ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5n04 |
|---|---|
| Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 103 bits (258), Expect = 3e-22 Identities = 45/90 (50%), Positives = 61/90 (67%) Frame = -3 Query: 619 VDVKALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRY 440 V+ +A + P ++A + NRCS CRKRVGLTGF CRCG+++C HRY Sbjct: 72 VEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRY 131 Query: 439 SDKHDCQFDYRTAARDAIAKANPVVKAEKL 350 SD+H C +DY++AARDAIA+ NPVV+A K+ Sbjct: 132 SDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 101 bits (252), Expect = 2e-21 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%) Frame = -3 Query: 604 LVVQPAADVA--GTSEAVAVSPKR-KEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRYSD 434 +V QP+ V+ TS++ +P+ K NRC CRK+VGLTGF+CRCGN++C LHRYSD Sbjct: 123 VVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSD 182 Query: 433 KHDCQFDYRTAARDAIAKANPVVKAEKLDKI 341 KH+C +DY+ A I K NPVV AEK+ +I Sbjct: 183 KHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 100 bits (249), Expect = 3e-21 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 5/93 (5%) Frame = -3 Query: 604 LVVQPAADVAGTS-----EAVAVSPKRKEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRY 440 +V QP+ V+ S E PK K+ NRC CRK+VGLTGF+CRCGN++C LHRY Sbjct: 123 VVTQPSPSVSQPSSSQSEEKAPELPKPKK--NRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180 Query: 439 SDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 341 SDKH+C +DY+ A I K NPVV AEK+ +I Sbjct: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 99.8 bits (247), Expect = 6e-21 Identities = 43/78 (55%), Positives = 57/78 (73%) Frame = -3 Query: 574 GTSEAVAVSPKRKEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAAR 395 G S A + P K RC +C K+VG+TGF CRCG+ +C HRY + H+CQFD++ AR Sbjct: 92 GDSAAAPLDPP-KSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAR 150 Query: 394 DAIAKANPVVKAEKLDKI 341 +AIAKANPVVKA+K+D+I Sbjct: 151 EAIAKANPVVKADKVDRI 168
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 96.3 bits (238), Expect = 7e-20 Identities = 41/69 (59%), Positives = 50/69 (72%) Frame = -3 Query: 547 PKRKEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPV 368 P + PNRC+ CRKRVGLTGF CRCG +C HRY + H C FD+++A R+ IAKANP+ Sbjct: 93 PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPL 152 Query: 367 VKAEKLDKI 341 V A KL KI Sbjct: 153 VIAAKLQKI 161
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 94.4 bits (233), Expect = 2e-19 Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Frame = -3 Query: 604 LVVQPAADVAGTSEAVAVSPKRKEGPN-RCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKH 428 +V + V +E P R PN RC +C K+VG+ GF C+CG+ +C HRY +KH Sbjct: 87 VVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKH 146 Query: 427 DCQFDYRTAARDAIAKANPVVKAEKLDKI 341 +C FD++ RDAIAKANP+VKA+K+ +I Sbjct: 147 ECSFDFKEVGRDAIAKANPLVKADKVQRI 175
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 49.3 bits (116), Expect = 9e-06 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = -3 Query: 571 TSEAVAVSPKRKEGPNRCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTA 401 T + S +++ RC C+ ++ L +CRCG ++C LHR ++HDC FD+ Sbjct: 140 TERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR 199 Query: 400 ARDAIAKANPVVKAEKLDK 344 R+ ++K KLD+ Sbjct: 200 GRE-----EAIMKMVKLDR 213
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = -3 Query: 541 RKEGPNRCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 371 +++ RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204 Query: 370 VVKAEKLDK 344 ++K KLD+ Sbjct: 205 IMKMVKLDR 213
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = -3 Query: 541 RKEGPNRCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANP 371 +++ RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 150 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EA 204 Query: 370 VVKAEKLDK 344 ++K KLD+ Sbjct: 205 IMKMVKLDR 213
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 47.4 bits (111), Expect = 3e-05 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = -3 Query: 550 SPKRKEGPNRCSTCRKRVGLTGF---NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 380 S +++ RC C+ ++ L +CRCG ++C LHR ++HDC FD+ R+ Sbjct: 146 SRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE---- 201 Query: 379 ANPVVKAEKLDK 344 ++K KLD+ Sbjct: 202 -EAIMKMVKLDR 212
>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B| Length = 257 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -3 Query: 544 KRKEGPNRC--STCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 383 KRK N+C S CR+R + RCG +C HR+ HDC + +R +A Sbjct: 92 KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 34.3 bits (77), Expect = 0.31 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -3 Query: 544 KRKEGPNRC--STCRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 383 KRK N+C S CR+R + RCG +C HR+ H+C + +R +A Sbjct: 92 KRKIFTNKCERSGCRQREMMKLTCDRCGRNFCIKHRHPLDHECSGEGHQTSRAGLA 147
>ZFN2B_HUMAN (Q8WV99) AN1-type zinc finger protein 2B| Length = 257 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -3 Query: 544 KRKEGPNRCST--CRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIA 383 KRK N+C CR+R + RC +C HR+ HDC + +R +A Sbjct: 92 KRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>NORQ_PARDE (Q51664) Protein norQ| Length = 270 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -2 Query: 353 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 243 A DL VL +G GC RF+ H+ + P + V CH Sbjct: 32 AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 30.4 bits (67), Expect = 4.4 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Frame = -3 Query: 607 ALVVQPAADVAGTSEAVAVSPKRKEGPNRCSTCRKRVG-LTGFNCRCGNMYCSLHRYSDK 431 AL+VQP A + E + V + GP RCS C+ V F + C+L Y+D+ Sbjct: 405 ALIVQPMALSHPSEEPIQVVDFGESGPVRCSRCKGYVNPFMKFIDQGRKFICNLCGYTDE 464 Query: 430 ----HDCQFDYRTAARDA 389 + C RDA Sbjct: 465 TPRDYQCNLGPDGRRRDA 482
>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent| helicase IGHMBP2) (Immunoglobulin mu-binding protein 2) (SMUBP-2) (Glial factor 1) (GF-1) Length = 993 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -3 Query: 592 PAADVAGTSEAVAVSPKRKEGPNRCSTCRKRVGLT--GFNCR-CGNMYCSLHRYSDKHDC 422 PA D+ + A+ + N C + G+T G C+ C YC H + H C Sbjct: 873 PATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGC 932 Query: 421 QFDYRTAARDAIAK 380 R AR I++ Sbjct: 933 GERARAHARQRISR 946
>CO9_MOUSE (P06683) Complement component C9 precursor| Length = 548 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -3 Query: 523 RCST--CRKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAK 380 +C T C KR L + CG+ YSD++DC D RT RD +A+ Sbjct: 104 QCETGRCIKRRLLCNGDNDCGD-------YSDENDCDDDPRTPCRDRVAE 146
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 523 RCSTCRKRVGLTGFNCRCGNMYCSLHRY 440 RCSTC+ +G T F R +MYC H Y Sbjct: 74 RCSTCKDELGATCF-LREDSMYCRAHFY 100
>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein| Length = 136 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1 Query: 357 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGS 196 RS++ F C + L ++ PS+ CT+ SCW H L +++ +RR S Sbjct: 26 RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSS 74
>DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase| 1) (DGK 1) (DAG kinase 1) Length = 1020 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = -3 Query: 523 RCSTCRKRV----GLTGFNCR-CGNMYCSLHRYSDKHDC 422 RCS CRKR+ G+TG CR C M + S K +C Sbjct: 269 RCSKCRKRIKAYHGITGLTCRWCHMMLHNRCASSVKKEC 307
>ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-)| (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase) (Asparagine-linked glycosylation protein 2) Length = 458 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -3 Query: 475 RCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI--*VSYREEMVAICQ 302 +C N Y S++RY K + + + A+ ++ N VV +I V Y +E+ +C+ Sbjct: 215 KCPNFYLSINRYERKKNIELAIQAFAKASVENTNLVVCGGYDPRIHENVQYLQELTCLCK 274
>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC| Length = 261 Score = 29.6 bits (65), Expect = 7.6 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -3 Query: 358 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 185 EKL + YR +V I S +V HLPFL+ A + G++ H + W + L Sbjct: 5 EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61 Query: 184 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 101 LS+ A + +F ++F ++I++S+ Sbjct: 62 FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101
>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)| (IL-25) Length = 177 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 310 LQPFLPCRTPKSCRASLPSPLG----WPWRW 390 L+P P R P+SCRAS PL PWR+ Sbjct: 62 LEPARPNRHPESCRASEDGPLNSRAISPWRY 92
>LRP4_RAT (Q9QYP1) Low-density lipoprotein receptor-related protein 4 precursor| (Multiple epidermal growth factor-like domains 7) Length = 1905 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = -3 Query: 586 ADVAGTSEAVAVSPKRKEGPNRCSTCRKRVGLTGFNCRCGNMYCSLHRYSDKHDC 422 A+V G + + VSP+R+ G N C F R + C+ D H C Sbjct: 1595 ANVEGLMDIIVVSPQRQTGTNACGVNNGGCSHLCF-ARASDFVCACPDEPDSHPC 1648
>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%) Frame = +3 Query: 192 CSCHDAVCITM---PYNLGNVAANKKGRCK 272 C C A I PYNL N NKK CK Sbjct: 89 CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,540,565 Number of Sequences: 219361 Number of extensions: 1981649 Number of successful extensions: 5954 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5952 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
