>ref|XM_469079.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1596

 Score =  224 bits (113), Expect = 3e-55
 Identities = 188/213 (88%)
 Strand = Plus / Minus

                                                                       
Query: 448 agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 507
           ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 945 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 886

                                                                       
Query: 508 gatcacccgaggagcacctccatcacaaaaccgctttgccagatctaccgcctcattaat 567
           ||| |||||||||||||| |||||||| ||||| ||||||| ||| || ||||| |||||
Sbjct: 885 gattacccgaggagcaccaccatcacagaaccgttttgccaaatccacagcctcgttaat 826

                                                                       
Query: 568 ggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatatgaaggatgca 627
           | ||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 825 gacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatatgaagaataca 766

                                            
Query: 628 gagttcaaggatccttgcaacaggttcatcctt 660
            |||||||||||||||||||||||||| |||||
Sbjct: 765 aagttcaaggatccttgcaacaggttcgtcctt 733

>dbj|AK066416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A14, full
           insert sequence
          Length = 1601

 Score =  224 bits (113), Expect = 3e-55
 Identities = 188/213 (88%)
 Strand = Plus / Minus

                                                                       
Query: 448 agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 507
           ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 953 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 894

                                                                       
Query: 508 gatcacccgaggagcacctccatcacaaaaccgctttgccagatctaccgcctcattaat 567
           ||| |||||||||||||| |||||||| ||||| ||||||| ||| || ||||| |||||
Sbjct: 893 gattacccgaggagcaccaccatcacagaaccgttttgccaaatccacagcctcgttaat 834

                                                                       
Query: 568 ggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatatgaaggatgca 627
           | ||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 833 gacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatatgaagaataca 774

                                            
Query: 628 gagttcaaggatccttgcaacaggttcatcctt 660
            |||||||||||||||||||||||||| |||||
Sbjct: 773 aagttcaaggatccttgcaacaggttcgtcctt 741

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                            
Query: 558      cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 617
                |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 25343830 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 25343771

                                                          
Query: 618      gaaggatgcagagttcaaggatccttgcaacaggttcatcct 659
                |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 25343770 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 25343729



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 448      agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 507
                ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 25344028 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 25343969

                                                         
Query: 508      gatcacccgaggagcacctccatcacaaaaccgctttgcca 548
                ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 25343968 gattacccgaggagcaccaccatcacagaaccgttttgcca 25343928

>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
             sequence
          Length = 152828

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 558   cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 617
             |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 99530 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 99589

                                                       
Query: 618   gaaggatgcagagttcaaggatccttgcaacaggttcatcct 659
             |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 99590 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 99631



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                         
Query: 448   agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 507
             ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 99332 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 99391

                                                      
Query: 508   gatcacccgaggagcacctccatcacaaaaccgctttgcca 548
             ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 99392 gattacccgaggagcaccaccatcacagaaccgttttgcca 99432

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                            
Query: 558      cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 617
                |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 25435139 cctcgttaatgacaattttgtgaggtgttccttttgatgtcatctctgccatggcaatat 25435080

                                                          
Query: 618      gaaggatgcagagttcaaggatccttgcaacaggttcatcct 659
                |||| || || |||||||||||||||||||||||||| ||||
Sbjct: 25435079 gaagaatacaaagttcaaggatccttgcaacaggttcgtcct 25435038



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 448      agctgtctgactagtgccattgctcatgtggtccttcacatatgttcgaaggcatccgtt 507
                ||||| |||||| ||| || || ||||||| ||||||||| |||| ||||||||||| ||
Sbjct: 25435337 agctggctgactggtgtcaatgttcatgtgatccttcacaaatgtccgaaggcatccatt 25435278

                                                         
Query: 508      gatcacccgaggagcacctccatcacaaaaccgctttgcca 548
                ||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 25435277 gattacccgaggagcaccaccatcacagaaccgttttgcca 25435237

>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 558   cctcattaatggcaactttgtgaggagttcctttcgatgtcatctctgccatggcaatat 617
             ||||||| ||| ||||||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 38957 cctcattgatgacaactttgtgaggtgttccttttgatgtcatctctgccatagcaatat 39016

                                                       
Query: 618   gaaggatgcagagttcaaggatccttgcaacaggttcatcct 659
             | || |||||||| ||||| |||||||| ||||| |||||||
Sbjct: 39017 gtagaatgcagagctcaagtatccttgccacaggctcatcct 39058



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 479   tccttcacatatgttcgaaggcatccgttgatcacccgaggagcacctccatcacaaaac 538
             ||||| ||| |||||||||||||||| || || |||||||| ||||| ||||||||||| 
Sbjct: 38737 tcctttacaaatgttcgaaggcatccattaattacccgaggggcaccaccatcacaaaat 38796

                                   
Query: 539   cgctttgccagatctaccgcct 560
             ||||||||||||||||| ||||
Sbjct: 38797 cgctttgccagatctactgcct 38818

>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 419    tatttacagaaactttatggct 440
              ||||||||||||||||||||||
Sbjct: 907957 tatttacagaaactttatggct 907978

>gb|AC140679.4| Mus musculus BAC clone RP24-511M8 from 1, complete sequence
          Length = 176052

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 604   tgccatggcaatatgaaggatgcaga 629
             ||||||||||| ||||||||||||||
Sbjct: 27111 tgccatggcaagatgaaggatgcaga 27086

>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 604    tgccatggcaatatgaaggatgcaga 629
              ||||||||||| ||||||||||||||
Sbjct: 189171 tgccatggcaagatgaaggatgcaga 189146

>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence
          Length = 261450

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   catgtatcttacaaatatcct 38
            |||||||||||||||||||||
Sbjct: 4134 catgtatcttacaaatatcct 4154

>emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 in linkage group 1,
              complete sequence
          Length = 148678

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 410    tgtaatacatatttacagaaa 430
              |||||||||||||||||||||
Sbjct: 102762 tgtaatacatatttacagaaa 102742

>emb|AL662874.9| Human DNA sequence from clone RP13-24G8 on chromosome X Contains a
             novel gene, a delta sleep inducing peptide, immunoreactor
             (DSIPI) pseudogene, the PABPC5 gene for poly(A) binding
             protein, cytoplasmic 5 and a CpG island, complete sequence
          Length = 160906

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   aaaagtttacaacacttgtca 142
             |||||||||||||||||||||
Sbjct: 71442 aaaagtttacaacacttgtca 71462

>emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on chromosome 6 Contains part
             of the BAI3 gene for brain-specific angiogenesis inhibitor
             3, complete sequence
          Length = 127079

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tcttacattcacataaaagtt 128
             |||||||||||||||||||||
Sbjct: 10813 tcttacattcacataaaagtt 10793

>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence
          Length = 96984

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    catgtatcttacaaatatcct 38
             |||||||||||||||||||||
Sbjct: 92851 catgtatcttacaaatatcct 92831

>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete
             sequence
          Length = 176708

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    gtatcttacaaatatcctctc 41
             |||||||||||||||||||||
Sbjct: 67948 gtatcttacaaatatcctctc 67968

>dbj|AB084898.1| Sorghum bicolor ALDH2b mRNA for mitochondrial aldehyde
           dehydrogenase, complete cds
          Length = 2159

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 558 cctcattaatggcaactttgt 578
           |||||||||||||||||||||
Sbjct: 429 cctcattaatggcaactttgt 449

>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced
          Length = 90756

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   ttaaacatttgaggatattt 275
             ||||||||||||||||||||
Sbjct: 19179 ttaaacatttgaggatattt 19198

>gb|AY616680.1| Danio rerio elastase A gene, promoter region
          Length = 2875

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  ttacagaaactttatggctt 441
            ||||||||||||||||||||
Sbjct: 1615 ttacagaaactttatggctt 1596

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 591     tcgatgtcatctctgccatg 610
               ||||||||||||||||||||
Sbjct: 4426378 tcgatgtcatctctgccatg 4426397

>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    aactttatggctttgattca 448
              ||||||||||||||||||||
Sbjct: 109575 aactttatggctttgattca 109556

>gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, complete sequence
          Length = 176593

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   aatatgaaggatgcagagtt 632
             ||||||||||||||||||||
Sbjct: 39856 aatatgaaggatgcagagtt 39875

>emb|BX255910.3| Mouse DNA sequence from clone RP23-398G11 on chromosome 11 Contains a
              novel gene and the 3' end of the gene for a novel protein
              (E030025D05Rik), complete sequence
          Length = 179386

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ttcacataaaagtttacaac 134
              ||||||||||||||||||||
Sbjct: 112556 ttcacataaaagtttacaac 112575

>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete
              sequence
          Length = 156095

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tacaatcttacattcacata 122
              ||||||||||||||||||||
Sbjct: 155196 tacaatcttacattcacata 155215

>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence
          Length = 173580

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 613   aatatgaaggatgcagagtt 632
             ||||||||||||||||||||
Sbjct: 40504 aatatgaaggatgcagagtt 40485

>emb|BX510923.8| Zebrafish DNA sequence from clone CH211-214J8 in linkage group 5,
              complete sequence
          Length = 165838

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ttacagaaactttatggctt 441
              ||||||||||||||||||||
Sbjct: 144409 ttacagaaactttatggctt 144390

>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tagaaatagtaagtaccctt 200
              ||||||||||||||||||||
Sbjct: 649174 tagaaatagtaagtaccctt 649193

>gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence
          Length = 175644

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    catatttacagaaactttat 436
              ||||||||||||||||||||
Sbjct: 100391 catatttacagaaactttat 100372

>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  ttaaacatttgaggatattt 275
            ||||||||||||||||||||
Sbjct: 1542 ttaaacatttgaggatattt 1523

>gb|AC092461.6| Homo sapiens BAC clone RP11-232I22 from 2, complete sequence
          Length = 39674

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   ttaaacatttgaggatattt 275
             ||||||||||||||||||||
Sbjct: 39216 ttaaacatttgaggatattt 39197

>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   acagaaactttatggctttg 443
             ||||||||||||||||||||
Sbjct: 88666 acagaaactttatggctttg 88647

>emb|AL929202.6| Zebrafish DNA sequence from clone DKEY-147L19, complete sequence
          Length = 105855

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  tacaatcttacattcacata 122
            ||||||||||||||||||||
Sbjct: 1101 tacaatcttacattcacata 1120

>gb|AF027335.1|AF027335 Equus caballus prostaglandin G/H synthase-2 gene, promoter and
            complete cds
          Length = 8479

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  cattcaataaaacaactgaa 340
            ||||||||||||||||||||
Sbjct: 3019 cattcaataaaacaactgaa 3000

>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE
          Length = 133229

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 429  aactttatggctttgattca 448
            ||||||||||||||||||||
Sbjct: 4706 aactttatggctttgattca 4687

>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592,
            complete sequence
          Length = 96561

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  aactttatggctttgattca 448
            ||||||||||||||||||||
Sbjct: 9195 aactttatggctttgattca 9214

>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b,
             complete sequence
          Length = 77452

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   aactttatggctttgattca 448
             ||||||||||||||||||||
Sbjct: 29455 aactttatggctttgattca 29436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,675,843
Number of Sequences: 3902068
Number of extensions: 5675843
Number of successful extensions: 99771
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99607
Number of HSP's gapped (non-prelim): 164
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)