| Clone Name | rbags6b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RWDD1_RAT (Q99ND9) RWD domain-containing protein 1 (Small androg... | 45 | 3e-04 | 2 | RWDD1_MOUSE (Q9CQK7) RWD domain-containing protein 1 (IH1) | 45 | 3e-04 | 3 | RWDD1_HUMAN (Q9H446) RWD domain-containing protein 1 | 44 | 6e-04 | 4 | GIR2_YEAST (Q03768) Protein GIR2 | 36 | 0.12 |
|---|
>RWDD1_RAT (Q99ND9) RWD domain-containing protein 1 (Small androgen| receptor-interacting protein) Length = 243 Score = 44.7 bits (104), Expect = 3e-04 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 615 HGEAVTVESFMAWRERFEAELALQRAKLMPESALTAPKEKKLSGRQYFESGRHI 454 HG VT+E+F++W+ +F+AEL + K M E + KLSG+Q FE+ ++ Sbjct: 142 HGTPVTIENFLSWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFETDHNL 193
>RWDD1_MOUSE (Q9CQK7) RWD domain-containing protein 1 (IH1)| Length = 243 Score = 44.7 bits (104), Expect = 3e-04 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 615 HGEAVTVESFMAWRERFEAELALQRAKLMPESALTAPKEKKLSGRQYFESGRHI 454 HG VT+E+F++W+ +F+AEL + K M E + KLSG+Q FE+ ++ Sbjct: 142 HGTPVTIENFLSWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFETDHNL 193
>RWDD1_HUMAN (Q9H446) RWD domain-containing protein 1| Length = 243 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = -1 Query: 615 HGEAVTVESFMAWRERFEAELALQRAKLMPESALTAPKEKKLSGRQYFESGRHI 454 HG VT+E+F+ W+ +F+AEL + K M E + KLSG+Q FE+ ++ Sbjct: 142 HGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQAG--KNKLSGKQLFETDHNL 193
>GIR2_YEAST (Q03768) Protein GIR2| Length = 265 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 615 HGEAVTVESFMAWRERFEAELAL-QRAKLMPESALTAPKEKKLSGRQYFESG 463 HG VT ES++ WR +F EL L +R ++ A KL+G+Q FE G Sbjct: 187 HGTKVTRESYLEWRSKFRQELKLDERDQVRRMKA----HHGKLTGKQMFEQG 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,105,260 Number of Sequences: 219361 Number of extensions: 1548192 Number of successful extensions: 3974 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3974 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)