ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5n09 |
|---|---|
| Clone Library Name | barley_pub |
>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)| (Preprospasmolysin) Length = 400 Score = 37.0 bits (84), Expect = 0.039 Identities = 22/83 (26%), Positives = 32/83 (38%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTA 372 P ++VP+T T P T T T P P+T +T T + + PT T Sbjct: 194 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTASTTAETTTVPTTPETTTE 253 Query: 371 APVSLVYEKPEPALPEAVEYSFE 303 + + P LP E + E Sbjct: 254 PTTTPTTDTTPPTLPPTPETTTE 276 Score = 33.9 bits (76), Expect = 0.33 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTA 372 P ++VP+T T P T T T P P+T +T TV + PT TA Sbjct: 176 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTA 235 Query: 371 A 369 + Sbjct: 236 S 236 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 P ++VP+T T P T T T P P+T +T TV + PT T Sbjct: 167 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 225 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 P ++VP+T T P T T T P P+T +T TV + PT T Sbjct: 158 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 216 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 P ++VP+T T P T T T P P+T +T TV + PT T Sbjct: 149 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 207 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 P ++VP+T T P T T T P P+T +T TV + PT T Sbjct: 140 PETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 198 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/71 (29%), Positives = 27/71 (38%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTA 372 P ++VP+T T P T T T P P+T PT + TP T Sbjct: 185 PETTTVPTTPETTTVPTTPETTTVPTTPET------TTVPTTPETTTVPTTPETTTASTT 238 Query: 371 APVSLVYEKPE 339 A + V PE Sbjct: 239 AETTTVPTTPE 249 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/56 (30%), Positives = 23/56 (41%) Frame = -3 Query: 542 SSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 ++VP+T T P T T T P P+T +T TV + PT T Sbjct: 134 TTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTT 189
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 34.3 bits (77), Expect = 0.25 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = -3 Query: 548 PASSVPSTXGTLP*PMTRRTKTEPPNPKTYG-----AALNLKTPTVAAPMQLAMTPTVAN 384 P + P++ P P T +T PP P T G AA +P A+P A P+ AN Sbjct: 453 PTTPPPTSTHATPRPTTPGPQTTPPGPATPGPVGASAAPTADSPLTASPPATAPGPSAAN 512 Query: 383 KVTAA 369 AA Sbjct: 513 VSVAA 517
>ATPX_SPIOL (P31853) ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14)| (Subunit II) Length = 222 Score = 32.7 bits (73), Expect = 0.73 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = -3 Query: 536 VPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTAAPVSL 357 V S+ TLP T +P P L L P + L ++ + +TA P++L Sbjct: 6 VASSSKTLPTTTTTTITPKPKFPLLKTPLLKLSPPQLPPLKHLNLSVLKSAAITATPLTL 65 Query: 356 VYEKPEPALPEAVE 315 + P P+L E +E Sbjct: 66 SFLLPYPSLAEEIE 79
>POL_HTLV2 (P03363) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 982 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -1 Query: 382 RSQPPLFPLSTRNRSQHCRRRSSIPSKKSGWPSICPEKLFSCQDM 248 R QPP P++ + S+H R R+ P+ SG S PE+L + D+ Sbjct: 86 RPQPP--PIAANSHSKHHRPRTPSPTSPSGPISFKPERLQALNDL 128
>GRB7_HUMAN (Q14451) Growth factor receptor-bound protein 7 (GRB7 adapter| protein) (Epidermal growth factor receptor GRB-7) (B47) Length = 532 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -1 Query: 382 RSQPPLFPLSTRNRSQHCRRRSSIPSKKSGWPSICPEKLFSCQDMSRSPLCG 227 RSQP L P + R + RR +S+PS + +P + C S+SP+ G Sbjct: 41 RSQPLLIPTTGRKLREEERRATSLPSIPNPFPEL-------CSPPSQSPILG 85
>BCSC_XANAC (P58938) Cellulose synthase operon protein C precursor| Length = 1508 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 458 GAALN-LKTPTVAAPMQLAMTPTVANKVTAAPVSLVYEKPEPALPEAVEYS 309 G+A N + T VA LAM P A TAAPV+ + ALP+ V S Sbjct: 875 GSAYNDVATAPVAYIAPLAMQPGAARVATAAPVNAAADLSSDALPQPVRAS 925
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/97 (22%), Positives = 43/97 (44%) Frame = +1 Query: 76 AEVRASFAEYGNNQIWQRNNHNSAGRLSSTNIGKQLVSHK*LQSGFQLSPTHRVEILTCL 255 ++V FA + ++ WQ H+S +T + ++ S + + +E L C Sbjct: 1249 SQVNGFFASHLGDRGWQEPQHSSPSPSVTTKVNEKTFSDSNRSKAKRRGISDLIEHLDCA 1308 Query: 256 DS*TTSLDK*TASRFSSKEYSTASGNAGSGFS*TRET 366 DS DK ++ SS+++ T+ S S + +T Sbjct: 1309 DS-----DKDDSTYTSSQDHQTSKQEPSSSLSTSNKT 1340
>PE55_LUCCU (Q95UE8) Peritrophin-55 precursor| Length = 220 Score = 31.2 bits (69), Expect = 2.1 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Frame = -3 Query: 551 PPASSVPSTXGT-LP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 PP++ VPST T P P T +T T+PP T +N PT P A + + Sbjct: 133 PPSTPVPSTIVTNKPDPTTPKT-TKPPKVTT---TVNPSPPTGTGPATNAPSSDIPLPPI 188 Query: 374 AAPVSLVYEKPEPALP 327 A+ V+ Y P P +P Sbjct: 189 ASTVNTKYPTP-PGMP 203
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 PP + +P+ T T PP P T A T T AAP TPT +VT Sbjct: 160 PPTTEIPTATET---QTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGPRQVT 215
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = -3 Query: 551 PPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVT 375 PP + +P+ T T PP P T A T T AAP TPT +VT Sbjct: 160 PPTTEIPTATET---QTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGPRQVT 215
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 331 CRRRSSIPSKKS-GWPSICPEKLFSCQDMSRSPLCG 227 CR+R I + S P +C FSCQ + RSP+CG Sbjct: 582 CRQRGGIWDEDSEDGPCVCD---FSCQSVPRSPVCG 614
>PANK2_ARATH (Q8L5Y9) Pantothenate kinase 2 (EC 2.7.1.33) (Pantothenic acid| kinase 2) Length = 870 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 457 PYVL-GLGGSVFVLRVIGHGSVPXVEGTLLAGGMIW 561 PY+L +G V +++V G G V GT + GG W Sbjct: 209 PYLLVNVGSGVSIIKVDGEGKFERVSGTNVGGGTYW 244
>ADP1_MYCGA (Q49379) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)| Length = 1122 Score = 30.4 bits (67), Expect = 3.6 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -2 Query: 546 GKQCPLHSWHAPVTNDTEDENRTPQPQDIWSSTESQDADRGGSDAVGDDAHRG*QG 379 G P S V + D+N+ P+P+ + S+ES ++ GG + + QG Sbjct: 230 GTMTPTASTSETVIDYNSDQNKIPKPKTLLDSSESSESINGGRTYANINTQKNLQG 285
>CLAP2_BRARE (Q6NYW6) CLIP-associating protein 2 (Cytoplasmic linker-associated| protein 2) Length = 1288 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Frame = -2 Query: 525 SWHAPVTNDTEDENRTPQPQDIWSSTESQDAD------RGGSDAVGDDAHRG*QGHSRPC 364 SW +P+T+ T TP P TE+ +++ RG S A+ + + R + + P Sbjct: 912 SWSSPLTSPTNTSQNTPSPSAFDYDTENMNSEEIYSSLRGVSQAIQNFSVRSQEDMTEPP 971 Query: 363 FPCLRETGASIAGGGRVFLRRKAA 292 + G GR L K + Sbjct: 972 RKREGDGGEETVDSGRTALDNKTS 995
>ATKA_GEOKA (Q5KUV3) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 560 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 18/80 (22%) Frame = +1 Query: 310 EYSTASGNAGSGFS*TRET--------------GAAVTLLATVGVIANCIG----AATVG 435 EY++++ N GSGF ++ G V+++A + V + +G T+G Sbjct: 460 EYTSSAANNGSGFEGLKDNTAFWNISTGVVMLLGRYVSIIAMLAVAGSLVGKQPVPETIG 519 Query: 436 VLRFSAAPYVLGLGGSVFVL 495 R A + + L G+VF++ Sbjct: 520 TFRTDTATFGVILFGTVFII 539
>TOP2_PICGU (Q01879) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| (Fragment) Length = 389 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -3 Query: 497 RRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTAAPVSLVYEKPEPALPEAV 318 + TK+EP KT + TPT+ A A P V + P L + EP++ + V Sbjct: 208 KSTKSEPAQKKTKSSTPKASTPTIKAEATPAQ-PVVKEETNKQPDFLSFFSKEPSVAKTV 266
>MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [Includes: Mannan| endo-1,4-beta-mannosidase A (EC 3.2.1.78) (Beta-mannanase) (Endo-1,4-mannanase); Endo-1,4-beta-glucanase (EC 3.2.1.4) (Cellulase)] Length = 1331 Score = 30.0 bits (66), Expect = 4.8 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Frame = -3 Query: 521 GTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANKVTAAPVSLVYEKP 342 GT P P + T T P P TPTV + TPTV T P + P Sbjct: 720 GTTPSPTSTPTVTVTPTPTP--TPTPTPTPTVTPTPTVTPTPTVTATPTPTPTPIPTVTP 777 Query: 341 EPAL---PEAVE 315 P + P VE Sbjct: 778 LPTISPSPSVVE 789
>MDCG_KLEPN (P71426) Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)| (Holo-ACP synthase) Length = 205 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +2 Query: 404 SPTASEPPRSAS*DSVLLHMSWGWGVRFSSSVSLVT 511 SP S+PP + L WGWGV S+ +L T Sbjct: 89 SPFVSQPPVQGAIALTLHRWPWGWGVTGSTGYALAT 124
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 30.0 bits (66), Expect = 4.8 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 14/97 (14%) Frame = -3 Query: 545 ASSVPSTXGTLP*PMTRRTKTEPPNPKTYGA------------ALNLKTPTVAAPM--QL 408 AS VPS +L T T T+PP+P + +LN TP P+ +L Sbjct: 464 ASYVPSP--SLSATATTTTTTDPPSPPVLSSSLQRKLLRKRKLSLNSSTPMEDLPLRERL 521 Query: 407 AMTPTVANKVTAAPVSLVYEKPEPALPEAVEYSFEEK 297 PT AA ++ E P+PA + Y+ K Sbjct: 522 RANPTDKKPRKAALLTNELEGPDPAAKSSSYYNLRSK 558
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 30.0 bits (66), Expect = 4.8 Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 10/84 (11%) Frame = -3 Query: 548 PASSVPSTXGTLP*PMTRRTKTEPPNPKT----------YGAALNLKTPTVAAPMQLAMT 399 PA+ P+T P P+ P P T A P VAAP T Sbjct: 7 PANVPPATAAAAPAPVVTAAPASAPTPSTPAPTPAATPAASPAPVSSDPAVAAPAAPGQT 66 Query: 398 PTVANKVTAAPVSLVYEKPEPALP 327 P A P +P PALP Sbjct: 67 PASAPAPAQTPAP---SQPGPALP 87
>VMSA_WHV8 (P17400) Major surface antigen precursor| Length = 431 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 532 PPLXARSRDQ*HGGRKPNPPTPRHMEQH 449 PP +RDQ GRKP PPTP + H Sbjct: 121 PPQTPTNRDQ---GRKPTPPTPPLRDTH 145
>VMSA_WHV7 (P12909) Major surface antigen precursor| Length = 431 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 532 PPLXARSRDQ*HGGRKPNPPTPRHMEQH 449 PP +RDQ GRKP PPTP + H Sbjct: 121 PPQTPTNRDQ---GRKPTPPTPPLRDTH 145
>VMSA_WHV59 (P12910) Major surface antigen precursor| Length = 431 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 532 PPLXARSRDQ*HGGRKPNPPTPRHMEQH 449 PP +RDQ GRKP PPTP + H Sbjct: 121 PPQTPTNRDQ---GRKPTPPTPPLRDTH 145
>VMSA_WHV2 (P06432) Major surface antigen precursor| Length = 431 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 532 PPLXARSRDQ*HGGRKPNPPTPRHMEQH 449 PP +RDQ GRKP PPTP + H Sbjct: 121 PPQTPTNRDQ---GRKPTPPTPPLRDTH 145
>VMSA_WHV1 (P03143) Major surface antigen precursor| Length = 426 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 532 PPLXARSRDQ*HGGRKPNPPTPRHMEQH 449 PP +RDQ GRKP PPTP + H Sbjct: 116 PPQTPTNRDQ---GRKPTPPTPPLRDTH 140
>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion| defective protein 3) Length = 1409 Score = 29.6 bits (65), Expect = 6.2 Identities = 24/78 (30%), Positives = 36/78 (46%) Frame = -3 Query: 560 QIMPPASSVPSTXGTLP*PMTRRTKTEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVANK 381 +++ P+SS PST T P + E PK + ++L+TPT P+ +TPT N Sbjct: 897 EVITPSSSAPSTM-TTPSEHSNDILKES-RPKLPASTIDLRTPT--KPLGQNVTPTSTNN 952 Query: 380 VTAAPVSLVYEKPEPALP 327 A + P P P Sbjct: 953 HEIAQSTRSPALPPPVPP 970
>ADP2_MYCGA (Q9REM8) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)| (Adherence protein A) Length = 1122 Score = 29.6 bits (65), Expect = 6.2 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 546 GKQCPLHSWHAPVTNDTEDENRTPQPQDIWSSTESQDADRGGSDAVGDDAHRG*QG 379 G P S V + D+N+ P+P+ + S+ES ++ GG + QG Sbjct: 230 GTMTPTASTSETVIDYNSDQNKIPKPKTLLDSSESSESINGGRTYANINTQNNLQG 285
>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 3) (ATP-energized glutathione S-conjugate pump 3) Length = 1514 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +3 Query: 246 DMS*QLNNFSGQIDGQPLFFEGILDRLRQCWLRFLVDKGNRGGCDL 383 D S +LN +G + P GIL L W+ L+D GN+ DL Sbjct: 229 DDSVELNKTNGSGEATPYSRAGILSLLTFSWMSPLIDIGNKKTLDL 274
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 29.6 bits (65), Expect = 6.2 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Frame = -3 Query: 551 PPASSVPS---TXGTLP*PMTRRTK--TEPPNPKTYGAALNLKTPTVAAPMQLAMTPTVA 387 PP ++ PS T T P P T + T P+P T T T ++P+ TP+ Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718 Query: 386 NKVTAAPVSLVYEKP 342 + P ++ P Sbjct: 1719 TTPSPPPTTMTTPSP 1733
>AROB_COLP3 (Q489N3) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 354 Score = 29.6 bits (65), Expect = 6.2 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 Query: 50 PNGSTERKLLKCELPLLSMETIKYGRETIITALG 151 P+G E+ L E+ + + T+++GR+T + ALG Sbjct: 68 PDGEAEKNLANFEVIISHLLTLEHGRDTTLIALG 101
>TIMD4_HUMAN (Q96H15) T-cell immunoglobulin and mucin domain-containing protein| 4 precursor (TIMD-4) (T-cell membrane protein 4) (TIM-4) Length = 378 Score = 29.6 bits (65), Expect = 6.2 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -2 Query: 561 PDHAAGKQCPLHSWHAPVTNDTEDENRTPQPQDIWSSTESQDAD 430 P+ A G P S P+ E+ T P D WSS ES AD Sbjct: 206 PEEATGLLTPEPSKEGPILTA---ESETVLPSDSWSSAESTSAD 246
>PHDK_NOCSK (O24723) Probable 1-hydroxy-2-naphthoate transporter| Length = 473 Score = 29.6 bits (65), Expect = 6.2 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 21/83 (25%) Frame = +1 Query: 370 AAVTLLATVGVIANCIGA---------------ATVGVLRFSAAPYVLGLGGSVF---VL 495 +AVTL+ ++GV+A IGA VG + F A LGL G + L Sbjct: 61 SAVTLVVSLGVVAMAIGALVSGPVADRWGRKGVTVVGFVLFCLATAGLGLTGDIHSFAAL 120 Query: 496 RVI---GHGSVPXVEGTLLAGGM 555 R+I G G+V V T++A M Sbjct: 121 RIISCFGLGAVMPVALTIVADWM 143
>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) Length = 325 Score = 29.3 bits (64), Expect = 8.1 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 308 RNTRPPPAMLAPVSRRQGKQGRL*PC*PRWASSPTASEPP 427 R T PPPA LA P P W+ SP++S PP Sbjct: 192 RRTSPPPASLAG------------PSVPSWSFSPSSSPPP 219
>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB) Length = 853 Score = 29.3 bits (64), Expect = 8.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -2 Query: 510 VTNDTEDENRTPQPQDIWSSTESQDADRGGSDAVGDDAHRG 388 +T+DTED + TPQ + +QD+ +GG ++ +A G Sbjct: 170 LTDDTEDTHGTPQSSSTPYARLAQDSQQGGMESPQVEADSG 210
>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2287 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -1 Query: 214 ENLTAVTCERLAVCLC-WSTTVAQRCYDCFSAIFDCFHTQQRKLALQQLPFSTAIWLAN* 38 E +TA+ + + L WST + +C AIFD ++KL L+ PF +L N Sbjct: 872 EQITAIINDLFCLILQKWSTFSSSCKLEC-QAIFDTLLKDRQKLVLEGRPFILLAFLNNP 930 Query: 37 DMYRFLSRH 11 + ++ L RH Sbjct: 931 E-FQVLERH 938 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,948,170 Number of Sequences: 219361 Number of extensions: 1952123 Number of successful extensions: 6062 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6022 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
