>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 2e-28
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                            
Query: 228      tcacatnttgcccttgcggtgcgcgcaggacgagccggcgcacccttccacgcacttntc 287
                |||||| ||||| | |||||| |||||||  | | ||| |||||| || |||||||| ||
Sbjct: 11672585 tcacatcttgccgtggcggtgggcgcaggtggcgtcggggcacccctcgacgcacttctc 11672644

                                                                            
Query: 288      gacgcatttgtccagccgntccgccgcccgctccttggccaaccggtccttctcatcgaa 347
                 ||||| ||||||| ||| |||||||| |||||| | | || |||||||||||| |||||
Sbjct: 11672645 cacgcacttgtccacccgctccgccgcgcgctccctcgtcagccggtccttctcctcgaa 11672704

                                                                
Query: 348      gtacacggacgccgccttntccgcggcgcgctccttcacctcgcgctc 395
                |||||| ||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 11672705 gtacaccgacgccgccttctccgccgcgcgctccttcaccgcgcgctc 11672752



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 457      accgtcagcttctccttgatcgcgcccgtcatgttgcccagcgccccgaacaggcc 512
                ||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||
Sbjct: 11672793 accgtcagcttctccttgatcgcccccgtcacgttccccagcgccccgagcaggcc 11672848



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 538      tcgtgggtgccggccgtctcccttgccttgtcggcggctgtctgcgtggt 587
                ||||||||| ||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 11672963 tcgtgggtggcggccgtctccctggccttgtcggcggcggtctgggtggt 11673012

>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0093J20, from chromosome 3, complete sequence
          Length = 148635

 Score =  135 bits (68), Expect = 2e-28
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                         
Query: 228   tcacatnttgcccttgcggtgcgcgcaggacgagccggcgcacccttccacgcacttntc 287
             |||||| ||||| | |||||| |||||||  | | ||| |||||| || |||||||| ||
Sbjct: 61680 tcacatcttgccgtggcggtgggcgcaggtggcgtcggggcacccctcgacgcacttctc 61739

                                                                         
Query: 288   gacgcatttgtccagccgntccgccgcccgctccttggccaaccggtccttctcatcgaa 347
              ||||| ||||||| ||| |||||||| |||||| | | || |||||||||||| |||||
Sbjct: 61740 cacgcacttgtccacccgctccgccgcgcgctccctcgtcagccggtccttctcctcgaa 61799

                                                             
Query: 348   gtacacggacgccgccttntccgcggcgcgctccttcacctcgcgctc 395
             |||||| ||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 61800 gtacaccgacgccgccttctccgccgcgcgctccttcaccgcgcgctc 61847



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 457   accgtcagcttctccttgatcgcgcccgtcatgttgcccagcgccccgaacaggcc 512
             ||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||
Sbjct: 61888 accgtcagcttctccttgatcgcccccgtcacgttccccagcgccccgagcaggcc 61943



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 538   tcgtgggtgccggccgtctcccttgccttgtcggcggctgtctgcgtggt 587
             ||||||||| ||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 62058 tcgtgggtggcggccgtctccctggccttgtcggcggcggtctgggtggt 62107

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                            
Query: 228      tcacatnttgcccttgcggtgcgcgcaggacgagccggcgcacccttccacgcacttntc 287
                |||||| ||||| | |||||| |||||||  | | ||| |||||| || |||||||| ||
Sbjct: 11669348 tcacatcttgccgtggcggtgggcgcaggtggcgtcggggcacccctcgacgcacttctc 11669407

                                                                            
Query: 288      gacgcatttgtccagccgntccgccgcccgctccttggccaaccggtccttctcatcgaa 347
                 ||||| ||||||| ||| |||||||| |||||| | | || |||||||||||| |||||
Sbjct: 11669408 cacgcacttgtccacccgctccgccgcgcgctccctcgtcagccggtccttctcctcgaa 11669467

                                                                
Query: 348      gtacacggacgccgccttntccgcggcgcgctccttcacctcgcgctc 395
                |||||| ||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 11669468 gtacaccgacgccgccttctccgccgcgcgctccttcaccgcgcgctc 11669515



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 457      accgtcagcttctccttgatcgcgcccgtcatgttgcccagcgccccgaacaggcc 512
                ||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||
Sbjct: 11669556 accgtcagcttctccttgatcgcccccgtcacgttccccagcgccccgagcaggcc 11669611



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 538      tcgtgggtgccggccgtctcccttgccttgtcggcggctgtctgcgtggt 587
                ||||||||| ||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 11669726 tcgtgggtggcggccgtctccctggccttgtcggcggcggtctgggtggt 11669775

>gb|AY112256.1| Zea mays CL2904_1 mRNA sequence
          Length = 595

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/126 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 tcacatnttgcccttgcggtgcgcgcaggacgagccggcgcacccttccacgcacttntc 287
           |||||| || |||| ||| ||| ||||||||||||||||||| || ||||||||||| ||
Sbjct: 210 tcacatcttcccctggcgatgcacgcaggacgagccggcgcaaccctccacgcacttctc 269

                                                                       
Query: 288 gacgcatttgtccagccgntccgccgcccgctccttggccaaccggtccttctcatcgaa 347
           |||||| | ||||| ||| |||||||| |||| ||    || |||||||||||| |||||
Sbjct: 270 gacgcactggtccacccgctccgccgcacgctgctgcatcagccggtccttctcctcgaa 329

                 
Query: 348 gtacac 353
           ||||||
Sbjct: 330 gtacac 335



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 459 cgtcagcttctccttgatcgcgcccgtca 487
           |||||||||||||||||||||||||||||
Sbjct: 423 cgtcagcttctccttgatcgcgcccgtca 451



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 538 tcgtgggtgccggccgtctcccttgccttgtcggcggctgtctg 581
           ||||| |||| |||||||||||| |||||||| ||||| |||||
Sbjct: 499 tcgtgagtgctggccgtctccctagccttgtcagcggcggtctg 542

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 457      accgtcagcttctccttgatcgcgcccgtca 487
                ||||||||||||||||||||||| |||||||
Sbjct: 24426034 accgtcagcttctccttgatcgctcccgtca 24426064

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 457     accgtcagcttctccttgatcgcgcccgtca 487
               ||||||||||||||||||||||| |||||||
Sbjct: 1988242 accgtcagcttctccttgatcgctcccgtca 1988212

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 457      accgtcagcttctccttgatcgcgcccgtca 487
                ||||||||||||||||||||||| |||||||
Sbjct: 38086781 accgtcagcttctccttgatcgctcccgtca 38086811

>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0471B04
          Length = 138025

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 457   accgtcagcttctccttgatcgcgcccgtca 487
             ||||||||||||||||||||||| |||||||
Sbjct: 54815 accgtcagcttctccttgatcgctcccgtca 54845

>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0018C10
          Length = 200183

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 457  accgtcagcttctccttgatcgcgcccgtca 487
            ||||||||||||||||||||||| |||||||
Sbjct: 6015 accgtcagcttctccttgatcgctcccgtca 6045

>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548D03
          Length = 156709

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 457    accgtcagcttctccttgatcgcgcccgtca 487
              ||||||||||||||||||||||| |||||||
Sbjct: 117022 accgtcagcttctccttgatcgctcccgtca 116992

>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0041F13
          Length = 163230

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 457  accgtcagcttctccttgatcgcgcccgtca 487
            ||||||||||||||||||||||| |||||||
Sbjct: 9104 accgtcagcttctccttgatcgctcccgtca 9074

>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 457   accgtcagcttctccttgatcgcgcccgtca 487
             ||||||||||||||||||||||| |||||||
Sbjct: 51901 accgtcagcttctccttgatcgctcccgtca 51931

>emb|BX041672.1|CNS094BG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC13BA09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 974

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 459 cgtcagcttctccttgatcgcgc 481
           |||||||||||||||||||||||
Sbjct: 593 cgtcagcttctccttgatcgcgc 615

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 457      accgtcagcttctccttgatcgc 479
                |||||||||||||||||||||||
Sbjct: 28725253 accgtcagcttctccttgatcgc 28725275

>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 457   accgtcagcttctccttgatcgc 479
             |||||||||||||||||||||||
Sbjct: 41826 accgtcagcttctccttgatcgc 41848

>ref|XM_309437.2| Anopheles gambiae str. PEST ENSANGP00000008302 (ENSANGG00000006265),
            partial mRNA
          Length = 2309

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 459  cgtcagcttctccttgatcgcgc 481
            |||||||||||||||||||||||
Sbjct: 1716 cgtcagcttctccttgatcgcgc 1694

>ref|XM_564296.1| Anopheles gambiae str. PEST ENSANGP00000029487 (ENSANGG00000006265),
            partial mRNA
          Length = 2552

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 459  cgtcagcttctccttgatcgcgc 481
            |||||||||||||||||||||||
Sbjct: 1959 cgtcagcttctccttgatcgcgc 1937

>gb|AY593775.1| Foot-and-mouth disease virus A isolate a32ven iso36, complete genome
          Length = 8211

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 495  cagcgccccgaacaggccggt 515
            |||||||||||||||||||||
Sbjct: 1947 cagcgccccgaacaggccggt 1927

>gb|AY593773.1| Foot-and-mouth disease virus A isolate a29peru iso37, complete genome
          Length = 8202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 495  cagcgccccgaacaggccggt 515
            |||||||||||||||||||||
Sbjct: 1947 cagcgccccgaacaggccggt 1927

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 367    tccgcggcgcgctccttcacctcgcgctcgtcc 399
              |||||||||||| ||| | ||||||||||||||
Sbjct: 228085 tccgcggcgcgcgcctgcgcctcgcgctcgtcc 228117



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 369     cgcggcgcgctccttcacct 388
               ||||||||||||||||||||
Sbjct: 1465301 cgcggcgcgctccttcacct 1465282

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 620     tccccttggtggcgtcggtgt 640
               |||||||||||||||||||||
Sbjct: 2460788 tccccttggtggcgtcggtgt 2460808



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     cgcccagccggatgccgtgc 423
               ||||||||||||||||||||
Sbjct: 2469209 cgcccagccggatgccgtgc 2469190

>gb|AY365117.2| Mycobacterium vanbaalenii strain PYR-1 phenanthree degradation pathway
             gene cluster, complete sequence
          Length = 37237

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   gtcgcccagccggatgccgt 421
             ||||||||||||||||||||
Sbjct: 34422 gtcgcccagccggatgccgt 34403

>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a
             gene for a novel protein (MGC35463), complete sequence
          Length = 107891

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   cctgcagcgtcgtgctgctg 443
             ||||||||||||||||||||
Sbjct: 45327 cctgcagcgtcgtgctgctg 45346

>gb|AC025575.21| Homo sapiens 12 BAC RP11-934P3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158531

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    tagtaaaagaaacttgaaaa 47
             ||||||||||||||||||||
Sbjct: 73552 tagtaaaagaaacttgaaaa 73571

>gb|AE012115.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 23 of
            460 of the complete genome
          Length = 10703

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  ctcgcgctcgtcctcgtcgc 406
            ||||||||||||||||||||
Sbjct: 2729 ctcgcgctcgtcctcgtcgc 2710

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 245     ggtgcgcgcaggacgagccggcgc 268
               |||||||| |||||||||||||||
Sbjct: 1979746 ggtgcgcgaaggacgagccggcgc 1979769

>emb|CR389393.1| Gallus gallus finished cDNA, clone ChEST185a6
          Length = 717

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 435 gtgctgctgcgtgccggagc 454
           ||||||||||||||||||||
Sbjct: 231 gtgctgctgcgtgccggagc 212

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    ctcgcgctcgtcctcgtcgc 406
              ||||||||||||||||||||
Sbjct: 246135 ctcgcgctcgtcctcgtcgc 246116

>gb|AF466932.1| Zea mays clone BAC 206C17, complete sequence
          Length = 99156

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  cgtgcgggcgcgtgtgtcgc 219
            ||||||||||||||||||||
Sbjct: 3065 cgtgcgggcgcgtgtgtcgc 3084

>gb|AF525490.2| Streptomyces griseus fredericamycin biosynthetic gene cluster,
            complete sequence
          Length = 33064

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 494  ccagcgccccgaacaggccg 513
            ||||||||||||||||||||
Sbjct: 3786 ccagcgccccgaacaggccg 3805

>gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, complete sequence
          Length = 194871

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     agtaaaagaaacttgaaaac 48
              ||||||||||||||||||||
Sbjct: 153771 agtaaaagaaacttgaaaac 153790

>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete
             sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaaagaaacttgaaaactca 51
             ||||||||||||||||||||
Sbjct: 23495 aaaagaaacttgaaaactca 23476

>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    gaaggcgcgcccgcgtgcgg 206
              ||||||||||||||||||||
Sbjct: 130943 gaaggcgcgcccgcgtgcgg 130962


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,552,606
Number of Sequences: 3902068
Number of extensions: 3552606
Number of successful extensions: 70426
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69591
Number of HSP's gapped (non-prelim): 834
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)