>AGRB_STALU (Q54337) Accessory gene regulator protein B (EC 3.4.-.-)|
          Length = 188

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 109 LTHRFKWTLILFVFYLFVSPVRPGEHARSIIIXHVE 2
           L H F +TLI  + Y FV     G HARS ++ H++
Sbjct: 52  LFHTFLYTLITHLTYFFVRRFAHGAHARSSLLCHIQ 87

>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)|
           (LCCP)
          Length = 779

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 257 SSLGSHAPQPSRSVFFSHGTLSQRHXHQ 174
           ++L  H+PQPS S  F+ G L+  H HQ
Sbjct: 596 TTLIRHSPQPSPSSSFNEGLLTGGHRHQ 623

>AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2|
          Length = 772

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 257 SSLGSHAPQPSRSVFFSHGTLSQRHXHQ 174
           ++L  H+PQPS S  F+ G L   H HQ
Sbjct: 593 TTLIRHSPQPSPSSSFNEGLLPGNHRHQ 620

>AGRB_STAHJ (Q4L7S0) Accessory gene regulator protein B (EC 3.4.-.-)|
          Length = 188

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 103 HRFKWTLILFVFYLFVSPVRPGEHARSIIIXHVE 2
           H F +TL   V Y  V     G HA+S ++ HV+
Sbjct: 54  HTFLYTLFTHVSYFLVRRYAHGAHAKSSLLCHVQ 87

>PFA5_ASPFU (Q4WUK1) Palmitoyltransferase pfa5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 446

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 321 QRLXRRCGLRSIIIRKDEHVIQ*PWVPRTATITFSL 214
           + L RR  + ++ IR   H++   W P   TIT+ L
Sbjct: 292 ENLNRRSAVWTLAIRVPRHILSKRWAPTFRTITYPL 327

>KUP_STRA5 (Q8DZL1) Probable potassium transport system protein kup|
          Length = 666

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 382 HEGGIYGSYLPLRSRTPW 329
           HEGGI+  Y  +R  TPW
Sbjct: 84  HEGGIFSLYTLVRKMTPW 101

>KUP_STRA3 (Q8E575) Probable potassium transport system protein kup|
          Length = 666

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 382 HEGGIYGSYLPLRSRTPW 329
           HEGGI+  Y  +R  TPW
Sbjct: 84  HEGGIFSLYTLVRKMTPW 101

>NU2M_CHICK (P18937) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 346

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -2

Query: 262 HPVALGPTHRNHHVQSFFHTGPYLSATXTKWNX*ELSFEHRNGPESCIRTTLTHRFKWTL 83
           HP A+  T +    QS        S+    W+  +      N P SC+  T+    K  L
Sbjct: 49  HPRAIEATIKYFLTQSTASALILFSSMTNAWSTGQWDITQLNHPTSCLMLTMAIAIKLGL 108

Query: 82  ILFVFY 65
           + F F+
Sbjct: 109 VPFHFW 114

>PPCKM_CHICK (P21642) Phosphoenolpyruvate carboxykinase [GTP], mitochondrial|
           precursor (EC 4.1.1.32) (Phosphoenolpyruvate
           carboxylase) (PEPCK-M)
          Length = 640

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 256 LDDMFIFPYNYRAKPTSPXEPLVSSMESVISRVNMTHISHPR 381
           LDD F+   +   +P    EPLVSS     SRV + HI   R
Sbjct: 203 LDDDFVRCLHSVGRPLPLTEPLVSSWPCDRSRVLVAHIPSER 244

>PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2|
           (Brain-specific homeobox/POU domain protein 3B) (Brn-3B)
          Length = 410

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -2

Query: 262 HPVALGPTHRNHHVQSFFHTGPY--LSATXTKWNX*ELSFEHRNGPESCIRTTLTH 101
           HP AL  TH +HH     H  P+  L     +     L+     GP+  + +T  H
Sbjct: 164 HPCALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGAVVSTPAH 219

>HXC8_MOUSE (P09025) Homeobox protein Hox-C8 (Hox-3.1) (M31)|
          Length = 242

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 253 ALGPTHRNHHVQSFFHTG 200
           A G  H +HHVQ FFH G
Sbjct: 46  APGFQHASHHVQDFFHHG 63

>HXC8_HUMAN (P31273) Homeobox protein Hox-C8 (Hox-3A)|
          Length = 242

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 253 ALGPTHRNHHVQSFFHTG 200
           A G  H +HHVQ FFH G
Sbjct: 46  APGFQHASHHVQDFFHHG 63

>NOCT_HUMAN (Q9UK39) Nocturnin (CCR4 protein homolog)|
          Length = 431

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 157 LSFEHRNGPESCIRTTLTHRFK 92
           L  EH NGP+ C    L +RFK
Sbjct: 225 LDVEHNNGPDGCALFFLQNRFK 246

>NOCT_MOUSE (O35710) Nocturnin (CCR4 protein homolog)|
          Length = 429

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 157 LSFEHRNGPESCIRTTLTHRFK 92
           L  EH NGP+ C    L +RFK
Sbjct: 223 LDVEHNNGPDGCALFFLQNRFK 244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,656,437
Number of Sequences: 219361
Number of extensions: 1121148
Number of successful extensions: 2300
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2300
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)