ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6a19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L33252.1|BLYPDIC Hordeum vulgare disulfide isomerase (PDI) mRNA, 3' end Length = 1191 Score = 761 bits (384), Expect = 0.0 Identities = 402/406 (99%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1092 taactaagtacacgactgaag-atttgttacagtatttctcgcaacggg-atacagtatc 1035 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 975 Query: 121 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 915 Query: 181 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 855 Query: 241 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 795 Query: 301 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 735 Query: 361 ggtcnggtaaccctggacatcaaactcgcccggcacgtcattctcg 406 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 ggtcgggtaaccctggacatcaaactcgcccggcacgtcattctcg 689
>gb|L33251.1|BLYPDIB Hordeum vulgare disulfide isomerase (PDI) mRNA, complete cds Length = 1772 Score = 761 bits (384), Expect = 0.0 Identities = 402/406 (99%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1750 taactaagtacacgactgaag-atttgttacagtatttctcgcaacggg-atacagtatc 1693 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 1633 Query: 121 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1632 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 1573 Query: 181 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1572 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 1513 Query: 241 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 1453 Query: 301 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1452 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 1393 Query: 361 ggtcnggtaaccctggacatcaaactcgcccggcacgtcattctcg 406 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 ggtcgggtaaccctggacatcaaactcgcccggcacgtcattctcg 1347
>gb|L33250.1|BLYPDIA Hordeum vulgare disulfide isomerase (PDI) mRNA, complete cds Length = 1816 Score = 761 bits (384), Expect = 0.0 Identities = 402/406 (99%), Gaps = 2/406 (0%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1739 taactaagtacacgactgaag-atttgttacagtatttctcgcaacggg-atacagtatc 1682 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccctcgcaaaatctgg 1622 Query: 121 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 cgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaaa 1562 Query: 181 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 gactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctc 1502 Query: 241 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 ggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctc 1442 Query: 301 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 gtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacag 1382 Query: 361 ggtcnggtaaccctggacatcaaactcgcccggcacgtcattctcg 406 |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 ggtcgggtaaccctggacatcaaactcgcccggcacgtcattctcg 1336
>gb|AY544169.1| Aegilops tauschii protein disulfide isomerase (PDI4D) gene, complete cds Length = 3526 Score = 537 bits (271), Expect = e-150 Identities = 375/407 (92%), Gaps = 5/407 (1%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| ||||| | || |||||||||||||||| ||||||| |||||||||| Sbjct: 3519 taactaggtacaccactgacggatttgttacagtatttctctcaacggg-atacagtatc 3461 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccc-tcgcaaaatctg 119 |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| Sbjct: 3460 aggcaaaaccggggccaacacatccaacgaccaactctcgtccccccctcgcaaaatctg 3401 Query: 120 gcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaa 179 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3400 gcgttggaagctgccttgccaaaacatgtttccccctcctctacctgtctgctgctagac 3341 Query: 180 agactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttct 239 |||| | |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 3340 agaccgatgctcagagctcgtccttcagaggctcggtggcagccggttccgccgccttct 3281 Query: 240 cggt---cgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 |||| |||||| |||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 3280 cggtgtccgccgcagccgcctgcccagcagtctccttgttcttcttgatgtagtctacga 3221 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct: 3220 tctcgtcggccgtcctgccgccctcgtacgagaccttcttcccgctgggagtgacgaagt 3161 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 ||||||| |||||||||||||||| ||||| | |||||||||||| Sbjct: 3160 acagggtggggtaaccctggacatcgaactcactgggcacgtcattc 3114
>gb|AF262981.1|AF262981 Triticum aestivum protein disulfide isomerase 3 precursor (PDI3) mRNA, complete cds Length = 1862 Score = 537 bits (271), Expect = e-150 Identities = 375/407 (92%), Gaps = 5/407 (1%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| ||||| | || |||||||||||||||||||||||| |||||| ||| Sbjct: 1770 taactaggtacaccactgacggatttgttacagtatttctcgcaacggg-atacagaatc 1712 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccc-tcgcaaaatctg 119 |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| Sbjct: 1711 aggcaaaaccggggccaacacatccaacgaccaactctcgtccccccctcgcaaaatctg 1652 Query: 120 gcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaa 179 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1651 gcgttggaagctgccttgccaaaacatgtttccccctcctctacctgtctgctgctagac 1592 Query: 180 agactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttct 239 |||| | |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1591 agaccgatgctcagagctcgtccttcagaggctcggtggcagccggttccgccgccttct 1532 Query: 240 cggt---cgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 |||| |||||| |||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1531 cggtgtccgccgcagccgcctgcccagcagtctccttgttcttcttgatgtagtctacga 1472 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct: 1471 tctcgtcggccgtcctgccgccctcgtacgagaccttcttcccgctgggagtgacgaagt 1412 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 ||||||| |||||||||||||||| ||||| | |||||||||||| Sbjct: 1411 acagggtggggtaaccctggacatcgaactcactgggcacgtcattc 1365
>gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isomerase 1 precursor (PDI1) mRNA, complete cds Length = 1784 Score = 529 bits (267), Expect = e-147 Identities = 374/407 (91%), Gaps = 5/407 (1%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| ||||| | || |||||||||||||||||||||||| | |||||||| Sbjct: 1762 taactaggtacaccactgatggatttgttacagtatttctcgcaacgggaa-acagtatc 1704 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccc-tcgcaaaatctg 119 |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| Sbjct: 1703 aggcaaaaccggggccaacacaaccaacaaccaactctcgtccccccctcgcaaaatctg 1644 Query: 120 gcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaa 179 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 1643 gcgttggaagctgccttgccaaaacatgtttccccctcctctacctgtctgctgctagca 1584 Query: 180 agactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttct 239 |||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||| Sbjct: 1583 agactgatgctcagagctcgtccttcagaggctcggtggcagccggttcagctgccttct 1524 Query: 240 cggtcgccgcc---gccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| || | Sbjct: 1523 cggtcgccgccgctgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaa 1464 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1463 tctcgtcggccgtcctgccgccctcatacgagaccttcttcccgctaggagtgacgaagt 1404 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 1403 agagggtggggtaaccctggacatcaaactcgccgggaacgtcattc 1357
>gb|U11496.1|TAU11496 Triticum aestivum Chinese spring protein disulfide isomerase (PDI) mRNA, complete cds Length = 1796 Score = 529 bits (267), Expect = e-147 Identities = 374/407 (91%), Gaps = 5/407 (1%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| ||||| | || |||||||||||||||||||||||| | |||||||| Sbjct: 1773 taactaggtacaccactgatggatttgttacagtatttctcgcaacgggaa-acagtatc 1715 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccc-tcgcaaaatctg 119 |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| Sbjct: 1714 aggcaaaaccggggccaacacaaccaacaaccaactctcgtccccccctcgcaaaatctg 1655 Query: 120 gcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaa 179 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 1654 gcgttggaagctgccttgccaaaacatgtttccccctcctctacctgtctgctgctagca 1595 Query: 180 agactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttct 239 |||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||| Sbjct: 1594 agactgatgctcagagctcgtccttcagaggctcggtggcagccggttcagctgccttct 1535 Query: 240 cggtcgccgcc---gccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| || | Sbjct: 1534 cggtcgccgccgctgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaa 1475 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1474 tctcgtcggccgtcctgccgccctcatacgagaccttcttcccgctaggagtgacgaagt 1415 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 1414 agagggtggggtaaccctggacatcaaactcgccgggaacgtcattc 1368
>gb|AY544170.1| Triticum turgidum subsp. durum protein disulfide isomerase (PDI4A) gene, exons 7 through 10 and partial cds Length = 1100 Score = 521 bits (263), Expect = e-145 Identities = 373/407 (91%), Gaps = 5/407 (1%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| ||||| | || |||||||||||||||||||||||| | |||||||| Sbjct: 1093 taactaggtacaccactgatggatttgttacagtatttctcgcaacgggaa-acagtatc 1035 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgacccccc-tcgcaaaatctg 119 |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| Sbjct: 1034 aggcaaaaccggggccaacacaaccaacaaccaactctcgtccccccctcgcaaaatctg 975 Query: 120 gcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgctagaa 179 ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 974 gcgttggaagccgccttgccaaaacatgtttccccctcctctacctgtctgctgctagca 915 Query: 180 agactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgccttct 239 |||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||| Sbjct: 914 agactgatgctcagagctcgtccttcagaggctcggtggcagccggttcagctgccttct 855 Query: 240 cggtcgccgcc---gccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| || | Sbjct: 854 cggtcgccgccgctgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaa 795 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 794 tctcgtcggccgtcctgccgccctcatacgagaccttcttcccgctaggagtgacgaagt 735 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 734 agagggtggggtaaccctggacatcaaactcgccgggaacgtcattc 688
>emb|AJ868107.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide isomerase (PDI gene), clone CPDI-4D Length = 1745 Score = 517 bits (261), Expect = e-144 Identities = 354/382 (92%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 1744 tgttacagtatttctcgcaacggg-atacagaatcaggcaaaaccggggccaacacatcc 1686 Query: 86 aacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaaac 144 ||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 1685 aacgaccaactctcgtccccccctcgcaaaatctggcgttggaagctgccttgccaaaac 1626 Query: 145 atgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcctt 204 |||||||||| ||||||||||||||||||||||| |||| | |||||||||||| ||||| Sbjct: 1625 atgtttccccctcctctacctgtctgctgctagacagaccgatgctcagagctcgtcctt 1566 Query: 205 caaaggctcggtggcagccggttccgccgccttctcggt---cgccgccgccgcctgccc 261 || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1565 cagaggctcggtggcagccggttccgccgccttctcggtgtccgccgcagccgcctgccc 1506 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 ||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| Sbjct: 1505 agcagtctccttgttcttcttgatgtagtctacaatctcgtcggccgtcctgccgccctc 1446 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1445 gtacgagaccttcttcccgctgggagtgacgaagtacagggtggggtaaccctggacatc 1386 Query: 382 aaactcgcccggcacgtcattc 403 ||||| | |||||||||||| Sbjct: 1385 gaactcactgggcacgtcattc 1364
>emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide isomerase (PDI gene), clone CPDI-4A Length = 1745 Score = 517 bits (261), Expect = e-144 Identities = 354/382 (92%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || Sbjct: 1744 tgttacagtatttctcgcaacgggaa-acagtatcaggcaaaaccggggccaacacaacc 1686 Query: 86 aacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaaac 144 ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 1685 aacaaccaactctcgtccccccctcgcaaaatctggcgttggaagctgccttgccaaaac 1626 Query: 145 atgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcctt 204 |||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 1625 atgtttccccctcctctacctgtctgctgctagcaagactgatgctcagagctcgtcctt 1566 Query: 205 caaaggctcggtggcagccggttccgccgccttctcggtcgccgcc---gccgcctgccc 261 || ||||||||||||||||||||| || |||||||||||||||||| ||||||||||| Sbjct: 1565 cagaggctcggtggcagccggttcagctgccttctcggtcgccgccgctgccgcctgccc 1506 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 |||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| Sbjct: 1505 ggcagtctccttgttcttcttgatgtagtcgacaatctcgtcggccgtcctgccgccctc 1446 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 1445 atacgagaccttcttcccgctaggagtgacgaagtagagggtggggtaaccctggacatc 1386 Query: 382 aaactcgcccggcacgtcattc 403 ||||||||| || ||||||||| Sbjct: 1385 aaactcgccgggaacgtcattc 1364
>emb|AJ868104.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide isomerase, exons 1-10, clone GPDI-4D Length = 3466 Score = 517 bits (261), Expect = e-144 Identities = 354/382 (92%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 3465 tgttacagtatttctcgcaacggg-atacagaatcaggcaaaaccggggccaacacatcc 3407 Query: 86 aacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaaac 144 ||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 3406 aacgaccaactctcgtccccccctcgcaaaatctggcgttggaagctgccttgccaaaac 3347 Query: 145 atgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcctt 204 |||||||||| ||||||||||||||||||||||| |||| | |||||||||||| ||||| Sbjct: 3346 atgtttccccctcctctacctgtctgctgctagacagaccgatgctcagagctcgtcctt 3287 Query: 205 caaaggctcggtggcagccggttccgccgccttctcggt---cgccgccgccgcctgccc 261 || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 3286 cagaggctcggtggcagccggttccgccgccttctcggtgtccgccgcagccgcctgccc 3227 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 ||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| Sbjct: 3226 agcagtctccttgttcttcttgatgtagtctacaatctcgtcggccgtcctgccgccctc 3167 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 3166 gtacgagaccttcttcccgctgggagtgacgaagtacagggtggggtaaccctggacatc 3107 Query: 382 aaactcgcccggcacgtcattc 403 ||||| | |||||||||||| Sbjct: 3106 gaactcactgggcacgtcattc 3085
>emb|AJ868102.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide isomerase, exons 1-10, clone GPDI-4A Length = 3561 Score = 517 bits (261), Expect = e-144 Identities = 354/382 (92%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || Sbjct: 3560 tgttacagtatttctcgcaacgggaa-acagtatcaggcaaaaccggggccaacacaacc 3502 Query: 86 aacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaaac 144 ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 3501 aacaaccaactctcgtccccccctcgcaaaatctggcgttggaagctgccttgccaaaac 3442 Query: 145 atgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcctt 204 |||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct: 3441 atgtttccccctcctctacctgtctgctgctagcaagactgatgctcagagctcgtcctt 3382 Query: 205 caaaggctcggtggcagccggttccgccgccttctcggtcgccgcc---gccgcctgccc 261 || ||||||||||||||||||||| || |||||||||||||||||| ||||||||||| Sbjct: 3381 cagaggctcggtggcagccggttcagctgccttctcggtcgccgccgctgccgcctgccc 3322 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 |||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| Sbjct: 3321 ggcagtctccttgttcttcttgatgtagtcgacaatctcgtcggccgtcctgccgccctc 3262 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 3261 atacgagaccttcttcccgctaggagtgacgaagtagagggtggggtaaccctggacatc 3202 Query: 382 aaactcgcccggcacgtcattc 403 ||||||||| || ||||||||| Sbjct: 3201 aaactcgccgggaacgtcattc 3180
>gb|AY544171.1| Triticum turgidum subsp. durum protein disulfide isomerase (PDI4B) gene, exons 7 through 10 and partial cds Length = 1061 Score = 446 bits (225), Expect = e-122 Identities = 362/407 (88%), Gaps = 11/407 (2%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| || || | || |||||||||||||||||||||||| |||||||||| Sbjct: 1054 taactaggtacaccacggacggatttgttacagtatttctcgcaacggg-atacagtatc 996 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgac----ccccctcgcaaaat 116 |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| Sbjct: 995 aggcaaaaccggggacaacacatccaacaaccaactctcgtcttaaccccctcgcaaaat 936 Query: 117 ctggcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgcta 176 |||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 935 ctggcgttggaagctgccttgccaaaacatatttccccctcccctacctgtctgctgcta 876 Query: 177 gaaagactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgcct 236 | || |||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| Sbjct: 875 gcaacactgatgctcagagctcgtccttcagaggctccgtggcagccggttccgccgcct 816 Query: 237 tctcggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||| |||||||||||| |||||||||||||||||| |||||||||| || | Sbjct: 815 tctcggt------cgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaa 762 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 |||| |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 761 tctcatcggccgtcctgccgccctcgtaggagaccttctttccgctgggagtgacgaagt 702 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| |||||||||||||||| ||||| | |||||||||||| Sbjct: 701 agagggtggggtaaccctggacatcgaactcactgggcacgtcattc 655
>emb|AJ868106.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide isomerase (PDI gene), clone CPDI-4B Length = 1739 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 11/382 (2%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1738 tgttacagtatttctcgcaacggg-atacagtatcaggcaaaaccggggacaacacatcc 1680 Query: 86 aacaaccaactctcgac----ccccctcgcaaaatctggcgttggaatctgccttgccaa 141 ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| Sbjct: 1679 aacaaccaactctcgtcttaaccccctcgcaaaatctggcgttggaagctgccttgccaa 1620 Query: 142 aacatgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatc 201 ||||| ||||||| ||| |||||||||||||||||| || |||| |||||||||||| || Sbjct: 1619 aacatatttccccctcccctacctgtctgctgctagcaacactgatgctcagagctcgtc 1560 Query: 202 cttcaaaggctcggtggcagccggttccgccgccttctcggtcgccgccgccgcctgccc 261 ||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1559 cttcagaggctccgtggcagccggttccgccgccttctcggt------cgccgcctgccc 1506 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 |||||||||||||||||| |||||||||| || ||||| |||||||||||||| ||||| Sbjct: 1505 ggcagtctccttgttcttcttgatgtagtcgacaatctcatcggccgtcctgccgccctc 1446 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1445 gtaggagaccttctttccgctgggagtgacgaagtagagggtggggtaaccctggacatc 1386 Query: 382 aaactcgcccggcacgtcattc 403 ||||| | |||||||||||| Sbjct: 1385 gaactcactgggcacgtcattc 1364
>emb|AJ868103.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide isomerase, exons 1-10, clone GPDI-4B Length = 3527 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 11/382 (2%) Strand = Plus / Minus Query: 26 tgttacagtatttctcgcaacgggtatacagtatcaggcaaaaccggggccaacacatcc 85 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 3526 tgttacagtatttctcgcaacggg-atacagtatcaggcaaaaccggggacaacacatcc 3468 Query: 86 aacaaccaactctcgac----ccccctcgcaaaatctggcgttggaatctgccttgccaa 141 ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| Sbjct: 3467 aacaaccaactctcgtcttaaccccctcgcaaaatctggcgttggaagctgccttgccaa 3408 Query: 142 aacatgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatc 201 ||||| ||||||| ||| |||||||||||||||||| || |||| |||||||||||| || Sbjct: 3407 aacatatttccccctcccctacctgtctgctgctagcaacactgatgctcagagctcgtc 3348 Query: 202 cttcaaaggctcggtggcagccggttccgccgccttctcggtcgccgccgccgcctgccc 261 ||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3347 cttcagaggctccgtggcagccggttccgccgccttctcggt------cgccgcctgccc 3294 Query: 262 agcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctc 321 |||||||||||||||||| |||||||||| || ||||| |||||||||||||| ||||| Sbjct: 3293 ggcagtctccttgttcttcttgatgtagtcgacaatctcatcggccgtcctgccgccctc 3234 Query: 322 ataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatc 381 || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 3233 gtaggagaccttctttccgctgggagtgacgaagtagagggtggggtaaccctggacatc 3174 Query: 382 aaactcgcccggcacgtcattc 403 ||||| | |||||||||||| Sbjct: 3173 gaactcactgggcacgtcattc 3152
>gb|AF262980.1|AF262980 Triticum aestivum protein disulfide isomerase 2 precursor (PDI2) mRNA, complete cds Length = 1832 Score = 440 bits (222), Expect = e-120 Identities = 361/407 (88%), Gaps = 12/407 (2%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| || || | || ||||||||||||||||||||||| |||||||||| Sbjct: 1765 taactaggtacaccacggacggatttgttacagtatttctcgcaacgg--atacagtatc 1708 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgac----ccccctcgcaaaat 116 |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1707 aggcaaaaccggggacaacacatccaacaaccaactctcgtcttaaccccctcgcaaaat 1648 Query: 117 ctggcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgcta 176 |||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 1647 ctggcgttggaagctgccttgccaaaacatatttccccctcccctacctgtctgctgcta 1588 Query: 177 gaaagactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgcct 236 | || |||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| Sbjct: 1587 gcaacactgatgctcagagctcgtccttcagaggctccgtggcagccggttccgccgcct 1528 Query: 237 tctcggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||| |||||||||||| |||||||||||||||||| |||||||||| || | Sbjct: 1527 tctcggt------cgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaa 1474 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 |||| |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1473 tctcatcggccgtcctgccgccctcgtaggagaccttctttccgctgggagtgacgaagt 1414 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| |||||||||||||||| ||||| | |||||||||||| Sbjct: 1413 agagggtggggtaaccctggacatcgaactcactgggcacgtcattc 1367
>emb|X79306.1|TAISOM T.aestivum mRNA for isomerase Length = 1246 Score = 438 bits (221), Expect = e-120 Identities = 361/407 (88%), Gaps = 11/407 (2%) Strand = Plus / Minus Query: 1 taactaagtacacgactgaagcatntgttacagtatttctcgcaacgggtatacagtatc 60 |||||| |||||| || || | || |||||||||||||||||||||||| |||||||||| Sbjct: 1167 taactaggtacaccacggacggatttgttacagtatttctcgcaacggg-atacagtatc 1109 Query: 61 aggcaaaaccggggccaacacatccaacaaccaactctcgac----ccccctcgcaaaat 116 |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1108 aggcaaaaccggggacaacacatccaacaaccaactctcgtcttaaccccctcgcaaaat 1049 Query: 117 ctggcgttggaatctgccttgccaaaacatgtttccccatcctctacctgtctgctgcta 176 |||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 1048 ctggcgttggaagctgccttgccaaaacatatttccccctcccctacctgtctgctgcta 989 Query: 177 gaaagactgttgctcagagctcatccttcaaaggctcggtggcagccggttccgccgcct 236 | || |||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| Sbjct: 988 gcaacactgatgctcagagctcgtccttcagaggctccgtggcagccggttccgccgcct 929 Query: 237 tctcggtcgccgccgccgcctgcccagcagtctccttgttcttcctgatgtagtcaacga 296 ||||||| |||||||||||| ||||||||||||||||| |||||||||| || | Sbjct: 928 tctcggt------cgccgcctgcccgacagtctccttgttcttcttgatgtagtcgacaa 875 Query: 297 tctcgtcggccgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagt 356 |||| |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| Sbjct: 874 tctcatcggccgtcctgccgccctcgtaggagaccttctttccgctgggagtgacgaagt 815 Query: 357 acagggtcnggtaaccctggacatcaaactcgcccggcacgtcattc 403 | ||||| |||||||||||||||| ||||| | |||||||||||| Sbjct: 814 agagggtggggtaaccctggacatcgaactcactgggcacgtcattc 768
>gb|AY544180.1|AY544177S4 Triticum aestivum protein disulfide isomerase (PDI4D) gene, exons 7 through 10 and partial cds Length = 965 Score = 428 bits (216), Expect = e-117 Identities = 283/305 (92%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 102 cccccctcgcaaaatctggcgttggaatctgccttgccaaaacatgtttccccatcctct 161 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 959 cccccctcgcaaaatctggcgttggaagctgccttgccaaaacatgtttccccctcctct 900 Query: 162 acctgtctgctgctagaaagactgttgctcagagctcatccttcaaaggctcggtggcag 221 ||||||||||||||||| |||| | |||||||||||| ||||||| |||||||||||||| Sbjct: 899 acctgtctgctgctagacagaccgatgctcagagctcgtccttcagaggctcggtggcag 840 Query: 222 ccggttccgccgccttctcggt---cgccgccgccgcctgcccagcagtctccttgttct 278 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 839 ccggttccgccgccttctcggtgtccgccgcagccgcctgcccagcagtctccttgttct 780 Query: 279 tcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataagagaccttcttcc 338 || |||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 779 tcttgatgtagtctacgatctcgtcggccgtcctgccgccctcgtacgagaccttcttcc 720 Query: 339 cgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaactcgcccggcacgt 398 ||||||||||||||||||||||||| |||||||||||||||| ||||| | ||||||| Sbjct: 719 cgctgggagtgacgaagtacagggtggggtaaccctggacatcgaactcactgggcacgt 660 Query: 399 cattc 403 ||||| Sbjct: 659 cattc 655
>emb|AJ277379.1|TTU277379 Triticum turgidum subsp. durum mRNA for protein disulfide isomerase (Pdi gene), clone pPDICW1V Length = 1659 Score = 426 bits (215), Expect = e-116 Identities = 298/324 (91%), Gaps = 4/324 (1%) Strand = Plus / Minus Query: 84 ccaacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaa 142 ||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 1656 ccaacaaccaactctcgtccccccctcgcaaaatctggcgttggaagccgccttgccaaa 1597 Query: 143 acatgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcc 202 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||| Sbjct: 1596 acatgtttccccctcctctacctgtctgctgctagcaagactgatgctcagagctcgtcc 1537 Query: 203 ttcaaaggctcggtggcagccggttccgccgccttctcggtcgccgcc---gccgcctgc 259 |||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 1536 ttcagaggctcggtggcagccggttcagctgccttctcggtcgccgccgctgccgcctgc 1477 Query: 260 ccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccc 319 || |||||||||||||||||| |||||||||| || |||||||||||||||||||| ||| Sbjct: 1476 ccggcagtctccttgttcttcttgatgtagtcgacaatctcgtcggccgtcctgccgccc 1417 Query: 320 tcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggaca 379 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 1416 tcatacgagaccttcttcccgctaggagtgacgaagtagagggtggggtaaccctggaca 1357 Query: 380 tcaaactcgcccggcacgtcattc 403 ||||||||||| || ||||||||| Sbjct: 1356 tcaaactcgccgggaacgtcattc 1333
>emb|AJ277377.1|TTU277377 Triticum turgidum subsp. durum Pdi gene for protein disulfide isomerase, exons 1-10, clone pPDIGW1VT Length = 3476 Score = 426 bits (215), Expect = e-116 Identities = 298/324 (91%), Gaps = 4/324 (1%) Strand = Plus / Minus Query: 84 ccaacaaccaactctcgacccccc-tcgcaaaatctggcgttggaatctgccttgccaaa 142 ||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 3473 ccaacaaccaactctcgtccccccctcgcaaaatctggcgttggaagccgccttgccaaa 3414 Query: 143 acatgtttccccatcctctacctgtctgctgctagaaagactgttgctcagagctcatcc 202 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||| Sbjct: 3413 acatgtttccccctcctctacctgtctgctgctagcaagactgatgctcagagctcgtcc 3354 Query: 203 ttcaaaggctcggtggcagccggttccgccgccttctcggtcgccgcc---gccgcctgc 259 |||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 3353 ttcagaggctcggtggcagccggttcagctgccttctcggtcgccgccgctgccgcctgc 3294 Query: 260 ccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccc 319 || |||||||||||||||||| |||||||||| || |||||||||||||||||||| ||| Sbjct: 3293 ccggcagtctccttgttcttcttgatgtagtcgacaatctcgtcggccgtcctgccgccc 3234 Query: 320 tcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggaca 379 ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 3233 tcatacgagaccttcttcccgctaggagtgacgaagtagagggtggggtaaccctggaca 3174 Query: 380 tcaaactcgcccggcacgtcattc 403 ||||||||||| || ||||||||| Sbjct: 3173 tcaaactcgccgggaacgtcattc 3150
>gb|AF475106.1| Triticum aestivum protein disulfide isomerase mRNA, partial cds Length = 327 Score = 278 bits (140), Expect = 1e-71 Identities = 198/217 (91%), Gaps = 3/217 (1%) Strand = Plus / Minus Query: 190 tcagagctcatccttcaaaggctcggtggcagccggttccgccgccttctcggtcgccgc 249 ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 327 tcagagctcgtccttcagaggctcggtggcagccggttcagctgccttctcggtcgccgc 268 Query: 250 cgc---cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggc 306 ||| ||||||||| |||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 267 cgctgccgcctgcccggcagtctccttgttcttcttgatgtagtcgacaatctcgtcggc 208 Query: 307 cgtcctgccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcng 366 ||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||| | Sbjct: 207 cgtcctgccgccctcatacgagaccttcttcccgctaggagtgacgaagtagagggtggg 148 Query: 367 gtaaccctggacatcaaactcgcccggcacgtcattc 403 |||||||||||||||||||||||| || ||||||||| Sbjct: 147 gtaaccctggacatcaaactcgccgggaacgtcattc 111
>gb|AY544173.1|AY544172S2 Triticum aestivum protein disulfide isomerase (PDI4A) gene, exons 8 through 10 and partial cds Length = 458 Score = 107 bits (54), Expect = 3e-20 Identities = 71/77 (92%) Strand = Plus / Minus Query: 327 agaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaact 386 |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 458 agaccttcttcccgctaggagtgacgaagtagagggtggggtaaccctggacatcaaact 399 Query: 387 cgcccggcacgtcattc 403 |||| || ||||||||| Sbjct: 398 cgccgggaacgtcattc 382
>gb|AY544176.1|AY544174S3 Triticum aestivum protein disulfide isomerase (PDI4B) gene, exons 7 through 10 and partial cds Length = 638 Score = 93.7 bits (47), Expect = 4e-16 Identities = 70/78 (89%) Strand = Plus / Minus Query: 326 gagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaac 385 ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| Sbjct: 634 gagaccttctttccgctgggagtgacgaagtagagggtggggtaaccctggacatcgaac 575 Query: 386 tcgcccggcacgtcattc 403 || | |||||||||||| Sbjct: 574 tcactgggcacgtcattc 557
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 253 cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcct 312 |||||| ||||| || |||||||||||| | ||| |||| |||||||||||||| ||||| Sbjct: 52936 cgcctgaccagcggtttccttgttcttcttaatgaagtcgacgatctcgtcggctgtcct 52877 Query: 313 gccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaacc 372 ||| | ||||| | ||| |||| || ||||| ||||||||||||||||| ||||||| Sbjct: 52876 gccgctttcatagggaaccatctttccactgggggtgacgaagtacagggtggggtaacc 52817 Query: 373 ctggacatcaaactcgc 389 || ||||| ||||||| Sbjct: 52816 ttgcacatcgaactcgc 52800
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 253 cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcct 312 |||||| ||||| || |||||||||||| | ||| |||| |||||||||||||| ||||| Sbjct: 4941957 cgcctgaccagcggtttccttgttcttcttaatgaagtcgacgatctcgtcggctgtcct 4942016 Query: 313 gccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaacc 372 ||| | ||||| | ||| |||| || ||||| ||||||||||||||||| ||||||| Sbjct: 4942017 gccgctttcatagggaaccatctttccactgggggtgacgaagtacagggtggggtaacc 4942076 Query: 373 ctggacatcaaactcgc 389 || ||||| ||||||| Sbjct: 4942077 ttgcacatcgaactcgc 4942093
>dbj|AK068268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147I21, full insert sequence Length = 1878 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 253 cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcct 312 |||||| ||||| || |||||||||||| | ||| |||| |||||||||||||| ||||| Sbjct: 1536 cgcctgaccagcggtttccttgttcttcttaatgaagtcgacgatctcgtcggctgtcct 1477 Query: 313 gccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaacc 372 ||| | ||||| | ||| |||| || ||||| ||||||||||||||||| ||||||| Sbjct: 1476 gccgctttcatagggaaccatctttccactgggggtgacgaagtacagggtggggtaacc 1417 Query: 373 ctggacatcaaactcgc 389 || ||||| ||||||| Sbjct: 1416 ttgcacatcgaactcgc 1400
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 253 cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcct 312 |||||| ||||| || |||||||||||| | ||| |||| |||||||||||||| ||||| Sbjct: 4960741 cgcctgaccagcggtttccttgttcttcttaatgaagtcgacgatctcgtcggctgtcct 4960800 Query: 313 gccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaacc 372 ||| | ||||| | ||| |||| || ||||| ||||||||||||||||| ||||||| Sbjct: 4960801 gccgctttcatagggaaccatctttccactgggggtgacgaagtacagggtggggtaacc 4960860 Query: 373 ctggacatcaaactcgc 389 || ||||| ||||||| Sbjct: 4960861 ttgcacatcgaactcgc 4960877
>dbj|AK059538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E04, full insert sequence Length = 1539 Score = 83.8 bits (42), Expect = 4e-13 Identities = 113/137 (82%) Strand = Plus / Minus Query: 253 cgcctgcccagcagtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcct 312 |||||| ||||| || |||||||||||| | ||| |||| | |||||||||||| ||||| Sbjct: 1197 cgcctgaccagcggtttccttgttcttcttaatgaagtcgatgatctcgtcggctgtcct 1138 Query: 313 gccaccctcataagagaccttcttcccgctgggagtgacgaagtacagggtcnggtaacc 372 ||| | ||||| | ||| |||| || ||||| ||||||||||||||||| ||||||| Sbjct: 1137 gccgctttcatagggaaccatctttccactgggggtgacgaagtacagggtggggtaacc 1078 Query: 373 ctggacatcaaactcgc 389 || ||||| ||||||| Sbjct: 1077 ttgcacatcgaactcgc 1061
>gb|AY987391.1| Oryza sativa (japonica cultivar-group) protein disulfide isomerase (PDI) mRNA, complete cds Length = 1915 Score = 75.8 bits (38), Expect = 1e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 269 tccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataagag 328 |||||||||||| | ||| |||| |||||||||||||| |||||||| | || || | Sbjct: 1520 tccttgttcttcttaatgaagtcgacgatctcgtcggctgtcctgccgctttcgtaggga 1461 Query: 329 accttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaactcg 388 ||| |||| || ||||| ||||||||||||||||| ||||||| || ||||| |||||| Sbjct: 1460 accatctttccactgggggtgacgaagtacagggtggggtaaccttgcacatcgaactcg 1401 Query: 389 c 389 | Sbjct: 1400 c 1400
>dbj|AB039278.1| Oryza sativa Pdi mRNA for protein disulfide isomerase, partial cds Length = 1218 Score = 75.8 bits (38), Expect = 1e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 269 tccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataagag 328 |||||||||||| | ||| |||| |||||||||||||| |||||||| | || || | Sbjct: 831 tccttgttcttcttaatgaagtcgacgatctcgtcggctgtcctgccgctttcgtaggga 772 Query: 329 accttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaactcg 388 ||| |||| || ||||| ||||||||||||||||| ||||||| || ||||| |||||| Sbjct: 771 accatctttccactgggggtgacgaagtacagggtggggtaaccttgcacatcgaactcg 712 Query: 389 c 389 | Sbjct: 711 c 711
>gb|AY108116.1| Zea mays PCO074348 mRNA sequence Length = 1955 Score = 54.0 bits (27), Expect = 4e-04 Identities = 98/122 (80%) Strand = Plus / Minus Query: 266 gtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataa 325 ||||||||| ||||| ||||| |||| ||||| ||||| ||||||||||| | || || Sbjct: 1501 gtctccttgctcttcttgatgaagtcgacgatgtcgtccgccgtcctgccgctgtcgtag 1442 Query: 326 gagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaac 385 || | ||||||||| || || |||||||||| |||| |||| || ||||| |||||| Sbjct: 1441 gatgtcaccttcccgctcggggtcacgaagtacaaggtcgggtagccttggacgtcaaac 1382 Query: 386 tc 387 || Sbjct: 1381 tc 1380
>gb|AY739284.1| Zea mays protein disulfide isomerase (PDIL1-1) mRNA, complete cds Length = 1918 Score = 54.0 bits (27), Expect = 4e-04 Identities = 98/122 (80%) Strand = Plus / Minus Query: 266 gtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataa 325 ||||||||| ||||| ||||| |||| ||||| ||||| ||||||||||| | || || Sbjct: 1498 gtctccttgctcttcttgatgaagtcgacgatgtcgtccgccgtcctgccgctgtcgtag 1439 Query: 326 gagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaac 385 || | ||||||||| || || |||||||||| |||| |||| || ||||| |||||| Sbjct: 1438 gatgtcaccttcccgctcggggtcacgaagtacaaggtcgggtagccttggacgtcaaac 1379 Query: 386 tc 387 || Sbjct: 1378 tc 1377
>gb|L39014.1|MZEPDI Zea mays protein disulfide isomerase (pdi) mRNA, complete cds Length = 1823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 98/122 (80%) Strand = Plus / Minus Query: 266 gtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataa 325 ||||||||| ||||| ||||| |||| ||||| ||||| ||||||||||| | || || Sbjct: 1493 gtctccttgctcttcttgatgaagtcgacgatgtcgtccgccgtcctgccgctgtcgtag 1434 Query: 326 gagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaac 385 || | ||||||||| || || |||||||||| |||| |||| || ||||| |||||| Sbjct: 1433 gatgtcaccttcccgctcggggtcacgaagtacaaggtcgggtagccttggacgtcaaac 1374 Query: 386 tc 387 || Sbjct: 1373 tc 1372
>gb|AY739285.1| Zea mays protein disulfide isomerase (PDIL1-2) mRNA, complete cds Length = 1905 Score = 52.0 bits (26), Expect = 0.001 Identities = 109/137 (79%) Strand = Plus / Minus Query: 266 gtctccttgttcttcctgatgtagtcaacgatctcgtcggccgtcctgccaccctcataa 325 ||||||||| |||| ||||| |||| ||||| || || ||||||||||||| || || Sbjct: 1478 gtctccttgctcttgttgatgaagtcgacgatgtcatccgccgtcctgccactgtcgtag 1419 Query: 326 gagaccttcttcccgctgggagtgacgaagtacagggtcnggtaaccctggacatcaaac 385 ||| ||||||||||||||| |||||||||| ||| |||| || ||||| || ||| Sbjct: 1418 gaggtgaccttcccgctgggagtcacgaagtacatggttgggtagccttggacctcgaac 1359 Query: 386 tcgcccggcacgtcatt 402 || | ||||||||||| Sbjct: 1358 tcactgggcacgtcatt 1342
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 cctgccaccctcataagagacc 331 |||||||||||||||||||||| Sbjct: 385726 cctgccaccctcataagagacc 385747
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 cgccttctcggtcgccgccgccgcct 257 ||||||||||| |||||||||||||| Sbjct: 18166120 cgccttctcggccgccgccgccgcct 18166145
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 cgccttctcggtcgccgccgccgcct 257 ||||||||||| |||||||||||||| Sbjct: 14844 cgccttctcggccgccgccgccgcct 14869
>dbj|AK073003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K23, full insert sequence Length = 2335 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 232 cgccttctcggtcgccgccgccgcct 257 ||||||||||| |||||||||||||| Sbjct: 355 cgccttctcggccgccgccgccgcct 330
>gb|AY023280.1| Oryza sativa microsatellite MRG5605 containing (GGC)X8, closest to marker C185, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 180 ccgccgccttcgccgtcgccgccgccgcc 152
>gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha expansin 26 (EXPA26) mRNA, complete cds Length = 1011 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 183 ccgccgccttcgccgtcgccgccgccgcc 155
>gb|AF394561.1| Oryza sativa alpha-expansin OsEXPA26 (EXPA26) gene, complete cds Length = 6312 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 4104 ccgccgccttcgccgtcgccgccgccgcc 4076
>gb|AC164102.2| Mus musculus BAC clone RP23-7E23 from chromosome 13, complete sequence Length = 234552 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tcaggcaaaaccggggccaacacat 83 |||||||||||| |||||||||||| Sbjct: 88983 tcaggcaaaaccagggccaacacat 88959
>ref|XM_541830.2| PREDICTED: Canis familiaris similar to 2-phosphodiesterase (LOC484714), mRNA Length = 2053 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 |||||||| |||| ||||||||||||||| Sbjct: 126 ccgccgccgtctccgtcgccgccgccgcc 98
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 22123382 ccgccgccttcgccgtcgccgccgccgcc 22123354
>gb|AC078797.20| Homo sapiens 3 BAC RP11-125E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166704 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 cgccgccgccgcctgcccagc 264 ||||||||||||||||||||| Sbjct: 2848 cgccgccgccgcctgcccagc 2828
>dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087C24, full insert sequence Length = 1175 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 202 ccgccgccttcgccgtcgccgccgccgcc 174
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 22051727 ccgccgccttcgccgtcgccgccgccgcc 22051699
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ccgccgccttctcggtcgccgccgccgcc 256 ||||||||||| | ||||||||||||||| Sbjct: 129628 ccgccgccttcgccgtcgccgccgccgcc 129656
>ref|XM_515183.1| PREDICTED: Pan troglodytes sulfotransferase family 4A, member 1 (LOC458894), mRNA Length = 875 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 226 ttccgccgccttctcggtcgccgccgccgcct 257 |||||||||| || | |||||||||||||||| Sbjct: 35 ttccgccgccgtcgccgtcgccgccgccgcct 4
>ref|NM_192621.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 909 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 228 ccgccgccttctcg--gtcgccgccgccgcc 256 |||||||||||||| ||||||||||||||| Sbjct: 181 ccgccgccttctcgccgtcgccgccgccgcc 151
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcgcaaaatctggcgttgga 127 |||||||||||||||||||| Sbjct: 2911757 tcgcaaaatctggcgttgga 2911738
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggtcgccgccgccgcctgcc 260 |||||||||||||||||||| Sbjct: 12843542 ggtcgccgccgccgcctgcc 12843523
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggtcgccgccgccgcctgcc 260 |||||||||||||||||||| Sbjct: 81758 ggtcgccgccgccgcctgcc 81739
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ctcggtcgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 115157 ctcggtcgccgccgccgcct 115176
>ref|XM_859137.1| PREDICTED: Canis familiaris similar to Tyrosyl-tRNA synthetase, cytoplasmic (Tyrosyl--tRNA ligase) (TyrRS), transcript variant 2 (LOC478148), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 cgccgccttctcggtcgccgccgccgcc 256 |||||| | ||||||||||||||||||| Sbjct: 67 cgccgcttcctcggtcgccgccgccgcc 40
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcgcaaaatctggcgttgga 127 |||||||||||||||||||| Sbjct: 2921928 tcgcaaaatctggcgttgga 2921909
>emb|AL589987.25| Human DNA sequence from clone RP11-364B14 on chromosome X Contains a novel gene, a heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 143770 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 228 ccgccgccttctcggtcgccgccgccgc 255 |||||||| |||||||||||||||||| Sbjct: 111670 ccgccgccgcctcggtcgccgccgccgc 111643
>emb|AL136134.5| Human DNA sequence from clone RP1-132F20 on chromosome 6, complete sequence Length = 55247 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 tgtttccccatcctctacct 165 |||||||||||||||||||| Sbjct: 39943 tgtttccccatcctctacct 39924
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 caacacatccaacaaccaac 95 |||||||||||||||||||| Sbjct: 116908 caacacatccaacaaccaac 116927
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ggtcgccgccgccgcctgcc 260 |||||||||||||||||||| Sbjct: 95967 ggtcgccgccgccgcctgcc 95986
>emb|BX322551.8| Zebrafish DNA sequence from clone DKEYP-34F6 in linkage group 19, complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 caacacatccaacaaccaac 95 |||||||||||||||||||| Sbjct: 11815 caacacatccaacaaccaac 11834
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggtcgccgccgccgcctgcc 260 |||||||||||||||||||| Sbjct: 12840305 ggtcgccgccgccgcctgcc 12840286
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 228 ccgccgccttctcg--gtcgccgccgccgcc 256 |||||||||||||| ||||||||||||||| Sbjct: 23339743 ccgccgccttctcgccgtcgccgccgccgcc 23339713
>gb|AC005903.5| Homo sapiens 3 PAC RP5-1034C16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 63949 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cctgcccagcagtctccttg 274 |||||||||||||||||||| Sbjct: 20494 cctgcccagcagtctccttg 20475
>ref|XM_218412.3| PREDICTED: Rattus norvegicus sine oculis-related homeobox 5 homolog (Drosophila) (predicted) (Six5_predicted), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcggtcgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 69 ctcggtcgccgccgccgcct 50
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ctcggtcgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 2597039 ctcggtcgccgccgccgcct 2597058
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 228 ccgccgccttctcg--gtcgccgccgccgcc 256 |||||||||||||| ||||||||||||||| Sbjct: 65441 ccgccgccttctcgccgtcgccgccgccgcc 65411
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 228 ccgccgccttctcg--gtcgccgccgccgcc 256 |||||||||||||| ||||||||||||||| Sbjct: 126485 ccgccgccttctcgccgtcgccgccgccgcc 126455
>dbj|AK066814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082F17, full insert sequence Length = 1134 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 228 ccgccgccttctcg--gtcgccgccgccgcc 256 |||||||||||||| ||||||||||||||| Sbjct: 241 ccgccgccttctcgccgtcgccgccgccgcc 211
>gb|AY786551.1| Homo sapiens testis PFKFB4 (PFKFB4) gene, complete cds Length = 45860 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cctgcccagcagtctccttg 274 |||||||||||||||||||| Sbjct: 25367 cctgcccagcagtctccttg 25386
>ref|NM_011383.1| Mus musculus sine oculis-related homeobox 5 homolog (Drosophila) (Six5), mRNA Length = 2853 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcggtcgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 162 ctcggtcgccgccgccgcct 143
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcgcaaaatctggcgttgga 127 |||||||||||||||||||| Sbjct: 2919353 tcgcaaaatctggcgttgga 2919334
>gb|AC087898.19| Mus musculus strain C57BL/6J chromosome 16 clone rp23-101h1, complete sequence Length = 196966 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gccgccgccgcctgcccagc 264 |||||||||||||||||||| Sbjct: 83735 gccgccgccgcctgcccagc 83754
>gb|AC134772.2| Homo sapiens chromosome 3 clone RP13-794C1, complete sequence Length = 177231 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cctgcccagcagtctccttg 274 |||||||||||||||||||| Sbjct: 152379 cctgcccagcagtctccttg 152360
>emb|X84814.1|MMDMAHP M.musculus DMAHP gene Length = 4290 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctcggtcgccgccgccgcct 257 |||||||||||||||||||| Sbjct: 481 ctcggtcgccgccgccgcct 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,364,102 Number of Sequences: 3902068 Number of extensions: 3364102 Number of successful extensions: 96161 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 94599 Number of HSP's gapped (non-prelim): 1534 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
