| Clone Name | rbags5n02 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 55.1 bits (131), Expect(2) = 2e-10 Identities = 27/75 (36%), Positives = 47/75 (62%) Frame = -1 Query: 538 CPARR*TPIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKGALAISTKIFQLTPELVMV 359 CP + II+K+EE A + F + K+ ++ E + G KG L ++T++FQ+ P L +V Sbjct: 352 CPPKE---IITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVV 408 Query: 358 QVCKKAGDTAEYRQF 314 ++ K GDT E+++F Sbjct: 409 ELKKAKGDTLEFQKF 423 Score = 30.0 bits (66), Expect(2) = 2e-10 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Frame = -3 Query: 626 SMNAFDIIASSPSFDLSGLFEERGE---QLRFVSSAP 525 SMNAF++I+ + + +L LFE + E + RF S P Sbjct: 317 SMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCP 353
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 50.8 bits (120), Expect(2) = 6e-09 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%) Frame = -1 Query: 529 RR*TPIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKGALAISTKIFQLTPELVMVQVC 350 R + II+ +E +A + F + T++ + E + G LA+ +I+++ P L MV V Sbjct: 345 REPSEIIANIEAVANSMGFKSHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVR 404 Query: 349 KKAGDTAEYRQF---CGSELKPGLRGLVDGLPEDGLPPTV 239 K AG+T EY +F S+L+ + +G+P+ + T+ Sbjct: 405 KAAGETLEYHKFYKKLCSKLENIIWRATEGIPKSEILRTI 444 Score = 28.9 bits (63), Expect(2) = 6e-09 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 4/34 (11%) Frame = -3 Query: 623 MNAFDIIASSPSFDLSGLFEERGE----QLRFVS 534 MNAF++I S +LS LF+ R + Q RFVS Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVS 343
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 39.3 bits (90), Expect(2) = 2e-08 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 2/38 (5%) Frame = -3 Query: 638 RRIKSMNAFDIIASSPSFDLSGLFE--ERGEQLRFVSS 531 +R ++NAF+II+ S FDLSGLFE E E++RF S+ Sbjct: 299 KRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSN 336 Score = 38.9 bits (89), Expect(2) = 2e-08 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%) Frame = -1 Query: 529 RR*TPIISKLEEIAGQVSFTARTKD----CQVSFEATRNGHKGALAISTKIFQLTPELVM 362 R + I KL EI + R K+ ++S EAT + ++F++ P M Sbjct: 337 REASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEAT--------VVEAEVFEIAPSYHM 388 Query: 361 VQVCKKAGDTAEYRQFCGSELKPGL 287 V + K GDTAEY++ ++P L Sbjct: 389 VVLKKSGGDTAEYKRVMKESIRPAL 413
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 38.9 bits (89), Expect(2) = 2e-05 Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = -1 Query: 514 IISKLEEIAGQVSFTARTKDCQVSFEATRNGHKG--ALAISTKIFQLTPELVMVQVCKKA 341 ++ K+E ++ F+ + K ++ + KG L+++ ++F++ P L +V++ K Sbjct: 357 LLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSY 416 Query: 340 GDTAEYRQFCGSELK 296 GD+ YRQ LK Sbjct: 417 GDSCLYRQLYERLLK 431 Score = 28.5 bits (62), Expect(2) = 2e-05 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Frame = -3 Query: 623 MNAFDIIASSPSFDLSGLFEERG---EQLRFVSSA 528 +NAF +I S DLSG FE+ ++RF S++ Sbjct: 318 INAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNS 352
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 36.6 bits (83), Expect = 0.065 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -3 Query: 641 IRRIKSMNAFDIIASSPSFDLSGLF----EERGEQLRFVS 534 + +KS+NAFD+I+ S DLSGLF GE RF+S Sbjct: 301 LEAVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLS 340
>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1273 Score = 33.1 bits (74), Expect = 0.72 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +2 Query: 323 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 478 +FS + + +L+HD+ R L +G QR VP+ R EA + G REA Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643
>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1272 Score = 33.1 bits (74), Expect = 0.72 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +2 Query: 323 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 478 +FS + + +L+HD+ R L +G QR VP+ R EA + G REA Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643
>IFRH_SOLTU (P52578) Isoflavone reductase homolog (EC 1.3.1.-) (CP100)| Length = 308 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Frame = +3 Query: 453 QSLVRAVKLTCPAISSSLEMMGVHRRAGHETQLLAALLKQPGQIEAW---RGGDDVERVH 623 +SLV+A+K IS+ +G H + +L+AA+ K+ G ++ + G+DV+RVH Sbjct: 68 ESLVKAIKQVDVVIST----VG-HALLADQVKLIAAI-KEAGNVKRFFPSEFGNDVDRVH 121 Query: 624 ALDPSYA 644 A++P+ A Sbjct: 122 AVEPAKA 128
>GLNA_GIBFU (Q9C2U9) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 353 Score = 30.8 bits (68), Expect = 3.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 287 SRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 189 +R GWPA G+P+P GE YCGV + + Sbjct: 141 NRPYGWPAGGFPAPQGE-------YYCGVGTGK 166
>ZN688_HUMAN (Q8WV14) Zinc finger protein 688| Length = 782 Score = 30.4 bits (67), Expect = 4.7 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 403 WPALPCAHFLSPRSSLGNPW 462 WP++ C F +PR S NPW Sbjct: 155 WPSVACPEFCNPRQSPMNPW 174
>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)| Length = 1401 Score = 30.4 bits (67), Expect = 4.7 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +2 Query: 251 KAILRQAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRRELEYLGGYGQRSLV 421 K +++ I T + + TA ++ + + S + YL + EY YG+RSL+ Sbjct: 1155 KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLKTKSGKFRREYKSSYGERSLL 1211
>CYSK2_BRAJU (O23735) Cysteine synthase (EC 2.5.1.47) (O-acetylserine| sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) (OAS-TL6) Length = 324 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -1 Query: 424 GHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGLRGLVDG 269 G KGA+A + +I TP M+Q + + + + G E+ G G +DG Sbjct: 126 GMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDG 177
>GLNA_COLGL (Q12613) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 360 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 290 SSRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 189 S+R GWPA G+P+P G YCGV + + Sbjct: 142 SNRPFGWPANGFPAPQGP-------YYCGVGTGK 168
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = +2 Query: 266 QAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 391 ++IHE K R +L A +L + S++ A L+H+E LR +LE+ Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEF 1565
>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +2 Query: 266 QAIHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 391 + IHE K R +L A +L + S++ A L+H+E LR +LE+ Sbjct: 1521 KTIHELEKVRKQLEAEKLELQSALEESEASLEHEEGKILRAQLEF 1565 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,912,285 Number of Sequences: 219361 Number of extensions: 1562414 Number of successful extensions: 4803 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4656 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4803 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)