Clone Name	rbags5l16
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_185332.2| Oryza sativa (japonica cultivar-group), mRNA	254	2e-64
2	dbj|AK111784.1| Oryza sativa (japonica cultivar-group) cDNA clon...	254	2e-64
3	gb|AF149812.1| Oryza sativa predicted protein gene, complete cds	204	1e-49
4	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	204	1e-49
5	dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D...	204	1e-49
6	gb|AY596522.1| Saccharum officinarum clone SCQGLR1019B07, comple...	168	7e-39
7	gb|AY105042.1| Zea mays PCO098401 mRNA sequence	163	5e-37
8	gb|BT017404.1| Zea mays clone EL01N0329H05.c mRNA sequence	139	7e-30
9	ref|NM_112160.2| Arabidopsis thaliana unknown protein AT3G13200 ...	70	5e-09
10	gb|AY072487.1| Arabidopsis thaliana unknown protein (At3g13220; ...	70	5e-09
11	gb|AY054673.1| Arabidopsis thaliana Unknown protein (At3g13220; ...	70	5e-09
12	gb|AY086234.1| Arabidopsis thaliana clone 22807 mRNA, complete s...	70	5e-09
13	gb|AF083766.1| Arabidopsis thaliana clone sps694 unknown mRNA	66	8e-08
14	dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	66	8e-08
15	emb|BX823170.1|CNS0A5W9 Arabidopsis thaliana Full-length cDNA Co...	62	1e-06
16	ref|XM_533974.2| PREDICTED: Canis familiaris similar to RIKEN cD...	60	5e-06
17	ref|XM_533756.2| PREDICTED: Canis familiaris similar to RIKEN cD...	60	5e-06
18	emb|CR857672.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0617 (from cl...	60	5e-06
19	ref|XM_791937.1| PREDICTED: Strongylocentrotus purpuratus simila...	58	2e-05
20	gb|BT013311.1| Lycopersicon esculentum clone 134984R, mRNA sequence	56	8e-05
21	ref|XM_508705.1| PREDICTED: Pan troglodytes similar to hypotheti...	52	0.001
22	gb|DQ216702.1| Taeniopygia guttata clone 0065P0010A06 RIKEN cDNA...	52	0.001
23	ref|XM_615292.2| PREDICTED: Bos taurus similar to RIKEN cDNA 061...	52	0.001
24	ref|XM_878057.1| PREDICTED: Bos taurus similar to RIKEN cDNA 061...	52	0.001
25	ref|XM_866245.1| PREDICTED: Bos taurus similar to RIKEN cDNA 061...	52	0.001
26	gb|BC105398.1| Bos taurus similar to RIKEN cDNA 0610040D20, tran...	52	0.001
27	emb|CR599874.1| full-length cDNA clone CS0DI006YO02 of Placenta ...	52	0.001
28	emb|CR600216.1| full-length cDNA clone CS0CAP005YJ03 of Thymus o...	52	0.001
29	emb|CR596277.1| full-length cDNA clone CS0DK001YP14 of HeLa cell...	52	0.001
30	gb|AF161497.1|AF161497 Homo sapiens HSPC148 mRNA, complete cds	52	0.001
31	ref|XM_226872.2| PREDICTED: Rattus norvegicus similar to RIKEN c...	52	0.001
32	ref|NM_016403.1| Homo sapiens hypothetical protein HSPC148 (HSPC...	52	0.001
33	emb|AJ250393.1|HSA250393 Homo sapiens mRNA for chromosome 11 hyp...	52	0.001
34	gb|AF110775.1|AF110775 Homo sapiens adrenal gland protein AD-002...	52	0.001
35	gb|AY609443.1| Sus scrofa clone Clu_11713.scr.msk.p1.Contig1, mR...	52	0.001
36	gb|BC040946.1| Homo sapiens hypothetical protein HSPC148, mRNA (...	52	0.001
37	dbj|AP006399.1| Lotus japonicus genomic DNA, chromosome 4, clone...	52	0.001
38	gb|AY813032.1| Schistosoma japonicum SJCHGC06309 protein mRNA, c...	50	0.005
39	ref|XM_781685.1| PREDICTED: Strongylocentrotus purpuratus simila...	50	0.005
40	ref|NM_001002050.1| Danio rerio zgc:86607 (zgc:86607), mRNA	50	0.005
41	gb|BC071310.1| Danio rerio zgc:86607, mRNA (cDNA clone MGC:86607...	50	0.005
42	emb|CR716172.2|CNS0GFJP Tetraodon nigroviridis full-length cDNA	48	0.018
43	gb|DQ216701.1| Taeniopygia guttata clone 0061P0011H10 RIKEN cDNA...	44	0.29
44	ref|XM_385684.1| Gibberella zeae PH-1 chromosome 3 hypothetical ...	44	0.29
45	dbj|AP002383.3| Homo sapiens genomic DNA, chromosome 11q, clone:...	44	0.29
46	gb|BC091396.1| Rattus norvegicus hypothetical LOC300361, mRNA (c...	44	0.29
47	ref|NM_001024987.1| Rattus norvegicus hypothetical LOC300361 (RG...	44	0.29
48	emb|CR709556.2|CNS0GAG0 Tetraodon nigroviridis full-length cDNA	42	1.1
49	emb|AL136980.5| Human DNA sequence from clone RP11-207C16 on chr...	42	1.1
50	ref|XM_322420.1| Neurospora crassa OR74A hypothetical protein (N...	40	4.5
51	ref|XM_952713.1| Neurospora crassa OR74A hypothetical protein (N...	40	4.5
52	emb|CR715984.2|CNS0GFEK Tetraodon nigroviridis full-length cDNA	40	4.5
53	gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete se...	40	4.5
54	emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS...	40	4.5
55	gb|AC098799.2| Homo sapiens BAC clone RP11-642E20 from 4, comple...	40	4.5
56	emb|AL646047.9| Mouse DNA sequence from clone RP23-69P8 on chrom...	40	4.5

---

>ref|NM_185332.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1152

 Score =  254 bits (128), Expect = 2e-64
 Identities = 175/192 (91%)
 Strand = Plus / Minus

                                                                       
Query: 145 gcagcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 204
           ||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 802 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 743

                                                                       
Query: 205 gntgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatc 264
           | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 742 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 683

                                                                       
Query: 265 atcatcccaccttctcttgacgttgaaggagccggagttattcatattgatcancgggtt 324
           |||||||||||||||||| || |||||||| |||| ||| || ||||||||||  |||||
Sbjct: 682 atcatcccaccttctcttaacattgaaggatccggcgttgttaatattgatcagggggtt 623

                       
Query: 325 tcctcgcatcag 336
           ||| ||||||||
Sbjct: 622 tccccgcatcag 611

---

>dbj|AK111784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E16, full
           insert sequence
          Length = 1151

 Score =  254 bits (128), Expect = 2e-64
 Identities = 175/192 (91%)
 Strand = Plus / Minus

                                                                       
Query: 145 gcagcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 204
           ||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 801 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 742

                                                                       
Query: 205 gntgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatc 264
           | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 682

                                                                       
Query: 265 atcatcccaccttctcttgacgttgaaggagccggagttattcatattgatcancgggtt 324
           |||||||||||||||||| || |||||||| |||| ||| || ||||||||||  |||||
Sbjct: 681 atcatcccaccttctcttaacattgaaggatccggcgttgttaatattgatcagggggtt 622

                       
Query: 325 tcctcgcatcag 336
           ||| ||||||||
Sbjct: 621 tccccgcatcag 610

---

>gb|AF149812.1| Oryza sativa predicted protein gene, complete cds
          Length = 1250

 Score =  204 bits (103), Expect = 1e-49
 Identities = 124/132 (93%)
 Strand = Plus / Plus

                                                                       
Query: 145 gcagcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 204
           ||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 823 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 882

                                                                       
Query: 205 gntgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatc 264
           | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 883 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 942

                       
Query: 265 atcatcccacct 276
           ||||||||||||
Sbjct: 943 atcatcccacct 954

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  204 bits (103), Expect = 1e-49
 Identities = 124/132 (93%)
 Strand = Plus / Plus

                                                                          
Query: 145    gcagcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 204
              ||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 412669 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 412728

                                                                          
Query: 205    gntgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatc 264
              | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 412729 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 412788

                          
Query: 265    atcatcccacct 276
              ||||||||||||
Sbjct: 412789 atcatcccacct 412800

---

>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0644B06
          Length = 194509

 Score =  204 bits (103), Expect = 1e-49
 Identities = 124/132 (93%)
 Strand = Plus / Plus

                                                                          
Query: 145    gcagcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 204
              ||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 122622 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 122681

                                                                          
Query: 205    gntgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatc 264
              | ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 122682 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 122741

                          
Query: 265    atcatcccacct 276
              ||||||||||||
Sbjct: 122742 atcatcccacct 122753

---

>gb|AY596522.1| Saccharum officinarum clone SCQGLR1019B07, complete sequence
          Length = 997

 Score =  168 bits (85), Expect = 7e-39
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 155 ttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgntgatgaac 214
           ||||||||||| || ||||| || |||||||||||||| |||||||| ||| ||||||||
Sbjct: 741 ttcatgtacctctgaagaaatttacggtggaaatcactcctgatggtatcgttgatgaac 682

                                                                       
Query: 215 cgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatcatcatcccac 274
           ||||||||||||| |||||||||||| || ||||||||||| || |||||||| ||||||
Sbjct: 681 cgtttcggtgtcttggtctctccacgtgcttggttcttgaaaaccacatcatcgtcccac 622

                                                                       
Query: 275 cttctcttgacgttgaaggagccggagttattcatattgatcancgggtttcctcgcatc 334
           |||||||| ||  |||||||||| |  || || ||||| ||||  |||||||| ||||||
Sbjct: 621 cttctcttaacactgaaggagccaggattgttgatattaatcaaagggtttccccgcatc 562

             
Query: 335 ag 336
           ||
Sbjct: 561 ag 560

---

>gb|AY105042.1| Zea mays PCO098401 mRNA sequence
          Length = 1154

 Score =  163 bits (82), Expect = 5e-37
 Identities = 162/190 (85%)
 Strand = Plus / Minus

                                                                       
Query: 147 agcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgn 206
           ||| ||| ||||||||||| || ||||| || |||||||||||||| |||||||||||| 
Sbjct: 847 agcgtcacttcatgtacctctgaagaaatttacggtggaaatcactcctgatggtgtcgt 788

                                                                       
Query: 207 tgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatcat 266
           ||||||||||||||||||||| ||||||||| || || || ||||||||||| || || |
Sbjct: 787 tgatgaaccgtttcggtgtcttggtctctcctcgtgcttgattcttgaataccacgtcgt 728

                                                                       
Query: 267 catcccaccttctcttgacgttgaaggagccggagttattcatattgatcancgggtttc 326
           | |||||||||||||| ||  |||||||||| |  || || ||||| |||| ||||||||
Sbjct: 727 cgtcccaccttctcttaacactgaaggagccagcattgttgatattaatcaacgggtttc 668

                     
Query: 327 ctcgcatcag 336
           | ||||||||
Sbjct: 667 cccgcatcag 658

---

>gb|BT017404.1| Zea mays clone EL01N0329H05.c mRNA sequence
          Length = 866

 Score =  139 bits (70), Expect = 7e-30
 Identities = 159/190 (83%)
 Strand = Plus / Minus

                                                                       
Query: 147 agcntcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgn 206
           ||| ||| ||||||||||| || ||||| || ||| |||||||||| ||||||| |||| 
Sbjct: 682 agcgtcacttcatgtacctctgaagaaatttacgggggaaatcactcctgatggggtcgt 623

                                                                       
Query: 207 tgatgaaccgtttcggtgtctnggtctctccacgagcctggttcttgaatacaacatcat 266
           |||||||||||||||| |||| ||||||||| || || || ||||||||||| || || |
Sbjct: 622 tgatgaaccgtttcggggtcttggtctctcctcgtgcttgattcttgaataccacgtcgt 563

                                                                       
Query: 267 catcccaccttctcttgacgttgaaggagccggagttattcatattgatcancgggtttc 326
           | |||||||||||||| ||  |||||||||| |  || || ||||| |||| ||||||||
Sbjct: 562 cgtcccaccttctcttaacactgaaggagccagcattgttgatattaatcaccgggtttc 503

                     
Query: 327 ctcgcatcag 336
           | ||||||||
Sbjct: 502 cccgcatcag 493

---

>ref|NM_112160.2| Arabidopsis thaliana unknown protein AT3G13200 mRNA, complete cds
          Length = 964

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccaccttctcttgacg 286
           ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 722 ccacgtgcctggtttttgaatacaacatcatcatcccacctccttttgacg 672

---

>gb|AY072487.1| Arabidopsis thaliana unknown protein (At3g13220; MJG19.16) mRNA,
           complete cds
          Length = 773

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccaccttctcttgacg 286
           ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 608 ccacgtgcctggtttttgaatacaacatcatcatcccacctccttttgacg 558

---

>gb|AY054673.1| Arabidopsis thaliana Unknown protein (At3g13220; MJG19.16) mRNA,
           complete cds
          Length = 943

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccaccttctcttgacg 286
           ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 717 ccacgtgcctggtttttgaatacaacatcatcatcccacctccttttgacg 667

---

>gb|AY086234.1| Arabidopsis thaliana clone 22807 mRNA, complete sequence
          Length = 950

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccaccttctcttgacg 286
           ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 722 ccacgtgcctggtttttgaatacaacatcatcatcccacctccttttgacg 672

---

>gb|AF083766.1| Arabidopsis thaliana clone sps694 unknown mRNA
          Length = 457

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccacct 276
           ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 206 ccacgtgcctggtttttgaatacaacatcatcatcccacct 246

---

>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19
          Length = 62948

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 236   ccacgagcctggttcttgaatacaacatcatcatcccacct 276
             ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 53257 ccacgtgcctggtttttgaatacaacatcatcatcccacct 53217

---

>emb|BX823170.1|CNS0A5W9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB95ZA12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 879

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 236 ccacgagcctggttcttgaatacaacatcatcatcccaccttctcttgacg 286
           ||||| |||||| | |||||||||||||||||||||||||| || ||||||
Sbjct: 701 ccacgtgcctgggttttgaatacaacatcatcatcccacctccttttgacg 651

---

>ref|XM_533974.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20
           (LOC476768), mRNA
          Length = 1450

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct: 594 gttcttgaaaacaacatcatcatcccaccttcttttaactttgaag 549

---

>ref|XM_533756.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20
           (LOC476550), mRNA
          Length = 1524

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct: 665 gttcttgaaaacaacatcatcatcccaccttcttttaactttgaag 620

---

>emb|CR857672.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0617 (from clone DKFZp469C0617)
          Length = 830

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct: 676 gttcttgaagacaacatcatcatcccaccttcttttaactttgaag 631

---

>ref|XM_791937.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA
           0610040D20 (LOC592411), mRNA
          Length = 666

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 248 ttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           |||||||| || |||||||||||||||||||| ||||| ||||||
Sbjct: 566 ttcttgaagaccacatcatcatcccaccttcttttgaccttgaag 522

---

>gb|BT013311.1| Lycopersicon esculentum clone 134984R, mRNA sequence
          Length = 983

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 239 cgagcctggttcttgaatacaacatcatcatcccaccttc 278
           ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 693 cgagcttggttcttgaaaactacatcatcatcccaccttc 654

---

>ref|XM_508705.1| PREDICTED: Pan troglodytes similar to hypothetical protein HSPC148
           (LOC451493), mRNA
          Length = 733

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 588 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 543

---

>gb|DQ216702.1| Taeniopygia guttata clone 0065P0010A06 RIKEN cDNA 0610040D20
           variant 2-like mRNA, complete sequence
          Length = 1084

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 247 gttcttgaatacaacatcatcatcccacct 276
           ||||||||| ||||||||||||||||||||
Sbjct: 654 gttcttgaagacaacatcatcatcccacct 625

---

>ref|XM_615292.2| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript
            variant 1 (LOC535258), mRNA
          Length = 1631

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 247  gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
            ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 1198 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 1153

---

>ref|XM_878057.1| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript
           variant 3 (LOC535258), mRNA
          Length = 679

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 248 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 203

---

>ref|XM_866245.1| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript
           variant 2 (LOC535258), mRNA
          Length = 1098

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 665 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 620

---

>gb|BC105398.1| Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 1,
           mRNA (cDNA clone MGC:128364 IMAGE:7986525), complete cds
          Length = 1200

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 750 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 705

---

>emb|CR599874.1| full-length cDNA clone CS0DI006YO02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1049

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 953 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 908

---

>emb|CR600216.1| full-length cDNA clone CS0CAP005YJ03 of Thymus of Homo sapiens
           (human)
          Length = 1078

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 959 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 914

---

>emb|CR596277.1| full-length cDNA clone CS0DK001YP14 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 772

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 624 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 579

---

>gb|AF161497.1|AF161497 Homo sapiens HSPC148 mRNA, complete cds
          Length = 1046

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606

---

>ref|XM_226872.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 0610040D20
           (LOC310177), mRNA
          Length = 787

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           |||||| || ||||||||||||||||||||||| || || ||||||
Sbjct: 637 gttcttaaaaacaacatcatcatcccaccttcttttaaccttgaag 592

---

>ref|NM_016403.1| Homo sapiens hypothetical protein HSPC148 (HSPC148), mRNA
          Length = 1046

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606

---

>emb|AJ250393.1|HSA250393 Homo sapiens mRNA for chromosome 11 hypothetical protein (ORF5)
          Length = 839

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 668 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 623

---

>gb|AF110775.1|AF110775 Homo sapiens adrenal gland protein AD-002 mRNA, complete cds
          Length = 804

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606

---

>gb|AY609443.1| Sus scrofa clone Clu_11713.scr.msk.p1.Contig1, mRNA sequence
          Length = 1142

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 699 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 654

---

>gb|BC040946.1| Homo sapiens hypothetical protein HSPC148, mRNA (cDNA clone
           MGC:48787 IMAGE:6067745), complete cds
          Length = 870

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           ||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 663 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 618

---

>dbj|AP006399.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281a,
             complete sequence
          Length = 20838

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                         
Query: 181   gtggaaatcacttctgatggtgtcgntgatgaaccgtttcggtgtctnggtctctccacg 240
             |||||||||| | |||||||| ||  | ||||| || ||| ||| || ||  || |||||
Sbjct: 17820 gtggaaatcattcctgatggtatcattaatgaatcgcttcagtgccttggcttcaccacg 17761

                                                 
Query: 241   agcctggttcttgaatacaacatcatcatcccacct 276
              || |||||||| || ||||||||||||||||||||
Sbjct: 17760 ggcttggttcttaaacacaacatcatcatcccacct 17725

---

>gb|AY813032.1| Schistosoma japonicum SJCHGC06309 protein mRNA, complete cds
          Length = 959

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 251 ttgaatacaacatcatcatcccaccttctcttgacgttgaa 291
           ||||||||||||||||||||||| ||||  ||||| |||||
Sbjct: 789 ttgaatacaacatcatcatcccatcttcgtttgactttgaa 749

---

>ref|XM_781685.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA
           0610040D20 (LOC581697), mRNA
          Length = 168

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 248 ttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           |||||||| || || ||||||||||||||||| ||||| ||||||
Sbjct: 68  ttcttgaagaccacgtcatcatcccaccttcttttgaccttgaag 24

---

>ref|NM_001002050.1| Danio rerio zgc:86607 (zgc:86607), mRNA
          Length = 1077

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaa 291
           |||||| || ||||| |||||||||||||||||||| ||| ||||
Sbjct: 791 gttcttaaacacaacgtcatcatcccaccttctcttcacgctgaa 747

---

>gb|BC071310.1| Danio rerio zgc:86607, mRNA (cDNA clone MGC:86607 IMAGE:6892202),
           complete cds
          Length = 1077

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaa 291
           |||||| || ||||| |||||||||||||||||||| ||| ||||
Sbjct: 791 gttcttaaacacaacgtcatcatcccaccttctcttcacgctgaa 747

---

>emb|CR716172.2|CNS0GFJP Tetraodon nigroviridis full-length cDNA
          Length = 920

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 248 ttcttgaatacaacatcatcatcccaccttctcttgacgttgaa 291
           |||||||| | |||||| | |||||||||||||||||| |||||
Sbjct: 796 ttcttgaacaaaacatcgtgatcccaccttctcttgactttgaa 753

---

>gb|DQ216701.1| Taeniopygia guttata clone 0061P0011H10 RIKEN cDNA 0610040D20
           variant 2-like mRNA, complete sequence
          Length = 1402

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 247 gttcttgaatacaacatcatcatcccacct 276
           ||||||||| |||||||| |||||||||||
Sbjct: 612 gttcttgaagacaacatcgtcatcccacct 583

---

>ref|XM_385684.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05508.1)
           partial mRNA
          Length = 714

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 236 ccacgagcctggttcttgaatacaacatcatcatccca 273
           |||||||| ||||||||||| || |||||||| |||||
Sbjct: 623 ccacgagcttggttcttgaagaccacatcatcgtccca 586

---

>dbj|AP002383.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-60C6, complete
             sequence
          Length = 170142

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 247   gttcttgaatacaacatcatcatcccacct 276
             ||||||||| ||||| ||||||||||||||
Sbjct: 86459 gttcttgaagacaacgtcatcatcccacct 86488

---

>gb|BC091396.1| Rattus norvegicus hypothetical LOC300361, mRNA (cDNA clone
           MGC:109502 IMAGE:7323256), complete cds
          Length = 1376

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           |||||| || ||||||||||| ||||||||||| || || ||||||
Sbjct: 713 gttcttaaaaacaacatcatcgtcccaccttcttttaaccttgaag 668

---

>ref|NM_001024987.1| Rattus norvegicus hypothetical LOC300361 (RGD1310669), mRNA
          Length = 1376

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 247 gttcttgaatacaacatcatcatcccaccttctcttgacgttgaag 292
           |||||| || ||||||||||| ||||||||||| || || ||||||
Sbjct: 713 gttcttaaaaacaacatcatcgtcccaccttcttttaaccttgaag 668

---

>emb|CR709556.2|CNS0GAG0 Tetraodon nigroviridis full-length cDNA
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 259 aacatcatcatcccaccttctcttgacgttgaa 291
           |||||| | |||||||||||||||||| |||||
Sbjct: 722 aacatcgtgatcccaccttctcttgactttgaa 690

---

>emb|AL136980.5| Human DNA sequence from clone RP11-207C16 on chromosome 9p23-24.3
              Contains a novel gene (contains DKFZp434D105, FLJ12580 and
              KIAA1432), a novel gene and the 3' end of a novel gene
              (FLJ23309), complete sequence
          Length = 169562

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     agaaacatcacaggctcttcc 109
              |||||||||||||||||||||
Sbjct: 148194 agaaacatcacaggctcttcc 148214

---

>ref|XM_322420.1| Neurospora crassa OR74A hypothetical protein (NCU00335.1) partial
           mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 242 gcctggttcttgaatacaacatcatcatcccaccttctcttgac 285
           |||||||||||||| || || || || |||||||| ||||||||
Sbjct: 725 gcctggttcttgaagaccacgtcgtcgtcccacctcctcttgac 682

---

>ref|XM_952713.1| Neurospora crassa OR74A hypothetical protein (NCU00335.1) partial
           mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 242 gcctggttcttgaatacaacatcatcatcccaccttctcttgac 285
           |||||||||||||| || || || || |||||||| ||||||||
Sbjct: 725 gcctggttcttgaagaccacgtcgtcgtcccacctcctcttgac 682

---

>emb|CR715984.2|CNS0GFEK Tetraodon nigroviridis full-length cDNA
          Length = 838

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 268 atcccaccttctcttgacgttgaa 291
           |||||||||||||||||| |||||
Sbjct: 693 atcccaccttctcttgactttgaa 670

---

>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence
          Length = 130194

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 233   tctccacgagcctggttcttgaatacaacatcatcatcccacct 276
             |||||||| || || || ||||| || |||||||||||||||||
Sbjct: 48474 tctccacgggcttgatttttgaacaccacatcatcatcccacct 48517

---

>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     cgataacaaagcatattaca 57
              ||||||||||||||||||||
Sbjct: 730165 cgataacaaagcatattaca 730184

---

>gb|AC098799.2| Homo sapiens BAC clone RP11-642E20 from 4, complete sequence
          Length = 160712

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaatacagaaacatcacagg 102
             ||||||||||||||||||||
Sbjct: 85895 gaatacagaaacatcacagg 85876

---

>emb|AL646047.9| Mouse DNA sequence from clone RP23-69P8 on chromosome 11 Contains the
            Myo1g gene for myosin 1G, a novel gene, a ribosomal
            protein L21 (Rpl21) pseudogene, the 5' end of a novel
            gene and two CpG islands, complete sequence
          Length = 93553

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  atgtacctatgcagaaactt 177
            ||||||||||||||||||||
Sbjct: 6766 atgtacctatgcagaaactt 6785


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,167,569
Number of Sequences: 3902068
Number of extensions: 2167569
Number of successful extensions: 37151
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37080
Number of HSP's gapped (non-prelim): 71
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---