Clone Name	rbags5n06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clon...	492	e-136
2	ref|XM_466485.1| Oryza sativa (japonica cultivar-group), mRNA	486	e-134
3	gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, comp...	476	e-131
4	ref|XM_472843.1| Oryza sativa (japonica cultivar-group), predic...	341	1e-90
5	dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clon...	341	1e-90
6	gb|AY103559.1| Zea mays PCO112591 mRNA sequence	309	4e-81
7	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	200	3e-48
8	dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D...	200	3e-48
9	dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic D...	200	3e-48
10	emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...	159	1e-35
11	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
12	emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16	103	5e-19
13	gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence	74	5e-10
14	ref|NM_106066.3| Arabidopsis thaliana structural constituent of ...	68	3e-08
15	gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal prote...	68	3e-08
16	emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Co...	68	3e-08
17	gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal prote...	68	3e-08
18	ref|NM_106064.2| Arabidopsis thaliana structural constituent of ...	66	1e-07
19	ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 s...	66	1e-07
20	gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal prote...	66	1e-07
21	gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal prote...	66	1e-07
22	gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal prote...	66	1e-07
23	gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete se...	66	1e-07
24	gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr...	64	4e-07
25	gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P...	62	2e-06
26	emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
27	gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete s...	48	0.026
28	dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal p...	48	0.026
29	gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete seq...	44	0.41
30	gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosoma...	42	1.6
31	ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (...	42	1.6
32	emb|BX649433.4| Zebrafish DNA sequence from clone DKEY-215P16 in...	42	1.6
33	emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in ...	42	1.6
34	emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph...	42	1.6
35	dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate deh...	42	1.6
36	emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on ch...	42	1.6
37	gb|BC076927.1| Xenopus tropicalis matrix metalloproteinase 9 (ge...	40	6.3
38	gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal ...	40	6.3
39	gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal ...	40	6.3
40	gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosom...	40	6.3
41	ref|XM_591972.2| PREDICTED: Bos taurus similar to Sodium/hydroge...	40	6.3
42	ref|XM_716459.1| Candida albicans SC5314 putative 26S proteasome...	40	6.3
43	ref|XM_716188.1| Candida albicans SC5314 putative 26S proteasome...	40	6.3
44	ref|XM_752221.1| Ustilago maydis 521 hypothetical protein (UM011...	40	6.3
45	ref|XM_533873.2| PREDICTED: Canis familiaris similar to peptidyl...	40	6.3
46	gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosom...	40	6.3
47	gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome...	40	6.3
48	gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete se...	40	6.3
49	gb|AF517879.1| Griffithsia japonica isolate Gj550 ribosome prote...	40	6.3
50	emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ...	40	6.3
51	gb|AY831461.1| Pseudomonas putida plasmid pKW1 putative porin ge...	40	6.3
52	ref|NM_001006842.1| Xenopus tropicalis matrix metalloproteinase ...	40	6.3
53	gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe...	40	6.3
54	emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on ch...	40	6.3
55	gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA	40	6.3
56	dbj|AB226127.1| Aspergillus oryzae cDNA, contig sequence: AoEST2984	40	6.3
57	dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038	40	6.3
58	gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Par...	40	6.3
59	gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome...	40	6.3
60	gb|AC078927.20| Homo sapiens 12 BAC RP11-745O10 (Roswell Park Ca...	40	6.3
61	gb|AE017221.1| Thermus thermophilus HB27, complete genome	40	6.3
62	emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on ch...	40	6.3
63	gb|U93491.1|MUU93491 Meriones unguiculatus NHE-2 mRNA, partial cds	40	6.3

---

>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full
           insert sequence
          Length = 1030

 Score =  492 bits (248), Expect = e-136
 Identities = 368/408 (90%)
 Strand = Plus / Minus

                                                                       
Query: 62  aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 121
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 733 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 674

                                                                       
Query: 122 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 181
           ||||   || ||||| |||||| | |||||||||||||||||||||||||| |  |||||
Sbjct: 673 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 614

                                                                       
Query: 182 ctggtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacag 241
           |||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 613 ctggtcatccttcttgaagtcgggcagattcttggttgcctccttctctgtctcaaaaag 554

                                                                       
Query: 242 ctccccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaa 301
            || || || |||||||| ||| | |||||||||||||  ||||||||||||||||||||
Sbjct: 553 ttcaccctcggtcttcttggcctttgccttcttgtcccgggcaaagtacttgtcatcaaa 494

                                                                       
Query: 302 cttctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctg 361
           ||| ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 493 cttatccaccttaacaccagagatgtcaaccttcgtggatgtggcaatgacgtaggcctg 434

                                                                       
Query: 362 gttcacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggcc 421
           |||||| ||||| |  || || ||||||||||| |||||||| |||||||||||||||||
Sbjct: 433 gttcacacggcggatgggcactccattgatcttaaaaggtccggtgatgaggagcaggcc 374

                                                           
Query: 422 agacttgagctgcttgaggaacaccacgcgcttccccatgtacctccc 469
            ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 373 ggacttgagctgcttgaggaacacgacgcgcttccccatgtacctccc 326

---

>ref|XM_466485.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  486 bits (245), Expect = e-134
 Identities = 365/405 (90%)
 Strand = Plus / Minus

                                                                       
Query: 65  ttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagata 124
           |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 660 ttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaagata 601

                                                                       
Query: 125 gttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctg 184
           |   || ||||| |||||| | |||||||||||||||||||||||||| |  ||||||||
Sbjct: 600 ggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagccttctg 541

                                                                       
Query: 185 gtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctc 244
           ||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| || ||
Sbjct: 540 gtcatccttcttgaagtcgggcagattcttggttgcctccttctctgtctcaaaaagttc 481

                                                                       
Query: 245 cccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaactt 304
            || || |||||||| ||| | |||||||||||||  |||||||||||||||||||||||
Sbjct: 480 accctcggtcttcttggcctttgccttcttgtcccgggcaaagtacttgtcatcaaactt 421

                                                                       
Query: 305 ctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggtt 364
            ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 420 atccaccttaacaccagagatgtcaaccttcgtggatgtggcaatgacgtaggcctggtt 361

                                                                       
Query: 365 cacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccaga 424
           ||| ||||| |  || || ||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 360 cacacggcggatgggcactccattgatcttaaaaggtccggtgatgaggagcaggccgga 301

                                                        
Query: 425 cttgagctgcttgaggaacaccacgcgcttccccatgtacctccc 469
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 cttgagctgcttgaggaacacgacgcgcttccccatgtacctccc 256

---

>gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds
          Length = 686

 Score =  476 bits (240), Expect = e-131
 Identities = 366/408 (89%)
 Strand = Plus / Minus

                                                                       
Query: 62  aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 121
           |||||| |||||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 682 aacttaaaaggtcatctcatgcggcttgtcgccatccctgagggagaaccgggcaccaag 623

                                                                       
Query: 122 atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 181
           ||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| ||||
Sbjct: 622 ataatttttaaggtctgggacggcatcgatagccttgatcaactcagcgtcaatgacctt 563

                                                                       
Query: 182 ctggtcatcctttttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacag 241
           |||||||||||| |||||||| ||||  ||||||||||||||||| || | |||||| ||
Sbjct: 562 ctggtcatccttcttgaagtctggcaaattcttggttgcctccttatccgactcaaatag 503

                                                                       
Query: 242 ctccccttcagtcttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaa 301
           ||| || ||||||||||||||||| | |||||| |||||||| |||||||||||||||||
Sbjct: 502 ctcgccctcagtcttctttgccctagtcttcttctccctagcgaagtacttgtcatcaaa 443

                                                                       
Query: 302 cttctccaccttaacaccagagatgtcaacctttgtggatgtggcaatgacataagcctg 361
           ||||| ||| |||||   ||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 442 cttctgcacattaaccttagagatgtcgacctttgtggatgtggcaatgacgtaagcctg 383

                                                                       
Query: 362 gttcacccggcgaactgggacaccattgatcttgaaaggtccagtgatgaggagcaggcc 421
           |||||| | ||| | ||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 382 gttcactctgcggattggcacgccattgatcttgaaaggtccagtgatgaggagaaggcc 323

                                                           
Query: 422 agacttgagctgcttgaggaacaccacgcgcttccccatgtacctccc 469
            |||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 ggactggagctgcttgaggaacaccacgcgctttcccatgtacctccc 275

---

>ref|XM_472843.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 669

 Score =  341 bits (172), Expect = 1e-90
 Identities = 340/396 (85%)
 Strand = Plus / Minus

                                                                       
Query: 74  catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 133
           |||||| ||||||||||| |||||||||||||| ||||| |||||||| ||  | || ||
Sbjct: 660 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 601

                                                                       
Query: 134 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 193
            || |||||||| || ||||| ||||||||||| ||||| |   | |||||||| |||||
Sbjct: 600 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 541

                                                                       
Query: 194 tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 253
           |||||| || ||||||||||||||||||||||||||||||||||| || || || || ||
Sbjct: 540 tttgaactccggcaggttcttggttgcctccttctcagtctcaaaaagttcaccctcggt 481

                                                                       
Query: 254 cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 313
           |||||| ||| |   ||||||||||||||  |||||||||||||||||||||||||| ||
Sbjct: 480 cttcttcgccttctgcttcttgtccctagagaagtacttgtcatcaaacttctccacatt 421

                                                                       
Query: 314 aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 373
           |||||||||||| |||||||||||||| || |||||||| || | ||||||||| |||||
Sbjct: 420 aacaccagagatatcaacctttgtggacgtagcaatgacgtagggctggttcacacggcg 361

                                                                       
Query: 374 aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 433
            |  || || ||||||||||| |||||||| |||| ||| |||||||| || ||||||||
Sbjct: 360 gatcggaactccattgatcttaaaaggtccggtgacgagaagcaggccggatttgagctg 301

                                               
Query: 434 cttgaggaacaccacgcgcttccccatgtacctccc 469
           |||||||||||| ||||||||||||||| |||||||
Sbjct: 300 cttgaggaacacgacgcgcttccccatgaacctccc 265

---

>dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D20, full
           insert sequence
          Length = 933

 Score =  341 bits (172), Expect = 1e-90
 Identities = 340/396 (85%)
 Strand = Plus / Minus

                                                                       
Query: 74  catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 133
           |||||| ||||||||||| |||||||||||||| ||||| |||||||| ||  | || ||
Sbjct: 714 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 655

                                                                       
Query: 134 gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 193
            || |||||||| || ||||| ||||||||||| ||||| |   | |||||||| |||||
Sbjct: 654 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 595

                                                                       
Query: 194 tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 253
           |||||| || ||||||||||||||||||||||||||||||||||| || || || || ||
Sbjct: 594 tttgaactccggcaggttcttggttgcctccttctcagtctcaaaaagttcaccctcggt 535

                                                                       
Query: 254 cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 313
           |||||| ||| |   ||||||||||||||  |||||||||||||||||||||||||| ||
Sbjct: 534 cttcttcgccttctgcttcttgtccctagagaagtacttgtcatcaaacttctccacatt 475

                                                                       
Query: 314 aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 373
           |||||||||||| |||||||||||||| || |||||||| || | ||||||||| |||||
Sbjct: 474 aacaccagagatatcaacctttgtggacgtagcaatgacgtagggctggttcacacggcg 415

                                                                       
Query: 374 aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 433
            |  || || ||||||||||| |||||||| |||| ||| |||||||| || ||||||||
Sbjct: 414 gatcggaactccattgatcttaaaaggtccggtgacgagaagcaggccggatttgagctg 355

                                               
Query: 434 cttgaggaacaccacgcgcttccccatgtacctccc 469
           |||||||||||| ||||||||||||||| |||||||
Sbjct: 354 cttgaggaacacgacgcgcttccccatgaacctccc 319

---

>gb|AY103559.1| Zea mays PCO112591 mRNA sequence
          Length = 1361

 Score =  309 bits (156), Expect = 4e-81
 Identities = 330/388 (85%)
 Strand = Plus / Minus

                                                                        
Query: 74   catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 133
            ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | || ||
Sbjct: 1055 catctcatggggcttgtcaccatccctgagagagaaccgggcgccaagataggttttcag 996

                                                                        
Query: 134  gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 193
             ||  ||||||| ||||||||||||||||   ||| ||| |  |||||||||||||||||
Sbjct: 995  ctccaggacagcctcgatagccttgatcagagcagaatccacagccttctggtcatcctt 936

                                                                        
Query: 194  tttgaagtcaggcaggttcttggttgcctccttctcagtctcaaacagctccccttcagt 253
             ||||||||||||||   ||||| ||||||||| || |||||||| ||||| || || ||
Sbjct: 935  cttgaagtcaggcagtgacttggatgcctccttttctgtctcaaaaagctcgccctcggt 876

                                                                        
Query: 254  cttctttgccctggccttcttgtccctagcaaagtacttgtcatcaaacttctccacctt 313
            ||||||  || |   |||||| ||||| |||||||||||||||||||||||  | || | 
Sbjct: 875  cttcttcaccttctgcttcttctccctggcaaagtacttgtcatcaaacttggcgacatc 816

                                                                        
Query: 314  aacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcg 373
            |||||||||||||||||| || || ||||| ||||||||||| | ||||||||| |||||
Sbjct: 815  aacaccagagatgtcaactttggttgatgtagcaatgacataggtctggttcacacggcg 756

                                                                        
Query: 374  aactgggacaccattgatcttgaaaggtccagtgatgaggagcaggccagacttgagctg 433
             |  || || ||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 755  gatcggtactccattgatcttgaaaggcccagagataaggagcaggccagacttgagctg 696

                                        
Query: 434  cttgaggaacaccacgcgcttccccatg 461
            |||||| |||||||| | ||||||||||
Sbjct: 695  cttgagaaacaccactctcttccccatg 668

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Plus

                                                                            
Query: 62       aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 121
                ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 22901790 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 22901849

                                                                            
Query: 122      atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 181
                ||||   || ||||| |||||| | |||||||||||||||||||||||||| |  |||||
Sbjct: 22901850 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 22901909

                                                         
Query: 182      ctggtcatcctttttgaagtcaggcaggttcttggttgcct 222
                |||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 22901910 ctggtcatccttcttgaagtcgggcagattcttggttgcct 22901950



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                            
Query: 220      cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 279
                |||||||||| |||||||| || || || || |||||||| ||| | |||||||||||||
Sbjct: 22902042 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 22902101

                                                                            
Query: 280      tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 339
                  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 22902102 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 22902161

                                                                            
Query: 340      atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 399
                ||||||||||||| || ||||||||||| ||||| |  || || ||||||||||| ||||
Sbjct: 22902162 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 22902221

                    
Query: 400      gtcc 403
                ||||
Sbjct: 22902222 gtcc 22902225



 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                            
Query: 405      gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 464
                ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 22903064 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 22903123

                     
Query: 465      ctccc 469
                |||||
Sbjct: 22903124 ctccc 22903128

---

>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Plus

                                                                         
Query: 62    aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 121
             ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 21592 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 21651

                                                                         
Query: 122   atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 181
             ||||   || ||||| |||||| | |||||||||||||||||||||||||| |  |||||
Sbjct: 21652 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 21711

                                                      
Query: 182   ctggtcatcctttttgaagtcaggcaggttcttggttgcct 222
             |||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 21712 ctggtcatccttcttgaagtcgggcagattcttggttgcct 21752



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 279
             |||||||||| |||||||| || || || || |||||||| ||| | |||||||||||||
Sbjct: 21844 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 21903

                                                                         
Query: 280   tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 339
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 21904 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 21963

                                                                         
Query: 340   atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 399
             ||||||||||||| || ||||||||||| ||||| |  || || ||||||||||| ||||
Sbjct: 21964 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 22023

                 
Query: 400   gtcc 403
             ||||
Sbjct: 22024 gtcc 22027



 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                         
Query: 405   gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 464
             ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 22866 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 22925

                  
Query: 465   ctccc 469
             |||||
Sbjct: 22926 ctccc 22930

---

>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0006O15
          Length = 139723

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Plus

                                                                          
Query: 62     aacttagaaggtcatctcatggggcttgtcaccgtccctgagagagaaccgggcaccaag 121
              ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 135128 aacttagaatgtcatctcatggggcttgtcgccgtccctgagagagaaccgggcaccaag 135187

                                                                          
Query: 122    atagttcttaaggtcagggacagcatcgatagccttgatcaactcagcatcaatggcctt 181
              ||||   || ||||| |||||| | |||||||||||||||||||||||||| |  |||||
Sbjct: 135188 ataggatttcaggtctgggacaacctcgatagccttgatcaactcagcatccacagcctt 135247

                                                       
Query: 182    ctggtcatcctttttgaagtcaggcaggttcttggttgcct 222
              |||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 135248 ctggtcatccttcttgaagtcgggcagattcttggttgcct 135288



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                          
Query: 220    cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 279
              |||||||||| |||||||| || || || || |||||||| ||| | |||||||||||||
Sbjct: 135380 cctccttctctgtctcaaaaagttcaccctcggtcttcttggcctttgccttcttgtccc 135439

                                                                          
Query: 280    tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 339
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 135440 gggcaaagtacttgtcatcaaacttatccaccttaacaccagagatgtcaaccttcgtgg 135499

                                                                          
Query: 340    atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 399
              ||||||||||||| || ||||||||||| ||||| |  || || ||||||||||| ||||
Sbjct: 135500 atgtggcaatgacgtaggcctggttcacacggcggatgggcactccattgatcttaaaag 135559

                  
Query: 400    gtcc 403
              ||||
Sbjct: 135560 gtcc 135563



 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                          
Query: 405    gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 464
              ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 136402 gtgatgaggagcaggccggacttgagctgcttgaggaacacgacgcgcttccccatgtac 136461

                   
Query: 465    ctccc 469
              |||||
Sbjct: 136462 ctccc 136466

---

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/184 (85%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 279
             ||||||||||||||||||| || || || || |||||||| ||| |   |||||||||||
Sbjct: 79304 cctccttctcagtctcaaaaagttcaccctcggtcttcttcgccttctgcttcttgtccc 79363

                                                                         
Query: 280   tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 339
             |||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 79364 tagagaagtacttgtcatcaaacttctccacattaacaccagagatatcaacctttgtgg 79423

                                                                         
Query: 340   atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 399
             | || |||||||| || | ||||||||| ||||| |  || || ||||||||||| ||||
Sbjct: 79424 acgtagcaatgacgtagggctggttcacacggcggatcggaactccattgatcttaaaag 79483

                 
Query: 400   gtcc 403
             ||||
Sbjct: 79484 gtcc 79487



 Score =  113 bits (57), Expect = 5e-22
 Identities = 126/149 (84%)
 Strand = Plus / Plus

                                                                         
Query: 74    catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 133
             |||||| ||||||||||| |||||||||||||| ||||| |||||||| ||  | || ||
Sbjct: 79067 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 79126

                                                                         
Query: 134   gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 193
              || |||||||| || ||||| ||||||||||| ||||| |   | |||||||| |||||
Sbjct: 79127 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 79186

                                          
Query: 194   tttgaagtcaggcaggttcttggttgcct 222
             |||||| || |||||||||||||||||||
Sbjct: 79187 tttgaactccggcaggttcttggttgcct 79215



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                         
Query: 405   gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 464
             |||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 80536 gtgacgagaagcaggccggatttgagctgcttgaggaacacgacgcgcttccccatgaac 80595

                  
Query: 465   ctccc 469
             |||||
Sbjct: 80596 ctccc 80600

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/184 (85%)
 Strand = Plus / Plus

                                                                            
Query: 220      cctccttctcagtctcaaacagctccccttcagtcttctttgccctggccttcttgtccc 279
                ||||||||||||||||||| || || || || |||||||| ||| |   |||||||||||
Sbjct: 23636623 cctccttctcagtctcaaaaagttcaccctcggtcttcttcgccttctgcttcttgtccc 23636682

                                                                            
Query: 280      tagcaaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtgg 339
                |||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 23636683 tagagaagtacttgtcatcaaacttctccacattaacaccagagatatcaacctttgtgg 23636742

                                                                            
Query: 340      atgtggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaag 399
                | || |||||||| || | ||||||||| ||||| |  || || ||||||||||| ||||
Sbjct: 23636743 acgtagcaatgacgtagggctggttcacacggcggatcggaactccattgatcttaaaag 23636802

                    
Query: 400      gtcc 403
                ||||
Sbjct: 23636803 gtcc 23636806



 Score =  113 bits (57), Expect = 5e-22
 Identities = 126/149 (84%)
 Strand = Plus / Plus

                                                                            
Query: 74       catctcatggggcttgtcaccgtccctgagagagaaccgggcaccaagatagttcttaag 133
                |||||| ||||||||||| |||||||||||||| ||||| |||||||| ||  | || ||
Sbjct: 23636386 catctcgtggggcttgtcgccgtccctgagagaaaaccgcgcaccaaggtaagttttcag 23636445

                                                                            
Query: 134      gtcagggacagcatcgatagccttgatcaactcagcatcaatggccttctggtcatcctt 193
                 || |||||||| || ||||| ||||||||||| ||||| |   | |||||||| |||||
Sbjct: 23636446 atccgggacagcttcaatagctttgatcaactcggcatccacaactttctggtcctcctt 23636505

                                             
Query: 194      tttgaagtcaggcaggttcttggttgcct 222
                |||||| || |||||||||||||||||||
Sbjct: 23636506 tttgaactccggcaggttcttggttgcct 23636534



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 405      gtgatgaggagcaggccagacttgagctgcttgaggaacaccacgcgcttccccatgtac 464
                |||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 23637855 gtgacgagaagcaggccggatttgagctgcttgaggaacacgacgcgcttccccatgaac 23637914

                     
Query: 465      ctccc 469
                |||||
Sbjct: 23637915 ctccc 23637919

---

>emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16
          Length = 1015

 Score =  103 bits (52), Expect = 5e-19
 Identities = 106/124 (85%)
 Strand = Plus / Minus

                                                                       
Query: 285 aagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatgtg 344
           |||||||||||||||||||||||||| || |||||||| ||||||||||| || || |||
Sbjct: 541 aagtacttgtcatcaaacttctccacattgacaccagaaatgtcaaccttggttgaggtg 482

                                                                       
Query: 345 gcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaaggtcca 404
           ||||| ||||| || |||||||| || |  |  ||||||||||||| ||| ||||| |||
Sbjct: 481 gcaataacataggcttggttcacacgcctcagagggacaccattgaccttaaaaggacca 422

               
Query: 405 gtga 408
           ||||
Sbjct: 421 gtga 418

---

>gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence
          Length = 693

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 100/121 (82%)
 Strand = Plus / Plus

                                                                       
Query: 283 caaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatg 342
           |||| ||||||||||| || ||||| |  || || ||||||||||||||||||||||| |
Sbjct: 309 caaaatacttgtcatcgaatttctcaatgttgactccagagatgtcaacctttgtggaag 368

                                                                       
Query: 343 tggcaatgacataagcctggttcacccggcgaactgggacaccattgatcttgaaaggtc 402
           |  |||| ||||| |||||||| || || |  | ||| ||||||||||||||||| ||||
Sbjct: 369 ttccaatcacataggcctggttaacacgtctcaatggaacaccattgatcttgaatggtc 428

            
Query: 403 c 403
           |
Sbjct: 429 c 429

---

>ref|NM_106066.3| Arabidopsis thaliana structural constituent of ribosome AT1G74060
           mRNA, complete cds
          Length = 967

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 372
           |||| ||||| ||||||||||||||||| ||  |||||||||| |||||||| || || |
Sbjct: 522 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 463

                                             
Query: 373 gaactgggacaccattgatcttgaaaggtccagt 406
             |  || ||||||||||||||||| ||||||||
Sbjct: 462 tcagaggaacaccattgatcttgaatggtccagt 429

---

>gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (F2P9.7)
           mRNA, complete cds
          Length = 942

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 372
           |||| ||||| ||||||||||||||||| ||  |||||||||| |||||||| || || |
Sbjct: 517 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 458

                                             
Query: 373 gaactgggacaccattgatcttgaaaggtccagt 406
             |  || ||||||||||||||||| ||||||||
Sbjct: 457 tcagaggaacaccattgatcttgaatggtccagt 424

---

>emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB75ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 942

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 372
           |||| ||||| ||||||||||||||||| ||  |||||||||| |||||||| || || |
Sbjct: 514 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 455

                                             
Query: 373 gaactgggacaccattgatcttgaaaggtccagt 406
             |  || ||||||||||||||||| ||||||||
Sbjct: 454 tcagaggaacaccattgatcttgaatggtccagt 421

---

>gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74060)
           mRNA, complete cds
          Length = 789

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 372
           |||| ||||| ||||||||||||||||| ||  |||||||||| |||||||| || || |
Sbjct: 454 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 395

                                             
Query: 373 gaactgggacaccattgatcttgaaaggtccagt 406
             |  || ||||||||||||||||| ||||||||
Sbjct: 394 tcagaggaacaccattgatcttgaatggtccagt 361

---

>ref|NM_106064.2| Arabidopsis thaliana structural constituent of ribosome AT1G74050
           mRNA, complete cds
          Length = 1035

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 575 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 516

                                        
Query: 378 gggacaccattgatcttgaaaggtccagt 406
           || ||||||||||||||||| ||||||||
Sbjct: 515 ggaacaccattgatcttgaatggtccagt 487

---

>ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 structural
           constituent of ribosome (CNE03060) partial mRNA
          Length = 764

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 315 acaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcga 374
           ||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||| || |||
Sbjct: 480 acaccggagatgtcgaccttggtggaagtggcaatgacataggcctggctcactcgacga 421

                                
Query: 375 actgggacaccattgatcttg 395
           |  |||||||| |||| ||||
Sbjct: 420 agagggacaccgttgagcttg 400

---

>gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050)
           mRNA, complete cds
          Length = 891

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 449 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 390

                                        
Query: 378 gggacaccattgatcttgaaaggtccagt 406
           || ||||||||||||||||| ||||||||
Sbjct: 389 ggaacaccattgatcttgaatggtccagt 361

---

>gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050)
           mRNA, complete cds
          Length = 960

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 501 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 442

                                        
Query: 378 gggacaccattgatcttgaaaggtccagt 406
           || ||||||||||||||||| ||||||||
Sbjct: 441 ggaacaccattgatcttgaatggtccagt 413

---

>gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050;
           F2P9.8) mRNA, complete cds
          Length = 892

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 505 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 446

                                        
Query: 378 gggacaccattgatcttgaaaggtccagt 406
           || ||||||||||||||||| ||||||||
Sbjct: 445 ggaacaccattgatcttgaatggtccagt 417

---

>gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete sequence
          Length = 985

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 575 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 516

                                        
Query: 378 gggacaccattgatcttgaaaggtccagt 406
           || ||||||||||||||||| ||||||||
Sbjct: 515 ggaacaccattgatcttgaatggtccagt 487

---

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                          
Query: 315    acaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcga 374
              ||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||| || |||
Sbjct: 868852 acaccggagatgtcgaccttggtggaagtggcaatgacataggcctggctcactcgacga 868793

                              
Query: 375    actgggacaccattga 390
              |  |||||||| ||||
Sbjct: 868792 agagggacaccgttga 868777

---

>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete
             sequence
          Length = 108387

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                         
Query: 313   taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggc 372
             |||| ||||| ||||||||||||||||| ||  |||||||||| |||||||| || || |
Sbjct: 22757 taactccagaaatgtcaacctttgtggaagtaccaatgacataggcctggttaacacgtc 22698

                                            
Query: 373   gaactgggacaccattgatcttgaaaggtcc 403
               |  || ||||||||||||||||| |||||
Sbjct: 22697 tcagaggaacaccattgatcttgaatggtcc 22667



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 318   ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
             ||||| ||||||||||||||||| ||| |||| ||||| |||||||| || || |  |  
Sbjct: 25490 ccagaaatgtcaacctttgtggaagtgccaatcacataggcctggttaacacgtctcaaa 25431

                                       
Query: 378   gggacaccattgatcttgaaaggtcc 403
             || ||||||||||||||||| |||||
Sbjct: 25430 ggaacaccattgatcttgaatggtcc 25405

---

>emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB57ZF05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 313 taacaccagagatgtcaacctttgtggatgtggcaatgacataagcctggtt 364
           |||| ||||| ||||||||||||||||| ||| |||| ||||| ||||||||
Sbjct: 63  taactccagaaatgtcaacctttgtggaagtgccaatcacataggcctggtt 12

---

>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
          Length = 93173

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                       
Query: 284 aaagtacttgtcatcaaacttctccaccttaacaccagagatgtcaacctttgtggatgt 343
           |||||||||||||||||  || ||||| |||||||| ||||| || || || || |||||
Sbjct: 486 aaagtacttgtcatcaaggttatccacattaacaccggagatatcgactttggttgatgt 427

                                   
Query: 344 ggcaatgacataagcctggttcac 367
             |||| ||||| ||||| |||||
Sbjct: 426 accaatcacataggcctgattcac 403

---

>dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal protein L6 CgRPL6,
           partial cds
          Length = 609

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 423 gacttgagctgcttgaggaacaccacgcgctt 454
           |||| ||||||||||||||| |||||||||||
Sbjct: 224 gactcgagctgcttgaggaataccacgcgctt 193

---

>gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccagagatgtcaacctttgtggatgtggcaatgacataagcctggttcacccggcgaact 377
           ||||| ||||||||||||||||| ||  |||| ||||| || ||||| || || |  | |
Sbjct: 477 ccagaaatgtcaacctttgtggaggttccaatcacataggcttggttaacacgtctcaat 418

                                     
Query: 378 gggacaccattgatcttgaaaggtcc 403
           || |||||||| |||||||| |||||
Sbjct: 417 ggaacaccattaatcttgaatggtcc 392

---

>gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosomal protein L6 mRNA,
           complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 414 agcaggccagacttgagctgcttgaggaacaccacgcgctt 454
           |||||||| | ||| |||||||| ||||||||||| |||||
Sbjct: 446 agcaggcccgtcttcagctgcttcaggaacaccacacgctt 406

---

>ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (MG01745.4) partial
           mRNA
          Length = 1389

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 cctagcaaagtacttgtcatc 298
           |||||||||||||||||||||
Sbjct: 798 cctagcaaagtacttgtcatc 778

---

>emb|BX649433.4| Zebrafish DNA sequence from clone DKEY-215P16 in linkage group 7,
             complete sequence
          Length = 77241

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 117   ccaagatagttcttaaggtca 137
             |||||||||||||||||||||
Sbjct: 51238 ccaagatagttcttaaggtca 51258

---

>emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in linkage group 7
             Contains a novel gene similar to mouse and rodent CHRNA7
             (cholinergic receptor, nicotinic, alpha polypeptide 7), a
             novel gene and two CpG islands, complete sequence
          Length = 144076

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   ccaagatagttcttaaggtca 137
             |||||||||||||||||||||
Sbjct: 62863 ccaagatagttcttaaggtca 62843

---

>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    tcttctttgccctggccttct 273
              |||||||||||||||||||||
Sbjct: 139403 tcttctttgccctggccttct 139383

---

>dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate dehydrogenase, complete
            cds
          Length = 3540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 429  agctgcttgaggaacaccacgcgcttccc 457
            |||||||||||||| ||||| ||||||||
Sbjct: 3081 agctgcttgaggaagaccacacgcttccc 3109

---

>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
              sequence
          Length = 198426

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 404    agtgatgaggagcaggccaga 424
              |||||||||||||||||||||
Sbjct: 165237 agtgatgaggagcaggccaga 165257

---

>gb|BC076927.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase), mRNA (cDNA clone
            MGC:89173 IMAGE:7016488), complete cds
          Length = 2746

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  catcaaacttctccacctta 314
            ||||||||||||||||||||
Sbjct: 1513 catcaaacttctccacctta 1494

---

>gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 acctttgtggatgtggcaat 349
           ||||||||||||||||||||
Sbjct: 636 acctttgtggatgtggcaat 617

---

>gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 959

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 acctttgtggatgtggcaat 349
           ||||||||||||||||||||
Sbjct: 646 acctttgtggatgtggcaat 627

---

>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete
             sequence
          Length = 214489

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   agtgatgaggagcaggccag 423
             ||||||||||||||||||||
Sbjct: 40024 agtgatgaggagcaggccag 40005

---

>ref|XM_591972.2| PREDICTED: Bos taurus similar to Sodium/hydrogen exchanger 2
           (Na(+)/H(+) exchanger 2) (NHE-2) (Solute carrier family
           9 member 2) (H7) (LOC514166), partial mRNA
          Length = 959

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 gtacttgtcatcaaacttct 306
           ||||||||||||||||||||
Sbjct: 25  gtacttgtcatcaaacttct 6

---

>ref|XM_716459.1| Candida albicans SC5314 putative 26S proteasome regulatory particle
            subunit Rpn3p (CaO19_3054), mRNA
          Length = 1446

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  gtcatcctttttgaagtcag 204
            ||||||||||||||||||||
Sbjct: 1020 gtcatcctttttgaagtcag 1001

---

>ref|XM_716188.1| Candida albicans SC5314 putative 26S proteasome regulatory particle
            subunit Rpn3p (CaO19_10572), mRNA
          Length = 1446

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  gtcatcctttttgaagtcag 204
            ||||||||||||||||||||
Sbjct: 1020 gtcatcctttttgaagtcag 1001

---

>ref|XM_752221.1| Ustilago maydis 521 hypothetical protein (UM01167.1) partial mRNA
          Length = 3945

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agaaggtcatctcatggggc 86
            ||||||||||||||||||||
Sbjct: 2466 agaaggtcatctcatggggc 2485

---

>ref|XM_533873.2| PREDICTED: Canis familiaris similar to peptidylprolyl isomerase A
           isoform 1 (LOC609903), mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 285 aagtacttgtcatcaaacttctcc 308
           |||| |||||||||||||||||||
Sbjct: 286 aagttcttgtcatcaaacttctcc 263

---

>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete
             sequence
          Length = 211919

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   agtgatgaggagcaggccag 423
             ||||||||||||||||||||
Sbjct: 71898 agtgatgaggagcaggccag 71917

---

>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence
          Length = 214405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    atggccttctggtcatcctt 193
              ||||||||||||||||||||
Sbjct: 125642 atggccttctggtcatcctt 125623

---

>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   aagtacttgtcatcaaactt 304
             ||||||||||||||||||||
Sbjct: 68034 aagtacttgtcatcaaactt 68015

---

>gb|AF517879.1| Griffithsia japonica isolate Gj550 ribosome protein L6 mRNA,
           complete cds
          Length = 764

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 429 agctgcttgaggaacaccacgcgc 452
           ||||||||||||| ||||||||||
Sbjct: 329 agctgcttgaggaccaccacgcgc 306

---

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     cttgatcaactcagcatcaa 174
               ||||||||||||||||||||
Sbjct: 3482500 cttgatcaactcagcatcaa 3482519

---

>gb|AY831461.1| Pseudomonas putida plasmid pKW1 putative porin gene, partial cds;
            ORF2 gene, complete cds; meta operon, complete sequence;
            and ORF3, and ORF4 genes, complete cds
          Length = 9632

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 343  tggcaatgacataagcctggttca 366
            |||||||| |||||||||||||||
Sbjct: 5022 tggcaatggcataagcctggttca 5045

---

>ref|NM_001006842.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase) (mmp9), mRNA
          Length = 2746

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  catcaaacttctccacctta 314
            ||||||||||||||||||||
Sbjct: 1513 catcaaacttctccacctta 1494

---

>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
             flanking regions
          Length = 116831

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ccagtgatgaggagcaggcc 421
             ||||||||||||||||||||
Sbjct: 39372 ccagtgatgaggagcaggcc 39353

---

>emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on chromosome 11 Contains two
             novel genes (4930452L02Rik and B430319H21Rik), the 3' end
             of the gene for a novel protein (1700019I23Rik), the gene
             for a novel protein (4933407G07Rik), the Pmp22 gene for
             peripheral myelin protein and a CpG island, complete
             sequence
          Length = 219468

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   agtgatgaggagcaggccag 423
             ||||||||||||||||||||
Sbjct: 90411 agtgatgaggagcaggccag 90430

---

>gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA
          Length = 624

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 282 gcaaagtacttgtcatcaaacttctcca 309
           |||||||||||||| ||| |||||||||
Sbjct: 560 gcaaagtacttgtcgtcatacttctcca 533

---

>dbj|AB226127.1| Aspergillus oryzae cDNA, contig sequence: AoEST2984
          Length = 929

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  tcatctcatggggcttgtcaccgt 96
           ||||||| ||||||||||||||||
Sbjct: 658 tcatctcgtggggcttgtcaccgt 635

---

>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     tcatctcatggggcttgtcaccgt 96
              ||||||| ||||||||||||||||
Sbjct: 769646 tcatctcgtggggcttgtcaccgt 769669

---

>gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 141266

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aaagtacttgtcatcaaact 303
             ||||||||||||||||||||
Sbjct: 99726 aaagtacttgtcatcaaact 99707

---

>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence
          Length = 189979

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ggtcatctcatggggcttgt 90
             ||||||||||||||||||||
Sbjct: 31984 ggtcatctcatggggcttgt 31965

---

>gb|AC078927.20| Homo sapiens 12 BAC RP11-745O10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125777

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tcatctcatggggcttgtca 92
              ||||||||||||||||||||
Sbjct: 108030 tcatctcatggggcttgtca 108049

---

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    tcttctttgccctggccttc 272
              ||||||||||||||||||||
Sbjct: 381469 tcttctttgccctggccttc 381488

---

>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete
              sequence
          Length = 122522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    tgagctgcttgaggaacaccacgc 450
              |||||||| |||||||||||||||
Sbjct: 100732 tgagctgcctgaggaacaccacgc 100709

---

>gb|U93491.1|MUU93491 Meriones unguiculatus NHE-2 mRNA, partial cds
          Length = 317

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 gtacttgtcatcaaacttct 306
           ||||||||||||||||||||
Sbjct: 83  gtacttgtcatcaaacttct 64


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,232,354
Number of Sequences: 3902068
Number of extensions: 4232354
Number of successful extensions: 90003
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 89802
Number of HSP's gapped (non-prelim): 190
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---