Clone Information

BLAST Search Result

Clone Name	rbags5m18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC...	219	6e-57
2	PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3...	114	2e-25
3	PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC...	113	3e-25
4	PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC...	113	4e-25
5	PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC...	110	2e-24
6	PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC ...	101	1e-21
7	PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC ...	89	1e-17
8	PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Mac...	69	7e-12
9	PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3...	48	2e-05
10	PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25...	47	5e-05
11	PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25...	45	1e-04
12	PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25...	44	3e-04
13	PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25...	44	4e-04
14	PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25...	42	0.002
15	PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25...	40	0.005
16	PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25...	40	0.005
17	PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25...	39	0.011
18	PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC...	39	0.011
19	PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1)...	39	0.014
20	PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	37	0.031
21	PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	36	0.070
22	PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25...	36	0.091
23	PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	35	0.12
24	PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4....	35	0.16
25	PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	35	0.16
26	PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC...	34	0.35
27	PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC ...	34	0.35
28	PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3...	34	0.35
29	PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3...	33	0.45
30	PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC...	33	0.45
31	PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	33	0.59
32	PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1)...	33	0.77
33	PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC...	32	1.0
34	PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC ...	32	1.3
35	PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25...	32	1.7
36	PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC...	32	1.7
37	PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1)...	32	1.7
38	PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (...	32	1.7
39	PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC...	31	2.2
40	FPG_DECAR (Q479M6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2...	31	2.2
41	PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macr...	31	2.9
42	PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	31	2.9
43	PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	31	2.9
44	PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC...	31	2.9
45	AEP3_CANGA (Q6FKT1) ATPase expression protein 3	31	2.9
46	PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1...	31	2.9
47	TPIS_CLOPE (Q8XKU1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)...	31	2.9
48	CWC23_ASHGO (Q752B6) Pre-mRNA-splicing factor CWC23	31	2.9
49	METX_COREF (Q8FRT0) Homoserine O-acetyltransferase (EC 2.3.1.31)...	30	3.8
50	PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC...	30	3.8
51	ITAD_HUMAN (Q13349) Integrin alpha-D precursor (Leukointegrin al...	26	4.7
52	PSA4_PETHY (O82530) Proteasome subunit alpha type 4 (EC 3.4.25.1...	30	5.0
53	PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor ...	30	6.5
54	C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)	30	6.5
55	UVRC_BACTN (Q8A2N9) UvrABC system protein C (Protein uvrC) (Exci...	29	8.5

>PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 7) (20S proteasome beta
           subunit G-1) (Proteasome component H)
          Length = 246

 Score =  219 bits (557), Expect = 6e-57
 Identities = 101/155 (65%), Positives = 122/155 (78%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMI 401
           ND+MWDDGNSLGPKEIH YLTRVMYNRRNKF+PLWN+             + YLGMV+MI
Sbjct: 96  NDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNG----KSYLGMVSMI 151

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G  FE++H+ATGFGNH+A PILR EW  D++FE+ VKL+EKC+ VLLYRDRS+INK QIA
Sbjct: 152 GVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIA 211

Query: 220 KITTEGSTIYPPYALKTNWGFAAFENPSKGAVGTW 116
           KIT EG T+  PY+LKT W F++F NP+ GA G+W
Sbjct: 212 KITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246

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>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (RN3)
          Length = 263

 Score =  114 bits (285), Expect = 2e-25
 Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMI 401
           ++ ++ DG+S  P+ IH++LTR MY+RR+K +PLWN+             E +LG V+M+
Sbjct: 117 DEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGG----ESFLGYVDML 172

Query: 400 GTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 227
           G  +E   +ATG+G ++A P+LR   E +  ++  EA +L+E+C+ VL YRD  S N+FQ
Sbjct: 173 GVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQ 232

Query: 226 IAKITTEGSTIYPPYALKTNWGFA 155
           +A +T +G  I  P + +TNW  A
Sbjct: 233 VATVTEKGVEIEGPLSAQTNWDIA 256

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>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3)
          Length = 264

 Score =  113 bits (283), Expect = 3e-25
 Identities = 58/144 (40%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMI 401
           ++ +  DG+S  P+ IH++LTR MY+RR+K +PLWN+             E +LG V+M+
Sbjct: 118 DEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADG----ESFLGYVDML 173

Query: 400 GTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 227
           G  +E   +ATG+G ++A P+LR   E +  ++  EA +L+E+C+ VL YRD  S N+FQ
Sbjct: 174 GVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQ 233

Query: 226 IAKITTEGSTIYPPYALKTNWGFA 155
           IA +T +G  I  P + +TNW  A
Sbjct: 234 IATVTEKGVEIEGPLSAQTNWDIA 257

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>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 242

 Score =  113 bits (282), Expect = 4e-25
 Identities = 58/144 (40%), Positives = 89/144 (61%), Gaps = 2/144 (1%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMI 401
           ++ +  DG++  PK IH++LTRVMYNRR+K +PLWN+             E +LG V+ +
Sbjct: 96  DEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNT----VVIGGFYNGESFLGYVDKL 151

Query: 400 GTHFEENHIATGFGNHMAIPILR--GEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 227
           G  +E   IATGFG ++A P+LR   E +  ++ EEA +L+++C+ VL YRD  S N+F+
Sbjct: 152 GVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFE 211

Query: 226 IAKITTEGSTIYPPYALKTNWGFA 155
           I  +T  G  +  P + +TNW  A
Sbjct: 212 ITTVTESGVEVEGPLSSETNWEIA 235

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>PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (HSN3) (HsBPROS26)
          Length = 264

 Score =  110 bits (276), Expect = 2e-24
 Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMI 401
           ++ +  DG+S  P+ IH++LTR MY+RR+K +PLWN+             E +LG V+M+
Sbjct: 118 DEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADG----ESFLGYVDML 173

Query: 400 GTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 227
           G  +E   +ATG+G ++A P+LR   E +  ++  EA  L+E+C+ VL YRD  S N+FQ
Sbjct: 174 GVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQ 233

Query: 226 IAKITTEGSTIYPPYALKTNWGFA 155
            A +T +G  I  P + +TNW  A
Sbjct: 234 TATVTEKGVEIEGPLSTETNWDIA 257

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>PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC 3.4.25.1)|
          Length = 262

 Score =  101 bits (252), Expect = 1e-21
 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
 Frame = -1

Query: 568 WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMIGTHF 389
           + DG +L P  IH YL++V+Y RRNK DP WN              E Y+   ++ GT +
Sbjct: 112 YGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENK--EPYVAFADLRGTTY 169

Query: 388 EENHIATGFGNHMAIPILRGEWRED----MTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
               IATGF  H+A+P+LR    +D    ++ E A   I++C+ VL YRD  S+NKF +A
Sbjct: 170 SAPAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSLNKFSVA 229

Query: 220 KITTEGSTIYPPYALKTNWGFA 155
            IT EG       ++ + W FA
Sbjct: 230 TITPEGIEFQTDQSVSSKWAFA 251

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>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)|
          Length = 268

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
 Frame = -1

Query: 577 DHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMIG 398
           D   DD   + PK + +++TRV+YNRR++ +PL+                 YL  V++ G
Sbjct: 123 DQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGT---PYLANVDLRG 179

Query: 397 THFEENHIATGFGNHMAIPILRGEWREDMTFE--EAVKLIEKCLLVLLYRDRSSINKFQI 224
             +E+  +ATGF  H+A+P++R +  +D  F   EA +LI  C+ VL YRD  +I+++ +
Sbjct: 180 RSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTV 239

Query: 223 AKITTEGSTIYPPYALKTNWGFA 155
              +  G  +  P+ +  NW FA
Sbjct: 240 GVCSVNGCGVEGPFQVNENWTFA 262

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>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit|
           PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic
           endopeptidase complex subunit PRE4)
          Length = 266

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
 Frame = -1

Query: 565 DDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXGDEKYLGMVNMIGTHFE 386
           D   +L P  I  YL  VMY RR+K +PLWN+             +++L  VN++G  + 
Sbjct: 115 DAEEALEPSYIFEYLATVMYQRRSKMNPLWNA---IIVAGVQSNGDQFLRYVNLLGVTYS 171

Query: 385 ENHIATGFGNHMAIPILRG--EWREDM---TFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
              +ATGFG HMA P+LR   +   D+   T + A + I   + VL YRD  S   F +A
Sbjct: 172 SPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLA 231

Query: 220 KI 215
            I
Sbjct: 232 II 233

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>PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 154

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -1

Query: 580 NDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNS 470
           ++ +  DG+S  PK IH++LTR MYNRR K +PLW +
Sbjct: 118 DEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154

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>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 206

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -1

Query: 433 DEK-YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 257
           DEK  L  V+M+G   E+N+ A G G   A  IL  E+RE+M+  + +KL  K + V + 
Sbjct: 115 DEKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIK 174

Query: 256 RDRSSINKFQIAKITTEGSTIY 191
           RD  + +   +  IT +G   Y
Sbjct: 175 RDVFTGDGLLVVTITKDGYKEY 196

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>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 208

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 44/77 (57%)
 Frame = -1

Query: 433 DEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYR 254
           D+  L  ++ +G   EEN++ATG G+ +A+ +L  E+   MT +EA  L ++ +   + R
Sbjct: 120 DQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKR 179

Query: 253 DRSSINKFQIAKITTEG 203
           D  +     +AKI ++G
Sbjct: 180 DSFTGTGVIVAKIHSKG 196

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>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = -1

Query: 433 DEK-YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 257
           DEK  L  V+M+G   E+ +   G G   A  IL  E+++++T EE +KL  K +   + 
Sbjct: 115 DEKPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIK 174

Query: 256 RDRSSINKFQIAKITTEG 203
           RD  S +   +  IT EG
Sbjct: 175 RDVFSGDGILVVTITKEG 192

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>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = -1

Query: 433 DEK-YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 257
           DEK  L  V+M+G   E+ ++A G G   A  +L  E+RED+   E +K+  + +   + 
Sbjct: 115 DEKPRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIK 174

Query: 256 RDRSSINKFQIAKITTEG 203
           RD  S +   +  IT EG
Sbjct: 175 RDVFSGDGIMVVTITEEG 192

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>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 224

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G + E+   ATG G+ +A  +L   +  DM+ EE +KL    L   + RD  S N   +A
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLA 185

Query: 220 KITTEGSTIY 191
            IT +G  I+
Sbjct: 186 VITKDGVKIF 195

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>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome|
           subunit beta type 4) (20S proteasome beta subunit D-2)
           (Proteasome component GA)
          Length = 199

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 20/74 (27%), Positives = 42/74 (56%)
 Frame = -1

Query: 412 VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 233
           ++ I T  + +  A G+G++ ++  +   +R DM+ EEA++L++KC+L +  R   +   
Sbjct: 117 IDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPN 176

Query: 232 FQIAKITTEGSTIY 191
           F I  +  +G+  Y
Sbjct: 177 FVIKIVDKDGAREY 190

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>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome|
           subunit beta type 4) (20S proteasome beta subunit D-1)
           (Proteasome component GB)
          Length = 204

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 20/74 (27%), Positives = 42/74 (56%)
 Frame = -1

Query: 412 VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 233
           ++ I T  + +  A G+G++ ++  +   +R DM+ EEA++L++KC+L +  R   +   
Sbjct: 117 IDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPN 176

Query: 232 FQIAKITTEGSTIY 191
           F I  +  +G+  Y
Sbjct: 177 FVIKIVDKDGARDY 190

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>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 210

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = -1

Query: 412 VNMIGTHFEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 236
           ++ +G   EE  I ATG G+ MA  +L  ++RE+MT +E + L  + +     RD +S  
Sbjct: 123 LDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGE 182

Query: 235 KFQIAKITTEGSTIYPPYALKT 170
              +  IT E      P  +K+
Sbjct: 183 NIDVVVITKEAFKRLDPEEVKS 204

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>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 27/66 (40%), Positives = 35/66 (53%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           GT+F     A G G+  A   L  E+ +DMT EEA  LI K L  ++     S N  Q+A
Sbjct: 161 GTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKN-VQLA 219

Query: 220 KITTEG 203
           K+T EG
Sbjct: 220 KVTAEG 225

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>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S|
           proteasome alpha subunit D) (20S proteasome subunit
           beta-4)
          Length = 212

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 21/74 (28%), Positives = 39/74 (52%)
 Frame = -1

Query: 412 VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 233
           ++ I T  +    A G+G++  + ++   +R DM+ EEAV L++KC+  +  R   +   
Sbjct: 117 IDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQN 176

Query: 232 FQIAKITTEGSTIY 191
           F I  +  EG+  Y
Sbjct: 177 FIIKIVDKEGAREY 190

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>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G +F    +A G G + A+ I   ++R+DMT +EA+KL    L   +  ++ S    ++A
Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSAENIEVA 213

Query: 220 KITTE 206
            IT +
Sbjct: 214 VITVK 218

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>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G   E    A G G   A+ +   E+REDMT +EA++L  + L     R+ ++ +  +IA
Sbjct: 157 GALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYE-ASREETTADNLEIA 215

Query: 220 KITTEG 203
            +  +G
Sbjct: 216 VVDKQG 221

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>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 213

 Score = 35.8 bits (81), Expect = 0.091
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = -1

Query: 427 KYLGMVNMIGTHFEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRD 251
           K +  ++ IG   EE  I ATG G+  A  +L   +  ++  +EAV+L  + +   + RD
Sbjct: 120 KSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRD 179

Query: 250 RSSINKFQIAKITTEGSTIYPP 185
            +S +   + KIT +    Y P
Sbjct: 180 SASGDGIDVVKITEDEFYQYSP 201

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>PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G +F    +A G G + A+ I   ++R+DM  E+A+KL    L   +  +  S +  ++A
Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTM--ENPSADNIEVA 213

Query: 220 KITTE 206
            IT +
Sbjct: 214 VITVK 218

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>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)|
           (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1)
           (Multicatalytic endopeptidase complex subunit PUP1)
          Length = 261

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -1

Query: 379 HIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 242
           +++ G G+  A+ +L   W++D+T EEA+KL    +   ++ D  S
Sbjct: 153 YLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGS 198

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>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G +F    +A G G + A+ I   ++++DM+ EEA+KL    L   +  ++ S    ++A
Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVA 213

Query: 220 KITTE 206
            IT +
Sbjct: 214 IITVK 218

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>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 1) (20S proteasome beta
           subunit A-1) (Proteasome component CD)
          Length = 233

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           GT  E+     G G+          W+++MT EEA +L+ K + + + RD +S    +  
Sbjct: 130 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 189

Query: 220 KITTEGST--IYP 188
            I +EG T   YP
Sbjct: 190 IINSEGVTRNFYP 202

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>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 210

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = -1

Query: 421 LGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 242
           L  ++  G     NH   G+G+     IL+  W   ++ E+A  L++KC+L +  R   +
Sbjct: 117 LHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIIN 176

Query: 241 INKFQIAKITTEG 203
              F++  + ++G
Sbjct: 177 QRNFEVYVVDSKG 189

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>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = -1

Query: 379 HIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGS 200
           ++  G G+  A+ +   ++R DM  EEA KL+ + +   ++ D  S +   +  I+    
Sbjct: 167 YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKL 226

Query: 199 TIYPPYALKTNWG 161
               PY++    G
Sbjct: 227 DFLRPYSVPNKKG 239

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>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS---INKF 230
           GT       +TG GN  A  ++   +R+D++ EEA  L  + ++   +RD  S   +N +
Sbjct: 190 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMY 249

Query: 229 QIAK 218
            + K
Sbjct: 250 HMKK 253

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>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Tobacco cryptogein-induced
           protein 7) (tcI 7)
          Length = 234

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           GT  E+     G G+          W+E MT EEA KL+   + + + RD +S    +  
Sbjct: 131 GTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTV 190

Query: 220 KITTEGST 197
            I  +G+T
Sbjct: 191 TINKDGAT 198

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>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 258

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 260
           G +F    IA G G  +A  +    +R DM+ EEA KL  K L  ++
Sbjct: 160 GQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAII 206

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>PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome|
           subunit beta 4)
          Length = 199

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -1

Query: 433 DEKYLGMVNMIGTHF-EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 257
           D+ +LG V+ +     ++ ++  GF       I+  E+++DMT  E + L+ KC+     
Sbjct: 113 DKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKR 172

Query: 256 RDRSSINKFQIAKITTEG 203
           R  ++I  +++  I  +G
Sbjct: 173 RFVANIPGYKVVIIDKKG 190

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>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/73 (21%), Positives = 34/73 (46%)
 Frame = -1

Query: 379 HIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGS 200
           ++  G G+  A+ +   ++R DM  EEA KL+ + +   ++ D  S +   +  I+    
Sbjct: 167 YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKL 226

Query: 199 TIYPPYALKTNWG 161
               P+++    G
Sbjct: 227 DFLRPFSVPNKKG 239

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>PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC 3.4.25.1)|
          Length = 224

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -1

Query: 424 YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 272
           +L  ++ +GT     + A G G ++++  +   W EDM  +E V L+ KC+
Sbjct: 115 HLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCI 165

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>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 210

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G    +  ++TG G+ +A  +L   + +++  +EAV +  + +   + RD  S N   +A
Sbjct: 127 GGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVA 186

Query: 220 KITTE 206
            +T E
Sbjct: 187 TVTEE 191

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>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/73 (21%), Positives = 32/73 (43%)
 Frame = -1

Query: 379 HIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGS 200
           ++  G G+  A+ +   ++R DM  EEA  L+ + +   ++ D  S +   +  I+    
Sbjct: 167 YVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKL 226

Query: 199 TIYPPYALKTNWG 161
               PY +    G
Sbjct: 227 DFLRPYTVPNKKG 239

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>PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S|
           proteasome subunit beta-4)
          Length = 206

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = -1

Query: 424 YLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRS 245
           +L  ++ +GT  E  +   G+G      +L   WR ++T +E V+L++KC   +  R   
Sbjct: 125 HLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVVV 184

Query: 244 SINKFQIAKITTEG 203
           S N F    +  +G
Sbjct: 185 SNNTFICKAVPKDG 198

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>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome|
           component C13) (Macropain subunit C13) (Multicatalytic
           endopeptidase complex subunit C13) (Fragment)
          Length = 104

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -1

Query: 433 DEKYLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 260
           D+K  G+  V+  GT    N  +TG GN  A  ++    R D++ EEA  L  + ++   
Sbjct: 42  DKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHAT 101

Query: 259 YRD 251
           +RD
Sbjct: 102 HRD 104

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>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 242
           GT       +TG GN  A  ++   +R+D++ EEA  L  + +    +RD  S
Sbjct: 190 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYS 242

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>FPG_DECAR (Q479M6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 276

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 270 SKHFSMSLTASSKVMSSRHSPRRIGIAIWFPNPVAM*FSSKCVPIMLT 413
           +KH    L  + +++     PRR G+ +W P P A   S++C P++ T
Sbjct: 92  AKHDHFELVLAGQILRFA-DPRRFGVVLWQPGPPA---SAECHPLLAT 135

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>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit|
           C11) (Proteinase YSCE subunit 11) (Multicatalytic
           endopeptidase complex subunit C11)
          Length = 198

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 421 LGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 272
           L  ++ +GT  E  + A G+       +L   +R DMT EE + L++ C+
Sbjct: 116 LYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCV 165

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>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G +FE   +A G G + A+ I    +R+D+  ++A+KL    L   L  +  +    ++A
Sbjct: 156 GAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTAEGIEVA 213

Query: 220 KITTE 206
            IT +
Sbjct: 214 YITMD 218

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>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G +FE   +A G G + A+ I    +R+D+  ++A+KL    L   L  +  +    ++A
Sbjct: 156 GAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTAEGIEVA 213

Query: 220 KITTE 206
            IT +
Sbjct: 214 YITMD 218

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>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)|
           (20S proteasome subunit E) (Proteasome epsilon chain)
          Length = 272

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = -1

Query: 412 VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 233
           V+  G   +    + G G+  A  +L   ++ DMT EEA +L  + +    YRD +S   
Sbjct: 169 VDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGV 228

Query: 232 FQIAKITTEG 203
             +  +  +G
Sbjct: 229 VSVYHVGPDG 238

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>AEP3_CANGA (Q6FKT1) ATPase expression protein 3|
          Length = 623

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 248 SVTVQQDKQALLNELNSFFKSHVLTPFTTKDWDCHMVPKSSGNVILLKVC 397
           S + +++K  LLN+LN+F     L  FTTK W        +GN  + K+C
Sbjct: 503 SSSCEKNKTELLNKLNNFSWGKQLPLFTTKVW-------KNGNSEVRKIC 545

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>PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3) (Proteasome 27 kDa subunit)
          Length = 250

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = -1

Query: 373 ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 215
           A G  N  A  +L+ ++++D+T E+AVKL  K L   +     +  K ++A++
Sbjct: 163 AIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215

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>TPIS_CLOPE (Q8XKU1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 248

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 352 MAIPILRGEWREDMTFEEAVKLIEK 278
           M  PI+ G W+   T +EAVKL+E+
Sbjct: 1   MRTPIIAGNWKMHYTIDEAVKLVEE 25

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>CWC23_ASHGO (Q752B6) Pre-mRNA-splicing factor CWC23|
          Length = 273

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = -1

Query: 355 HMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK-------FQIAKI 215
           H+ IP   G+WR + +      L+E C L LL R  S+ N        FQ AK+
Sbjct: 137 HLRIPY--GDWRPNTSISRDSTLVETCTLRLLLRQNSTTNSKSSMLQLFQRAKL 188

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>METX_COREF (Q8FRT0) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 377

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 466 PGSSIEGQTYCACCTLLLSGRHGFPWGPMSSH 561
           PG +I+   YC  CT +L G +G   GP S H
Sbjct: 72  PGKAIDTDLYCVICTNVLGGCNG-STGPSSQH 102

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>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)|
           (Proteasome component C13) (Macropain subunit C13)
           (Multicatalytic endopeptidase complex subunit C13)
          Length = 276

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -1

Query: 433 DEKYLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 260
           D+K  G+  V+  GT    N  +TG GN  A  ++   +R +++ EEA  L  + +    
Sbjct: 177 DKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 236

Query: 259 YRDRSS 242
           +RD  S
Sbjct: 237 HRDSYS 242

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>ITAD_HUMAN (Q13349) Integrin alpha-D precursor (Leukointegrin alpha D) (ADB2)|
           (CD11d antigen)
          Length = 1162

 Score = 26.2 bits (56), Expect(2) = 4.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 346 LPYGSQIQWQCDS 384
           LP G ++QWQCD+
Sbjct: 496 LPRGQRVQWQCDA 508



 Score = 22.3 bits (46), Expect(2) = 4.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 505 CTLLLSGRHGFPWG 546
           C  +L G  G PWG
Sbjct: 506 CDAVLRGEQGHPWG 519

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>PSA4_PETHY (O82530) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3)
          Length = 249

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = -1

Query: 373 ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 215
           A G  N  A  +L+ ++++D+T EEAV+L  K L   +     +  K ++A++
Sbjct: 163 AIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215

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>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)|
           (20S proteasome beta subunit E-1) (Proteasome epsilon-1
           chain) (Proteasome component E)
          Length = 274

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           G   + +  + G G+  A  +L   ++ DM+ EEA +L  + +    +RD +S     + 
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234

Query: 220 KITTEGST 197
            +  EG T
Sbjct: 235 HVGPEGWT 242

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>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)|
          Length = 576

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -1

Query: 400 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 221
           GT FE  H +T +  +  IP+ R        F++ +K+I  CL  L+   + S  +  + 
Sbjct: 252 GTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVE 311

Query: 220 KI 215
           K+
Sbjct: 312 KL 313

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>UVRC_BACTN (Q8A2N9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 609

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 328 EWREDMTFEEAVKLIEKCLLVLLYRDRSSI 239
           E   +M FEEA K+ EK LL+  YR +S +
Sbjct: 226 ELANEMKFEEAQKIKEKYLLIENYRSKSEV 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,306,376
Number of Sequences: 219361
Number of extensions: 1885412
Number of successful extensions: 5164
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 4989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5150
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result