ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY374513.1| Oryza sativa (japonica cultivar-group) myosin hea... 297 3e-77
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 297 3e-77
3dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 297 3e-77
4dbj|AK120271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 3e-77
5dbj|AK104858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 3e-77
6dbj|AK068466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 3e-77
7gb|AY374514.1| Oryza sativa (japonica cultivar-group) myosin hea... 258 2e-65
8gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 109 1e-20
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
11emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in... 46 0.15
12emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on ch... 44 0.61
13emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on ch... 44 0.61
14gb|AF218210.1| Cryphonectria parasitica mitochondrial extrachrom... 42 2.4
15gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, comp... 42 2.4
16gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosom... 42 2.4
17gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, com... 42 2.4
18gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, co... 42 2.4
19gb|AC114878.2| Homo sapiens chromosome 1 clone RP11-272L13, comp... 42 2.4
20emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on ch... 42 2.4
21gb|AC158135.5| Mus musculus chromosome 3, clone RP24-393I15, com... 42 2.4
22gb|AC130842.5| Mus musculus BAC clone RP24-448N19 from chromosom... 42 2.4
23dbj|AB162145.1| Homo sapiens DPYD gene for dihydropyrimidine deh... 42 2.4
24emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in l... 42 2.4
25ref|NM_120017.1| Arabidopsis thaliana unknown protein AT4G38560 ... 40 9.5
26ref|XM_641181.1| Dictyostelium discoideum hypothetical protein (... 40 9.5
27gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 9.5
28gb|AC156561.3| Mus musculus BAC clone RP24-264F22 from chromosom... 40 9.5
29gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosom... 40 9.5
30gb|AC163996.6| Mus musculus chromosome 8, clone RP23-6B9, comple... 40 9.5
31gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, co... 40 9.5
32gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, comp... 40 9.5
33gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome ... 40 9.5
34ref|NM_004588.3| Homo sapiens sodium channel, voltage-gated, typ... 40 9.5
35gb|AC183271.3| Pan troglodytes BAC clone CH251-356H14 from chrom... 40 9.5
36gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome... 40 9.5
37gb|AC158305.4| Mus musculus chromosome 1, clone RP23-131K23, com... 40 9.5
38gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.5
39gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, co... 40 9.5
40gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, comp... 40 9.5
41gb|AC132455.3| Mus musculus BAC clone RP23-129K10 from chromosom... 40 9.5
42gb|AC121789.2| Mus musculus BAC clone RP23-398C14 from 1, comple... 40 9.5
43gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complet... 40 9.5
44gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, com... 40 9.5
45ref|XM_672320.1| Plasmodium berghei strain ANKA vesicle transpor... 40 9.5
46gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, c... 40 9.5
47emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chr... 40 9.5
48gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, com... 40 9.5
49emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 40 9.5
50gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 9.5
51emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 40 9.5
52emb|AL731817.11| Mouse DNA sequence from clone RP23-3J16 on chro... 40 9.5
53gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Can... 40 9.5
54emb|CR860366.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0412 (from cl... 40 9.5
55gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 40 9.5
56dbj|AB089137.1| Gorilla gorilla gene for CMP-N-acetylneuraminic ... 40 9.5
57gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, compl... 40 9.5
58emb|CR625871.1| full-length cDNA clone CS0DC001YL16 of Neuroblas... 40 9.5
59dbj|AK094643.1| Homo sapiens cDNA FLJ37324 fis, clone BRAMY2018279 40 9.5
60dbj|AK090729.1| Homo sapiens cDNA FLJ33410 fis, clone BRACE2012653 40 9.5
61ref|XM_681302.1| PREDICTED: Danio rerio similar to pericentriola... 40 9.5
62gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, comp... 40 9.5
63gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, compl... 40 9.5
64gb|AF080172.1|AF080172 Haemonchus contortus putative zinc metall... 40 9.5
65gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome... 40 9.5
66gb|AC008965.6| Homo sapiens chromosome 5 clone CTD-2364L17, comp... 40 9.5
67gb|AC026440.4|AC026440 Homo sapiens chromosome 5 clone CTD-2269F... 40 9.5
68gb|BT023434.1| Arabidopsis thaliana At4g38560 gene, complete cds 40 9.5
69gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosom... 40 9.5
70gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana... 40 9.5
71gb|BC059256.1| Mus musculus Notch gene homolog 2 (Drosophila), m... 40 9.5
72emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chro... 40 9.5
73dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.5
74emb|Z83744.1|CEC06A12 Caenorhabditis elegans Cosmid C06A12, comp... 40 9.5
75emb|AL832780.1|HSM804091 Homo sapiens mRNA; cDNA DKFZp686J037 (f... 40 9.5
76gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, com... 40 9.5
77emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, B... 40 9.5
78emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on ch... 40 9.5
79gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, compl... 40 9.5
80emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chrom... 40 9.5
81emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chr... 40 9.5
82emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on ch... 40 9.5
83emb|AL928640.3| Mouse DNA sequence from clone RP23-314C7 on chro... 40 9.5 
>gb|AY374513.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class VIII
            A1 protein (MyoVIIIA1) mRNA, complete cds
          Length = 4864

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 298  ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
            ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 4395 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 4342

                                                                        
Query: 358  ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
            |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 4341 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 4282

                                                                        
Query: 418  caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
            | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 4281 cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 4222

                                                                        
Query: 478  cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
            | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 4221 cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 4162

                                                                        
Query: 538  actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
            ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 4161 actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 4102

                                                                        
Query: 598  taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
            |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 4101 tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 4042

                                               
Query: 658  tggacattgtatcttcagagtcgtattgagcatgc 692
            | |||   ||||||||||| || || |||||||||
Sbjct: 4041 tcgac---gtatcttcagaatcataatgagcatgc 4010



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 34   catacatacactgacaactcagnaactaacatacatgtacag 75
            ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 4689 catacatacactgacaacaaag-aactaatatacatgtacag 4649
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Plus

                                                                            
Query: 298      ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
                ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 22435691 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 22435744

                                                                            
Query: 358      ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
                |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 22435745 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 22435804

                                                                            
Query: 418      caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
                | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 22435805 cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 22435864

                                                                            
Query: 478      cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
                | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 22435865 cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 22435924

                                                                            
Query: 538      actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
                ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 22435925 actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 22435984

                                                                            
Query: 598      taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
                |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 22435985 tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 22436044

                                                   
Query: 658      tggacattgtatcttcagagtcgtattgagcatgc 692
                | |||   ||||||||||| || || |||||||||
Sbjct: 22436045 tcgac---gtatcttcagaatcataatgagcatgc 22436076



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                          
Query: 34       catacatacactgacaactcagnaactaacatacatgtacag 75
                ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 22435397 catacatacactgacaacaaag-aactaatatacatgtacag 22435437
to top
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Plus

                                                                         
Query: 298   ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
             ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 96758 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 96811

                                                                         
Query: 358   ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
             |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 96812 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 96871

                                                                         
Query: 418   caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
             | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 96872 cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 96931

                                                                         
Query: 478   cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
             | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 96932 cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 96991

                                                                         
Query: 538   actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
             ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 96992 actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 97051

                                                                         
Query: 598   taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
             |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 97052 tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 97111

                                                
Query: 658   tggacattgtatcttcagagtcgtattgagcatgc 692
             | |||   ||||||||||| || || |||||||||
Sbjct: 97112 tcgac---gtatcttcagaatcataatgagcatgc 97143



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                       
Query: 34    catacatacactgacaactcagnaactaacatacatgtacag 75
             ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 96464 catacatacactgacaacaaag-aactaatatacatgtacag 96504
to top
>dbj|AK120271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M22, full
            insert sequence
          Length = 3296

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 298  ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
            ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 2859 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 2806

                                                                        
Query: 358  ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
            |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 2805 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 2746

                                                                        
Query: 418  caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
            | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 2745 cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 2686

                                                                        
Query: 478  cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
            | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 2685 cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 2626

                                                                        
Query: 538  actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
            ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 2625 actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 2566

                                                                        
Query: 598  taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
            |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 2565 tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 2506

                                               
Query: 658  tggacattgtatcttcagagtcgtattgagcatgc 692
            | |||   ||||||||||| || || |||||||||
Sbjct: 2505 tcgac---gtatcttcagaatcataatgagcatgc 2474



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 34   catacatacactgacaactcagnaactaacatacatgtacag 75
            ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 3153 catacatacactgacaacaaag-aactaatatacatgtacag 3113
to top
>dbj|AK104858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D03, full
            insert sequence
          Length = 1552

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 298  ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
            ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 1110 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 1057

                                                                        
Query: 358  ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
            |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 1056 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 997

                                                                        
Query: 418  caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
            | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 996  cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 937

                                                                        
Query: 478  cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
            | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 936  cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 877

                                                                        
Query: 538  actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
            ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 876  actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 817

                                                                        
Query: 598  taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
            |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 816  tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 757

                                               
Query: 658  tggacattgtatcttcagagtcgtattgagcatgc 692
            | |||   ||||||||||| || || |||||||||
Sbjct: 756  tcgac---gtatcttcagaatcataatgagcatgc 725



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 34   catacatacactgacaactcagnaactaacatacatgtacag 75
            ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 1404 catacatacactgacaacaaag-aactaatatacatgtacag 1364
to top
>dbj|AK068466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155K02, full
            insert sequence
          Length = 4236

 Score =  297 bits (150), Expect = 3e-77
 Identities = 334/395 (84%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 298  ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
            ||||||| ||||||||||||||||||||||||||||| |||||||| |||      |  |
Sbjct: 3792 ttcactttgagctcttcttcccccaccatcttttccgggatttctcctca------ccaa 3739

                                                                        
Query: 358  ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgtag 417
            |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 3738 ccttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtcg 3679

                                                                        
Query: 418  caaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgtc 477
            | || |||||||| ||||| | |||||| || || || ||||| || ||||| |  ||||
Sbjct: 3678 cgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttgaaccaacttgtc 3619

                                                                        
Query: 478  cagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctcaa 537
            | || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 3618 cggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctcaa 3559

                                                                        
Query: 538  actcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccactc 597
            ||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   ||||||
Sbjct: 3558 actccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccactc 3499

                                                                        
Query: 598  taggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccctg 657
            |||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| |
Sbjct: 3498 tagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccgg 3439

                                               
Query: 658  tggacattgtatcttcagagtcgtattgagcatgc 692
            | |||   ||||||||||| || || |||||||||
Sbjct: 3438 tcgac---gtatcttcagaatcataatgagcatgc 3407



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 34   catacatacactgacaactcagnaactaacatacatgtacag 75
            ||||||||||||||||||  || |||||| ||||||||||||
Sbjct: 4086 catacatacactgacaacaaag-aactaatatacatgtacag 4046
to top
>gb|AY374514.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class VIII
            A2 protein (MyoVIIIA2) mRNA, complete cds
          Length = 4488

 Score =  258 bits (130), Expect = 2e-65
 Identities = 285/336 (84%), Gaps = 3/336 (0%)
 Strand = Plus / Minus

                                                                        
Query: 357  accttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgta 416
            ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 4439 accttctgaagatttaccttggtctccttcaaccgagacttgtagtctttcttccatgtc 4380

                                                                        
Query: 417  gcaaaccggtccttcagcttcctgagttcgtcatccggattcatattcgaaccgatctgt 476
            || || |||||||| ||||| | |||||| || || || ||||| || | ||| |  |||
Sbjct: 4379 gcgaatcggtccttgagctttcggagttcatcgtctgggttcatgtttggaccaacttgt 4320

                                                                        
Query: 477  ccagatttcacggcgacaaggaagccagcgtcgtcgtcaaacacctgccgcctgtcctca 536
            || || |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 4319 ccggacttcacggcaacaaggaagccagcatcgtcttcaaacacctgccgcctgtcctca 4260

                                                                        
Query: 537  aactcctttgctaggtgattcactacatttatccgcctatctgagtttcctgtcaccact 596
            |||||||| |||||||| |||||  | ||||||||||||||||| ||   ||   |||||
Sbjct: 4259 aactccttggctaggtggttcaccgcgtttatccgcctatctgaattcggtgctgccact 4200

                                                                        
Query: 597  ctaggttcagggttgtggttttggaatttcaactctgttccttccggggtatgggtccct 656
            ||||  |||| ||||||||||||  |||| |||||||| ||||| |||||||||||||| 
Sbjct: 4199 ctagcctcagagttgtggttttgatatttgaactctgtcccttcaggggtatgggtcccg 4140

                                                
Query: 657  gtggacattgtatcttcagagtcgtattgagcatgc 692
            || |||   ||||||||||| || || |||||||||
Sbjct: 4139 gtcgac---gtatcttcagaatcataatgagcatgc 4107
to top
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
             sequence
          Length = 167239

 Score =  109 bits (55), Expect = 1e-20
 Identities = 102/118 (86%), Gaps = 6/118 (5%)
 Strand = Plus / Plus

                                                                         
Query: 298   ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
             ||||||| |||||||||||||||| ||||||||||||  ||||||| |||      |  |
Sbjct: 78640 ttcactttgagctcttcttcccccgccatcttttccggcatttctcctca------ccaa 78693

                                                                       
Query: 358   ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgt 415
             |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 78694 ccttctgaatatttaccttggtctccttcaaccgagacttgtagtctttcttccatgt 78751
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 102/118 (86%), Gaps = 6/118 (5%)
 Strand = Plus / Minus

                                                                            
Query: 298      ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
                ||||||| |||||||||||||||| ||||||||||||  ||||||| |||      |  |
Sbjct: 21006638 ttcactttgagctcttcttcccccgccatcttttccggcatttctcctca------ccaa 21006585

                                                                          
Query: 358      ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgt 415
                |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 21006584 ccttctgaatatttaccttggtctccttcaaccgagacttgtagtctttcttccatgt 21006527
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 102/118 (86%), Gaps = 6/118 (5%)
 Strand = Plus / Minus

                                                                            
Query: 298      ttcacttggagctcttcttcccccaccatcttttccgagatttctcgtcatggctgctga 357
                ||||||| |||||||||||||||| ||||||||||||  ||||||| |||      |  |
Sbjct: 20999667 ttcactttgagctcttcttcccccgccatcttttccggcatttctcctca------ccaa 20999614

                                                                          
Query: 358      ccttctgaaggtttaccttggtctccttcaaccgagatttgtagtctttcttccatgt 415
                |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 20999613 ccttctgaatatttaccttggtctccttcaaccgagacttgtagtctttcttccatgt 20999556
to top
>emb|AL954688.9| Zebrafish DNA sequence from clone CH211-212L1 in linkage group 4,
             complete sequence
          Length = 210027

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 27    acatacacatacatacactgaca 49
             |||||||||||||||||||||||
Sbjct: 60195 acatacacatacatacactgaca 60173
to top
>emb|AL356428.11| Human DNA sequence from clone RP11-343F16 on chromosome 1, complete
              sequence
          Length = 174739

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 26     aacatacacatacatacactga 47
              ||||||||||||||||||||||
Sbjct: 123963 aacatacacatacatacactga 123942
to top
>emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on chromosome 13 Contains the
             3' end of a novel gene, the CENJP gene for centromere
             protein J (LAP, CPAP, LIP1, BM032), 2 novel genes, a
             pseudogene similar to part of solute carrier family 25
             (mitochondrial carrier; ornithine transporter) member 15
             (SLC25A15), a TPTE and PTEN homologous inositol lipid
             phosphatase (TPIP) pseudogene, a 60S ribisomal protein L34
             (RPL34) pseudogene and 2 CpG islands, complete sequence
          Length = 167319

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 29    atacacatacatacactgacaa 50
             ||||||||||||||||||||||
Sbjct: 70783 atacacatacatacactgacaa 70804
to top
>gb|AF218210.1| Cryphonectria parasitica mitochondrial extrachromosomal element
            pleC9, complete sequence
          Length = 1364

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 624  ttcaactctgttccttccggg 644
            |||||||||||||||||||||
Sbjct: 1252 ttcaactctgttccttccggg 1272
to top
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence
          Length = 215326

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     acaacatacacatacatacac 44
              |||||||||||||||||||||
Sbjct: 129489 acaacatacacatacatacac 129469
to top
>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete sequence
          Length = 182891

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    ccttctctcctgccatctgtt 231
              |||||||||||||||||||||
Sbjct: 151601 ccttctctcctgccatctgtt 151581
to top
>gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, complete sequence
          Length = 188435

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     acatacacatacatacactga 47
              |||||||||||||||||||||
Sbjct: 166612 acatacacatacatacactga 166592
to top
>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence
          Length = 209224

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     acatacacatacatacactga 47
              |||||||||||||||||||||
Sbjct: 192565 acatacacatacatacactga 192585
to top
>gb|AC114878.2| Homo sapiens chromosome 1 clone RP11-272L13, complete sequence
          Length = 194999

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 300    cacttggagctcttcttcccc 320
              |||||||||||||||||||||
Sbjct: 159106 cacttggagctcttcttcccc 159126
to top
>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a
              novel gene (2210415F13Rik), an NADH dehydrogenase
              (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel
              pseudogene, a novel gene (1810065E05Rik), a novel gene
              similar to rat solute carrier family 11 member 1 (Slc11a1),
              a novel gene, the  Olfr30 gene for olfactory receptor 30,
              an olfactory receptor (MOR284-1P) pseudogene, the gene for
              olfactory receptor MOR284-2 (LOC216774),  a novel gene
              similar to MOR275 (LOC193140), a ribosomal protein L24
              (Rpl24) pseudogene, the gene for olfactory receptor
              MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5)
              pseudogene, an olfactory receptor (MOR275-3) pseudogene and
              a CpG island, complete sequence
          Length = 191700

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    cttccatgttcacttggagct 310
              |||||||||||||||||||||
Sbjct: 102316 cttccatgttcacttggagct 102336
to top
>gb|AC158135.5| Mus musculus chromosome 3, clone RP24-393I15, complete sequence
          Length = 191562

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    acaacatacacatacatacac 44
             |||||||||||||||||||||
Sbjct: 72407 acaacatacacatacatacac 72427
to top
>gb|AC130842.5| Mus musculus BAC clone RP24-448N19 from chromosome 3, complete sequence
          Length = 184249

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     acaacatacacatacatacac 44
              |||||||||||||||||||||
Sbjct: 152266 acaacatacacatacatacac 152246
to top
>dbj|AB162145.1| Homo sapiens DPYD gene for dihydropyrimidine dehydrogenase, promoter
            region
          Length = 3019

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 300  cacttggagctcttcttcccc 320
            |||||||||||||||||||||
Sbjct: 1216 cacttggagctcttcttcccc 1196
to top
>emb|BX004838.8| Zebrafish DNA sequence from clone DKEY-29N1 in linkage group 7,
             complete sequence
          Length = 226160

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    acaacatacacatacatacac 44
             |||||||||||||||||||||
Sbjct: 51148 acaacatacacatacatacac 51168
to top
>ref|NM_120017.1| Arabidopsis thaliana unknown protein AT4G38560 mRNA, complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  gctctgaccttgtagcttcc 294
            ||||||||||||||||||||
Sbjct: 1037 gctctgaccttgtagcttcc 1018
to top
>ref|XM_641181.1| Dictyostelium discoideum hypothetical protein (DDB0190549), partial
            mRNA
          Length = 3099

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  tctcttcatttgatgcaatt 253
            ||||||||||||||||||||
Sbjct: 2959 tctcttcatttgatgcaatt 2940
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     gtccaccgtctccgccatct 168
               ||||||||||||||||||||
Sbjct: 3739002 gtccaccgtctccgccatct 3738983
to top
>gb|AC156561.3| Mus musculus BAC clone RP24-264F22 from chromosome 14, complete
             sequence
          Length = 170677

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    acacatacatacactgacaa 50
             ||||||||||||||||||||
Sbjct: 49919 acacatacatacactgacaa 49938
to top
>gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosome 17, complete
             sequence
          Length = 180635

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    acacatacatacactgacaa 50
             ||||||||||||||||||||
Sbjct: 54791 acacatacatacactgacaa 54810
to top
>gb|AC163996.6| Mus musculus chromosome 8, clone RP23-6B9, complete sequence
          Length = 206641

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 18     acacgnacaacatacacatacatacac 44
              ||||| |||||||||||| ||||||||
Sbjct: 103005 acacgcacaacatacacacacatacac 103031
to top
>gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, complete sequence
          Length = 223532

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    gggttgtggttttggaattt 625
              ||||||||||||||||||||
Sbjct: 142779 gggttgtggttttggaattt 142798
to top
>gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, complete sequence
          Length = 159888

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 18    acacgnacaacatacacatacatacac 44
             ||||| |||||| ||||||||||||||
Sbjct: 74307 acacgcacaacacacacatacatacac 74333
to top
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence
          Length = 175603

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    aacatacacatacatacactgaca 49
             |||| |||||||||||||||||||
Sbjct: 98429 aacacacacatacatacactgaca 98406
to top
>ref|NM_004588.3| Homo sapiens sodium channel, voltage-gated, type II, beta (SCN2B),
            mRNA
          Length = 4939

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tctcttgctgtgcctcttgc 97
            ||||||||||||||||||||
Sbjct: 4480 tctcttgctgtgcctcttgc 4499
to top
>gb|AC183271.3| Pan troglodytes BAC clone CH251-356H14 from chromosome 7, complete
              sequence
          Length = 183934

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     caacatacacatacatacac 44
              ||||||||||||||||||||
Sbjct: 120079 caacatacacatacatacac 120098
to top
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    aacatacacatacatacactgaca 49
             |||| |||||||||||||||||||
Sbjct: 12025 aacacacacatacatacactgaca 12002
to top
>gb|AC158305.4| Mus musculus chromosome 1, clone RP23-131K23, complete sequence
          Length = 199641

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 18    acacgnacaacatacacatacatacac 44
             ||||| |||||| ||||||||||||||
Sbjct: 61748 acacgcacaacacacacatacatacac 61722
to top
>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete
              sequence
          Length = 205177

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     acatacacatacatacactg 46
              ||||||||||||||||||||
Sbjct: 119741 acatacacatacatacactg 119760
to top
>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence
          Length = 205819

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   aacatacacatacatacactgaca 49
            ||||||||||||||||||| ||||
Sbjct: 1042 aacatacacatacatacacagaca 1065
to top
>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    tgaggaaatgctctgacctt 285
              ||||||||||||||||||||
Sbjct: 194208 tgaggaaatgctctgacctt 194227
to top
>gb|AC132455.3| Mus musculus BAC clone RP23-129K10 from chromosome 17, complete sequence
          Length = 210538

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                             
Query: 15     catacacgnacaacatacacatacatacact 45
              |||||||  |||||| |||||||||||||||
Sbjct: 120780 catacacaaacaacacacacatacatacact 120750
to top
>gb|AC121789.2| Mus musculus BAC clone RP23-398C14 from 1, complete sequence
          Length = 181157

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   tcatggctgctgaccttctgaagg 368
             ||||||||| ||||||||||||||
Sbjct: 17498 tcatggctggtgaccttctgaagg 17475
to top
>gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complete sequence
          Length = 194178

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     caacatacacatacatacac 44
              ||||||||||||||||||||
Sbjct: 185907 caacatacacatacatacac 185888
to top
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence
          Length = 215769

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aacatacacatacatacact 45
              ||||||||||||||||||||
Sbjct: 203097 aacatacacatacatacact 203078
to top
>ref|XM_672320.1| Plasmodium berghei strain ANKA vesicle transport protein,
            (PB000004.00.0) partial mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 606  gggttgtggttttggaattt 625
            ||||||||||||||||||||
Sbjct: 2209 gggttgtggttttggaattt 2190
to top
>gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, complete sequence
          Length = 206793

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     aacatacacatacatacactgaca 49
              ||||||||||||||||||| ||||
Sbjct: 144018 aacatacacatacatacacagaca 144041
to top
>emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chromosome 9 Contains part
              of the GPR51 gene for G protein-coupled receptor 51 (HG20,
              GABBR2, GPRC3B, GABABR2) and a CpG island, complete
              sequence
          Length = 155837

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aacatacacatacatacact 45
              ||||||||||||||||||||
Sbjct: 108499 aacatacacatacatacact 108480
to top
>gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence
          Length = 197449

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 533    ctcaaactcctttgctaggtgatt 556
              ||||||||||||| ||||||||||
Sbjct: 111231 ctcaaactcctttcctaggtgatt 111208
to top
>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aacatacacatacatacact 45
             ||||||||||||||||||||
Sbjct: 48781 aacatacacatacatacact 48762
to top
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete
             sequence
          Length = 178963

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    caacatacacatacatacac 44
             ||||||||||||||||||||
Sbjct: 63452 caacatacacatacatacac 63433
to top
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gctctgaccttgtagcttcc 294
              ||||||||||||||||||||
Sbjct: 139604 gctctgaccttgtagcttcc 139585
to top
>emb|AL731817.11| Mouse DNA sequence from clone RP23-3J16 on chromosome 11 Contains a
             novel gene and the 3' end of a novel gene, complete
             sequence
          Length = 103582

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    acaacatacacatacataca 43
             ||||||||||||||||||||
Sbjct: 57366 acaacatacacatacataca 57385
to top
>gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 131894

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   aacatacacatacatacact 45
            ||||||||||||||||||||
Sbjct: 2570 aacatacacatacatacact 2551
to top
>emb|CR860366.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0412 (from clone DKFZp459O0412)
          Length = 1757

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tctcttgctgtgcctcttgc 97
            ||||||||||||||||||||
Sbjct: 1314 tctcttgctgtgcctcttgc 1333
to top
>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    acatacacatacatacactgacaa 50
             ||||||||||||||||||| ||||
Sbjct: 77952 acatacacatacatacacttacaa 77975
to top
>dbj|AB089137.1| Gorilla gorilla gene for CMP-N-acetylneuraminic acid hydroxylase,
            partial cds, Alu repeat region
          Length = 8299

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  tttctgacactcccaaaaaa 122
            ||||||||||||||||||||
Sbjct: 6821 tttctgacactcccaaaaaa 6840
to top
>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence
          Length = 180483

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aacatacacatacatacact 45
              ||||||||||||||||||||
Sbjct: 161702 aacatacacatacatacact 161683
to top
>emb|CR625871.1| full-length cDNA clone CS0DC001YL16 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 918

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  tctcttgctgtgcctcttgc 97
           ||||||||||||||||||||
Sbjct: 504 tctcttgctgtgcctcttgc 523
to top
>dbj|AK094643.1| Homo sapiens cDNA FLJ37324 fis, clone BRAMY2018279
          Length = 2844

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tctcttgctgtgcctcttgc 97
            ||||||||||||||||||||
Sbjct: 2403 tctcttgctgtgcctcttgc 2422
to top
>dbj|AK090729.1| Homo sapiens cDNA FLJ33410 fis, clone BRACE2012653
          Length = 2007

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tctcttgctgtgcctcttgc 97
            ||||||||||||||||||||
Sbjct: 1572 tctcttgctgtgcctcttgc 1591
to top
>ref|XM_681302.1| PREDICTED: Danio rerio similar to pericentriolar material 1 protein
            (LOC558118), mRNA
          Length = 6776

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 426  tccttcagcttcctgagttcgtca 449
            ||||||||||||||||||| ||||
Sbjct: 1770 tccttcagcttcctgagtttgtca 1747
to top
>gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, complete sequence
          Length = 165675

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aacatacacatacatacact 45
             ||||||||||||||||||||
Sbjct: 36188 aacatacacatacatacact 36169
to top
>gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, complete sequence
          Length = 112595

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     aacatacacatacatacact 45
              ||||||||||||||||||||
Sbjct: 111226 aacatacacatacatacact 111245
to top
>gb|AF080172.1|AF080172 Haemonchus contortus putative zinc metallopeptidase (MEP3) mRNA,
           partial cds
          Length = 2646

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 435 ttcctgagttcgtcatccgg 454
           ||||||||||||||||||||
Sbjct: 972 ttcctgagttcgtcatccgg 953
to top
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence
          Length = 203908

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aacatacacatacatacact 45
             ||||||||||||||||||||
Sbjct: 20065 aacatacacatacatacact 20046
to top
>gb|AC008965.6| Homo sapiens chromosome 5 clone CTD-2364L17, complete sequence
          Length = 139939

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aacatacacatacatacact 45
             ||||||||||||||||||||
Sbjct: 33763 aacatacacatacatacact 33782
to top
>gb|AC026440.4|AC026440 Homo sapiens chromosome 5 clone CTD-2269F5, complete sequence
          Length = 103115

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    acaacatacacatacataca 43
             ||||||||||||||||||||
Sbjct: 22775 acaacatacacatacataca 22756
to top
>gb|BT023434.1| Arabidopsis thaliana At4g38560 gene, complete cds
          Length = 1650

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  gctctgaccttgtagcttcc 294
            ||||||||||||||||||||
Sbjct: 1057 gctctgaccttgtagcttcc 1038
to top
>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete
             sequence
          Length = 202134

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    acaacatacacatacataca 43
             ||||||||||||||||||||
Sbjct: 67745 acaacatacacatacataca 67764
to top
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gctctgaccttgtagcttcc 294
             ||||||||||||||||||||
Sbjct: 25923 gctctgaccttgtagcttcc 25942
to top
>gb|BC059256.1| Mus musculus Notch gene homolog 2 (Drosophila), mRNA (cDNA clone
          IMAGE:6406444), complete cds
          Length = 4616

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 27 acatacacatacatacactg 46
          ||||||||||||||||||||
Sbjct: 78 acatacacatacatacactg 59
to top
>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete
              sequence
          Length = 141997

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     acacatacatacactgacaa 50
              ||||||||||||||||||||
Sbjct: 113751 acacatacatacactgacaa 113770
to top
>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete
             sequence
          Length = 215441

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    tctcttgctgtgcctcttgc 97
             ||||||||||||||||||||
Sbjct: 85845 tctcttgctgtgcctcttgc 85826
to top
>emb|Z83744.1|CEC06A12 Caenorhabditis elegans Cosmid C06A12, complete sequence
          Length = 39774

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcccaaaaaactggacgcgc 132
             ||||||||||||||||||||
Sbjct: 18216 tcccaaaaaactggacgcgc 18235
to top
>emb|AL832780.1|HSM804091 Homo sapiens mRNA; cDNA DKFZp686J037 (from clone DKFZp686J037)
          Length = 7208

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   aacatacacatacatacact 45
            ||||||||||||||||||||
Sbjct: 1461 aacatacacatacatacact 1480
to top
>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence
          Length = 163698

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    tcatggctgctgaccttctgaagg 368
              ||||||||| ||||||||||||||
Sbjct: 160022 tcatggctggtgaccttctgaagg 159999
to top
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   gctctgaccttgtagcttcc 294
             ||||||||||||||||||||
Sbjct: 40545 gctctgaccttgtagcttcc 40526
to top
>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
             sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   cttcttcccccaccatcttt 330
             ||||||||||||||||||||
Sbjct: 69185 cttcttcccccaccatcttt 69204
to top
>gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, complete sequence
          Length = 186427

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     acacatacatacactgacaa 50
              ||||||||||||||||||||
Sbjct: 130145 acacatacatacactgacaa 130164
to top
>emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chromosome 4, complete
             sequence
          Length = 125201

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    acacatacatacactgacaa 50
             ||||||||||||||||||||
Sbjct: 60940 acacatacatacactgacaa 60921
to top
>emb|AL606987.11| Mouse DNA sequence from clone RP23-383I4 on chromosome 4, complete
              sequence
          Length = 212647

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     acacatacatacactgacaa 50
              ||||||||||||||||||||
Sbjct: 160694 acacatacatacactgacaa 160713
to top
>emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on chromosome 4, complete
             sequence
          Length = 185210

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    acacatacatacactgacaa 50
             ||||||||||||||||||||
Sbjct: 90724 acacatacatacactgacaa 90743
to top
>emb|AL928640.3| Mouse DNA sequence from clone RP23-314C7 on chromosome 4, complete
             sequence
          Length = 104113

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 533   ctcaaactcctttgctaggtgatt 556
             ||||||||||||| ||||||||||
Sbjct: 93708 ctcaaactcctttcctaggtgatt 93731


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,484,576
Number of Sequences: 3902068
Number of extensions: 6484576
Number of successful extensions: 185903
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 185495
Number of HSP's gapped (non-prelim): 394
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top