Clone Information

BLAST Search Result

Clone Name	rbags6b11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_470957.1\| Oryza sativa (japonica cultivar-group), predic...	297	2e-77
2	dbj\|AK101740.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	297	2e-77
3	gb\|AY110504.1\| Zea mays CL32751_-1 mRNA sequence	214	3e-52
4	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	115	2e-22
5	emb\|AL606442.3\|OSJN00014 Oryza sativa genomic DNA, chromosome 4,...	115	2e-22
6	gb\|BT013470.1\| Lycopersicon esculentum clone 132131F, mRNA sequence	58	4e-05
7	gb\|AC130800.23\| Medicago truncatula clone mth2-36b7, complete se...	56	2e-04
8	gb\|DQ091761.1\| Medicago truncatula N-acylethanolamine amidohydro...	56	2e-04
9	gb\|AC148396.3\| Medicago truncatula chromosome 2 BAC clone mth2-1...	56	2e-04
10	gb\|BT013475.1\| Lycopersicon esculentum clone 132142R, mRNA sequence	52	0.002
11	gb\|AC027273.5\| Homo sapiens BAC clone RP11-764F10 from 4, comple...	46	0.15
12	emb\|BX649301.3\| Zebrafish DNA sequence from clone DKEY-208D13 in...	44	0.58
13	emb\|AJ235273.1\|RPXX04 Rickettsia prowazekii strain Madrid E, com...	42	2.3
14	emb\|BX548026.10\| Zebrafish DNA sequence from clone CH211-193D9, ...	42	2.3
15	emb\|AL157957.4\|CNS01RGF Human chromosome 14 DNA sequence BAC R-9...	42	2.3
16	emb\|AL672073.8\| Mouse DNA sequence from clone RP23-333P16 on chr...	42	2.3
17	dbj\|AP004938.1\| Lotus japonicus genomic DNA, chromosome 5, clone...	42	2.3
18	gb\|U14334.1\|RPU14334 Rickettsia prowazekii citrate synthase (glt...	42	2.3
19	gb\|AC166159.2\| Mus musculus BAC clone RP24-129B16 from chromosom...	40	9.0
20	gb\|AC122791.13\| Mus musculus chromosome 13, clone RP24-266G22, c...	40	9.0
21	gb\|AC147377.4\| Mus musculus BAC clone RP23-156K23 from chromosom...	40	9.0
22	ref\|NM_001007822.1\| Gallus gallus baculoviral IAP repeat-contain...	40	9.0
23	gb\|AC131106.4\| Mus musculus chromosome 15 clone RP23-301M20, com...	40	9.0
24	gb\|AC160540.7\| Mus musculus chromosome 7, clone RP23-44O19, comp...	40	9.0
25	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	40	9.0
26	emb\|Z73906.1\|CED2030 Caenorhabditis elegans Cosmid D2030, comple...	40	9.0
27	gb\|AC132249.3\| Mus musculus BAC clone RP24-434O21 from chromosom...	40	9.0
28	gb\|AC122911.4\| Mus musculus BAC clone RP23-60K16 from 8, complet...	40	9.0
29	gb\|AC122818.4\| Mus musculus BAC clone RP23-243O16 from 17, compl...	40	9.0
30	gb\|AC125208.2\| Mus musculus BAC clone RP23-183I4 from 6, complet...	40	9.0
31	gb\|AC164426.5\| Mus musculus BAC clone RP24-320I19 from chromosom...	40	9.0
32	emb\|CR391920.11\| Zebrafish DNA sequence from clone CH211-213B7 i...	40	9.0
33	emb\|CR936441.6\| Mouse DNA sequence from clone RP23-285D5 on chro...	40	9.0
34	emb\|AL713873.11\| Human DNA sequence from clone RP11-10L1 on chro...	40	9.0
35	emb\|AL138927.14\| Human DNA sequence from clone RP11-184F4 on chr...	40	9.0
36	emb\|AL031651.33\|HS1054A22 Human DNA sequence from clone RP5-1054...	40	9.0
37	gb\|AC137930.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.0
38	emb\|BX842653.1\| Bdellovibrio bacteriovorus complete genome, stra...	40	9.0
39	emb\|AL832661.1\|HSM803971 Homo sapiens genomic DNA; cDNA DKFZp313...	40	9.0
40	gb\|AC163652.3\| Mus musculus BAC clone RP24-315D17 from chromosom...	40	9.0
41	gb\|AC162943.2\| Mus musculus BAC clone RP23-76K9 from chromosome ...	40	9.0
42	gb\|AC022762.8\| Homo sapiens chromosome 11, clone RP11-290F24, co...	40	9.0
43	gb\|AC061999.6\| Homo sapiens chromosome 11, clone RP11-545D22, co...	40	9.0
44	dbj\|AK001423.1\| Homo sapiens cDNA FLJ10561 fis, clone NT2RP2002672	40	9.0
45	gb\|AC073588.3\| Homo sapiens chromosome 10 clone RP11-96N16, comp...	40	9.0
46	gb\|AC022542.5\| Homo sapiens chromosome 10 clone RP11-537G20, com...	40	9.0
47	gb\|AC008425.6\| Homo sapiens chromosome 5 clone CTC-304O9, comple...	40	9.0
48	gb\|AC079634.3\|AC079634 Genomic Sequence for Oryza sativa, Nippon...	40	9.0
49	gb\|AC159233.2\| Mus musculus BAC clone RP24-428L6 from chromosome...	40	9.0
50	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.0
51	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.0
52	gb\|AC007440.6\|AC007440 Drosophila melanogaster, chromosome 2R, r...	40	9.0
53	gb\|AC008142.2\|AC008142 Drosophila melanogaster, chromosome 3R, r...	40	9.0
54	gb\|AC171212.3\| Gallus gallus BAC clone CH261-72C23 from chromoso...	40	9.0
55	gb\|AC013722.8\| Homo sapiens BAC clone RP11-299H21 from 2, comple...	40	9.0
56	gb\|AC139427.3\| Homo sapiens chromosome 11, clone RP13-849E10, co...	40	9.0
57	gb\|AC092840.4\| Homo sapiens BAC clone RP11-258O11 from 2, comple...	40	9.0
58	gb\|AC117415.7\| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cance...	40	9.0
59	emb\|BX648964.1\|HSM809115 Homo sapiens mRNA; cDNA DKFZp686J0156 (...	40	9.0
60	gb\|AC005384.2\|AC005384 b326h7, complete sequence	40	9.0
61	gb\|AE003727.3\| Drosophila melanogaster chromosome 3R, section 65...	40	9.0
62	gb\|AE003823.3\| Drosophila melanogaster chromosome 2R, section 27...	40	9.0
63	emb\|AL109758.3\|CNS018OV Human chromosome 14 DNA sequence BAC R-8...	40	9.0
64	gb\|AC162300.3\| Mus musculus chromosome 3, clone RP23-224F23, com...	40	9.0
65	gb\|AE017125.1\| Helicobacter hepaticus ATCC 51449, complete genome	40	9.0
66	gb\|AC102272.20\| Mus musculus chromosome 3, clone RP24-283P8, com...	40	9.0
67	emb\|CT025753.11\| Mouse DNA sequence from clone RP24-340F12 on ch...	40	9.0
68	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	9.0
69	gb\|AE008384.1\| Methanosarcina mazei strain Goe1, complete genome	40	9.0
70	gb\|AC125345.4\| Mus musculus BAC clone RP24-346N18 from 6, comple...	40	9.0
71	gb\|AF008592.1\|AF008592 Gallus gallus IAP homolog (IAP1) mRNA, nu...	40	9.0
72	emb\|AL645477.8\| Mouse DNA sequence from clone RP23-155L18 on chr...	40	9.0
73	gb\|AF311289.1\| Gallus gallus apoptosis inhibitor ch-IAP1 gene, p...	40	9.0

>ref|XM_470957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1806

 Score =  297 bits (150), Expect = 2e-77
 Identities = 356/424 (83%), Gaps = 3/424 (0%)
 Strand = Plus / Minus

                                                                        
Query: 221  ttcttcaggcagagctcctctactgctgaagccaccctcaataagctagcctcgccccac 280
            |||| ||| ||||||||||| | ||| ||||||||||| |||||||||||||||||||| 
Sbjct: 1763 ttctgcagacagagctcctcgattgcagaagccacccttaataagctagcctcgccccat 1704

                                                                        
Query: 281  ggacggcctatcagttgcaagccgataggaaggccttgcttgtcatgaccaacaggaaca 340
            || || ||||||||||||||||| |||||||| |||||||| |||||||||||||| |||
Sbjct: 1703 ggtcgacctatcagttgcaagcctataggaagcccttgcttatcatgaccaacaggtaca 1644

                                                                        
Query: 341  gtaatggcaggcaagccaagaaggttcccggcaaaaatgaattgcatcagcttggctgac 400
            || || || ||||| |||||||| || || || |  | |||| ||||||| |  ||||||
Sbjct: 1643 gttatcgcgggcaaaccaagaagattgccagctatcacgaatcgcatcaggtaagctgac 1584

                                                                        
Query: 401  acaacataatcagactctcct---tttaaagcacttggtggtatttttggcgcggtcatg 457
            ||||| ||||  |||||||||   || | || |||| ||||||||| ||| || || |||
Sbjct: 1583 acaacgtaattggactctcctaacttcagagaactttgtggtatttctggagcagtgatg 1524

                                                                        
Query: 458  ccggttgtaggggttgctatgacgtcaaccttcttgaaagcttccatgtgatagtacatt 517
            || |||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 1523 ccagttgtaggagttgctatgacatcaaccttcttgaaagcttcattgtgatagtacatt 1464

                                                                        
Query: 518  atccttctcctcagagattgagaagcaacataatctgctgaagtgaatgacctaaaaagt 577
            ||||||||||| |    ||||||||||||||| || |  ||||||||||| | |||||||
Sbjct: 1463 atccttctccttattcgttgagaagcaacatagtcagtcgaagtgaatgatccaaaaagt 1404

                                                                        
Query: 578  gccaaacttgttcgagtatctaacgtcatttccgttcgcctccctgcttggtaatgagca 637
            ||||||||||||||||| |||||||| | ||| |||||  | ||||||  |||||||| |
Sbjct: 1403 gccaaacttgttcgagtgtctaacgtaaattcagttcgttttcctgctctgtaatgagga 1344

                
Query: 638  ttca 641
            ||||
Sbjct: 1343 ttca 1340

to top

>dbj|AK101740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061L19, full
            insert sequence
          Length = 2087

 Score =  297 bits (150), Expect = 2e-77
 Identities = 356/424 (83%), Gaps = 3/424 (0%)
 Strand = Plus / Minus

                                                                        
Query: 221  ttcttcaggcagagctcctctactgctgaagccaccctcaataagctagcctcgccccac 280
            |||| ||| ||||||||||| | ||| ||||||||||| |||||||||||||||||||| 
Sbjct: 1904 ttctgcagacagagctcctcgattgcagaagccacccttaataagctagcctcgccccat 1845

                                                                        
Query: 281  ggacggcctatcagttgcaagccgataggaaggccttgcttgtcatgaccaacaggaaca 340
            || || ||||||||||||||||| |||||||| |||||||| |||||||||||||| |||
Sbjct: 1844 ggtcgacctatcagttgcaagcctataggaagcccttgcttatcatgaccaacaggtaca 1785

                                                                        
Query: 341  gtaatggcaggcaagccaagaaggttcccggcaaaaatgaattgcatcagcttggctgac 400
            || || || ||||| |||||||| || || || |  | |||| ||||||| |  ||||||
Sbjct: 1784 gttatcgcgggcaaaccaagaagattgccagctatcacgaatcgcatcaggtaagctgac 1725

                                                                        
Query: 401  acaacataatcagactctcct---tttaaagcacttggtggtatttttggcgcggtcatg 457
            ||||| ||||  |||||||||   || | || |||| ||||||||| ||| || || |||
Sbjct: 1724 acaacgtaattggactctcctaacttcagagaactttgtggtatttctggagcagtgatg 1665

                                                                        
Query: 458  ccggttgtaggggttgctatgacgtcaaccttcttgaaagcttccatgtgatagtacatt 517
            || |||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 1664 ccagttgtaggagttgctatgacatcaaccttcttgaaagcttcattgtgatagtacatt 1605

                                                                        
Query: 518  atccttctcctcagagattgagaagcaacataatctgctgaagtgaatgacctaaaaagt 577
            ||||||||||| |    ||||||||||||||| || |  ||||||||||| | |||||||
Sbjct: 1604 atccttctccttattcgttgagaagcaacatagtcagtcgaagtgaatgatccaaaaagt 1545

                                                                        
Query: 578  gccaaacttgttcgagtatctaacgtcatttccgttcgcctccctgcttggtaatgagca 637
            ||||||||||||||||| |||||||| | ||| |||||  | ||||||  |||||||| |
Sbjct: 1544 gccaaacttgttcgagtgtctaacgtaaattcagttcgttttcctgctctgtaatgagga 1485

                
Query: 638  ttca 641
            ||||
Sbjct: 1484 ttca 1481

to top

>gb|AY110504.1| Zea mays CL32751_-1 mRNA sequence
          Length = 589

 Score =  214 bits (108), Expect = 3e-52
 Identities = 260/312 (83%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                       
Query: 220 tttcttcaggcagagctcctctactgctgaagccaccctcaataagctagcctcgcccca 279
           ||||||||| || |||||||| ||||| ||||||||||||| |||||| |||||||||||
Sbjct: 250 tttcttcagacacagctcctccactgcagaagccaccctcagtaagcttgcctcgcccca 309

                                                                       
Query: 280 cggacggcctatcagttgcaagccgataggaaggccttgcttgtcatgaccaacaggaac 339
            ||||| |||||||||||||| || |||||||| || |||||||||||||||||||| ||
Sbjct: 310 tggacgacctatcagttgcaaacctataggaagcccctgcttgtcatgaccaacaggcac 369

                                                                       
Query: 340 agtaatggcaggcaagccaagaaggttcccggcaaaaatgaattgcatcagcttggctga 399
           ||| || || || |  |||||||||||||| || |  |||||| ||||||  |  |||||
Sbjct: 370 agttattgctgggagaccaagaaggttccctgctatgatgaatcgcatcaagtaagctga 429

                                                                       
Query: 400 cacaacataatcagactctcct---tttaaagcacttggtggtatttttggcgcggtcat 456
           |||||||||||| |||||||||   || | ||||||||| ||||     || || || ||
Sbjct: 430 cacaacataatctgactctcctgacttcagagcacttggaggtannnnnggagcagtaat 489

                                                                       
Query: 457 gccggttgtaggggttgctatgacgtcaaccttcttgaaagcttccatgtgatagtacat 516
           ||| |||||||| ||||||||||| |  ||||||||||||||||||||| |||| | |||
Sbjct: 490 gccagttgtaggagttgctatgacattgaccttcttgaaagcttccatgngataatgcat 549

                       
Query: 517 tatccttctcct 528
           |||||| |||||
Sbjct: 550 tatcctcctcct 561

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                          
Query: 248    gaagccaccctcaataagctagcctcgccccacggacggcctatcagttgcaagccgata 307
              ||||||||||| |||||||||||||||||||| || || ||||||||||||||||| |||
Sbjct: 179161 gaagccacccttaataagctagcctcgccccatggtcgacctatcagttgcaagcctata 179220

                                        
Query: 308    ggaaggccttgcttgtcatgaccaac 333
              ||||| |||||||| |||||||||||
Sbjct: 179221 ggaagcccttgcttatcatgaccaac 179246



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                          
Query: 461    gttgtaggggttgctatgacgtcaaccttcttgaaagcttccatgtgatagtacattatc 520
              |||||||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||
Sbjct: 181015 gttgtaggagttgctatgacatcaaccttcttgaaagcttcattgtgatagtacattatc 181074

                      
Query: 521    cttctcct 528
              ||||||||
Sbjct: 181075 cttctcct 181082



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 535    ttgagaagcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagt 594
              ||||||||||||||| || |  ||||||||||| | ||||||||||||||||||||||||
Sbjct: 181279 ttgagaagcaacatagtcagtcgaagtgaatgatccaaaaagtgccaaacttgttcgagt 181338

                       
Query: 595    atctaacgt 603
               ||||||||
Sbjct: 181339 gtctaacgt 181347

to top

>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                          
Query: 248    gaagccaccctcaataagctagcctcgccccacggacggcctatcagttgcaagccgata 307
              ||||||||||| |||||||||||||||||||| || || ||||||||||||||||| |||
Sbjct: 110448 gaagccacccttaataagctagcctcgccccatggtcgacctatcagttgcaagcctata 110507

                                        
Query: 308    ggaaggccttgcttgtcatgaccaac 333
              ||||| |||||||| |||||||||||
Sbjct: 110508 ggaagcccttgcttatcatgaccaac 110533



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                          
Query: 461    gttgtaggggttgctatgacgtcaaccttcttgaaagcttccatgtgatagtacattatc 520
              |||||||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||
Sbjct: 112302 gttgtaggagttgctatgacatcaaccttcttgaaagcttcattgtgatagtacattatc 112361

                      
Query: 521    cttctcct 528
              ||||||||
Sbjct: 112362 cttctcct 112369



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 535    ttgagaagcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagt 594
              ||||||||||||||| || |  ||||||||||| | ||||||||||||||||||||||||
Sbjct: 112566 ttgagaagcaacatagtcagtcgaagtgaatgatccaaaaagtgccaaacttgttcgagt 112625

                       
Query: 595    atctaacgt 603
               ||||||||
Sbjct: 112626 gtctaacgt 112634

to top

>gb|BT013470.1| Lycopersicon esculentum clone 132131F, mRNA sequence
          Length = 2075

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 277  ccacggacggcctatcagttgcaagccgataggaaggccttgcttgtcatgaccaacagg 336
            ||||||||| || || ||||||||||| || ||||| |||||||| |||||||||| |||
Sbjct: 1779 ccacggacgaccaataagttgcaagcctattggaagtccttgcttatcatgaccaatagg 1720

                 
Query: 337  aacag 341
             ||||
Sbjct: 1719 gacag 1715

to top

>gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete sequence
          Length = 133868

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 542  gcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagtatc 597
            ||||||||||||||||  || ||||||   ||||||||||||||||| ||||||||
Sbjct: 5063 gcaacataatctgctgcggtaaatgactggaaaagtgccaaacttgtgcgagtatc 5008

to top

>gb|DQ091761.1| Medicago truncatula N-acylethanolamine amidohydrolase mRNA, complete
            cds
          Length = 2336

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 542  gcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagtatc 597
            ||||||||||||||||  || ||||||   ||||||||||||||||| ||||||||
Sbjct: 1575 gcaacataatctgctgcggtaaatgactggaaaagtgccaaacttgtgcgagtatc 1520

to top

>gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-17k4, complete sequence
          Length = 108273

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 542   gcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagtatc 597
             ||||||||||||||||  || ||||||   ||||||||||||||||| ||||||||
Sbjct: 99326 gcaacataatctgctgcggtaaatgactggaaaagtgccaaacttgtgcgagtatc 99271

to top

>gb|BT013475.1| Lycopersicon esculentum clone 132142R, mRNA sequence
          Length = 2027

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 536  tgagaagcaacataatctgctgaagtgaatgacctaaaaagtgccaaacttgttcgagta 595
            |||| ||||||||||||||||| ||| ||||| | ||||| ||||| | |||| ||||||
Sbjct: 1725 tgagcagcaacataatctgctgcagtaaatgaacgaaaaaatgccagatttgtacgagta 1666

              
Query: 596  tc 597
            ||
Sbjct: 1665 tc 1664

to top

>gb|AC027273.5| Homo sapiens BAC clone RP11-764F10 from 4, complete sequence
          Length = 201621

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 46    tacaatgtttctggtaaaattat 68
             |||||||||||||||||||||||
Sbjct: 13346 tacaatgtttctggtaaaattat 13368

to top

>emb|BX649301.3| Zebrafish DNA sequence from clone DKEY-208D13 in linkage group 10,
             complete sequence
          Length = 149467

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 62    aaattattttctcagtttttta 83
             ||||||||||||||||||||||
Sbjct: 22829 aaattattttctcagtttttta 22808

to top

>emb|AJ235273.1|RPXX04 Rickettsia prowazekii strain Madrid E, complete genome; segment 4/4
          Length = 237523

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    attgatagtatggtatattga 170
              |||||||||||||||||||||
Sbjct: 190149 attgatagtatggtatattga 190129

to top

>emb|BX548026.10| Zebrafish DNA sequence from clone CH211-193D9, complete sequence
          Length = 147902

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 524    ctcctcagagattgagaagca 544
              |||||||||||||||||||||
Sbjct: 141862 ctcctcagagattgagaagca 141882

to top

>emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-969O13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202212

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 421    ttttaaagcacttggtggtattttt 445
              ||||| |||||||||||||||||||
Sbjct: 107058 ttttatagcacttggtggtattttt 107034

to top

>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete
             sequence
          Length = 216812

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   gatttcttttcttcaggcaga 233
             |||||||||||||||||||||
Sbjct: 30208 gatttcttttcttcaggcaga 30228

to top

>dbj|AP004938.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096b,
             complete sequence
          Length = 65932

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaggtttgttgtgtctatcct 116
             |||||||||||||||||||||
Sbjct: 38270 aaggtttgttgtgtctatcct 38290

to top

>gb|U14334.1|RPU14334 Rickettsia prowazekii citrate synthase (gltA) gene, complete cds
          Length = 518

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 attgatagtatggtatattga 170
           |||||||||||||||||||||
Sbjct: 122 attgatagtatggtatattga 142

to top

>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    gtaatggcaggcaagccaag 360
              ||||||||||||||||||||
Sbjct: 168920 gtaatggcaggcaagccaag 168939

to top

>gb|AC122791.13| Mus musculus chromosome 13, clone RP24-266G22, complete sequence
          Length = 165861

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    atttcttttcttcaggcaga 233
              ||||||||||||||||||||
Sbjct: 151197 atttcttttcttcaggcaga 151178

to top

>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     tattgctgctacaatgtttc 56
              ||||||||||||||||||||
Sbjct: 109999 tattgctgctacaatgtttc 110018

to top

>ref|NM_001007822.1| Gallus gallus baculoviral IAP repeat-containing 2 (BIRC2), mRNA
          Length = 4457

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 421 ttttaaagcacttggtggtatttt 444
           ||||||| ||||||||||||||||
Sbjct: 782 ttttaaatcacttggtggtatttt 805

to top

>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   gtaatggcaggcaagccaag 360
             ||||||||||||||||||||
Sbjct: 15096 gtaatggcaggcaagccaag 15115

to top

>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence
          Length = 221807

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 529    cagagattgagaagcaacat 548
              ||||||||||||||||||||
Sbjct: 184936 cagagattgagaagcaacat 184955

to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 368     ccggcaaaaatgaattgcat 387
               ||||||||||||||||||||
Sbjct: 2134818 ccggcaaaaatgaattgcat 2134837

to top

>emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, complete sequence
          Length = 42665

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 585   ttgttcgagtatctaacgtcattt 608
             ||||||||||||||||| ||||||
Sbjct: 33229 ttgttcgagtatctaacctcattt 33252

to top

>gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosome 6, complete sequence
          Length = 180332

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   aagcacttggtggtattttt 445
             ||||||||||||||||||||
Sbjct: 82677 aagcacttggtggtattttt 82696

to top

>gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complete sequence
          Length = 150400

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 519   tccttctcctcagagattgagaag 542
             |||||||||||||| |||||||||
Sbjct: 80373 tccttctcctcagaaattgagaag 80396

to top

>gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, complete sequence
          Length = 167735

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ccttttaaagcacttggtgg 438
             ||||||||||||||||||||
Sbjct: 20793 ccttttaaagcacttggtgg 20812

to top

>gb|AC125208.2| Mus musculus BAC clone RP23-183I4 from 6, complete sequence
          Length = 218080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   atgtttcaggtcttcaggat 192
             ||||||||||||||||||||
Sbjct: 13182 atgtttcaggtcttcaggat 13201

to top

>gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosome 13, complete sequence
          Length = 160268

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    atttcttttcttcaggcaga 233
              ||||||||||||||||||||
Sbjct: 110635 atttcttttcttcaggcaga 110654

to top

>emb|CR391920.11| Zebrafish DNA sequence from clone CH211-213B7 in linkage group 16,
              complete sequence
          Length = 199710

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    tttcttttcttcaggcagag 234
              ||||||||||||||||||||
Sbjct: 198294 tttcttttcttcaggcagag 198275

to top

>emb|CR936441.6| Mouse DNA sequence from clone RP23-285D5 on chromosome X, complete
             sequence
          Length = 112051

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ctggtaaaattattttctca 75
             ||||||||||||||||||||
Sbjct: 86942 ctggtaaaattattttctca 86923

to top

>emb|AL713873.11| Human DNA sequence from clone RP11-10L1 on chromosome 1 Contains the 5'
             end of a novel gene, complete sequence
          Length = 101283

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   atggtatattgatgatgttt 178
             ||||||||||||||||||||
Sbjct: 63500 atggtatattgatgatgttt 63519

to top

>emb|AL138927.14| Human DNA sequence from clone RP11-184F4 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 165067

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ggtaaaattattttctcagt 77
             ||||||||||||||||||||
Sbjct: 29619 ggtaaaattattttctcagt 29638

to top

>emb|AL031651.33|HS1054A22 Human DNA sequence from clone RP5-1054A22 on chromosome 20q11.22-12
            Contains the TGM2 gene for transglutaminase 2 (C
            polypeptide,
            protein-glutamine-gamma-glutamyltransferase), the gene
            for a novel protein (KIAA1755), part of a novel gene and
            a CpG island, complete sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 53   tttctggtaaaattattttctcagtttt 80
            ||||||||||| ||||||||||||||||
Sbjct: 8071 tttctggtaaa-ttattttctcagtttt 8045

to top

>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   ccggcaaaaatgaattgcat 387
             ||||||||||||||||||||
Sbjct: 25112 ccggcaaaaatgaattgcat 25131

to top

>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    ctaacgtcatttccgttcgc 616
              ||||||||||||||||||||
Sbjct: 172649 ctaacgtcatttccgttcgc 172668

to top

>emb|AL832661.1|HSM803971 Homo sapiens genomic DNA; cDNA DKFZp313E1012 (from clone
            DKFZp313E1012)
          Length = 3233

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   taaaattattttctcagttt 79
            ||||||||||||||||||||
Sbjct: 2533 taaaattattttctcagttt 2552

to top

>gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosome 17, complete sequence
          Length = 171992

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    ccttttaaagcacttggtgg 438
              ||||||||||||||||||||
Sbjct: 145992 ccttttaaagcacttggtgg 146011

to top

>gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome 16, complete sequence
          Length = 184984

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    atgtttcaggtcttcaggat 192
              ||||||||||||||||||||
Sbjct: 182452 atgtttcaggtcttcaggat 182471

to top

>gb|AC022762.8| Homo sapiens chromosome 11, clone RP11-290F24, complete sequence
          Length = 186604

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tggcaggcaagccaagaagg 364
             ||||||||||||||||||||
Sbjct: 87588 tggcaggcaagccaagaagg 87569

to top

>gb|AC061999.6| Homo sapiens chromosome 11, clone RP11-545D22, complete sequence
          Length = 182549

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     tggtaaaattattttctcagtttt 80
              ||||||||||||| ||||||||||
Sbjct: 174736 tggtaaaattattatctcagtttt 174713

to top

>dbj|AK001423.1| Homo sapiens cDNA FLJ10561 fis, clone NT2RP2002672
          Length = 1665

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   taaaattattttctcagttt 79
            ||||||||||||||||||||
Sbjct: 1013 taaaattattttctcagttt 1032

to top

>gb|AC073588.3| Homo sapiens chromosome 10 clone RP11-96N16, complete sequence
          Length = 166120

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    taaaattattttctcagttt 79
             ||||||||||||||||||||
Sbjct: 10222 taaaattattttctcagttt 10203

to top

>gb|AC022542.5| Homo sapiens chromosome 10 clone RP11-537G20, complete sequence
          Length = 185857

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     taaaattattttctcagttt 79
              ||||||||||||||||||||
Sbjct: 182520 taaaattattttctcagttt 182501

to top

>gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, complete sequence
          Length = 119579

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 412   agactctccttttaaagcacttgg 435
             ||||||||| ||||||||||||||
Sbjct: 47871 agactctccatttaaagcacttgg 47848

to top

>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045C13, from Chromosome 10, complete sequence
          Length = 161250

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    ttttctcagttttttataaa 87
             ||||||||||||||||||||
Sbjct: 53408 ttttctcagttttttataaa 53389

to top

>gb|AC159233.2| Mus musculus BAC clone RP24-428L6 from chromosome 12, complete sequence
          Length = 142100

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     tattttctcagttttttata 85
              ||||||||||||||||||||
Sbjct: 123673 tattttctcagttttttata 123692

to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      ttttctcagttttttataaa 87
               ||||||||||||||||||||
Sbjct: 9820929 ttttctcagttttttataaa 9820910

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 368     ccggcaaaaatgaattgcat 387
               ||||||||||||||||||||
Sbjct: 2134830 ccggcaaaaatgaattgcat 2134849

to top

>gb|AC007440.6|AC007440 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
             BACR37I09, complete sequence
          Length = 184621

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttattttctcagttttttat 84
             ||||||||||||||||||||
Sbjct: 89197 ttattttctcagttttttat 89216

to top

>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone
             BACR48D03, complete sequence
          Length = 175917

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   taaagcacttggtggtattt 443
             ||||||||||||||||||||
Sbjct: 47552 taaagcacttggtggtattt 47571

to top

>gb|AC171212.3| Gallus gallus BAC clone CH261-72C23 from chromosome ul, complete
             sequence
          Length = 202705

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 553   tgctgaagtgaatgacctaaaaag 576
             |||||||||||| |||||||||||
Sbjct: 78630 tgctgaagtgaacgacctaaaaag 78653

to top

>gb|AC013722.8| Homo sapiens BAC clone RP11-299H21 from 2, complete sequence
          Length = 207576

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   aaattattttctcagttttt 81
            ||||||||||||||||||||
Sbjct: 8264 aaattattttctcagttttt 8245

to top

>gb|AC139427.3| Homo sapiens chromosome 11, clone RP13-849E10, complete sequence
          Length = 145885

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     tggtaaaattattttctcagtttt 80
              ||||||||||||| ||||||||||
Sbjct: 105396 tggtaaaattattatctcagtttt 105419

to top

>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence
          Length = 133042

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tattgatagtatggtatatt 168
              ||||||||||||||||||||
Sbjct: 130506 tattgatagtatggtatatt 130487

to top

>gb|AC117415.7| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161090

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tatatactgctgtaccttac 31
              ||||||||||||||||||||
Sbjct: 127968 tatatactgctgtaccttac 127949

to top

>emb|BX648964.1|HSM809115 Homo sapiens mRNA; cDNA DKFZp686J0156 (from clone DKFZp686J0156)
          Length = 4471

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   taaaattattttctcagttt 79
            ||||||||||||||||||||
Sbjct: 3800 taaaattattttctcagttt 3819

to top

>gb|AC005384.2|AC005384 b326h7, complete sequence
          Length = 178292

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    taaaattattttctcagttt 79
             ||||||||||||||||||||
Sbjct: 66263 taaaattattttctcagttt 66282

to top

>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete
              sequence
          Length = 242618

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    taaagcacttggtggtattt 443
              ||||||||||||||||||||
Sbjct: 143166 taaagcacttggtggtattt 143185

to top

>gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27 of 73 of the complete
              sequence
          Length = 292919

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttattttctcagttttttat 84
              ||||||||||||||||||||
Sbjct: 250547 ttattttctcagttttttat 250566

to top

>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 372    caaaaatgaattgcatcagcttgg 395
              ||||||||||||||| ||||||||
Sbjct: 173759 caaaaatgaattgcaccagcttgg 173736

to top

>gb|AC162300.3| Mus musculus chromosome 3, clone RP23-224F23, complete sequence
          Length = 162774

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ctggtaaaattattttctca 75
              ||||||||||||||||||||
Sbjct: 126234 ctggtaaaattattttctca 126215

to top

>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    caaatgataaacctctcaca 145
              ||||||||||||||||||||
Sbjct: 125206 caaatgataaacctctcaca 125187

to top

>gb|AC102272.20| Mus musculus chromosome 3, clone RP24-283P8, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ctggtaaaattattttctca 75
              ||||||||||||||||||||
Sbjct: 144808 ctggtaaaattattttctca 144827

to top

>emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on chromosome 16, complete
             sequence
          Length = 231697

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   atgtttcaggtcttcaggat 192
             ||||||||||||||||||||
Sbjct: 35825 atgtttcaggtcttcaggat 35806

to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      ttttctcagttttttataaa 87
               ||||||||||||||||||||
Sbjct: 9826968 ttttctcagttttttataaa 9826949

to top

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 408     aatcagactctccttttaaa 427
               ||||||||||||||||||||
Sbjct: 1611134 aatcagactctccttttaaa 1611115

to top

>gb|AC125345.4| Mus musculus BAC clone RP24-346N18 from 6, complete sequence
          Length = 152279

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    atgtttcaggtcttcaggat 192
              ||||||||||||||||||||
Sbjct: 137086 atgtttcaggtcttcaggat 137105

to top

>gb|AF008592.1|AF008592 Gallus gallus IAP homolog (IAP1) mRNA, nuclear gene encoding
           mitochondrial protein, complete cds
          Length = 3264

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 421 ttttaaagcacttggtggtatttt 444
           ||||||| ||||||||||||||||
Sbjct: 657 ttttaaatcacttggtggtatttt 680

to top

>emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chromosome X, complete
             sequence
          Length = 189131

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 520   ccttctcctcagagattgagaagc 543
             ||||||||||||||| ||||||||
Sbjct: 76244 ccttctcctcagagagtgagaagc 76267

to top

>gb|AF311289.1| Gallus gallus apoptosis inhibitor ch-IAP1 gene, promoter and partial
            cds
          Length = 9960

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 421  ttttaaagcacttggtggtatttt 444
            ||||||| ||||||||||||||||
Sbjct: 7654 ttttaaatcacttggtggtatttt 7677


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,708,336
Number of Sequences: 3902068
Number of extensions: 6708336
Number of successful extensions: 124939
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 124508
Number of HSP's gapped (non-prelim): 426
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result