Clone Name	rbags5n08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)	213	4e-55
2	RS9_RAT (P29314) 40S ribosomal protein S9	211	1e-54
3	RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9	211	1e-54
4	RS9_HUMAN (P46781) 40S ribosomal protein S9	211	1e-54
5	RS9_DROME (P55935) 40S ribosomal protein S9	208	1e-53
6	RS9B_SCHPO (O59675) 40S ribosomal protein S9-B	196	4e-50
7	RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A	196	6e-50
8	RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP2...	195	8e-50
9	RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP2...	194	2e-49
10	RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal prote...	192	9e-49
11	RS9_CAEEL (Q20228) 40S ribosomal protein S9	191	1e-48
12	RS9_TRYBB (P17959) Probable 40S ribosomal protein S9	181	2e-45
13	RS9_NAEFO (Q25555) 40S ribosomal protein S9	167	3e-41
14	RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)	136	6e-32
15	RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)	131	2e-30
16	RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)	109	6e-24
17	RS4_SULTO (Q96YV8) 30S ribosomal protein S4P	98	2e-20
18	RS4_SULAC (P39467) 30S ribosomal protein S4P	95	2e-19
19	RS4_METJA (P54020) 30S ribosomal protein S4P	95	2e-19
20	RS4_METKA (Q8TVC0) 30S ribosomal protein S4P	94	3e-19
21	RS4_PYRHO (O59306) 30S ribosomal protein S4P	91	4e-18
22	RS4_THEVO (Q97B95) 30S ribosomal protein S4P	90	6e-18
23	RS4_PYRFU (P61993) 30S ribosomal protein S4P	90	6e-18
24	RS4_PYRAB (P61992) 30S ribosomal protein S4P	90	6e-18
25	RS4_AERPE (Q9YB58) 30S ribosomal protein S4P	89	8e-18
26	RS4_SULSO (P95987) 30S ribosomal protein S4P	89	1e-17
27	RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P	88	2e-17
28	RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P	88	2e-17
29	RS4_ARCFU (O28000) 30S ribosomal protein S4P	83	6e-16
30	RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P	83	8e-16
31	RS4_METBF (Q46GC8) 30S ribosomal protein S4P	82	1e-15
32	RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P	79	1e-14
33	RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P	79	1e-14
34	RS4_METTH (O26142) 30S ribosomal protein S4P	79	1e-14
35	RS4_METMP (Q6LXN0) 30S ribosomal protein S4P	77	3e-14
36	RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P	73	6e-13
37	RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P	73	8e-13
38	RS4_METAC (Q8TRR1) 30S ribosomal protein S4P	71	2e-12
39	RS4_METMA (Q8PV18) 30S ribosomal protein S4P	70	5e-12
40	RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)	70	5e-12
41	IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein...	65	2e-10
42	IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein...	64	3e-10
43	IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein...	60	7e-09
44	YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like	53	9e-07
45	RS4_PELCD (Q3A6M1) 30S ribosomal protein S4	49	1e-05
46	RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4	49	2e-05
47	IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein...	48	2e-05
48	RS4_FUSNN (Q8RE43) 30S ribosomal protein S4	48	3e-05
49	RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A	48	3e-05
50	RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4	47	5e-05
51	RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4	47	6e-05
52	RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4	47	6e-05
53	IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein...	47	6e-05
54	RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)	46	8e-05
55	RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4	46	8e-05
56	RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4	46	1e-04
57	RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4	46	1e-04
58	RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4	46	1e-04
59	RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4	46	1e-04
60	RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
61	RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
62	RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
63	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	45	1e-04
64	RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
65	RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4	45	2e-04
66	RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
67	RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B	45	2e-04
68	RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4	45	2e-04
69	RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4	45	2e-04
70	RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4	45	2e-04
71	RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4	45	2e-04
72	RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4	45	2e-04
73	RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4	45	2e-04
74	RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
75	RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
76	RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
77	RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
78	RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
79	RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
80	RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
81	RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
82	RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
83	RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
84	RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
85	RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
86	RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
87	RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
88	RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
89	RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)	45	2e-04
90	RT04_RECAM (O21263) Mitochondrial ribosomal protein S4	44	3e-04
91	RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
92	RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
93	RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4	44	3e-04
94	RS4_BACFR (Q64NN4) 30S ribosomal protein S4	44	3e-04
95	RS4_BACFN (Q5L8D5) 30S ribosomal protein S4	44	3e-04
96	RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4	44	3e-04
97	RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4	44	3e-04
98	RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4	44	3e-04
99	RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4	44	3e-04
100	RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4	44	3e-04
101	RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4	44	3e-04
102	RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4	44	3e-04
103	RS4_PORGI (Q7MTN9) 30S ribosomal protein S4	44	4e-04
104	RS4_BACTN (Q8A4A1) 30S ribosomal protein S4	44	4e-04
105	RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4	44	4e-04
106	RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4	44	4e-04
107	RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4	44	4e-04
108	RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4	44	4e-04
109	RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4	44	4e-04
110	RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4	44	4e-04
111	RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4	44	4e-04
112	RR4_OROMI (O78678) Plastid 30S ribosomal protein S4	44	4e-04
113	RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4	44	4e-04
114	RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4	44	4e-04
115	RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4	44	4e-04
116	RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4	44	5e-04
117	RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4	44	5e-04
118	RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)	44	5e-04
119	RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)	44	5e-04
120	RS4_STRCO (Q9KXP5) 30S ribosomal protein S4	43	7e-04
121	RS4_THEFY (Q47R66) 30S ribosomal protein S4	43	7e-04
122	RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4	43	7e-04
123	RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4	43	7e-04
124	RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
125	RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
126	RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
127	RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
128	RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
129	RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
130	RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
131	RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4	43	7e-04
132	RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
133	RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
134	RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
135	RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
136	RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
137	RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)	43	7e-04
138	RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4	43	0.001
139	RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4	43	0.001
140	RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4	43	0.001
141	RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4	43	0.001
142	RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic p...	43	0.001
143	RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4	43	0.001
144	RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4	43	0.001
145	RS4_LACAC (Q5FKX2) 30S ribosomal protein S4	43	0.001
146	RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4	43	0.001
147	RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4	43	0.001
148	RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
149	RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
150	RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
151	RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4	43	0.001
152	RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
153	RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
154	RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
155	RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
156	RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
157	RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
158	RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
159	RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
160	RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
161	RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
162	RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
163	RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
164	RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
165	RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
166	RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
167	RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
168	RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
169	RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
170	RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
171	RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
172	RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
173	RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
174	RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
175	RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)	43	0.001
176	RS4_DESPS (Q6AP44) 30S ribosomal protein S4	43	0.001
177	RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4	42	0.001
178	RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4	42	0.001
179	RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4	42	0.001
180	RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4	42	0.001
181	RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
182	RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4	42	0.001
183	RS4_STAS1 (Q49YF2) 30S ribosomal protein S4	42	0.001
184	RS4_STAAW (P66564) 30S ribosomal protein S4	42	0.001
185	RS4_STAAS (Q6G8K8) 30S ribosomal protein S4	42	0.001
186	RS4_STAAR (Q6GFY8) 30S ribosomal protein S4	42	0.001
187	RS4_STAAN (P66563) 30S ribosomal protein S4	42	0.001
188	RS4_STAAM (P66562) 30S ribosomal protein S4	42	0.001
189	RS4_STAAC (Q5HF54) 30S ribosomal protein S4	42	0.001
190	RS4_STAAB (Q2YTH0) 30S ribosomal protein S4	42	0.001
191	RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4	42	0.001
192	RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4	42	0.001
193	RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4	42	0.001
194	RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4	42	0.001
195	RS4_PELLD (Q3B6D7) 30S ribosomal protein S4	42	0.002
196	RS4_STRAW (Q827S7) 30S ribosomal protein S4	42	0.002
197	RS4_GEOKA (Q5KW49) 30S ribosomal protein S4	42	0.002
198	RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4	42	0.002
199	RS4_SYNY3 (P48939) 30S ribosomal protein S4	42	0.002
200	RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4	42	0.002
201	RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4	42	0.002
202	RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4	42	0.002
203	RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4	42	0.002
204	RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.002
205	RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4	42	0.002
206	RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.002
207	RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)	42	0.002
208	RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4	42	0.002
209	RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4	42	0.002
210	RS4_LEGPA (Q5X835) 30S ribosomal protein S4	42	0.002
211	RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.002
212	RS4_CORGL (Q8NSV4) 30S ribosomal protein S4	42	0.002
213	RS4_COREF (Q8FS34) 30S ribosomal protein S4	42	0.002
214	RS4_CORAM (Q3S664) 30S ribosomal protein S4	42	0.002
215	RS4_THET8 (P80373) 30S ribosomal protein S4	42	0.002
216	RS4_THET2 (P62664) 30S ribosomal protein S4	42	0.002
217	RS4_GEOSL (Q749B2) 30S ribosomal protein S4	42	0.002
218	RS4_GEOMG (Q39XY0) 30S ribosomal protein S4	42	0.002
219	RS4_LACJO (Q74K05) 30S ribosomal protein S4	42	0.002
220	RS4_NITWN (Q3ST14) 30S ribosomal protein S4	41	0.003
221	RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4	41	0.003
222	RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4	41	0.003
223	RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4	41	0.003
224	RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4	41	0.003
225	RS4_LISMF (Q71Z71) 30S ribosomal protein S4	41	0.003
226	RS4_LISIN (Q92BB2) 30S ribosomal protein S4	41	0.003
227	RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4	41	0.003
228	RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4	41	0.003
229	RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4	41	0.003
230	RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4	41	0.003
231	RS4_THETN (Q8R7Y1) 30S ribosomal protein S4	41	0.003
232	RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4	41	0.003
233	RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4	41	0.003
234	RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4	41	0.003
235	RS4_STAHJ (Q4L760) 30S ribosomal protein S4	41	0.003
236	RS4_STAES (Q8CS54) 30S ribosomal protein S4	41	0.003
237	RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4	41	0.003
238	RS4_IDILO (Q5QXV7) 30S ribosomal protein S4	41	0.003
239	RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4	41	0.003
240	RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4	41	0.003
241	RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4	41	0.003
242	RS4_TROWT (Q83GC9) 30S ribosomal protein S4	41	0.003
243	RS4_TROW8 (Q83HV1) 30S ribosomal protein S4	41	0.003
244	RS4_CORJK (Q4JTC1) 30S ribosomal protein S4	41	0.003
245	RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4	41	0.003
246	RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4	40	0.004
247	RS4_CORDI (Q6NJ64) 30S ribosomal protein S4	40	0.004
248	RS4_LACPL (Q88UX0) 30S ribosomal protein S4	40	0.004
249	RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4	40	0.004
250	RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4	40	0.004
251	RS4_AQUAE (O66484) 30S ribosomal protein S4	40	0.004
252	RR4_EQUSY (Q6H9K4) Chloroplast 30S ribosomal protein S4	40	0.004
253	RR4_EQUPT (Q6H9K7) Chloroplast 30S ribosomal protein S4	40	0.004
254	RR4_EQUPA (Q6H9K8) Chloroplast 30S ribosomal protein S4	40	0.004
255	RR4_EQUFL (Q6H9L3) Chloroplast 30S ribosomal protein S4	40	0.004
256	RR4_EQUAR (Q6H9L6) Chloroplast 30S ribosomal protein S4	40	0.004
257	RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4	40	0.006
258	RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4	40	0.006
259	RS4_CHLTE (P59129) 30S ribosomal protein S4	40	0.006
260	RS4_OCEIH (P59130) 30S ribosomal protein S4	40	0.006
261	RS4_BACHK (Q6HCM2) 30S ribosomal protein S4	40	0.006
262	RS4_BACCZ (Q633E0) 30S ribosomal protein S4	40	0.006
263	RS4_BACCR (Q817A4) 30S ribosomal protein S4	40	0.006
264	RS4_BACC1 (Q72Z76) 30S ribosomal protein S4	40	0.006
265	RS4_BACAN (Q81KT2) 30S ribosomal protein S4	40	0.006
266	RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)	40	0.006
267	RS4B_CLOAB (Q97J08) Putative 30S ribosomal protein S4 B	40	0.006
268	RR4_EQUBO (Q6H9L5) Chloroplast 30S ribosomal protein S4	40	0.006
269	RS4_THIDA (Q3SLM5) 30S ribosomal protein S4	40	0.006
270	RS4_MYCPU (Q98PK6) 30S ribosomal protein S4	40	0.008
271	RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)	40	0.008
272	RS4_BACLD (Q65G42) 30S ribosomal protein S4	40	0.008
273	RS4_NEIMB (P66561) 30S ribosomal protein S4	40	0.008
274	RS4_NEIMA (P66560) 30S ribosomal protein S4	40	0.008
275	RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4	40	0.008
276	RR4_ASTLO (P58134) Plastid 30S ribosomal protein S4	40	0.008
277	RS4_SYNEL (P59134) 30S ribosomal protein S4	40	0.008
278	RR4_JAMAU (Q9M4B8) Chloroplast 30S ribosomal protein S4	40	0.008
279	RR4_PSEAK (Q3ZJ39) Chloroplast 30S ribosomal protein S4	40	0.008
280	RR4_CHAGL (Q8M9W2) Chloroplast 30S ribosomal protein S4	40	0.008
281	RS4_NOCFA (Q5Z1L0) 30S ribosomal protein S4	40	0.008
282	RS4_LACSS (Q38XD6) 30S ribosomal protein S4	40	0.008
283	RR4_CYAPA (P48133) Cyanelle 30S ribosomal protein S4	40	0.008
284	RS4_DESVH (Q72CF5) 30S ribosomal protein S4	40	0.008
285	RS4_RHOPA (Q6N9G0) 30S ribosomal protein S4 (RRP-S4)	40	0.008
286	RS4B_CLOPE (Q8XHW7) Putative 30S ribosomal protein S4 B	40	0.008
287	RR4_EUGGR (P27418) Chloroplast 30S ribosomal protein S4	39	0.010
288	RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4	39	0.010
289	RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4	39	0.010
290	RS4_MYCBO (P45811) 30S ribosomal protein S4	39	0.013
291	RS4_COLP3 (Q488Y9) 30S ribosomal protein S4	39	0.013
292	RR4_TAKLE (P59150) Chloroplast 30S ribosomal protein S4	39	0.013
293	RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4	39	0.013
294	RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4	39	0.013
295	RS4_MYCTU (O06325) 30S ribosomal protein S4	39	0.013
296	RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4	39	0.013
297	RS4_MYCLE (Q9X799) 30S ribosomal protein S4	39	0.017
298	RS4_BACSK (Q5WEB9) 30S ribosomal protein S4	39	0.017
299	RS4_ANAVT (Q3M534) 30S ribosomal protein S4	39	0.017
300	RS4_ANASP (Q8YTI0) 30S ribosomal protein S4	39	0.017
301	RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)	39	0.017
302	RS4_LEPIN (Q9XD10) 30S ribosomal protein S4	39	0.017
303	RS4_LEPIC (Q72NI7) 30S ribosomal protein S4	39	0.017
304	RR4_PROWI (O47032) Plastid 30S ribosomal protein S4	39	0.017
305	RS4_NITOC (Q3J8T7) 30S ribosomal protein S4	38	0.022
306	RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4	38	0.029
307	RS4_MANSM (Q65QX9) 30S ribosomal protein S4	38	0.029
308	RS4_PSEHT (Q3IJJ5) 30S ribosomal protein S4	37	0.038
309	RS4_THICR (Q31IV9) 30S ribosomal protein S4	37	0.050
310	RS4_SILPO (Q5LNM2) 30S ribosomal protein S4	37	0.050
311	RS4_PSEF5 (Q4K556) 30S ribosomal protein S4	37	0.050
312	RS4_PASMU (Q9CL53) 30S ribosomal protein S4	37	0.050
313	RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4	37	0.050
314	RS4_HAEIN (P44373) 30S ribosomal protein S4	37	0.050
315	RS4_PROAC (Q6A6R0) 30S ribosomal protein S4	37	0.050
316	RS4_MYCPA (Q73S44) 30S ribosomal protein S4	37	0.050
317	RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4	37	0.050
318	RS4_NITMU (Q2YAX3) 30S ribosomal protein S4	37	0.065
319	RS4_HELHP (Q7VGC0) 30S ribosomal protein S4	37	0.065
320	RS4_BIFLO (P59127) 30S ribosomal protein S4	37	0.065
321	RS4_STRT2 (Q5M255) 30S ribosomal protein S4	37	0.065
322	RS4_STRT1 (Q5LXK5) 30S ribosomal protein S4	37	0.065
323	RS4_DEHSC (Q3ZZP7) 30S ribosomal protein S4	37	0.065
324	RS4_DEHE1 (Q3Z954) 30S ribosomal protein S4	37	0.065
325	RS4_BRAJA (Q89ID3) 30S ribosomal protein S4	36	0.085
326	RS4_PSEPF (Q3K611) 30S ribosomal protein S4	36	0.11
327	RS4_COXBU (Q83EQ3) 30S ribosomal protein S4	36	0.11
328	RS4_CLOTE (Q890Q9) 30S ribosomal protein S4	36	0.11
329	RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4	36	0.11
330	RS4_WIGBR (Q8D1Y9) 30S ribosomal protein S4	36	0.11
331	RS4_STRMU (P59133) 30S ribosomal protein S4	36	0.11
332	RS4_LACLA (Q9CIS2) 30S ribosomal protein S4	36	0.11
333	RS4_DEIRA (Q9RSJ7) 30S ribosomal protein S4	35	0.14
334	RS4_CAUCR (Q9A5D9) 30S ribosomal protein S4	35	0.14
335	RS4_PSEAE (O52759) 30S ribosomal protein S4	35	0.14
336	RS4_MYCGA (Q7NAV0) 30S ribosomal protein S4	35	0.19
337	RS4_THEMA (Q9X1I3) 30S ribosomal protein S4	35	0.19
338	RS4_MYCHJ (Q4A9B0) 30S ribosomal protein S4	35	0.19
339	RS4_MYCH7 (Q4A7F0) 30S ribosomal protein S4	35	0.19
340	RS4_MYCH2 (Q5ZZW4) 30S ribosomal protein S4	35	0.19
341	RS4_AZOSE (Q5P308) 30S ribosomal protein S4	35	0.19
342	RS4_MESFL (Q6F0M9) 30S ribosomal protein S4	35	0.19
343	RS4_MYCS5 (Q4A5T4) 30S ribosomal protein S4	35	0.19
344	RS4_GLUOX (Q5FQ27) 30S ribosomal protein S4	35	0.25
345	RS4_DECAR (Q47J78) 30S ribosomal protein S4	35	0.25
346	RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4	35	0.25
347	RS4_VIBVU (Q8DE62) 30S ribosomal protein S4	35	0.25
348	RS4_SHEON (P59131) 30S ribosomal protein S4	35	0.25
349	RS4_PSEU2 (Q4ZMR7) 30S ribosomal protein S4	35	0.25
350	RS4_PSESM (Q889U7) 30S ribosomal protein S4	35	0.25
351	RS4_PSE14 (Q48D60) 30S ribosomal protein S4	35	0.25
352	RS4_HELPY (P56011) 30S ribosomal protein S4	35	0.25
353	RS4_HELPJ (Q9ZJT4) 30S ribosomal protein S4	35	0.25
354	RS4_DESDG (Q30Z67) 30S ribosomal protein S4	35	0.25
355	RS4_BORGA (Q660Q7) 30S ribosomal protein S4	35	0.25
356	RS4_BORBU (O51560) 30S ribosomal protein S4	34	0.32
357	RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4	34	0.32
358	RS4_GLOVI (Q7NFF4) 30S ribosomal protein S4	34	0.32
359	RS4_BUCAP (P41186) 30S ribosomal protein S4	34	0.32
360	YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Frag...	34	0.32
361	RS4_STRR6 (P66566) 30S ribosomal protein S4	34	0.32
362	RS4_STRPN (P66565) 30S ribosomal protein S4	34	0.32
363	RS4_STRPM (Q48QN5) 30S ribosomal protein S4	34	0.32
364	RS4_STRP8 (P66569) 30S ribosomal protein S4	34	0.32
365	RS4_STRP6 (Q5X9C7) 30S ribosomal protein S4	34	0.32
366	RS4_STRP3 (P66568) 30S ribosomal protein S4	34	0.32
367	RS4_STRP1 (P66567) 30S ribosomal protein S4	34	0.32
368	RS4_STRA5 (Q8DWS6) 30S ribosomal protein S4	34	0.32
369	RS4_STRA3 (Q8E2M6) 30S ribosomal protein S4	34	0.32
370	RS4_STRA1 (Q3JYG8) 30S ribosomal protein S4	34	0.32
371	RS4_VIBCH (Q9KP07) 30S ribosomal protein S4	34	0.42
372	RS4_XYLFA (Q9PE53) 30S ribosomal protein S4	34	0.42
373	RS4_VIBF1 (Q5E890) 30S ribosomal protein S4	33	0.55
374	RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4	33	0.55
375	RS4_PSEPK (Q88QL2) 30S ribosomal protein S4	33	0.55
376	RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4	33	0.72
377	RS4_PHOPR (Q6LV92) 30S ribosomal protein S4	33	0.94
378	RS4_RHOS4 (Q3J446) 30S ribosomal protein S4	32	1.2
379	RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4	32	1.2
380	RS4_TREPA (O83328) 30S ribosomal protein S4	32	1.6
381	BUB1B_HUMAN (O60566) Mitotic checkpoint serine/threonine-protein...	32	2.1
382	RS4_RHOBA (Q7UXM6) 30S ribosomal protein S4	31	3.6
383	RS4_BUCBP (P59491) 30S ribosomal protein S4	31	3.6
384	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	30	7.9

---

>RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)|
          Length = 190

 Score =  213 bits (542), Expect = 4e-55
 Identities = 109/150 (72%), Positives = 128/150 (85%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           VGEYGLR KRE+ RV   LS+IR AAR LLTLDEK+P+R+FEG AL+RR+ R G+L E +
Sbjct: 29  VGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEKDPKRLFEGNALIRRLVRVGVLDESR 88

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDYVLAL AE+FL RRLQTLV+K G+AKSIHHARVLIRQRHIRVG+QIVNVPSF+VR+
Sbjct: 89  MKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHIRVGKQIVNVPSFVVRL 148

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKKA 191
           +S+KHIDF+LTSPFGGG   RV+RK  K A
Sbjct: 149 DSQKHIDFALTSPFGGGRPGRVRRKKAKAA 178

---

>RS9_RAT (P29314) 40S ribosomal protein S9|
          Length = 193

 Score =  211 bits (538), Expect = 1e-54
 Identities = 105/149 (70%), Positives = 127/149 (85%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +GEYGLR KRE+ RV++ L++IR AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+
Sbjct: 31  IGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGK 90

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR+
Sbjct: 91  MKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRL 150

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKK 194
           +S+KHIDFSL SP+GGG   RVKRKN KK
Sbjct: 151 DSQKHIDFSLRSPYGGGRPGRVKRKNAKK 179

---

>RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9|
          Length = 193

 Score =  211 bits (538), Expect = 1e-54
 Identities = 105/149 (70%), Positives = 127/149 (85%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +GEYGLR KRE+ RV++ L++IR AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+
Sbjct: 31  IGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGK 90

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR+
Sbjct: 91  MKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRL 150

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKK 194
           +S+KHIDFSL SP+GGG   RVKRKN KK
Sbjct: 151 DSQKHIDFSLRSPYGGGRPGRVKRKNAKK 179

---

>RS9_HUMAN (P46781) 40S ribosomal protein S9|
          Length = 193

 Score =  211 bits (538), Expect = 1e-54
 Identities = 105/149 (70%), Positives = 127/149 (85%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +GEYGLR KRE+ RV++ L++IR AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+
Sbjct: 31  IGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGK 90

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR+
Sbjct: 91  MKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRL 150

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKK 194
           +S+KHIDFSL SP+GGG   RVKRKN KK
Sbjct: 151 DSQKHIDFSLRSPYGGGRPGRVKRKNAKK 179

---

>RS9_DROME (P55935) 40S ribosomal protein S9|
          Length = 195

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/149 (70%), Positives = 126/149 (84%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +GEYGLR KRE+ RV+YAL++IR AAR LLTLDEK+ +R+F+G ALLRR+ R G+L E +
Sbjct: 33  IGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDYVL L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHIRV +Q+VN+PSF+VR+
Sbjct: 93  MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRL 152

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKK 194
           +S+KHIDFSL SPFGGG   RVKRKN KK
Sbjct: 153 DSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

---

>RS9B_SCHPO (O59675) 40S ribosomal protein S9-B|
          Length = 191

 Score =  196 bits (499), Expect = 4e-50
 Identities = 99/144 (68%), Positives = 120/144 (83%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           GEYGLR K E+ RV   LS+IR AAR LLTLDEK+P+R+FEG A++RR+ R G+L E + 
Sbjct: 31  GEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDESRM 90

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           KLDYVLAL  E+FL RRLQT VFK G+AKSIHHARVLI QRHIRVG+QIVNVPSF+VR++
Sbjct: 91  KLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLD 150

Query: 277 SEKHIDFSLTSPFGGGPAXRVKRK 206
           ++KHIDF+L+SP+GGG   R KRK
Sbjct: 151 AQKHIDFALSSPYGGGRPGRCKRK 174

---

>RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A|
          Length = 190

 Score =  196 bits (497), Expect = 6e-50
 Identities = 99/144 (68%), Positives = 120/144 (83%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           GEYGLR K E+ RV   LS+IR AAR LLTLDEK+P+R+FEG A++RR+ R G+L E + 
Sbjct: 31  GEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRM 90

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           KLDYVLAL  E+FL RRLQT VFK G+AKSIHHARVLI QRHIRVG+QIVNVPSF+VR++
Sbjct: 91  KLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLD 150

Query: 277 SEKHIDFSLTSPFGGGPAXRVKRK 206
           ++KHIDF+L+SP+GGG   R KRK
Sbjct: 151 TQKHIDFALSSPYGGGRPGRCKRK 174

---

>RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28)|
          Length = 194

 Score =  195 bits (496), Expect = 8e-50
 Identities = 96/145 (66%), Positives = 120/145 (82%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           GE+GL+ KRE+ R+ + LS+IR AAR LLT DEK+P+R+FEG AL+RR+ R G+L+E + 
Sbjct: 31  GEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKK 90

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           KLDYVLAL  E+FL RRLQT V+K G+AKS+HHARVLI QRHI VG+QIVN+PSFMVR++
Sbjct: 91  KLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLD 150

Query: 277 SEKHIDFSLTSPFGGGPAXRVKRKN 203
           SEKHIDF+ TSPFGG    RV R+N
Sbjct: 151 SEKHIDFAPTSPFGGARPGRVARRN 175

---

>RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28)|
          Length = 196

 Score =  194 bits (493), Expect = 2e-49
 Identities = 95/145 (65%), Positives = 120/145 (82%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           GE+GL+ K+E+ R+ + LS+IR AAR LLT DEK+P+R+FEG AL+RR+ R G+L+E + 
Sbjct: 31  GEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKK 90

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           KLDYVLAL  E+FL RRLQT V+K G+AKS+HHARVLI QRHI VG+QIVN+PSFMVR++
Sbjct: 91  KLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLD 150

Query: 277 SEKHIDFSLTSPFGGGPAXRVKRKN 203
           SEKHIDF+ TSPFGG    RV R+N
Sbjct: 151 SEKHIDFAPTSPFGGARPGRVARRN 175

---

>RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal protein 1024)|
           (Vegetative-specific protein V12)
          Length = 185

 Score =  192 bits (487), Expect = 9e-49
 Identities = 95/151 (62%), Positives = 122/151 (80%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           VGE+GL+ K E+ RVQYAL++IR AAR LL LDEK+P+RIFEG+ALLRR+++ G++ E +
Sbjct: 28  VGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIFEGSALLRRLHKLGVMEESK 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           +KLDY+L L  ++F+ RRLQTLVFK G+AKSIHHARVLI+ RHIRVG+Q+VNVPSF+VRV
Sbjct: 88  NKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRV 147

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKKAS 188
           ES+KH+  + TSP  GG   R  RK  K  S
Sbjct: 148 ESQKHLGLASTSPLAGGRPGRRARKMAKNNS 178

---

>RS9_CAEEL (Q20228) 40S ribosomal protein S9|
          Length = 189

 Score =  191 bits (486), Expect = 1e-48
 Identities = 93/149 (62%), Positives = 123/149 (82%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +G +GL+ KRE+ RV+Y L+++R AAR LLTL++K+P+R+FEG ALLRR+ + G+L E +
Sbjct: 31  IGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETK 90

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KLDYVL L  E+FL RRLQT VFK G+AKSIHHAR+LI+Q HIRV RQ+V+VPSF+VR+
Sbjct: 91  MKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRL 150

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKK 194
           +S+KHIDFSL SP+GGG   RVKR+  +K
Sbjct: 151 DSQKHIDFSLQSPYGGGRPGRVKRRTLRK 179

---

>RS9_TRYBB (P17959) Probable 40S ribosomal protein S9|
          Length = 190

 Score =  181 bits (458), Expect = 2e-45
 Identities = 90/149 (60%), Positives = 113/149 (75%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           G+YGLRCKRE+ RV   LS++R  AR LLTL E +PRR+ EG+A++RR + YG L E +D
Sbjct: 31  GQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRCHGYGFLDEDKD 90

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           KLDYVL+LT  + L RRLQT+VFK G+AKS+HH+RVLI+QRHI V +QIV +PSF+VRV 
Sbjct: 91  KLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVS 150

Query: 277 SEKHIDFSLTSPFGGGPAXRVKRKNQKKA 191
           SE HI F+  SPFG G   RVKR  +  A
Sbjct: 151 SEHHIAFADASPFGNGRPGRVKRVKRNAA 179

---

>RS9_NAEFO (Q25555) 40S ribosomal protein S9|
          Length = 186

 Score =  167 bits (422), Expect = 3e-41
 Identities = 89/148 (60%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           G+YGL+ K+E+ R+QY L+R R  ARHLLTL E + +R FEGAALLRRM R GLL E + 
Sbjct: 34  GKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQ 93

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           +LDY+L+L  E+ L RRLQT+V K G++KSIHHAR LI QRHIRVG+Q VNVPSF+VRV+
Sbjct: 94  QLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVD 153

Query: 277 SEKHIDFS-LTSPFGGGPAXRVKRKNQK 197
           SEKHI+ S  ++   GG   R+ RK  K
Sbjct: 154 SEKHINMSPFSALVQGGKPGRMTRKKLK 181

---

>RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)|
          Length = 130

 Score =  136 bits (342), Expect = 6e-32
 Identities = 69/101 (68%), Positives = 83/101 (82%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +GEYGLR KRE+ RV++ L++IR AAR LLTLDEK+PRR+FEG ALLRR+ R G+L EG+
Sbjct: 30  IGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGK 89

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 338
            KLDY+L L  E+FL RRLQT VFK G+A SIHH RVLIRQ
Sbjct: 90  MKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLIRQ 130

---

>RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)|
          Length = 144

 Score =  131 bits (329), Expect = 2e-30
 Identities = 64/118 (54%), Positives = 88/118 (74%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           VG++GL+ K+E+ RV Y L  +R  A+ +L  D K+P+R+ EGAALLRR++  G+L   Q
Sbjct: 27  VGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQ 86

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
           +KL++VLAL  EN L RRLQTLV++ G  KSIHHARVLIR + I+ G+Q+  VPSF+V
Sbjct: 87  NKLEFVLALKEENLLERRLQTLVYRKGFGKSIHHARVLIRGKMIKAGKQVGGVPSFLV 144

---

>RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)|
          Length = 77

 Score =  109 bits (273), Expect = 6e-24
 Identities = 52/63 (82%), Positives = 58/63 (92%)
 Frame = -1

Query: 376 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSLTSPFGGGPAXRVKRKNQK 197
           AKS+HHARVLIRQRHIRVGRQ+VNVPSFMVR++S+KHIDFSL SPFGGG   RVKRKNQK
Sbjct: 1   AKSVHHARVLIRQRHIRVGRQVVNVPSFMVRLDSQKHIDFSLISPFGGGRPGRVKRKNQK 60

Query: 196 KAS 188
            A+
Sbjct: 61  AAA 63

---

>RS4_SULTO (Q96YV8) 30S ribosomal protein S4P|
          Length = 177

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 58/150 (38%), Positives = 86/150 (57%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +G+YGLR KREL   Q  + + R+ AR LL L      R      L++++ R G++ +  
Sbjct: 30  IGKYGLRNKRELWLAQTIIRKFRHQARSLLALPPAE--RSTREKQLIQKLYRMGIIEKDN 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
             LD +L L  EN+L RRLQT+V+K G+A++I+ AR LI   HI +G + V  P ++V  
Sbjct: 88  ATLDDILGLNEENYLERRLQTIVYKKGLARTIYQARQLIVHGHIAIGGRRVTSPGYIVMR 147

Query: 280 ESEKHIDFSLTSPFGGGPAXRVKRKNQKKA 191
             E  IDF  TSPF   P  +   +N ++A
Sbjct: 148 GEEDLIDFYPTSPFKQHPPTQQGEENVQQA 177

---

>RS4_SULAC (P39467) 30S ribosomal protein S4P|
          Length = 176

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLD--EKNPRRIFEGAALLRRMNRYGLLAE 467
           +G+YGLR K+E+   Q  +   R+ AR LL L   E+N R       L++++ R G+L +
Sbjct: 30  IGKYGLRNKKEIWIAQTMIRNFRHQARSLLALPPAERNIRE----KQLIQKLYRMGILEK 85

Query: 466 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
               LD +L+LT EN+L RRLQT+V+K G+A++I+ AR LI   HI +  + V  P ++V
Sbjct: 86  DNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLITHGHIAISGRKVTSPGYVV 145

Query: 286 RVESEKHIDFSLTSPFGGGP 227
               E  ID+  TSPF   P
Sbjct: 146 LRGEEDLIDYYPTSPFKQNP 165

---

>RS4_METJA (P54020) 30S ribosomal protein S4P|
          Length = 187

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 54/132 (40%), Positives = 78/132 (59%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +YGLR KRE+ + +  L + R  AR L++  ++  +   E   L   + +YG+L      
Sbjct: 33  KYGLRRKREVWKAETILRKYRRQARRLIS--DRTEQGAKEAVQLFNVLKKYGILKIENPT 90

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD VL+LT E+ L RRLQTLVF+ G+A++   AR LI   HI V  ++V  PS+MV VE 
Sbjct: 91  LDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEE 150

Query: 274 EKHIDFSLTSPF 239
           E  I ++  SPF
Sbjct: 151 EDKISYAKNSPF 162

---

>RS4_METKA (Q8TVC0) 30S ribosomal protein S4P|
          Length = 186

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +YGLR K+EL R Q  L R R  A+ L+   +   +R  E  AL R++   G+L +  ++
Sbjct: 32  KYGLRRKKELWRHQTQLKRWRERAKELMARTDPEAQR--EREALFRKLYDLGILDKKPEE 89

Query: 454 --LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
             LD +L LT E+ L RRLQT+V++ G+AK+   AR L+  RHI +G +IV VPS++V  
Sbjct: 90  ATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQLVVHRHIAIGDRIVTVPSYLVSR 149

Query: 280 ESEKHIDFSLTSP 242
           E E+ +D+S  SP
Sbjct: 150 EEEEEVDYSPYSP 162

---

>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +Y L+ K+EL + +  L   R  AR LL    K      E   LL R+ R GLL E    
Sbjct: 32  KYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IEREQLLSRLKRLGLLPEDA-V 88

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI V  QI+  PS++V  E 
Sbjct: 89  LDDVLSLTVEDILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEE 148

Query: 274 EKHIDFSLTSPF 239
           E  I ++ TSPF
Sbjct: 149 EDKITYARTSPF 160

---

>RS4_THEVO (Q97B95) 30S ribosomal protein S4P|
          Length = 200

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 13/162 (8%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHL---LTLDEKNPRRIFEGAALLRRMNRYGLLAEG 464
           +YGL+ KRE+ R +  LS IR+ AR+L   L   + N ++  E   +++R++RY +L++ 
Sbjct: 32  KYGLKNKREIWRSEAMLSSIRSQARYLRARLRASDANAQKQLE--RMIKRLSRYKILSD- 88

Query: 463 QDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           +  LD VL+LT EN L RRLQT+VFK  +A S   AR LI   HI V  + V VP  +V 
Sbjct: 89  KATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQARQLITHGHITVNGRRVTVPGMLVE 148

Query: 283 VESEKHIDFSLTSPFGG----------GPAXRVKRKNQKKAS 188
            + E  I +   SP              PA RVK + +K+A+
Sbjct: 149 AQYEDTIAYYENSPIANELHPIRQALLSPAERVKEEAEKEAA 190

---

>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +Y L+ K+EL + +  L   R  AR LL    K      E   LL R+ R GLL E    
Sbjct: 32  KYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IEREQLLARLKRLGLLPEDA-V 88

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI V  QI+  PS++V  E 
Sbjct: 89  LDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEE 148

Query: 274 EKHIDFSLTSPF 239
           E  I ++ TSPF
Sbjct: 149 EDTITYARTSPF 160

---

>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +Y L+ K+EL + +  L   R  AR LL    K      E   LL R+ R GLL E    
Sbjct: 32  KYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IEREQLLARLKRLGLLPEDA-V 88

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI V  QI+  PS++V  E 
Sbjct: 89  LDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLIVHGHIEVNGQIIRSPSYLVLKEE 148

Query: 274 EKHIDFSLTSPF 239
           E  I ++ TSPF
Sbjct: 149 EDTITYARTSPF 160

---

>RS4_AERPE (Q9YB58) 30S ribosomal protein S4P|
          Length = 171

 Score = 89.4 bits (220), Expect = 8e-18
 Identities = 53/134 (39%), Positives = 76/134 (56%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +G YGLR K+EL + +    R R+ AR LL L  +  R       L+  + R GL+    
Sbjct: 30  MGRYGLRNKKELWKAETLARRFRHRARSLLGLPPEVRREA--SRVLVESLYRMGLIDNPN 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
             +D VL + AE  L RRLQT+V+K G+AK+I+ AR L+   HI +  + V  P ++V  
Sbjct: 88  VDIDEVLGINAEKVLERRLQTIVYKKGLAKTIYQARQLVVHGHIAIAGRRVTSPGYLVSR 147

Query: 280 ESEKHIDFSLTSPF 239
           E EK ID++  SPF
Sbjct: 148 EEEKLIDYAPGSPF 161

---

>RS4_SULSO (P95987) 30S ribosomal protein S4P|
          Length = 181

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 52/138 (37%), Positives = 80/138 (57%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +G+YGLR KRE+   Q  + + R+ AR LL L      R      L+ ++ + GLL +  
Sbjct: 30  LGKYGLRNKREIWIAQSIIRKFRHQARSLLALPPAE--RAVREKQLVGKLLKMGLLKKET 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
             +D +L+LT ++ L RRLQT+V+K G++ +I+ AR LI   HI V  + V  P ++V V
Sbjct: 88  ATVDDILSLTEQDLLERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNV 147

Query: 280 ESEKHIDFSLTSPFGGGP 227
           + E  ID+ +TS F   P
Sbjct: 148 DEENLIDYYVTSSFKSRP 165

---

>RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P|
          Length = 199

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHL---LTLDEKNPRRIFEGAALLRRMNRYGLLA 470
           V +YGL+ K+E+ R +  LS IR+ AR L   L  ++ N ++  E   +++R+NRY LL+
Sbjct: 30  VVKYGLKNKKEIWRSEALLSSIRSQARDLRARLRTNDVNAQKQLE--RMIKRLNRYKLLS 87

Query: 469 EGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 290
           E    LD VL+LT EN L RRLQT+VF+  +A S+  AR LI   HI V  + V VP  +
Sbjct: 88  ENAT-LDDVLSLTVENILDRRLQTIVFRKNLAISVRQARQLITHGHISVAGRRVTVPGML 146

Query: 289 VRVESEKHIDFSLTSP 242
           V  + E  I +   SP
Sbjct: 147 VEAKDEDTIAYEENSP 162

---

>RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P|
          Length = 183

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLT-LDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           +YGL+ KREL R Q  L+  R  AR L   L   +P  I +   L+ +++R  LL E   
Sbjct: 32  KYGLKNKRELWRAQTILTNFRTQARTLQAKLRYNDPLAIKQFQLLIGKLSRLNLLGENAT 91

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
            LD VL+L  E+ L RRL+TLV+K  +A ++  AR  I   HI+V  ++V +PSFMV   
Sbjct: 92  -LDDVLSLNIEDILERRLETLVYKKNLALTMKQARQFITHGHIKVNDRVVTIPSFMVEKS 150

Query: 277 SEKHIDFSLTSPF 239
            E  I ++ TSPF
Sbjct: 151 MEDSITYNETSPF 163

---

>RS4_ARCFU (O28000) 30S ribosomal protein S4P|
          Length = 172

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTL----DEKNPRRIFEGAALLRRMNRYGLLAE 467
           +YGLR KREL R Q  L + R  AR LL       ++      +   +++++N+ G+L E
Sbjct: 32  KYGLRNKRELWRFQNILRKYRRVARDLLAEIGLPGKEGEIAKAKAQTVIKKLNKMGILPE 91

Query: 466 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
               LD +L L+ E+FL RRLQT+V++ G+A++I  AR  I   HI V  + V  PSF+V
Sbjct: 92  NAT-LDDILNLSVEDFLERRLQTMVYRQGLARTIKQARQFITHGHIAVDGRRVTSPSFIV 150

Query: 286 RVESEKHIDFSLTSP 242
             E E  I F   SP
Sbjct: 151 TKELESKISFYRNSP 165

---

>RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P|
          Length = 180

 Score = 82.8 bits (203), Expect = 8e-16
 Identities = 53/131 (40%), Positives = 73/131 (55%)
 Frame = -1

Query: 631 YGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 452
           Y L+ K+EL R +  L   R  AR LL    K      E   LL+R+ R GLL      L
Sbjct: 33  YALKNKKELWRHETQLKEFRRRARRLLAARGKQAE--IERQQLLQRLYRLGLLP-ADAVL 89

Query: 451 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
           D VL+LT E+ L RRLQT+V++ G+A+++  AR LI   HI V  Q++  P ++V  E E
Sbjct: 90  DDVLSLTVEDVLERRLQTIVYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLVLREEE 149

Query: 271 KHIDFSLTSPF 239
             I ++  SPF
Sbjct: 150 DTITYAKGSPF 160

---

>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEG------AALLRRMNRYG 479
           V  YGLR KRE+ +    L   R+ AR LL     +  R  EG        +L ++ RYG
Sbjct: 30  VKAYGLRNKREVWKAASTLRMYRSEARRLLASAANSQERGLEGHQKTQSEEILAKLIRYG 89

Query: 478 LLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVP 299
           ++    D +D +L+L  EN L RRLQT V + G+A+++  AR  I   HI +  +   VP
Sbjct: 90  IIKSDAD-IDDILSLKTENILERRLQTQVLRLGLARTVVQARQFITHGHIAINGRKATVP 148

Query: 298 SFMVRVESEKHIDFSLTSP 242
             +V  E E HI +  TSP
Sbjct: 149 GMLVSKEDEMHIGYYATSP 167

---

>RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P|
          Length = 180

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           EYGL+ KREL   +    + R  AR+L            E    L ++ + G+L+E  + 
Sbjct: 29  EYGLKNKRELWIAETIARKWRAYARYLNAKQAAGQDISEEKERFLTKLKKLGVLSENAE- 87

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD VL LT ++ L RRLQT++ + G+AK++  AR  I   HI V  ++V+ PS++V+ E 
Sbjct: 88  LDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFIVHGHIMVNGEVVDAPSYLVKKEE 147

Query: 274 EKHIDFSLTSPFGG--GPAXRVKRKNQ 200
           E  I+F   SP      PA ++++K +
Sbjct: 148 EDKIEFVPFSPLANPEHPARKLEQKEE 174

---

>RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P|
          Length = 159

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLL--TLDEKNPRRIFEGAALLRRMNRYGLLAE 467
           +GEYGLR K+EL   +  L  I   AR LL  T +E+ P  +        ++ + G + +
Sbjct: 32  MGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM----PFKEKLYKMGFIED 87

Query: 466 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
              +LD +L+L     L RRLQT+V++ G+AKSIHHAR LI   H+ V  + V  P F+V
Sbjct: 88  PNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLV 147

Query: 286 RVESEKHI 263
             E E  I
Sbjct: 148 PRELEDKI 155

---

>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 49/133 (36%), Positives = 79/133 (59%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           V +YGL+ K+E+ + +  + R R  AR+LL +  ++  +  E   LL  + R G+L EG 
Sbjct: 30  VAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASEHTGK--EREQLLGHLVRTGILNEGA 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            KL+ VL LT E+ L RRLQTLV K G+A+++  AR ++   HI +  + ++ P ++V+ 
Sbjct: 88  -KLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEARQMVIHGHIALDGRKIDAPGYIVKR 146

Query: 280 ESEKHIDFSLTSP 242
             E  I F  +SP
Sbjct: 147 GEEDKIGFYPSSP 159

---

>RS4_METMP (Q6LXN0) 30S ribosomal protein S4P|
          Length = 178

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 46/131 (35%), Positives = 72/131 (54%)
 Frame = -1

Query: 634 EYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDK 455
           +YGL  K+EL +++  L   R  AR L++  +   +   E   L   + RY +L E +  
Sbjct: 32  KYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAVQLFNVLKRYAILIEEEPT 89

Query: 454 LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVES 275
           LD+VL+L  E+ L RRLQT+VF+ G+AK+   AR  I   HI V  + V  P++++ V  
Sbjct: 90  LDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISVAE 149

Query: 274 EKHIDFSLTSP 242
              I++   SP
Sbjct: 150 NDAIEYVSNSP 160

---

>RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P|
          Length = 174

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFE-GAALLRRMNRYGLLAEG 464
           +  YGL  K EL R Q  L   R  AR L+   + +     E G+  L R+ R G+L + 
Sbjct: 29  LSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAGSEFLARLKRIGVL-DD 87

Query: 463 QDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           +D LD +L+L   + L RRLQT+ ++ G+  +   AR  I   H+ V    V+ PS+ V 
Sbjct: 88  EDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVD 147

Query: 283 VESEKHIDFSLTSP 242
           V  E  I+F  TSP
Sbjct: 148 VAEEGEIEFDETSP 161

---

>RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P|
          Length = 170

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 47/132 (35%), Positives = 68/132 (51%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +  YGL+ K EL R Q  L   R  AR LL            G   + R+ R G+L+E +
Sbjct: 30  LSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTGTVSGEEFVARLQRIGILSE-E 83

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           ++LD VL+L   + L RRLQT+V++ G+A ++  AR  +   H+ V    V  PS+ V V
Sbjct: 84  ERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRVTEPSYTVPV 143

Query: 280 ESEKHIDFSLTS 245
             E  + F  TS
Sbjct: 144 SEENTLAFDETS 155

---

>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEG------AALLRRMNRYG 479
           V  YGLR K+E+ +    L   R+ AR LL           EG        +L ++ RYG
Sbjct: 30  VKAYGLRNKKEVWKAASMLRMYRSEARKLLAHVASGQEGGLEGHYRTQSEEILSKLIRYG 89

Query: 478 LLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVP 299
           ++ +    +D +L+L  EN L RRLQT V + G+A+++  AR  I   HI +  +   +P
Sbjct: 90  II-KSDANIDDILSLKTENILERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATIP 148

Query: 298 SFMVRVESEKHIDFSLTSP 242
             +V  E E HI +   SP
Sbjct: 149 GMLVSKEDEMHIGYYGNSP 167

---

>RS4_METMA (Q8PV18) 30S ribosomal protein S4P|
          Length = 219

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTL-------DEKNPRRIFEGAALLRRMNRY 482
           V  YGLR K+E+ +    L   R+ AR LL          E       +   +L ++ RY
Sbjct: 30  VKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVASGGQEGELEGHYATQSEEILSKLIRY 89

Query: 481 GLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNV 302
           G++ +    +D +L+L  EN L RRLQT V + G+A+++  AR  I   HI +  +   +
Sbjct: 90  GII-KADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQFITHGHIAINGRKATI 148

Query: 301 PSFMVRVESEKHIDFSLTSP 242
           P  +V  E E HI +  +SP
Sbjct: 149 PGMLVSKEDEMHIGYYGSSP 168

---

>RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)|
          Length = 171

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 49/128 (38%), Positives = 64/128 (50%)
 Frame = -1

Query: 640 VGEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           +G YGL+ K EL R Q  L   R  AR LL    ++     E    L R+ RYG+L E Q
Sbjct: 29  IGRYGLKNKEELWRAQSELRGYRREARKLLGSAGEHET---ESEEFLARLKRYGILNE-Q 84

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           D+LD VL+L   + L RRLQT+V++ G A +   AR  I   HI +    V  P   V  
Sbjct: 85  DQLDDVLSLDVTDVLERRLQTVVYRKGYANTPEQARQFIVHGHIVLDDARVTRPGMTVET 144

Query: 280 ESEKHIDF 257
             E  + F
Sbjct: 145 AVESSVGF 152

---

>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 40/123 (32%), Positives = 64/123 (52%)
 Frame = -1

Query: 631 YGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 452
           Y L+ + E  R       +R  AR L  L E++P R+   AALL ++   GL+   +  L
Sbjct: 37  YRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLVPT-RGSL 95

Query: 451 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
           +   +++A +F  RRL TL+ K  MA+ +  A   + Q H+RVG  +V  P+F+V    E
Sbjct: 96  ELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSME 155

Query: 271 KHI 263
             +
Sbjct: 156 DFV 158

---

>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
 Frame = -1

Query: 631 YGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAE--GQD 458
           Y L+ + +  R       +R  AR L  L E++P R+   AALL ++   GL+     Q+
Sbjct: 37  YRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLVPTRGSQE 96

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
             D+V   TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P+F+V   
Sbjct: 97  LCDFV---TASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRS 153

Query: 277 SEKHI 263
            E  +
Sbjct: 154 MEDFV 158

---

>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 38/123 (30%), Positives = 62/123 (50%)
 Frame = -1

Query: 631 YGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 452
           Y L+ + +  R       +R  AR L  L E++  R+   AALL ++   GL+   +  L
Sbjct: 37  YRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLVPT-RGSL 95

Query: 451 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
           +    +TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P+F+V    E
Sbjct: 96  ELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSME 155

Query: 271 KHI 263
             +
Sbjct: 156 DFV 158

---

>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
 Frame = -1

Query: 601 RVQYAL-----SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLA 437
           R  YAL     ++ R  A  +  L E +P R      +L +    GL+    D L+ +  
Sbjct: 41  REHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTS-DTLERIGK 99

Query: 436 LTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDF 257
           +T  +F  RRL  ++   GM +S+  A  L+ Q H+R+G ++V  P+FMV   SE  I +
Sbjct: 100 VTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMITW 159

Query: 256 SLTS 245
           +  S
Sbjct: 160 TKAS 163

---

>RS4_PELCD (Q3A6M1) 30S ribosomal protein S4|
          Length = 209

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = -1

Query: 499 RRMNR-YGLLAEGQ----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 344
           +RM R YGLL +      DK D +  +T EN L    RRL + V++ G A S    R L+
Sbjct: 61  QRMKRTYGLLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALV 120

Query: 343 RQRHIRVGRQIVNVPSFMVR 284
           RQ H  V  + VN+PS+++R
Sbjct: 121 RQGHFLVNGRKVNIPSYVMR 140

---

>RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+  + E
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 134

---

>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 32/129 (24%), Positives = 55/129 (42%)
 Frame = -1

Query: 631 YGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 452
           Y +  + E  +      + R  A  L  LD  +P R+     LL ++   G+L       
Sbjct: 36  YHISKREEYQKYNIICGKFRQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGILPSKSKMS 95

Query: 451 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
           D            RRL  ++ K  M++ +  A  LI Q H+RVG  ++  P+++V    E
Sbjct: 96  DIENKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQGHVRVGPHVITDPAYLVTRSLE 155

Query: 271 KHIDFSLTS 245
             + ++ TS
Sbjct: 156 DFVTWTDTS 164

---

>RS4_FUSNN (Q8RE43) 30S ribosomal protein S4|
          Length = 195

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 32/100 (32%), Positives = 51/100 (51%)
 Frame = -1

Query: 580 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 401
           R +  A+ +  + EK  R+I+E AA  R++               V  LT   +L RRL+
Sbjct: 48  REKQKAKFIYNVMEKQFRKIYEEAA--RKLG--------------VTGLTLIEYLERRLE 91

Query: 400 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            +V++ G AK+   AR ++   HI V  + VN+ SF V+V
Sbjct: 92  NVVYRLGFAKTRRQARQIVSHGHIAVNGRRVNIASFRVKV 131

---

>RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A|
          Length = 207

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 34/104 (32%), Positives = 53/104 (50%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 416
           Q+  SR R    + + L EK   R + G  L R+  RY  +A  +  +   + L     L
Sbjct: 42  QHGASR-RKPTEYAIQLREKQKARRYYGV-LERQFERYFEMASRKKGVTGEVLLQT---L 96

Query: 415 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
            RRL  +V++ G A S   AR +++  HI V  + VN+PS++VR
Sbjct: 97  ERRLDNVVYRMGFAASRAEARQIVKHSHIEVNGRKVNIPSYLVR 140

---

>RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -1

Query: 424 NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 263
           N L  RL  +V +AG+A +I  +R L+  +HI V  +IVN+PSF   +    H+
Sbjct: 86  NLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVNNKIVNIPSFQCSIGDTIHV 139

---

>RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           S  +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL
Sbjct: 36  STAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQILL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 266
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 265 IDFSLTS 245
           IDFS  S
Sbjct: 152 IDFSQKS 158

---

>RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           S  +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL
Sbjct: 36  SAAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 266
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 265 IDFS 254
           IDFS
Sbjct: 152 IDFS 155

---

>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 30/105 (28%), Positives = 48/105 (45%)
 Frame = -1

Query: 577 IRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQT 398
           IR  A  L  L   +P R      LL ++   G+L       D    +T      RRL  
Sbjct: 54  IRRLANKLSLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPV 113

Query: 397 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 263
           ++ +  MA++I  A   I Q H+RVG  ++N P+++V    E ++
Sbjct: 114 IMHRLKMAETIQDAVKFIEQGHVRVGPNLINDPAYLVTRNMEDYV 158

---

>RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V R+IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNRRIVDIPSF 128

---

>RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4|
          Length = 208

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLA---RRL 404
           +    + L L EK   +   G  L  +  RY  +AE Q        +T EN L    RRL
Sbjct: 48  KKPTEYALQLREKQKAKRIYGV-LEAQFRRYFEMAERQP------GITGENLLVILERRL 100

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
             +V++ G+A+S   AR L+R     V  + VN+PS++V+V
Sbjct: 101 DNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKV 141

---

>RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 129

---

>RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G A  + +    +    +     VL       L  RL  +
Sbjct: 40  KKVSQYCIRLEEKQKLRFHHGLAEQQLLKYVRIARRAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  +HI V  + +NVPS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHKHILVNNRAINVPSY 129

---

>RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPSY 129

---

>RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    R++ +Y  +A G       ++L +      RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITE-RQLLKYVRIARGAKGSTGQISLQSSEM---RLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ G+A +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 129

---

>RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNIIFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = -1

Query: 571 NAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLV 392
           N +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++
Sbjct: 40  NKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGPTGQVLL----QLLEMRLDNIL 95

Query: 391 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 96  FRLGMASTIPQARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G   L+ +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +    +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARHAKGSTGEILL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNEHIVDIPSY 129

---

>RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVQIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B|
          Length = 205

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = -1

Query: 433 TAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
           T    L RRL  +VF+AG A ++  AR L+  RH+R+  + VN+PS  + V  E
Sbjct: 87  TLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDE 140

---

>RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSSKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR LI  RH+ V   IV++PS+
Sbjct: 92  DNILFRLGMAATIPQARQLINHRHVLVNGHIVDIPSY 128

---

>RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY 128

---

>RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSTKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RH+ V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHVFVNGHIVDIPSY 128

---

>RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+
Sbjct: 96  LFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 129

---

>RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RT04_RECAM (O21263) Mitochondrial ribosomal protein S4|
          Length = 249

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           L RRL  ++++AG   SI+ AR+L+  +H+ V  +I N+ S++V+
Sbjct: 131 LERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQ 175

---

>RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4|
          Length = 257

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = -1

Query: 421 FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           FL  RL  +VF+  MA +I  AR LI   HIRV  + VN+PS+M +
Sbjct: 107 FLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKVNIPSYMCK 152

---

>RS4_BACFR (Q64NN4) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   KR+    +Y +  R +  A++   + EK  R +FE AA  + +    LL    
Sbjct: 34  GQHGNSRKRKT--SEYGIQLREKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL---- 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
                         L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  ------------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RS4_BACFN (Q5L8D5) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   KR+    +Y +  R +  A++   + EK  R +FE AA  + +    LL    
Sbjct: 34  GQHGNSRKRKT--SEYGIQLREKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL---- 87

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
                         L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  ------------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RS4_PORGI (Q7MTN9) 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 416
           Q+  +R R  + + L L EK   +   G  +L +  R+  L     +   V       FL
Sbjct: 35  QHGNNRRRKTSEYGLQLREKQKAKYTYG--VLEKQFRH--LFHRAQRAKGVTGELLIQFL 90

Query: 415 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
             RL  +VF+ G+A +   AR L+  RHI V   +VN+PS+ V+
Sbjct: 91  EARLDNVVFRLGIAPTRSAARQLVSHRHITVDGSVVNIPSYSVK 134

---

>RS4_BACTN (Q8A4A1) 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 458
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGVQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 457 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
                        L  RL  +VF+ G+A +   AR L+  +HI V  ++VN+PSF V+
Sbjct: 88  -----------QLLEGRLDNVVFRLGIAPTRAAARQLVSHKHITVDGEVVNIPSFAVK 134

---

>RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = -1

Query: 580 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 401
           R    +++ + L+EK   R   G    + +    +  + +     VL       L  RL 
Sbjct: 37  RFGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLD 92

Query: 400 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 93  NILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSY 128

---

>RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRLVDIPSY 128

---

>RR4_OROMI (O78678) Plastid 30S ribosomal protein S4|
          Length = 203

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRFVKKSQYRIRLEEKQKLRFHYGLTERQLLKYIRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +    +     VL   +E     RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLLQLSE----MRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   +V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYVVDIPSY 129

---

>RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +    +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4|
          Length = 200

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   +++L   +Y L  + +   RH+  ++E+  RRIF  A  +  ++         
Sbjct: 34  GQHGPNQRKKL--SEYGLQLQEKQKLRHMYGVNERQFRRIFNDAGKMAGIH--------- 82

Query: 460 DKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 290
                      ENF   L  RL  LV++ G+A++   AR L+   HI V  Q V++PS+ 
Sbjct: 83  ----------GENFMILLESRLDNLVYRMGLARTRRAARQLVNHGHITVDGQRVDIPSYR 132

Query: 289 VR 284
           V+
Sbjct: 133 VK 134

---

>RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLVRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPRARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 28/90 (31%), Positives = 42/90 (46%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL   +F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNTLFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RS4_STRCO (Q9KXP5) 30S ribosomal protein S4|
          Length = 204

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           L RRL  LV ++G+A++I+ AR ++   HI+V  Q V+ PSF VR
Sbjct: 90  LERRLDALVLRSGIARTIYQARQMVVHGHIQVNGQKVDKPSFRVR 134

---

>RS4_THEFY (Q47R66) 30S ribosomal protein S4|
          Length = 203

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALSRI-RNAARHLLTLDEKNPRRIFEGAALLRRMNRYG--LLAE 467
           GE+G R +R      YA+ +  +   R    L EK   R++E A   +R  R G  ++AE
Sbjct: 34  GEHGRRVRRST--SDYAVRQAEKQKLRWYYDLSEKQLARVYENAK--KRPGRTGEEMIAE 89

Query: 466 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
                           L  RL T++ +AG A SI+ AR  I   HI V  + V++PS+ V
Sbjct: 90  ----------------LELRLATVLLRAGFAASIYAARQFINHGHITVDGKKVDIPSYQV 133

Query: 286 R 284
           +
Sbjct: 134 K 134

---

>RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 320
           RR+ R  L   G      VL L     L  RL +LV++AG A +   AR L+   H+ V 
Sbjct: 71  RRLYRVALGRPG------VLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNHSHVLVN 124

Query: 319 RQIVNVPSFMVRVES 275
            + VN+PS +V V S
Sbjct: 125 NKKVNIPSALVEVGS 139

---

>RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGHIVDIPSY 129

---

>RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHMAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4|
          Length = 212

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           S+ ++ + + + L+EK   R   G    + +    L    +     VL       L  RL
Sbjct: 36  SQRKDKSEYRIRLEEKQKLRFHYGITERQLLRYVRLARRAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+   H+ V  ++V++PSF
Sbjct: 92  DNIIFRLGMAPTIPAARQLVNHGHVLVNERVVDIPSF 128

---

>RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic protein)|
          Length = 201

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRPGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  + V++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGRTVDIPSY 128

---

>RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = -1

Query: 487 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 308
           R G + EGQ  +++++       L RRL ++V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGQHGINFMI------LLERRLDSIVYRLGLATTREQARQLVNHGHITVDGKRV 127

Query: 307 NVPSFMVRV 281
           ++PS+ V V
Sbjct: 128 DIPSYEVSV 136

---

>RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 197

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = -1

Query: 562 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 383
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVQIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_DESPS (Q6AP44) 30S ribosomal protein S4|
          Length = 210

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
 Frame = -1

Query: 529 RRIFEGAALLRRMNR----YGLLAEGQDKLDYVLA-----LTAENFLA---RRLQTLVFK 386
           +++ + A  LR   +    YG+L E Q +L +  A     +  EN L    RRL   VF+
Sbjct: 49  KKVSDYAVQLREKQKVKSMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVFR 107

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
           AG A S   AR ++R +HI +  + V++PS+ V
Sbjct: 108 AGFASSRTQARQIVRHKHILINGKRVDIPSYQV 140

---

>RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -1

Query: 508 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 392
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 391 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -1

Query: 508 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 392
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNIL 98

Query: 391 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -1

Query: 508 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 392
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 391 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = -1

Query: 508 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 392
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 391 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHIVDIPSY 121

---

>RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4|
          Length = 228

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           S  R  +++ + L+EK   R   G    + +    +    +     VL       L  RL
Sbjct: 38  SSSRKISQYRIRLEEKQKLRFHYGLTERQLLKYVRVSRRAKGSTGQVLL----QLLEMRL 93

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+   HIRV   +V++PS+
Sbjct: 94  DNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 130

---

>RS4_STAS1 (Q49YF2) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   +++L   +YAL  R +   R+L  + E+  R  FE A      N++G+  E  
Sbjct: 34  GQHGPNQRKKL--SEYALQLREKQKLRYLYGMTERQFRNTFEIAG-----NQHGVHGENF 86

Query: 460 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
            +L           LA RL  +V+  G+A++   AR ++   HI V  + V++PS+ ++ 
Sbjct: 87  MQL-----------LAARLDAVVYSLGLARTRRQARQIVNHGHIEVDGKRVDIPSYTLKP 135

Query: 280 ESE 272
             E
Sbjct: 136 GQE 138

---

>RS4_STAAW (P66564) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAS (Q6G8K8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAR (Q6GFY8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAN (P66563) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAM (P66562) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAC (Q5HF54) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAB (Q2YTH0) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  TFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           +F+ GM  +I  AR L+  RHI V   IV++PS+  +
Sbjct: 96  IFRLGMFPTIPGARQLVNHRHILVNGPIVDIPSYQCK 132

---

>RS4_PELLD (Q3B6D7) 30S ribosomal protein S4|
          Length = 203

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q+   R    + + L L EK   +   G  L ++   Y   A  Q        +T +N  
Sbjct: 36  QHGQGRRGKISEYALQLREKQKMKYLYGI-LEKQFRNYYKKAVSQR------GVTGDNLV 88

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             + RRL  +VF+AG A S   AR L+   H+ V  + VN+PSF+V
Sbjct: 89  KLIERRLDNVVFRAGFAPSRAGARQLVSHSHLLVNGRKVNIPSFLV 134

---

>RS4_STRAW (Q827S7) 30S ribosomal protein S4|
          Length = 204

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = -1

Query: 484 YGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVN 305
           Y   A+ Q K    L +  E    RRL  LV ++G+A++I+ AR ++   HI V  Q V+
Sbjct: 72  YERAAKTQGKTGEALVIELE----RRLDALVLRSGIARTIYQARQMVVHGHIEVNGQKVD 127

Query: 304 VPSFMVR 284
            PSF V+
Sbjct: 128 KPSFRVK 134

---

>RS4_GEOKA (Q5KW49) 30S ribosomal protein S4|
          Length = 200

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   +R+L   +Y L  + +   RH+  ++E+  R+ FE A   +   ++G      
Sbjct: 34  GQHGPGQRRKL--SEYGLQLQEKQKLRHMYGVNERQFRKTFEEAG--KMPGKHG------ 83

Query: 460 DKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 290
                      ENF   L  RL  LV++ G+A++   AR L+   HI V    VN+PS+ 
Sbjct: 84  -----------ENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYR 132

Query: 289 VR 284
           V+
Sbjct: 133 VK 134

---

>RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/94 (24%), Positives = 46/94 (48%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     +L+ T E     RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQILSQTLE----MRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM+ +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILINDNTVDIPSY 129

---

>RS4_SYNY3 (P48939) 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
 Frame = -1

Query: 580 RIRNAARHLLTLDEKNPRRIF---EGAALLRRMNRYGLLAEGQDKLDYVLALTAENF--- 419
           RI      L  L  K+PRR +   +     R+ + Y +  E + KL     +T +     
Sbjct: 10  RIVRRLGELPGLSRKSPRRAYPPGQHGQARRKRSEYAIRLEEKQKLRLNYGITEKQLVRY 69

Query: 418 ------------------LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
                             L  RL   VF+ GMA +I  AR L+   HI V  Q+V++PS+
Sbjct: 70  VKKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGHITVNGQVVDIPSY 129

Query: 292 MVR 284
             R
Sbjct: 130 QCR 132

---

>RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNSTVDIPSY 129

---

>RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G A  + +    +  + +     +L       L  RL   
Sbjct: 40  KKVSQYRIRLEEKQKLRSHYGLAERQLLKYMRIARKAKGSTGQILL----QLLEMRLDNT 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GM+ +I  AR L+  RHI +   +V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHISINNDVVDIPSY 129

---

>RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNNTVDIPSY 129

---

>RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    +    + +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFNYGLRERQLRKYFSIAIKTRGSTGKVLM----QLLEMRLDNIIFR 97

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4|
          Length = 207

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -1

Query: 436 LTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           LT EN    L  RL  LV +AG A++I  AR  +  RHI V  ++V+ PSF V+
Sbjct: 82  LTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRHILVDGKLVDRPSFRVK 135

---

>RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 184

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = -1

Query: 637 GEYGLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 461
           G++G   +R+L   +Y L  + +   RH+  ++E+  R+ FE A   +   ++G      
Sbjct: 33  GQHGPGQRRKL--SEYGLQLQEKQKLRHMYGVNERQFRKTFEEAG--KMPGKHG------ 82

Query: 460 DKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 290
                      ENF   L  RL  LV++ G+A++   AR L+   HI V    VN+PS+ 
Sbjct: 83  -----------ENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHIIVDGSRVNIPSYR 131

Query: 289 VR 284
           V+
Sbjct: 132 VK 133

---

>RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -1

Query: 541 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 401
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 400 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -1

Query: 541 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 401
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 400 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RS4_LEGPA (Q5X835) 30S ribosomal protein S4|
          Length = 206

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
 Frame = -1

Query: 541 EKNPRRIFEGAAL-----LRRMNRYGLLAEGQDKLDYVLAL-----TAENFLA---RRLQ 401
           +K PR    G  L     +RR+  YG+L E Q +  Y  A      T EN +A   RRL 
Sbjct: 43  DKKPRLNSYGIQLREKQKIRRL--YGIL-EKQFRNYYKKAARQKGSTGENLMALLERRLD 99

Query: 400 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
            +V++ G A +   AR L+  + I V  ++VNVPSF+V
Sbjct: 100 NVVYRMGFASTRAEARQLVAHKAILVNDKVVNVPSFLV 137

---

>RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -1

Query: 565 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 386
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 385 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            GMA +I  AR L+  RHI V  +I+++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIMDIPSY 121

---

>RS4_CORGL (Q8NSV4) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   AE   +       T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRY--YAEANRRA----GKTGENLV 86

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             L  RL  +V++AG+A +   AR L+   H  V  + ++VPSF V
Sbjct: 87  VLLESRLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRV 132

---

>RS4_COREF (Q8FS34) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   A  +         T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRYYAEANRRP------GKTGENLV 86

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             L  RL  +V++AG+A++   AR L+   H  V  + V+VPSF V
Sbjct: 87  VMLESRLDNVVYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRV 132

---

>RS4_CORAM (Q3S664) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q   +RI+ +  +LL L EK   +   G  L R+  RY + A  Q         T +N  
Sbjct: 35  QAGRNRIKES-EYLLQLQEKQKAKYTYGV-LERQFRRYYVEANRQP------GKTGDNLV 86

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             L  RL  +V++AG+A++   AR L+   H  V  +  NVPS+ V
Sbjct: 87  VLLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYRV 132

---

>RS4_THET8 (P80373) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 33/108 (30%), Positives = 47/108 (43%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 416
           Q+   R R  + + + L EK   R   G +  +  N    L E   K   V        L
Sbjct: 41  QHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRN----LFEEASKKKGVTGSVFLGLL 96

Query: 415 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
             RL  +V++ G A S   AR L+R  HI V  + V++PS+ VR   E
Sbjct: 97  ESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDE 144

---

>RS4_THET2 (P62664) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 33/108 (30%), Positives = 47/108 (43%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 416
           Q+   R R  + + + L EK   R   G +  +  N    L E   K   V        L
Sbjct: 41  QHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRN----LFEEASKKKGVTGSVFLGLL 96

Query: 415 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 272
             RL  +V++ G A S   AR L+R  HI V  + V++PS+ VR   E
Sbjct: 97  ESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDE 144

---

>RS4_GEOSL (Q749B2) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = -1

Query: 451 DYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  +R
Sbjct: 82  DRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARILVRHNHFTLNGKKANIPSIQLR 140

---

>RS4_GEOMG (Q39XY0) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -1

Query: 460 DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 290
           ++ D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  
Sbjct: 79  EEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARILVRHNHFTLNGRKANIPSIQ 138

Query: 289 VR 284
           ++
Sbjct: 139 LK 140

---

>RS4_LACJO (Q74K05) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = -1

Query: 487 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 308
           R G + EG+  ++++        L RRL  +V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGKHGVNFMA------LLERRLDNIVYRLGLASTREQARQLVNHGHILVDGKRV 127

Query: 307 NVPSFMVRVESE 272
           ++PS+ V+V  E
Sbjct: 128 DIPSYEVKVGQE 139

---

>RS4_NITWN (Q3ST14) 30S ribosomal protein S4|
          Length = 205

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = -1

Query: 484 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHI 329
           YG ++E Q    YV A      + EN    L RRL T+V++A    +I  AR  I   H+
Sbjct: 62  YGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGHV 121

Query: 328 RVGRQIVNVPSFMVRV 281
           +V  + VN+PS+ ++V
Sbjct: 122 KVNGRRVNIPSYKLKV 137

---

>RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+  RHI V  +IV++ S+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASY 128

---

>RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSVKKSQYRIRLEEKQKLRFHYGLTEHQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+   HI V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPQARQLVNHGHILVNGRIVDIPSY 128

---

>RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4|
          Length = 197

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNR----YGLLAEGQDKLDYVLALTAEN-- 422
           S   N     L +D+   R+I +    L    R    YGL      +   +   T  +  
Sbjct: 16  SNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYGLTERQLLRYVRIARRTRGSTG 75

Query: 421 -----FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
                 L  RL  ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 76  QVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVDIPSY 123

---

>RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -1

Query: 514 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 398
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLRGKHGENFMILLEQRLDN 96

Query: 397 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_LISMF (Q71Z71) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -1

Query: 514 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 398
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 397 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_LISIN (Q92BB2) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = -1

Query: 514 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 398
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 397 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAA---LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           +  +++ + L+EK   R   G     LLR M R    A+G    + +        L  RL
Sbjct: 40  KKPSQYRIRLEEKQKLRYNYGVTEKQLLRYMQR-ARRAKGSSGENLL------QLLEMRL 92

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
            T +F+ GMA ++  AR LI   HI V  Q VN+PS+
Sbjct: 93  DTTIFRLGMAPTMLSARQLITHGHILVSEQRVNIPSY 129

---

>RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA ++  AR L+  RHI +   +V++PS+
Sbjct: 96  LFRLGMALTVPGARQLVNHRHILINNSMVDIPSY 129

---

>RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RS4_THETN (Q8R7Y1) 30S ribosomal protein S4|
          Length = 206

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQ-----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 344
           +++ RY  + E Q     ++ + +  +T EN L    RRL  +V++ G A S   AR L+
Sbjct: 61  QKLKRYYGILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQLV 120

Query: 343 RQRHIRVGRQIVNVPSFMVR 284
              HI V  + V++PS++V+
Sbjct: 121 SHGHIEVNGKKVDIPSYLVK 140

---

>RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           L  RL  ++F+ G+  +I  AR LI  RHI V  +IV+VPSF
Sbjct: 90  LEMRLDNILFRLGVVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
 Frame = -1

Query: 628 GLRCKREL*RVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 452
           GL  KR     Q  L  + +  +++ + L+EK   R   G    R++ RY  +A    K 
Sbjct: 20  GLTTKRRKLTEQNKLQDKKQKKSQYRIRLEEKQKLRFHYGLTE-RQLLRYIRIAR---KA 75

Query: 451 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
                 T    L  RL   +F+ GMA +I  AR L+   HI +  ++V++PS+
Sbjct: 76  KGSTGQTLLQLLEMRLDNTIFRLGMAATIRAARQLVNHGHIVLNERVVDIPSY 128

---

>RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = -1

Query: 418 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           L  RL  ++F+ G++ +I  AR L+  RHI V  QIV++PS+
Sbjct: 82  LEMRLDNIIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSY 123

---

>RS4_STAHJ (Q4L760) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   H+ V  + V++PS+ ++
Sbjct: 102 GLARTRRQARQLVGHGHVEVDGRRVDIPSYSLK 134

---

>RS4_STAES (Q8CS54) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = -1

Query: 499 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 383
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 382 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 284
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RS4_IDILO (Q5QXV7) 30S ribosomal protein S4|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = -1

Query: 433 TAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 278
           T EN L    +RL  +V++ G A +   AR L+  + + V  Q+VN+PSF VR E
Sbjct: 86  TGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKVRPE 140

---

>RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/94 (26%), Positives = 44/94 (46%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           R  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  RKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ G+A +I  AR L+  RH+ V    V++PSF
Sbjct: 96  IFRLGLAPTIPGARQLVNHRHVLVNDCTVDIPSF 129

---

>RS4_TROWT (Q83GC9) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = -1

Query: 499 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 341
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 340 QRHIRVGRQIVNVPSFMV 287
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RS4_TROW8 (Q83HV1) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = -1

Query: 499 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 341
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 340 QRHIRVGRQIVNVPSFMV 287
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RS4_CORJK (Q4JTC1) 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q   +RI+ +  +LL L EK   +   G  L ++  RY   A  +         T +N  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKAKYTYGV-LEKQFRRYYAEANRRP------GKTGDNLV 86

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             L  RL  +V++AG+A++   AR L+   H  V  + VNVPSF V
Sbjct: 87  ILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKV 132

---

>RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 26/97 (26%), Positives = 45/97 (46%)
 Frame = -1

Query: 583 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 404
           SR    +++ + L+EK   R   G    + +    +  +       VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLL----QLLEMRL 91

Query: 403 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
             ++F+ GMA +I  AR L+   HI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSY 128

---

>RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4|
          Length = 205

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
 Frame = -1

Query: 496 RMNRYGLLAEGQDKLDYVLALTAEN---------------------FLARRLQTLVFKAG 380
           ++++YG+  + + KL Y   +T +                      +L  RL   VF+ G
Sbjct: 44  KLSQYGIRLQEKQKLKYNYGVTEKQLLLYIRKARTIKGSTGQMLLQYLEMRLDNTVFRLG 103

Query: 379 MAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +A +I  AR L+   HI V  +IV +PS+
Sbjct: 104 LAPTIAGARQLVNHGHIMVNNRIVTIPSY 132

---

>RS4_CORDI (Q6NJ64) 30S ribosomal protein S4|
          Length = 201

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = -1

Query: 595 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 419
           Q   +RI+ +  +LL L EK   R   G  L ++  RY   A      + +   T +N  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFTYGV-LEKQFRRYYAEA------NRLPGKTGDNLV 86

Query: 418 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 287
             L  RL  +V++AG+A++   AR L+   H  V  + +NVPS+ V
Sbjct: 87  ILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSYRV 132

---

>RS4_LACPL (Q88UX0) 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = -1

Query: 547 LDEKNPRRIFEGAALLRRMNRY---GLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGM 377
           L EK   R+  G    +  N +   G + EG+  +++++       L RRL  +V++ G+
Sbjct: 51  LREKQKLRMMYGLTERQFANLFIKAGKIREGKHGVNFMI------LLERRLDNMVYRLGL 104

Query: 376 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 281
           A +   AR L+   HI V  + V++PS+ V V
Sbjct: 105 ATTRRQARQLVNHGHITVDGKRVDIPSYEVSV 136

---

>RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/94 (24%), Positives = 44/94 (46%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA +I  AR L+  +HI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHQHILINNNTVDIPSY 129

---

>RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = -1

Query: 574 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 395
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 394 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 293
           +F+ GMA ++  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTVPGARQLVNHRHILVNDCIVDIPSY 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,923,794
Number of Sequences: 219361
Number of extensions: 1593835
Number of successful extensions: 4640
Number of sequences better than 10.0: 384
Number of HSP's better than 10.0 without gapping: 4509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4615
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---