>emb|X82832.1|HVUDEC H.vulgare mRNA for uroporphyrinogen decarboxylase
          Length = 1208

 Score =  264 bits (133), Expect = 1e-67
 Identities = 172/186 (92%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                        
Query: 48   acacctcaattagtatatgcacatatatgcttagagtcttacaatgaaatggaaactgaa 107
            ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1197 acacctcaattagtatatgca-atatatgcttagagtattacaatgaaatggaaactgaa 1139

                                                                        
Query: 108  atgcagaacacataagcanncacaaaaagatgtgttngnnaggtaccctatgctagacat 167
            ||||||||||||||||||  |||||||||||||||| |  ||||||||||||||||||||
Sbjct: 1138 atgcagaacacataagcaatcacaaaaagatgtgttcgtcaggtaccctatgctagacat 1079

                                                                        
Query: 168  gtggcttcctgcatctatcctcaagcagnggcatntncaacttntgncggctgggagaaa 227
            | |||||||||||||||||||||||||| ||||| | |||||| || |||||||||||||
Sbjct: 1078 g-ggcttcctgcatctatcctcaagcagtggcatctacaacttctgccggctgggagaaa 1020

                  
Query: 228  ggnaca 233
            || |||
Sbjct: 1019 ggaaca 1014

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 169      tggcttcctgcatctatcctcaagcag 195
                |||||||||||||||||||||||||||
Sbjct: 12506892 tggcttcctgcatctatcctcaagcag 12506866



 Score = 46.1 bits (23), Expect = 0.051
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 169      tggcttcctgcatctatcctcaagcag 195
                ||||||||| |||||||||||||||||
Sbjct: 12617741 tggcttccttcatctatcctcaagcag 12617767



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       ggcactttcttacacctcaa 56
                ||||||||||||||||||||
Sbjct: 12617625 ggcactttcttacacctcaa 12617644

>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 169   tggcttcctgcatctatcctcaagcag 195
             |||||||||||||||||||||||||||
Sbjct: 81049 tggcttcctgcatctatcctcaagcag 81075

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 169      tggcttcctgcatctatcctcaagcag 195
                |||||||||||||||||||||||||||
Sbjct: 12503655 tggcttcctgcatctatcctcaagcag 12503629



 Score = 46.1 bits (23), Expect = 0.051
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 169      tggcttcctgcatctatcctcaagcag 195
                ||||||||| |||||||||||||||||
Sbjct: 12614504 tggcttccttcatctatcctcaagcag 12614530



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       ggcactttcttacacctcaa 56
                ||||||||||||||||||||
Sbjct: 12614388 ggcactttcttacacctcaa 12614407

>dbj|AK070859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H03, full
            insert sequence
          Length = 1596

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 169  tggcttcctgcatctatcctcaagcag 195
            |||||||||||||||||||||||||||
Sbjct: 1345 tggcttcctgcatctatcctcaagcag 1319

>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 169   tggcttcctgcatctatcctcaagcag 195
             ||||||||| |||||||||||||||||
Sbjct: 59248 tggcttccttcatctatcctcaagcag 59222



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ggcactttcttacacctcaa 56
             ||||||||||||||||||||
Sbjct: 59364 ggcactttcttacacctcaa 59345

>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete
              sequence
          Length = 201304

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 90     aatgaaatggaaactgaaatgc 111
              ||||||||||||||||||||||
Sbjct: 114638 aatgaaatggaaactgaaatgc 114617

>gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete sequence
          Length = 130801

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    aatgaaatggaaactgaaatg 110
             |||||||||||||||||||||
Sbjct: 43248 aatgaaatggaaactgaaatg 43268

>gb|AC117435.4| Homo sapiens 3 BAC RP11-71I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 56270

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    acaatgaaatggaaactgaaa 108
             |||||||||||||||||||||
Sbjct: 20444 acaatgaaatggaaactgaaa 20424

>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence
          Length = 208709

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     ttagtatatgcacatatatg 76
              ||||||||||||||||||||
Sbjct: 123405 ttagtatatgcacatatatg 123424

>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3
             Contains the SPRL2A gene for small proline rich-like
             (epidermal differentiation complex) 2A, the LEP1 gene for
             late envelope protein 1, a novel gene, the MCSP gene for
             mitochondrial capsule selenoprotein and the IVL gene for
             involucrin, complete sequence
          Length = 116067

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    attagtatatgcacatatat 75
             ||||||||||||||||||||
Sbjct: 39705 attagtatatgcacatatat 39686

>gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome 6, complete sequence
          Length = 197408

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 93     gaaatggaaactgaaatgcagaacacat 120
              ||||| ||||||||||| ||||||||||
Sbjct: 176171 gaaatagaaactgaaatacagaacacat 176144

>emb|BX546482.15| Zebrafish DNA sequence from clone DKEY-226B20 in linkage group 13,
             complete sequence
          Length = 206949

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    cctcaattagtatatgcacatata 74
             |||||||||| |||||||||||||
Sbjct: 26322 cctcaattagaatatgcacatata 26345

>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1,
             complete sequence
          Length = 210511

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atgaaatggaaactgaaatg 110
             ||||||||||||||||||||
Sbjct: 26117 atgaaatggaaactgaaatg 26098

>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown
             Norway (BN/ssNHsd), RT1n haplotype
          Length = 94535

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tatatgcacatatatgctta 80
             ||||||||||||||||||||
Sbjct: 56785 tatatgcacatatatgctta 56804

>emb|AL935136.4| Zebrafish DNA sequence from clone CH211-180B2, complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    cctcaattagtatatgcacatata 74
             |||||||||| |||||||||||||
Sbjct: 44363 cctcaattagaatatgcacatata 44386


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,580,699
Number of Sequences: 3902068
Number of extensions: 1580699
Number of successful extensions: 34841
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34783
Number of HSP's gapped (non-prelim): 56
length of query: 246
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 224
effective length of database: 17,147,199,772
effective search space: 3840972748928
effective search space used: 3840972748928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)