>SYFB_ACIAD (Q6F873) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 793

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
 Frame = -2

Query: 477 PDQWRLLLRRINKSQGGLYPRMQLCQALVFLASSRVGMGHSCPS-----PGERKLSARKL 313
           PD  RL +  +N   G   P   +C A     + RVGM     +     PGE K+   KL
Sbjct: 57  PDADRLRVTTVNIGNGE--PLQIVCGA----PNLRVGMKAPVATIGAVLPGEFKIKKGKL 110

Query: 312 HQVEISGFACGAGTILLQ 259
             +E  G  CGA  I L+
Sbjct: 111 RGIESQGMLCGASEIDLE 128

>TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4|
          Length = 633

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
 Frame = +2

Query: 254 WN*SKIVPAPQANPLIST*CNFLADNFLSPG------LGQLCPMPTLLDAKKTKA*HNCI 415
           W  +KIV   + NPL       +   F+  G      L +LC +P+ L     +A    +
Sbjct: 505 WYRAKIVAIKEFNPLS------ILVQFVDYGSTAKLTLNRLCQIPSHLMRYPARAIKVLL 558

Query: 416 LGYKPP*LLLIRRSSNLHWSGVCPKQSIRALW 511
            G+KPP      R         CPK S+ ALW
Sbjct: 559 AGFKPP-----LRDLGETRIPYCPKWSMEALW 585

>SURE_WOLTR (Q5GS87) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside|
           5'-monophosphate phosphohydrolase)
          Length = 250

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -3

Query: 638 RSIYDQAL*CSWHGNLHWYNTKI 570
           RSI   AL  ++HG ++WYNTKI
Sbjct: 118 RSIPSIALSQAYHGGINWYNTKI 140

>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)|
           (Protein BIPOSTO) (Auxin-responsive protein
           IAA21/IAA23/IAA25)
          Length = 1164

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 486 LSNRSEHCGSASSPSHARLDDSPI*IFINLSVVPMKIAMP 605
           +S+ S H G  ++ +HA  ++SP  IF N    P +  +P
Sbjct: 240 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVP 279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,068,371
Number of Sequences: 219361
Number of extensions: 1848923
Number of successful extensions: 4257
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4256
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)