ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6a21 |
|---|---|
| Clone Library Name | barley_pub |
>NUSB_SYNP7 (Q8GIR7) N utilization substance protein B homolog (Protein nusB)| Length = 213 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/48 (54%), Positives = 32/48 (66%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 493 L+ IL +A AE+ GTP +VAINEAV+LA R+ D R ING LR Sbjct: 149 LDQDILRLAAAEILFLGTPEQVAINEAVELANRYSDEEGRRFINGVLR 196
>NUSB_SYNY3 (P74395) N utilization substance protein B homolog (Protein nusB)| Length = 221 Score = 48.5 bits (114), Expect = 2e-05 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = -1 Query: 624 ILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 493 IL +A+AE+ G P KVAINEAV+LAKR+ R ING LR Sbjct: 160 ILRLAIAELDYLGVPQKVAINEAVELAKRYSGQDGHRFINGVLR 203
>NUSB_SYNEL (Q8DKS0) N utilization substance protein B homolog (Protein nusB)| Length = 212 Score = 47.0 bits (110), Expect = 5e-05 Identities = 24/48 (50%), Positives = 32/48 (66%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 493 L+ I+ IA+ EM +VAINEA++LAKR+ D G+ R ING LR Sbjct: 150 LDRAIIEIAVVEMRYLEVAKQVAINEAIELAKRYSDEGSHRFINGVLR 197
>NUSB_THETN (Q8RAD1) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 46.6 bits (109), Expect = 7e-05 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Frame = -1 Query: 660 KDEPVARI--LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD P+ R+ ++L IL +M EM P ++INEAV++AK++ +P ING L + Sbjct: 67 KDWPLYRMPRIDLAILRCSMYEMLYGNIPVSISINEAVEIAKKYSTDDSPSFINGLLGAF 126 Query: 486 VKD 478 V++ Sbjct: 127 VRE 129
>NUSB_STRR6 (P65583) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 46.6 bits (109), Expect = 7e-05 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -1 Query: 639 ILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 ++E +L + + E+TS TP VA+NEA++LAK F D + R ING L +V + Sbjct: 85 LVERNLLRLGVFEITSFDTPQLVAVNEAIELAKDFSDQKSARFINGLLSQFVTE 138
>NUSB_STRPN (P65582) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 46.6 bits (109), Expect = 7e-05 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -1 Query: 639 ILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 ++E +L + + E+TS TP VA+NEA++LAK F D + R ING L +V + Sbjct: 85 LVERNLLRLGVFEITSFDTPQLVAVNEAIELAKDFSDQKSARFINGLLSQFVTE 138
>NUSB_ANASP (Q8YW56) N utilization substance protein B homolog (Protein nusB)| Length = 211 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/44 (56%), Positives = 29/44 (65%) Frame = -1 Query: 624 ILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLR 493 IL IA+AEM P+ VAINEAV+LAKR+ R ING LR Sbjct: 157 ILRIAVAEMMFFNLPNSVAINEAVELAKRYSGDEGHRFINGVLR 200
>NUSB_LACLA (Q9CHN4) N utilization substance protein B homolog (Protein nusB)| Length = 192 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/53 (41%), Positives = 33/53 (62%) Frame = -1 Query: 639 ILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 ++E IL ++ E+ TP VA+NEAV+L+K F D + R ING L ++K Sbjct: 140 LVEQAILQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFINGVLTNFLK 192
>NUSB_VIBVY (Q7MN52) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 43.5 bits (101), Expect = 6e-04 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -1 Query: 639 ILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++EL +L +AM EMT + P+KV INEA++LAK F + + +NG L Sbjct: 97 MMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_VIBVU (Q8DFA0) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 43.5 bits (101), Expect = 6e-04 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -1 Query: 639 ILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++EL +L +AM EMT + P+KV INEA++LAK F + + +NG L Sbjct: 97 MMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_VIBPA (Q87RU3) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 43.5 bits (101), Expect = 6e-04 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -1 Query: 639 ILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++EL +L +AM EMT + P+KV INEA++LAK F + + +NG L Sbjct: 97 MMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_VIBCH (Q9KPU5) N utilization substance protein B homolog (Protein nusB)| Length = 156 Score = 43.5 bits (101), Expect = 6e-04 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -1 Query: 639 ILELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++EL +L +AM EMT + P+KV INEA++LAK F + + +NG L Sbjct: 97 MMELALLRLAMYEMTRREDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_GLOVI (Q7NKZ0) N utilization substance protein B homolog (Protein nusB)| Length = 211 Score = 43.5 bits (101), Expect = 6e-04 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = -1 Query: 624 ILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 IL +A+ EM K P +VAI+EAV+LAK++ A R ING LR V+ Sbjct: 153 ILRLALVEMVELKSVPFRVAIDEAVELAKKYSTDTAVRFINGVLRRVVQ 201
>NUSB_STAAW (P65579) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_STAAS (Q6G941) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_STAAR (Q6GGH4) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_STAAN (P65578) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_STAAM (P65577) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_STAAC (Q5HFP7) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 660 KDEPVARILEL--CILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 KD +AR+L+ IL +A E+ TP KV +NEAV+L K+F D + ING L Sbjct: 68 KDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNI 127 Query: 486 VK 481 K Sbjct: 128 KK 129
>NUSB_RHOBA (Q7USA9) N utilization substance protein B homolog (Protein nusB)| Length = 145 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = -1 Query: 624 ILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDH 475 +L + E+ GTP +VAI+EA+ LAKR+ +PR ING L K H Sbjct: 88 VLRLGAYEILYSGTPGQVAISEALTLAKRYGGENSPRFINGVLDRLFKYH 137
>NUSB_CAMJR (Q5HW85) N utilization substance protein B homolog (Protein nusB)| Length = 132 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 +E IL + E+ TP + INEA++LAK + +P+ ING L +K Sbjct: 78 VERAILRLGAYELLFTDTPSAIVINEAIELAKELANDNSPKFINGVLDALIK 129
>NUSB_CAMJE (Q9PIC0) N utilization substance protein B homolog (Protein nusB)| Length = 132 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 +E IL + E+ TP + INEA++LAK + +P+ ING L +K Sbjct: 78 VERAILRLGAYELLFTDTPSAIVINEAIELAKELANDNSPKFINGVLDALIK 129
>NUSB_STAES (Q8CP37) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 660 KDEPVARIL--ELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 KD + R+L + IL +A E+ TP KV +NEAV+L K+F D + +NG L Sbjct: 68 KDWSIDRLLKSDRIILRMATFEILHSDTPKKVVVNEAVELTKQFSDDDHYKFVNGVL 124
>NUSB_STAEQ (Q5HP28) N utilization substance protein B homolog (Protein nusB)| Length = 129 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 660 KDEPVARIL--ELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 KD + R+L + IL +A E+ TP KV +NEAV+L K+F D + +NG L Sbjct: 68 KDWSIDRLLKSDRIILRMATFEILHSDTPKKVVVNEAVELTKQFSDDDHYKFVNGVL 124
>NUSB_BACCR (Q818R4) N utilization substance protein B homolog (Protein nusB)| Length = 130 Score = 40.4 bits (93), Expect = 0.005 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 I++ IL +A+ EM + PH V INEA+++AK F D + R ING L + +KD Sbjct: 75 IVDRSILRVAVYEMKYMEEIPHNVTINEAIEIAKTFGDEESRRFINGVL-SNIKD 128
>NUSB_BACAN (Q81M49) N utilization substance protein B homolog (Protein nusB)| Length = 130 Score = 40.4 bits (93), Expect = 0.005 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 I++ IL +A+ EM + PH V INEA+++AK F D + R ING L + +KD Sbjct: 75 IVDRSILRVAVYEMKYMEEIPHNVTINEAIEIAKTFGDEESRRFINGVL-SNIKD 128
>NUSB_SHIFL (P0A783) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_SALTY (Q8ZRD3) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_SALTI (Q8Z8X6) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_ECOLI (P0A780) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_ECOL6 (P0A781) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_ECO57 (P0A782) N utilization substance protein B (Protein nusB)| Length = 139 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVL 127
>NUSB_YERPE (Q8ZC42) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L IA+ E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VERAVLRIALFELSKRDDVPYKVAINEAIELAKTFGAEDSHKFVNGVL 127
>NUSB_PHOLL (Q7N0J0) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL IAM E++ + P+KVAINEA++LAK F + + +NG L Sbjct: 80 VEKAILRIAMFELSYRDDVPYKVAINEAIELAKVFGAEDSHKFVNGVL 127
>NUSB_SHEON (Q8EBP4) N utilization substance protein B homolog (Protein nusB)| Length = 134 Score = 39.3 bits (90), Expect = 0.011 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 D P+ + +E I+ +A E+T K P KVAINEA++LAK F + + +NG L Sbjct: 71 DRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESHKFVNGLL 127
>NUSB_WOLSU (Q7MAE9) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 39.3 bits (90), Expect = 0.011 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL + E+ G V INEAV+L+K F + +PR +NG L Sbjct: 79 MERAILRLGTFEIVYSGVDRAVIINEAVELSKTFGNDNSPRFVNGVL 125
>NUSB_ENTFA (Q836W8) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 38.9 bits (89), Expect = 0.014 Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 +++ IL +A+ EM P+ VA+NEAV+L+K++ D + + +NG L +K+ Sbjct: 96 IDIVILRLAIFEMLYVSDVPNIVALNEAVELSKKYSDDRSRKFVNGVLSNVMKE 149
>NUSB_BLOFL (Q7VRI1) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 38.5 bits (88), Expect = 0.018 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNG 463 +E +L IA+ E+T P+KV INEA++LAK F + + ING L + + + G Sbjct: 80 IEYSVLLIALFELTQCCDVPYKVVINEAIELAKIFGSEKSHKFINGVLDKIITEKLYKG 138
>NUSB_BACSU (P54520) N utilization substance protein B homolog (Protein nusB)| Length = 131 Score = 38.5 bits (88), Expect = 0.018 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 ++ IL +A EM ++ P V++NEA++LAKRF D A + +NG L D Sbjct: 74 VDRAILRLAAYEMAYAEDIPVNVSMNEAIELAKRFGDDKATKFVNGVLSNIKSD 127
>NUSB_PSEAE (Q9HWX6) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 38.5 bits (88), Expect = 0.018 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 D P+A I +EL IL ++ E+ ++ P+KV INE ++LAK F + +NG L Sbjct: 86 DRPLAEIDPVELAILRLSTYELRNRIDVPYKVVINEGIELAKTFGATDGHKFVNGVL 142
>NUSB_VIBFI (Q8G9G3) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 38.5 bits (88), Expect = 0.018 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +EL +L +++ EM ++ P+KV INEA++LAK F + + +NG L Sbjct: 98 MELALLRMSIYEMMNRDDVPYKVVINEAIELAKVFAAEDSHKFVNGVL 145
>NUSB_STRMU (Q8DSE9) N utilization substance protein B homolog (Protein nusB)| Length = 142 Score = 38.1 bits (87), Expect = 0.023 Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYV 484 +++ +L + + E+ K TP +VA+NE +++AK++ D + + ING L +V Sbjct: 86 LIDKSLLRLGLYEIKYHKETPERVALNEIIEIAKKYSDEKSSKFINGVLSQFV 138
>NUSB_STRP8 (P65585) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 37.7 bits (86), Expect = 0.031 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 457 TP +VA+NE +++AK++ D + + ING L YV + S S Sbjct: 108 TPDRVALNEIIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_STRP6 (Q5XA94) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 37.7 bits (86), Expect = 0.031 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 457 TP +VA+NE +++AK++ D + + ING L YV + S S Sbjct: 108 TPDRVALNEIIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_STRP3 (P65584) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 37.7 bits (86), Expect = 0.031 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTS 457 TP +VA+NE +++AK++ D + + ING L YV + S S Sbjct: 108 TPDRVALNEIIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS 150
>NUSB_LACPL (Q88WM9) N utilization substance protein B homolog (Protein nusB)| Length = 139 Score = 37.4 bits (85), Expect = 0.040 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 633 ELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 +L IL IA E+ P KVA+NEA++L K F D + + ++G L VK+ Sbjct: 84 DLIILRIAFFELQFVDDVPTKVAVNEAIELTKAFSDDRSRKFVSGVLGKVVKN 136
>NUSB_HELHP (Q7VK55) N utilization substance protein B homolog (Protein nusB)| Length = 157 Score = 36.6 bits (83), Expect = 0.068 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFC-DGGAPRVINGCLRTYVKDHMSNGT 460 +E +L + E+ T V INEAV+L K + + APR ING L K H N Sbjct: 79 MERAMLRLGAFEILYTETDTPVIINEAVELGKMYGGEDNAPRFINGVLDALSKAHTKNKK 138 Query: 459 SQ 454 S+ Sbjct: 139 SE 140
>NUSB_BIFLO (Q8G817) N utilization substance protein B homolog (Protein nusB)| Length = 190 Score = 36.2 bits (82), Expect = 0.089 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +++ IL IA E+ + P KVAI+EA+ LAK CD +P I+G L Sbjct: 77 VVDRNILRIAAWEILFTDDVPDKVAIDEALALAKTLCDDDSPAFIHGLL 125
>NUSB_CLOTE (Q894G5) N utilization substance protein B homolog (Protein nusB)| Length = 153 Score = 36.2 bits (82), Expect = 0.089 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 ++L IL + E+ S P VAINE V+LAK++ D +P IN L K Sbjct: 99 VDLAILRLCSYEILFSNEVPDNVAINEGVELAKKYGDDKSPAFINAVLDKIAK 151
>NUSB_BUCAP (Q8K9A2) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL I+ E+ K P+KV+INE ++LAK F + + ING L Sbjct: 82 IEKAILRISFYELYKRKDIPYKVSINEGIELAKLFGSEDSHKFINGVL 129
>NUSB_CLOPE (Q8XJD6) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 + L IL I+ E+ ++ P KV+INEA++L K++ D + ING L K+ Sbjct: 80 VNLSILRISTYEILFAEDVPGKVSINEAIELCKKYSDNKSVSFINGVLDKVYKN 133
>NUSB_CHLTE (Q8KBS4) N utilization substance protein B homolog (Protein nusB)| Length = 164 Score = 35.4 bits (80), Expect = 0.15 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCD-GGAPRVINGCLRTYVKDHMSN 466 I++ IL +A+AE+ + P KV+INEA+++AK+F + + +NG L D + Sbjct: 80 IIDKNILRMALAEILYCEDIPPKVSINEAIEIAKKFSSTDKSSKFVNGILDAIFNDMKAE 139 Query: 465 G 463 G Sbjct: 140 G 140
>NUSB_BUCAI (P57535) N utilization substance protein B homolog (Protein nusB)| Length = 143 Score = 35.0 bits (79), Expect = 0.20 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSKGT-PHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL I+ E+ + P+KV+INE ++LAK F + + ING L Sbjct: 80 IERAILRISFYELHKRNDIPYKVSINEGIELAKLFGSEDSHKFINGVL 127
>NUSB_STRP1 (Q99Y88) N utilization substance protein B homolog (Protein nusB)| Length = 150 Score = 35.0 bits (79), Expect = 0.20 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYV 484 TP +VA+NE +++ K++ D + + ING L YV Sbjct: 108 TPDRVALNEIIEVVKKYSDETSAKFINGLLSQYV 141
>NUSB_THEMA (Q9X286) N utilization substance protein B homolog (Protein nusB)| Length = 142 Score = 34.7 bits (78), Expect = 0.26 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -1 Query: 639 ILELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDH 475 +++ +L +A E+ K P +V I+EA+++AKR+ + + +NG L K+H Sbjct: 79 VVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEH 134
>NUSB_STRA5 (P65581) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 34.7 bits (78), Expect = 0.26 Identities = 12/34 (35%), Positives = 24/34 (70%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYV 484 TP +VA+NE +++AK++ D + + +NG L ++ Sbjct: 107 TPDRVALNEIIEIAKKYSDETSAKFVNGLLSQFI 140
>NUSB_STRA3 (P65580) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 34.7 bits (78), Expect = 0.26 Identities = 12/34 (35%), Positives = 24/34 (70%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYV 484 TP +VA+NE +++AK++ D + + +NG L ++ Sbjct: 107 TPDRVALNEIIEIAKKYSDETSAKFVNGLLSQFI 140
>NUSB_BORPE (Q7VTN3) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.26 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 486 VKD 478 D Sbjct: 140 AAD 142
>NUSB_BORPA (Q7W142) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.26 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 486 VKD 478 D Sbjct: 140 AAD 142
>NUSB_BORBR (Q7WNT2) N utilization substance protein B homolog (Protein nusB)| Length = 154 Score = 34.7 bits (78), Expect = 0.26 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 D P+A + +E IL I E M P+KVAINEAV+LAK F + +NG L Sbjct: 80 DRPLAELSPVEHGILLIGSFELMHHVEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKL 139 Query: 486 VKD 478 D Sbjct: 140 AAD 142
>NUSB_HAEIN (P45150) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 34.3 bits (77), Expect = 0.34 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL +A+ E+ + P+KV INEA+++AK F + + ING L Sbjct: 87 IETAILRLAVYELRFELDVPYKVVINEAIEVAKVFGADESHKYINGVL 134
>NUSB_PASMU (P57868) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 33.5 bits (75), Expect = 0.58 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL +A+ E+ + P+KV INEA+++AK F + + +NG L Sbjct: 87 IEKAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEDSHKYVNGVL 134
>SYE_MYCPE (Q8EU94) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 487 Score = 33.5 bits (75), Expect = 0.58 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 10/72 (13%) Frame = -1 Query: 633 ELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVI----------NGCLRTYV 484 ++ I HI E TP+++AINEA+D+ K G +I N L+ ++ Sbjct: 208 DMLISHIIRGEEHLSNTPYQIAINEALDINKNIVFGHLSVIIDETGKKLSKRNMELKQFI 267 Query: 483 KDHMSNGTSQTA 448 +D+ + G S A Sbjct: 268 EDYKNMGFSPEA 279
>NUSB_BUCBP (P59452) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 33.1 bits (74), Expect = 0.76 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL I+ E+ + P KV INE+++LAK F + + ING L Sbjct: 82 IEKAILRISFFELDKRYDIPFKVTINESIELAKLFGAKDSHKFINGVL 129
>NUSB_CHRVO (Q7NVF2) N utilization substance protein B homolog (Protein nusB)| Length = 149 Score = 33.1 bits (74), Expect = 0.76 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L +A E+T S TP+ V INEA+++ K F + +NG L Sbjct: 80 VERAVLLMAALELTQSPETPYPVIINEAIEITKTFGGTDGHKFVNGVL 127
>NUSB_XANCP (Q8PCM6) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 32.7 bits (73), Expect = 0.99 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L +A E+ + P++V INEA++ AKRF +NG L Sbjct: 95 IERAVLRLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVL 142
>NUSB_XANAC (Q8PPD5) N utilization substance protein B homolog (Protein nusB)| Length = 159 Score = 32.7 bits (73), Expect = 0.99 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E +L +A E+ + P++V INEA++ AKRF +NG L Sbjct: 95 IERAVLRLAAYELLYRQDVPYRVVINEAIETAKRFGSEHGHTYVNGVL 142
>NUSB_PSESM (Q889Q5) N utilization substance protein B homolog (Protein nusB)| Length = 165 Score = 32.7 bits (73), Expect = 0.99 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +EL IL ++ E+ + P++V INE ++LAK + + +NG L Sbjct: 101 IELAILRLSTFELLKRIDVPYRVVINEGIELAKVYGSTDGHKFVNGVL 148
>NUSB_RALSO (Q8Y1H9) N utilization substance protein B homolog (Protein nusB)| Length = 155 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -1 Query: 657 DEPVARI--LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 D PVA + +E L + E+ P+KV INEAV+LAK F + +NG L Sbjct: 83 DRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELAKTFGGVEGYKYVNGVL 139
>NUSB_PSEPK (Q88QH5) N utilization substance protein B homolog (Protein nusB)| Length = 166 Score = 32.3 bits (72), Expect = 1.3 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +EL +L ++ E+ + P++V INE V+LAK F + +NG L Sbjct: 102 VELAVLRLSTWELIKRVDVPYRVVINEGVELAKVFGATDGHKFVNGVL 149
>NUSB_HAEDU (Q7VNQ2) N utilization substance protein B homolog (Protein nusB)| Length = 137 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTSK-GTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL +A E+ + P+KV INE +++AK F + + ING L Sbjct: 80 IERTILRLATYELKYELDVPYKVVINEGIEVAKVFGSDDSHKYINGIL 127
>NUSB_OCEIH (Q8EQ42) N utilization substance protein B homolog (Protein nusB)| Length = 126 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAE-MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +E IL +A+ E M P V+INEA++LA F D + + +NG L Sbjct: 74 VERTILRMAILEIMYIDDIPQNVSINEAIELAHTFGDEQSGKFVNGVL 121
>NUSB_CAUCR (Q9A8J3) N utilization substance protein B homolog (Protein nusB)| Length = 149 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 600 MTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKD 478 M P +V INE V++AK F +G ING L +D Sbjct: 106 MYRSDVPTEVVINEYVEIAKSFFEGPESGFINGALDAIARD 146
>NUSB_STRAW (Q827R4) N utilization substance protein B homolog (Protein nusB)| Length = 144 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 585 TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 TP V ++EAV LAK F +P +NG L Sbjct: 100 TPDAVVLDEAVQLAKEFSTDDSPAFVNGLL 129
>NUSB_MYCLE (Q9CCR9) N utilization substance protein B homolog (Protein nusB)| Length = 190 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++ IL +++ E+ + P VA++EAV+LAK +P +NG L Sbjct: 86 VDRAILRVSIWELLYADDVPEPVAVDEAVELAKELSTDDSPGFVNGLL 133
>NUSB_NEIMB (Q9K0D0) N utilization substance protein B homolog (Protein nusB)| Length = 141 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 660 KDEPVARILELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +DE +E +L A E+++ TP+ V INEA+++ K F + +NG L Sbjct: 71 RDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGIL 126
>NUSB_NEIMA (Q9JVD5) N utilization substance protein B homolog (Protein nusB)| Length = 141 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 660 KDEPVARILELCILHIAMAEMTSKG-TPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +DE +E +L A E+++ TP+ V INEA+++ K F + +NG L Sbjct: 71 RDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGIL 126
>NUSB_LISMO (Q8Y7C6) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/48 (29%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 73 VDLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_LISMF (Q71ZW3) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/48 (29%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 73 VDLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_LISIN (Q92BZ5) N utilization substance protein B homolog (Protein nusB)| Length = 128 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/48 (29%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++L +L +++ E+ P++V++NE++++AK + D + + ING L Sbjct: 73 VDLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVL 120
>NUSB_BACHD (Q9K965) N utilization substance protein B homolog (Protein nusB)| Length = 134 Score = 31.2 bits (69), Expect = 2.9 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMTS-KGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 ++ IL +A+ E+ P V+ NEA++LAK F A R ING L Sbjct: 75 VDRAILRMALYELYYVDDIPKNVSFNEAIELAKAFGGEDAGRFINGVL 122
>NUSB_FUSNN (Q8RII1) N utilization substance protein B homolog (Protein nusB)| Length = 153 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -1 Query: 639 ILELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVK 481 ++E +L +A E K P +V NE ++LAK + + + +NG L K Sbjct: 98 VVERALLIVATYEFIFKNAPIEVIANEIIELAKEYGNEKSYEFVNGILANIEK 150
>NUSB_CLOAB (Q97HC8) N utilization substance protein B homolog (Protein nusB)| Length = 135 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1 Query: 636 LELCILHIAMAEMT-SKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 + + IL +A E+ K P KV+ NEAV+LAK + + + +NG + Sbjct: 78 INITILRMAAYEIFFEKDIPCKVSANEAVELAKSYAEENSFSFVNGVI 125
>SEN54_ASHGO (Q74ZJ5) tRNA-splicing endonuclease subunit SEN54 (tRNA-intron| endonuclease SEN54) Length = 455 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -2 Query: 272 YPQMFNRSRCTT-YVPMMHTRLKQPKGTYYF*QLLHPLNPVIHSMTSVVNFYVNVRLYIS 96 YP + +S ++ + +H+ LK P+ ++ L HPL+ ++H TS Y + +I Sbjct: 200 YPPLSQKSSASSNWFCHIHSWLKTPQNLFHV-PLYHPLHFLLHRYTSSPQLYEELSQHIP 258 Query: 95 ELAAPH 78 PH Sbjct: 259 FKKVPH 264
>RSMB_SYNY3 (P72943) Ribosomal RNA small subunit methyltransferase B (EC| 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) Length = 446 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 Query: 582 PHKVAINEAVDLAKRFCDGGAPRVINGCLRTY 487 P A+N VDLAK G +V+NG LR Y Sbjct: 94 PASAAVNTGVDLAKANGLKGLSKVVNGMLRRY 125
>NUSB_DEIRA (Q9RSQ7) N utilization substance protein B homolog (Protein nusB)| Length = 192 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -1 Query: 633 ELCILHIAMAEMTSKGTPHKVAINEAVDLAKRFCDGGAPRVINGCL 496 +L +L +A E+ PH I AV +A++F + R +NG L Sbjct: 99 DLNVLRLATYELMYTPEPHPPVIESAVRIARKFGGDDSGRFVNGVL 144
>AES_RAT (P63003) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (R-esp1) Length = 197 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 186 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 347 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 348 CASVV 362 CA V+ Sbjct: 89 CAQVL 93
>AES_MOUSE (P63002) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (Grg-5) Length = 197 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 186 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 347 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 348 CASVV 362 CA V+ Sbjct: 89 CAQVL 93
>AES_HUMAN (Q08117) Amino-terminal enhancer of split (Amino enhancer of split)| (GRG protein) (ESP1 protein) (Gp130-associated protein GAM) Length = 197 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%) Frame = +3 Query: 186 IVSTLRLLQASVHHRHIGC---ASGPVKHLRIFLDLHEPSFFNYFQVHHS---IKQLNGI 347 I +LLQA H + C AS + R ++ +E S+ ++H +K+LNGI Sbjct: 29 IKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGI 88 Query: 348 CASVV 362 CA V+ Sbjct: 89 CAQVL 93
>NUSB_LEPIN (Q8F8T8) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 582 PHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSN 466 P V I+EAV+L K F + R +NG L +K+ + + Sbjct: 98 PKNVTIDEAVELTKEFESEESARFVNGVLDAILKNEIKS 136
>NUSB_LEPIC (Q72V97) N utilization substance protein B homolog (Protein nusB)| Length = 138 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 582 PHKVAINEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSN 466 P V I+EAV+L K F + R +NG L +K+ + + Sbjct: 98 PKNVTIDEAVELTKEFESEESARFVNGVLDAILKNEIKS 136
>MURB_RHOS4 (Q3J4L9) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 308 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 528 GGAPRVINGCLRTYVKDHMSNGTSQTAESKP 436 GGA R+ GC +YV DH+ + T E +P Sbjct: 122 GGAVRMNAGCYGSYVADHLIEVRAVTREGRP 152
>SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin)| Length = 803 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +1 Query: 502 SVDHPRSTSITK--PLCQIYRLINGNFVRSSFRCHLCHGNMKD 624 S+DHP+S S+T+ P+ I R++ R +C++ N+ D Sbjct: 376 SLDHPQSPSMTRGGPIIPIARVVIERIARKGEQCNIIPDNVDD 418
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 375 DWQLKLQKHRSHSVVLLNGEPGSS*RSWAR-EDLEISSNV*PVQMHNLCADDA 220 D+ LK S+S+ + GEP + R W R ED++ NV V N +D A Sbjct: 124 DYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVSTQNPGSDVA 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,304,374 Number of Sequences: 219361 Number of extensions: 1789623 Number of successful extensions: 3829 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 3711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3828 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
