from clone RP11-24H2 on chromosome 13 Contains a
             pseudogene similar to part of protocadherin 8 (PCDH8), a
             novel gene and a CpG island, complete sequence
          Length = 176056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   agtgggtgaaaatcaaatgg 201
             ||||||||||||||||||||
Sbjct: 61595 agtgggtgaaaatcaaatgg 61576
to top
>emb|AL008734.10|HS324M8 Human DNA sequence from clone RP3-324M8 on chromosome 1p36.2-36.3
             Contains the 5' end of the gene for a novel SPRY domain
             containing protein and a CpG island, complete sequence
          Length = 85116

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   tcctcggccttggagagcag 584
             ||||||||||||||||||||
Sbjct: 73614 tcctcggccttggagagcag 73595
to top
>ref|XM_966193.1| PREDICTED: Tribolium castaneum similar to Mothers against dpp
           protein (LOC659927), mRNA
          Length = 1805

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 668 ccttgcgcttctccagcttcttga 691
           |||||||||||| |||||||||||
Sbjct: 220 ccttgcgcttcttcagcttcttga 197
to top
>ref|XM_965940.1| PREDICTED: Tribolium castaneum similar to Mothers against dpp
           protein (LOC659654), mRNA
          Length = 1808

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 668 ccttgcgcttctccagcttcttga 691
           |||||||||||| |||||||||||
Sbjct: 220 ccttgcgcttcttcagcttcttga 197
to top
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ttcaaaagttacaaaaacat 120
             ||||||||||||||||||||
Sbjct: 57822 ttcaaaagttacaaaaacat 57841
to top
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 20/20
          Length = 88037

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   gccggggacactgtggctgc 536
             ||||||||||||||||||||
Sbjct: 32721 gccggggacactgtggctgc 32702
to top
>emb|CR352338.7| Zebrafish DNA sequence from clone CH211-196L11 in linkage group 11,
            complete sequence
          Length = 209840

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   tgtttttgaaagtgaaaacc 96
            ||||||||||||||||||||
Sbjct: 3423 tgtttttgaaagtgaaaacc 3404
to top
>emb|BX088715.9| Zebrafish DNA sequence from clone CH211-194B1 in linkage group 3,
             complete sequence
          Length = 153585

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 271   agcagtggtcgactggtggtgtat 294
             ||||||||| ||||||||||||||
Sbjct: 23301 agcagtggtggactggtggtgtat 23278
to top
>gb|AY271631.1| Amycolatopsis lactamdurans isolate AAL17 putative NRPS gene,
           partial cds
          Length = 684

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 561 caggtcctcggccttggagagcag 584
           |||||||||| |||||||||||||
Sbjct: 107 caggtcctcgaccttggagagcag 84
to top
>gb|AF119818.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2
            (DLGAP2) mRNA, alternatively spliced, partial cds
          Length = 10141

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 618  gagctcctccgccttggaca 637
            ||||||||||||||||||||
Sbjct: 2021 gagctcctccgccttggaca 2002
to top
>gb|AF119817.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2
            (DLGAP2) mRNA, alternatively spliced, complete cds
          Length = 10126

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 618  gagctcctccgccttggaca 637
            ||||||||||||||||||||
Sbjct: 2006 gagctcctccgccttggaca 1987
to top
>emb|CR609804.1| full-length cDNA clone CS0DI075YP10 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 3039

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 tcctcggccttggagagcag 584
           ||||||||||||||||||||
Sbjct: 129 tcctcggccttggagagcag 148
to top
>gb|AF436808.1| Rhynchophora phillipsonii Acc 2 tRNA-Leu (trnL) and tRNA-Phe (trnF)
           genes, partial sequence; chloroplast genes for
           chloroplast products
          Length = 952

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
to top
>gb|AF436807.1| Rhynchophora phillipsonii Acc 1 tRNA-Leu (trnL) and tRNA-Phe (trnF)
           genes, partial sequence; chloroplast genes for
           chloroplast products
          Length = 952

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
to top
>gb|AF436806.1| Microsteira sp. Davis et al. 38-01 tRNA-Leu (trnL) and tRNA-Phe
           (trnF) genes, partial sequence; chloroplast genes for
           chloroplast products
          Length = 957

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
to top
>gb|AF436805.1| Madagasikaria andersonii tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 951

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
to top
>gb|AC097014.2| Homo sapiens chromosome 3 clone RP11-29M1, complete sequence
          Length = 143671

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cccagtattaacattttatg 58
             ||||||||||||||||||||
Sbjct: 32209 cccagtattaacattttatg 32228
to top
>gb|AF350959.1|AF350959 Mascagnia sepium tRNA-Leu (trnL) and tRNA-Phe (trnF) genes, partial
           sequence; chloroplast genes for chloroplast products
          Length = 970

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350958.1|AF350958 Rhynchophora phillipsonii tRNA-Leu (trnL) and tRNA-Phe (trnF)
           genes, partial sequence; chloroplast genes for
           chloroplast products
          Length = 953

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350957.1|AF350957 Malpighia emarginata tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 982

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350956.1|AF350956 Malpighia stevensii tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 983

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350955.1|AF350955 Triaspis hypericoides tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 974

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350954.1|AF350954 Caucanthus auriculatus tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 981

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF350953.1|AF350953 Aspidopterys elliptica tRNA-Leu (trnL) and tRNA-Phe (trnF) genes,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 tatctgaaatctgaatctga 231
           ||||||||||||||||||||
Sbjct: 182 tatctgaaatctgaatctga 163
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>gb|AF009204.1|AF009204 Homo sapiens PSD-95/SAP90-associated protein-2 mRNA, partial cds
          Length = 3412

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 618  gagctcctccgccttggaca 637
            ||||||||||||||||||||
Sbjct: 1834 gagctcctccgccttggaca 1815
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>gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-166j21, complete sequence
          Length = 123340

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    aaaacaaacatatactccat 322
              ||||||||||||||||||||
Sbjct: 114816 aaaacaaacatatactccat 114797
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>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence
          Length = 87338

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   cgagcagcggcagcgacagc 504
             ||||||||||||||||||||
Sbjct: 66298 cgagcagcggcagcgacagc 66279
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>ref|XM_571720.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  cagcggcagcgacagcgatg 508
            ||||||||||||||||||||
Sbjct: 1885 cagcggcagcgacagcgatg 1904
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>ref|XM_571719.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2068

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  cagcggcagcgacagcgatg 508
            ||||||||||||||||||||
Sbjct: 1918 cagcggcagcgacagcgatg 1937
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>gb|AC020893.6| Homo sapiens chromosome 5 clone CTC-250P20, complete sequence
          Length = 124235

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ttcccagtattaacatttta 56
             ||||||||||||||||||||
Sbjct: 42867 ttcccagtattaacatttta 42848
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>gb|AC010969.11| Homo sapiens BAC clone RP11-95D17 from 2, complete sequence
          Length = 190748

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    tcaaaagttacaaaaacatc 121
              ||||||||||||||||||||
Sbjct: 150551 tcaaaagttacaaaaacatc 150532
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>gb|AC117515.8| Homo sapiens 3 BAC RP11-797J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126982

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   atatctgaaatctgaatctg 230
             ||||||||||||||||||||
Sbjct: 38796 atatctgaaatctgaatctg 38815
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>emb|AL954845.21| Zebrafish DNA sequence from clone DKEY-30H3, complete sequence
          Length = 226343

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    actacaaaacaaacatatac 317
              ||||||||||||||||||||
Sbjct: 168084 actacaaaacaaacatatac 168103
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>gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191510

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cccagtattaacattttatg 58
             ||||||||||||||||||||
Sbjct: 77674 cccagtattaacattttatg 77693
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gccggggacactgtggctgc 536
               ||||||||||||||||||||
Sbjct: 4529728 gccggggacactgtggctgc 4529709
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>emb|AJ234696.1|HVU234696 Hordeum vulgare genomic DNA fragment; clone MWG0980.rev
          Length = 464

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 654 gacggtgctcagcaccttgc 673
           ||||||||||||||||||||
Sbjct: 462 gacggtgctcagcaccttgc 443
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>dbj|AK026046.1| Homo sapiens cDNA: FLJ22393 fis, clone HRC07880
          Length = 1648

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 tcctcggccttggagagcag 584
           ||||||||||||||||||||
Sbjct: 143 tcctcggccttggagagcag 162
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gccggggacactgtggctgc 536
               ||||||||||||||||||||
Sbjct: 4736645 gccggggacactgtggctgc 4736626
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 479     aggcgacgagcagcggcagcgaca 502
               ||||| ||||||||||||||||||
Sbjct: 4554185 aggcggcgagcagcggcagcgaca 4554162
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>gb|U87679.1|HGU87679 Hepatitis G virus isolate E3 envelope protein 2 (E2) gene, partial
           cds
          Length = 400

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 gacactgtggctgcgctctc 542
           ||||||||||||||||||||
Sbjct: 361 gacactgtggctgcgctctc 380
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>dbj|AB209559.1| Homo sapiens mRNA for SPRY domain-containing SOCS box protein SSB-1
           variant protein
          Length = 1231

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 tcctcggccttggagagcag 584
           ||||||||||||||||||||
Sbjct: 102 tcctcggccttggagagcag 121
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>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete
             sequence
          Length = 179035

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   atctgaaatctgaatctgat 232
             ||||||||||||||||||||
Sbjct: 80767 atctgaaatctgaatctgat 80748
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>dbj|AB000275.1| Homo sapiens mRNA for DAP-2, partial cds
          Length = 1740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 618 gagctcctccgccttggaca 637
           ||||||||||||||||||||
Sbjct: 576 gagctcctccgccttggaca 557
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>emb|AL805971.6| Mouse DNA sequence from clone RP23-143H1 on chromosome X, complete
             sequence
          Length = 107283

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   agtgggtgaaaatcaaatgg 201
             ||||||||||||||||||||
Sbjct: 83214 agtgggtgaaaatcaaatgg 83233


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,656,764
Number of Sequences: 3902068
Number of extensions: 5656764
Number of successful extensions: 127441
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126601
Number of HSP's gapped (non-prelim): 839
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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