>gb|AY110894.1| Zea mays CL19508_1 mRNA sequence
          Length = 675

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 66/74 (89%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                       
Query: 425 agcctcgagatgatgagcctgggccacgttctctgctgcgacggcgcccgtctccatggc 484
           ||||| ||||||||||||| | ||||| ||||||||||| || || |||||||| |||||
Sbjct: 420 agcctggagatgatgagcc-gcgccacattctctgctgctacagcacccgtctctatggc 362

                         
Query: 485 gctcgcggcgctct 498
           ||||||||||||||
Sbjct: 361 gctcgcggcgctct 348

>dbj|AK103159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121B21, full
            insert sequence
          Length = 1727

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 446  ggccacgttctctgctgcgacggcgcccgtctccatggcgctcgcggcgctct 498
            ||||||||| || ||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 1373 ggccacgttttccgctgcaacggcccccgtctccatggcgctcgctgcgctct 1321

>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the
             3' end of a novel gene (FLJ25636) and the 5' end of a
             novel gene (FLJ20276), complete sequence
          Length = 162126

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 235   atcactcagggaaacatgagggaaaa 260
             ||||||||||||||| ||||||||||
Sbjct: 26556 atcactcagggaaacctgagggaaaa 26581

>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence
          Length = 189144

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 192   cattctacactccacattcatc 213
             ||||||||||||||||||||||
Sbjct: 22240 cattctacactccacattcatc 22261

>ref|XM_607597.2| PREDICTED: Bos taurus similar to Zinc finger protein 215 (BWSCR2
            associated zinc-finger protein 2) (BAZ 2) (LOC529157),
            mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  gaagcatcttccacattcact 325
            |||||||||||||||||||||
Sbjct: 1197 gaagcatcttccacattcact 1177

>gb|AC011306.9| Homo sapiens BAC clone RP11-479N15 from 2, complete sequence
          Length = 170101

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   aactgtaacattgcatttcat 194
             |||||||||||||||||||||
Sbjct: 67676 aactgtaacattgcatttcat 67696

>dbj|AP003430.1| Hepatitis E virus genomic RNA, complete genome, isolate:JRA1
          Length = 7230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 286  tcccaggcatcaaaactaaga 306
            |||||||||||||||||||||
Sbjct: 2764 tcccaggcatcaaaactaaga 2744

>ref|XM_531621.1| PREDICTED: Pan troglodytes LOC474139 (LOC474139), mRNA
          Length = 861

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 cactcacaggtccacacgtc 341
           ||||||||||||||||||||
Sbjct: 635 cactcacaggtccacacgtc 616

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 463     cgacggcgcccgtctccatggcgc 486
               |||||||||||| |||||||||||
Sbjct: 1754886 cgacggcgcccgcctccatggcgc 1754909

>gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, complete sequence
          Length = 215331

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  caacagtttctgaaactgta 180
            ||||||||||||||||||||
Sbjct: 7279 caacagtttctgaaactgta 7298

>gb|AC124691.4| Mus musculus BAC clone RP24-158O8 from chromosome 15, complete sequence
          Length = 176829

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    ctcagggaaacatgagggaa 258
              ||||||||||||||||||||
Sbjct: 120832 ctcagggaaacatgagggaa 120813

>emb|AL365181.24| Human DNA sequence from clone RP11-284F21 on chromosome 1 Contains the
             5' end of the MEF2D gene for MADS box transcription
             enhancer factor 2 polypeptide D (myocyte enhancer factor
             2D), the IQGAP3 gene for IQ motif containing GTPase
             activating protein 3, a novel gene, the APOA1BP gene for
             apolipoprotein A-I binding protein, a novel gene
             (FLJ20249), a novel gene, the gene for brain link
             protein-1 (BRAL1), a novel gene, the 5' end of the BCAN
             gene for brevican, the 3' end of a novel gene and three
             CpG islands, complete sequence
          Length = 164512

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ggcaatgtggagaatacatg 100
             ||||||||||||||||||||
Sbjct: 73438 ggcaatgtggagaatacatg 73419

>emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012F16 on chromosome 20 Contains a
             novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 74539

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   atgagggaaaaacaggcact 269
             ||||||||||||||||||||
Sbjct: 26820 atgagggaaaaacaggcact 26801

>emb|AJ488585.1|RSP488585 Rhodobacter sphaeroides third chemotaxis operon (cheA4, R3, B2, Y6,
            A3, W4, slp and tlpT genes)
          Length = 12814

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 463  cgacggcgcccgtctccatggcgc 486
            |||||||||||| |||||||||||
Sbjct: 3916 cgacggcgcccgcctccatggcgc 3893

>dbj|AB220979.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JA41
          Length = 7265

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB220977.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JA36
          Length = 7266

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB220976.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JA28
          Length = 7266

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB220975.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JA19
          Length = 7262

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB220973.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JF5
          Length = 7270

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB220972.1| Hepatitis E virus genomic RNA, complete genome, genotype 4,
            isolate:HE-JF4
          Length = 7271

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2775 tcccaggcatcaaaactaag 2756

>dbj|AB246676.1| Hepatitis E virus genomic RNA, complete genome, isolate:HEVN1
          Length = 7231

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2763 tcccaggcatcaaaactaag 2744

>dbj|AB222182.1| Hepatitis E virus genomic RNA, complete genome, isolate:wbJSG1
          Length = 7240

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2763 tcccaggcatcaaaactaag 2744

>gb|AC024587.5| Homo sapiens chromosome 5 clone RP11-252I13, complete sequence
          Length = 178492

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     gtagtgttaattgtatgcacaatg 52
              |||||||||||| |||||||||||
Sbjct: 175176 gtagtgttaattatatgcacaatg 175153

>gb|AC008800.5|AC008800 Homo sapiens chromosome 5 clone CTD-2062D19, complete sequence
          Length = 85119

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    gtagtgttaattgtatgcacaatg 52
             |||||||||||| |||||||||||
Sbjct: 49047 gtagtgttaattatatgcacaatg 49024

>gb|AF540406.1| Meleagris gallopavo microsatellite MNT-103 mRNA sequence
          Length = 986

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 gcggcgacgggagcccagcg 409
           ||||||||||||||||||||
Sbjct: 60  gcggcgacgggagcccagcg 41

>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase,
             polyketide synthase type Is, acyl transferase, membrane
             protein, ABC transporter, sugar dehydratase/epimerase,
             sugar epimerase, sugar nucleotidyltransferase, sugar
             dehydratase/epimerase, thioesterase, acyl CoA ligase,
             amine oxidase, phosphopantetheinyl transferase,
             transcriptional regulator,
             carboxylase/carboxyltransferase, amidinohydrolase, amide
             synthetase, 5-aminolevulinate synthase, and acyl CoA
             ligase genes, complete cds; and unknown gene
          Length = 161719

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 362   gcgaacgacttgatacggccttcttccg 389
             ||||||| |||||||||||| |||||||
Sbjct: 67334 gcgaacgccttgatacggccgtcttccg 67307

>dbj|AB161719.1| Hepatitis E virus ORF1, ORF2, ORF3 genes for ORF1 protein, ORF2
            protein, ORF3 protein, complete cds, isolate:JYW-Sap02
          Length = 7202

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2750 tcccaggcatcaaaactaag 2731

>dbj|AB161718.1| Hepatitis E virus ORF1, ORF2, ORF3 genes for ORF1 protein, ORF2
            protein, ORF3 protein, complete cds, isolate:JTS-Sap02
          Length = 7202

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2750 tcccaggcatcaaaactaag 2731

>dbj|AB161717.1| Hepatitis E virus ORF1, ORF2, ORF3 genes for ORF1 protein, ORF2
            protein, ORF3 protein, complete cds, isolate:JSM-Sap95
          Length = 7202

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2750 tcccaggcatcaaaactaag 2731

>gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complete sequence
          Length = 160930

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tatcactcagggaaacatga 253
              ||||||||||||||||||||
Sbjct: 127821 tatcactcagggaaacatga 127840

>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete
              sequences
          Length = 185079

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    cactcacaggtccacacgtc 341
              ||||||||||||||||||||
Sbjct: 177093 cactcacaggtccacacgtc 177112

>gb|AF224262.1|AF224262 Heterodontus francisci HoxA10 (HoxA10), HoxA9 (HoxA9), HoxA7 (HoxA7),
             HoxA6 (HoxA6), HoxA5 (HoxA5), HoxA4 (HoxA4), HoxA3
             (HoxA3), HoxA2 (HoxA2), and HoxA1 (HoxA1) genes, complete
             cds
          Length = 81196

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   aaactaagaagcatcttccacatt 321
             |||||||| |||||||||||||||
Sbjct: 35691 aaactaaggagcatcttccacatt 35668

>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   cactcacaggtccacacgtc 341
             ||||||||||||||||||||
Sbjct: 76423 cactcacaggtccacacgtc 76442

>gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosome 13, complete
             sequence
          Length = 229410

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   caacagtttctgaaactgta 180
             ||||||||||||||||||||
Sbjct: 57392 caacagtttctgaaactgta 57373

>dbj|AB074917.3| Hepatitis E virus genomic RNA, nearly complete genome,
            isolate:JKK-Sap
          Length = 7235

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tcccaggcatcaaaactaag 305
            ||||||||||||||||||||
Sbjct: 2759 tcccaggcatcaaaactaag 2740

>gb|AC154390.1| Mus musculus BAC clone RP23-10G24 from 13, complete sequence
          Length = 190233

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    caacagtttctgaaactgta 180
              ||||||||||||||||||||
Sbjct: 115329 caacagtttctgaaactgta 115348

>dbj|AP001476.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f25H12, telomere
             region, complete sequence
          Length = 32025

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   cactcacaggtccacacgtc 341
             ||||||||||||||||||||
Sbjct: 30238 cactcacaggtccacacgtc 30257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,303,882
Number of Sequences: 3902068
Number of extensions: 4303882
Number of successful extensions: 86382
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86251
Number of HSP's gapped (non-prelim): 130
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)