>THII_BACHD (Q9K804) Probable thiamine biosynthesis protein thiI|
          Length = 404

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 16/79 (20%), Positives = 38/79 (48%)
 Frame = +3

Query: 18  YYYTRINLNITGVYGTSSTTANKEPKERVIDQSIVVVVCAIQLRIQLVPLAAVDAKISSK 197
           YY  +  + +  ++  S    N++ K++V+D +  +     Q+++ +VP   +   I  K
Sbjct: 197 YYLLKRGVTLEAIHFHSPPFTNEKAKQKVVDLAAKLTNFGGQVKLHIVPFTELQKHIHEK 256

Query: 198 IYIHSNGTVVNRIQARGEE 254
           +  +   T++ R+  R  E
Sbjct: 257 VPSNMEMTIMRRMMLRISE 275

>EFTS_CHLMU (P71146) Elongation factor Ts (EF-Ts)|
          Length = 282

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
 Frame = +3

Query: 33  INLNITGVYGTSSTTANKEPKERVID-QSIVVVVCAIQLRIQLVPLAAVDAKISSKIYIH 209
           +N  ++ V   +  T+++EP   V + +++ +      +RI       V++  S  IY H
Sbjct: 101 LNNKLSDVDALAQVTSSQEPSLSVEELKAVTMQTVGENIRISRALYTPVNSNQSVGIYSH 160

Query: 210 SNGTVVNRIQARGEERRDRTGSD---------PQTSTKESNP 308
            NG  V  +   G ++++    D         PQ  +KES P
Sbjct: 161 GNGKAVALVFLSGSDKQEALAKDIAMHIVASQPQFLSKESVP 202

>SECY_BUCAI (P57571) Preprotein translocase secY subunit|
          Length = 437

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/60 (28%), Positives = 33/60 (55%)
 Frame = +3

Query: 51  GVYGTSSTTANKEPKERVIDQSIVVVVCAIQLRIQLVPLAAVDAKISSKIYIHSNGTVVN 230
           G+   ++ T+  E K+R++   + ++V  I      +P+  +D  I SKI  + NGT+V+
Sbjct: 6   GLNFKNTKTSVSELKQRIVFLIVAIIVFRIG---SFIPIPGIDTTILSKILNNQNGTIVD 62

>PRIM_MYCPU (Q98QB3) DNA primase (EC 2.7.7.-)|
          Length = 602

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = +3

Query: 141 QLRIQLVPLAAVDAKISSKIYIHSNGTVVNRIQARGEERRDRTGSDPQTSTKESNPWRNQ 320
           QL I +  +A    K+S K  +HSN  +V+ +++RG  R   T S+ +    + N W+  
Sbjct: 110 QLFIDVTSIANHYFKVSLKSQVHSNSKLVDFLKSRGISR--ETASEFEIGYDDGNFWKIP 167

Query: 321 NQ 326
           N+
Sbjct: 168 NK 169

>ILF2_XENTR (Q6P8G1) Interleukin enhancer-binding factor 2 homolog|
          Length = 388

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 215 WDGGQSNPSERRGEKRPDR-IGSPNEHQGIESMAESEPDL 331
           WDG    PSE+  EK P+R  G  +E+Q I   AE E  +
Sbjct: 345 WDGVIVTPSEKAYEKPPERKEGEEDENQDIPEGAEEEESM 384

>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor|
          Length = 743

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 599 DPFLPGPPGRPRTLKPAFGGQH 534
           +P LPGPPG P   KP   G H
Sbjct: 520 EPGLPGPPGFPGVGKPGVAGLH 541

>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial|
           collagen)
          Length = 744

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 599 DPFLPGPPGRPRTLKPAFGGQH 534
           +P LPGPPG P   KP   G H
Sbjct: 520 EPGLPGPPGFPGVGKPGVAGLH 541

>CCNB1_ORYCU (Q9DGA4) G2/mitotic-specific cyclin-B1|
          Length = 401

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 584 GPPGRPRTLKPAFGGQHVLDGDVTQSNLRTQLAAGAVEVEVKLNAKA 444
           GP  +PR      G   V++ DVT+ N++T++A      + K+ AKA
Sbjct: 26  GPTQKPRAALGEIGNVAVINKDVTKKNVKTEVAK-----KTKIPAKA 67

>BCHN_RHOGE (Q9JPA2) Light-independent protochlorophyllide reductase subunit N|
           (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N)
          Length = 427

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 444 SFGVELDLDLDRPCRQLRPEVALCDVAVEHVLAAE 548
           S G +L+  LDR CR  RP++ +C + + + L AE
Sbjct: 354 SEGQDLERQLDR-CRAARPDIVVCGLGLANPLEAE 387

>U183_DROME (Q9VSH9) UPF0183 protein CG7083|
          Length = 438

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = -3

Query: 343 PTDCKVWF*FRHGFDSLVLVWGSDPVRSLLS----SPLAWIRLTTVPLLC 206
           P D K+   + HG  SLV + G+ PV S +S    S +   R+ ++PL C
Sbjct: 139 PVDSKLHSGYAHGLSSLVFLNGASPVVSKMSLYAGSNVLENRVPSLPLSC 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,917,129
Number of Sequences: 219361
Number of extensions: 1097515
Number of successful extensions: 3639
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)