ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5l12 |
|---|---|
| Clone Library Name | barley_pub |
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 216 bits (550), Expect = 2e-56 Identities = 99/109 (90%), Positives = 101/109 (92%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK T ARNCYNTC FAGGS PVCAGAC CKIISG KCPSDYPKLNLLPESGEPDVTQ Sbjct: 29 KSCCKDTLARNCYNTCHFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQ 88 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 CTIGCRNSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAVIQSVEA Sbjct: 89 YCTIGCRNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 216 bits (549), Expect = 2e-56 Identities = 99/109 (90%), Positives = 101/109 (92%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK T ARNCYNTCRFAGGS PVCAGAC CKIISG KCPSDYPKLNLLPESGEPDVTQ Sbjct: 29 KSCCKDTLARNCYNTCRFAGGSRPVCAGACRCKIISGPKCPSDYPKLNLLPESGEPDVTQ 88 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 CTIGC NSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAVIQSVEA Sbjct: 89 YCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAVIQSVEA 137
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 199 bits (507), Expect = 2e-51 Identities = 91/109 (83%), Positives = 95/109 (87%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK T RNCYN CRFAGGS PVCA ACGCKIISG CP DYPKLNLLPESGEP+VT+ Sbjct: 29 KSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNVTE 88 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 CTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 89 YCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 198 bits (503), Expect = 5e-51 Identities = 90/109 (82%), Positives = 94/109 (86%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK T RNCYN CRFAGGS PVCA ACGCKIISG CP DYPKLNLLPESGEP+ T+ Sbjct: 29 KSCCKNTTGRNCYNACRFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNATE 88 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 CTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 89 YCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEVIQSVEA 137
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 196 bits (497), Expect = 2e-50 Identities = 89/109 (81%), Positives = 93/109 (85%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK T RNCYN C FAGGS PVCA ACGCKIISG CP DYPKLNLLPESGEP+ T+ Sbjct: 29 KSCCKNTTGRNCYNACHFAGGSRPVCATACGCKIISGPTCPRDYPKLNLLPESGEPNATE 88 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 CTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG VIQSVEA Sbjct: 89 YCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGDVIQSVEA 137
>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)| (Beta-purothionin) [Contains: Purothionin A-1; Acidic protein] Length = 136 Score = 108 bits (270), Expect = 5e-24 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS CK+T RNCYN CR A G+ +CA C CK+ SG CP D+PKL L S EPD + Sbjct: 28 KSCCKSTLGRNCYNLCR-ARGAQKLCANVCRCKLTSGLSCPKDFPKLVLESNSDEPDTME 86 Query: 244 XCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 C +GCR+S+CD + N ++MK + C +AC FCN A + S++A Sbjct: 87 YCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDACVNFCNADAGLTSLDA 136
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 108 bits (269), Expect = 7e-24 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C++T RNCYN CR A G+ +CAG C CKI SG CP +PKL L S EPD + Sbjct: 17 KSCCRSTLGRNCYNLCR-ARGAQKLCAGVCRCKISSGLSCPKGFPKLALESNSDEPDTIE 75 Query: 244 XCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 C +GCR+SVCD + N ++MK + C++AC FCN A + S++A Sbjct: 76 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDAGLPSLDA 125
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 106 bits (265), Expect = 2e-23 Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C++T RNCYN CR G +CA AC CK+ SG KCPS +PKL L+ S EPD Sbjct: 28 KSCCRSTLGRNCYNLCRVRGAQK-LCANACRCKLTSGLKCPSSFPKLALVSNSDEPDTID 86 Query: 244 XCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 C +GCR S+CD + N ++MK + CS+AC FCN + S+ A Sbjct: 87 YCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDVGLTSLTA 136
>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:| Alpha-hordothionin; Acidic protein] Length = 127 Score = 105 bits (262), Expect = 4e-23 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C++T RNCYN CR G +CAG C CK+ S KCP+ +PKL L+ S EPD + Sbjct: 19 KSCCRSTLGRNCYNLCRVRGAQK-LCAGVCRCKLTSSGKCPTGFPKLALVSNSDEPDTVK 77 Query: 244 XCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 C +GCR S+CD + N ++MK + C +AC FCN A + S+ A Sbjct: 78 YCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDAGLTSLTA 127
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 103 bits (258), Expect = 1e-22 Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C+TT RNCYN CR + G+ +C+ C CK+ SG CP +PKL L S EPD + Sbjct: 28 KSCCRTTLGRNCYNLCR-SRGAQKLCSTVCRCKLTSGLSCPKGFPKLALESNSDEPDTIE 86 Query: 244 XCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGAVIQSVEA 98 C +GCR+SVCD + N ++MK + C +AC FCN A + S++A Sbjct: 87 YCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDAGLTSLDA 136
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 79.0 bits (193), Expect = 4e-15 Identities = 41/101 (40%), Positives = 51/101 (50%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C T RN YNTCR GGS CA GCKIIS S CPSDYPK Sbjct: 7 KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPKF------------- 53 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDG 122 CT+GC++S C ++ ++ + C AC+ C+ G Sbjct: 54 YCTLGCQSSKCASITTP-PNSEVDAEAVRCKAACSNLCDFG 93
>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]| Length = 133 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%) Frame = -3 Query: 415 CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCT 236 C T RN YN CR G S CA GCKI+SG+ CP Y ++L G+ V + C Sbjct: 28 CPRTIDRNIYNACRLTGASMTNCANLSGCKIVSGTTCPPGYTH-DILQNYGDA-VNEYCK 85 Query: 235 IGCRNSVCDNVDNVFRGQKMKFD--MGLCSNACARFCNDGA 119 +GC +SVC + + ++ + + C+NAC+ FC G+ Sbjct: 86 LGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGS 126
>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic| protein] Length = 111 Score = 76.6 bits (187), Expect = 2e-14 Identities = 41/100 (41%), Positives = 45/100 (45%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 KS C T RN YN CR G P CA GCKIISGS CPSDYPK Sbjct: 27 KSCCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPKF------------- 73 Query: 244 XCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCND 125 CT+GC +S C N + C AC+ C D Sbjct: 74 YCTLGCESSQCATNSN------GDAEAVRCKTACSDLCQD 107
>THNC_VISAL (P83554) Viscotoxin C1| Length = 46 Score = 69.3 bits (168), Expect = 4e-12 Identities = 32/46 (69%), Positives = 32/46 (69%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPK 287 KS C T RN YNTCRFAGGS CA GCKIIS S CPSDYPK Sbjct: 1 KSCCPNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYPK 46
>THN_PHOTO (P01539) Phoratoxin| Length = 46 Score = 68.2 bits (165), Expect = 8e-12 Identities = 31/44 (70%), Positives = 33/44 (75%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDY 293 KS C TT ARN YNTCRF GGS PVCA GCKIISG+KC S + Sbjct: 1 KSCCPTTTARNIYNTCRFGGGSRPVCAKLSGCKIISGTKCDSGW 44
>THN_PYRPU (P07504) Thionin| Length = 47 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGG-SXPVCAGACGCKIISGSKCPSDYPK 287 KS C+ T+ARNCYN CR G S +CA C CKIISG+ CPSDYPK Sbjct: 1 KSCCRNTWARNCYNVCRLPGTISREICAKKCDCKIISGTTCPSDYPK 47
>THN2_VISAL (P32880) Viscotoxin A2| Length = 46 Score = 62.4 bits (150), Expect = 4e-10 Identities = 30/45 (66%), Positives = 30/45 (66%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYP 290 KS C T RN YNTCRF GGS VCA GCKIIS S CPS YP Sbjct: 1 KSCCPNTTGRNIYNTCRFGGGSREVCASLSGCKIISASTCPS-YP 44
>THND_HELPU (P60057) Hellethionin D| Length = 46 Score = 60.8 bits (146), Expect = 1e-09 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYP 290 KS C+ T ARNCYN CRF GGS P C C C ++ + CPS +P Sbjct: 1 KSCCRNTLARNCYNACRFTGGSQPTCGILCDCIHVTTTTCPSSHP 45
>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V| thionin); Acidic protein] Length = 131 Score = 59.7 bits (143), Expect = 3e-09 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Frame = -3 Query: 391 CYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCTIGCRNSVC 212 C+N+C + CA C C++ +G L + S EP+ + C++GCR+SVC Sbjct: 41 CFNSCLLGPSTVFQCADFCACRLPAG---------LASVRSSDEPNAIEYCSLGCRSSVC 91 Query: 211 DNVDNVFRG--QKMKFDMGLCSNACARFCNDGAVIQSVE 101 DN+ N ++MK + C AC FC ++ S++ Sbjct: 92 DNMINTADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130
>THNA_PHOLI (P01540) Ligatoxin A| Length = 46 Score = 58.9 bits (141), Expect = 5e-09 Identities = 27/44 (61%), Positives = 29/44 (65%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDY 293 KS C +T ARN YNTCR G S P CA GCKIISGS C S + Sbjct: 1 KSCCPSTTARNIYNTCRLTGTSRPTCASLSGCKIISGSTCBSGW 44
>THN1_VISAL (P01537) Viscotoxin 1-PS| Length = 46 Score = 58.9 bits (141), Expect = 5e-09 Identities = 28/45 (62%), Positives = 30/45 (66%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYP 290 KS C T R+ Y+TCRF GGS VCA GCKIIS S CPS YP Sbjct: 1 KSCCPBTTGRBIYBTCRFGGGSRZVCARISGCKIISASTCPS-YP 44
>THN_DENCL (P01541) Denclatoxin B| Length = 46 Score = 58.5 bits (140), Expect = 6e-09 Identities = 27/44 (61%), Positives = 28/44 (63%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDY 293 KS C TT ARN YN CR G PVCA GCKIISG+ CP Y Sbjct: 1 KSCCPTTAARNQYNICRLPGTPRPVCAALSGCKIISGTGCPPGY 44
>THNB_PHOLI (P59358) Ligatoxin B| Length = 46 Score = 58.5 bits (140), Expect = 6e-09 Identities = 27/44 (61%), Positives = 29/44 (65%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDY 293 KS C +T ARN YNTCR G S VCA GCKIISGS C S + Sbjct: 1 KSCCPSTTARNIYNTCRLTGASRSVCASLSGCKIISGSTCDSGW 44
>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable| thionin-2.4; Acidic protein] Length = 134 Score = 57.0 bits (136), Expect = 2e-08 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Frame = -3 Query: 415 CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCT 236 C + AR YN C FA GS C C IS S CP Y ++L +G+ VT+ C Sbjct: 28 CPSIQARTFYNACLFAVGSPSSCIRNSSCLDISESTCPRGYTN-DILENTGDA-VTEYCK 85 Query: 235 IGCRNSVCDN---VDNVFRGQKMKFDMGLCSNACARFCNDGAV 116 +GC +SVC + N + + ++ C+ AC+ C G++ Sbjct: 86 LGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSM 128
>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic| protein] Length = 134 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Frame = -3 Query: 415 CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCT 236 C T R+ Y C + S C CK S + CP Y ++L SG+ V + C Sbjct: 28 CPTKDDRSVYFVCMLSVSSQFYCLLKSKCKNTSQTICPPGYTN-DILENSGDA-VNEYCK 85 Query: 235 IGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 119 +GC +SVC + N + + + C+ AC+ C G+ Sbjct: 86 LGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCTGGS 127
>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable| thionin-2.3; Acidic protein] Length = 135 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 3/105 (2%) Frame = -3 Query: 424 KS*CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQ 245 K+ C + R + C G +C+ GC+ CPS +P L SG+ V Sbjct: 26 KTCCPSQSTRKEFEDCISEGNLQILCSAESGCRDTYVGYCPSGFP-YGSLTNSGDV-VNV 83 Query: 244 XCTIGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 119 C +GC +S+C ++ + K+ + C+ AC+ C G+ Sbjct: 84 YCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGS 128
>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic| protein] Length = 134 Score = 43.9 bits (102), Expect = 2e-04 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Frame = -3 Query: 415 CKTTFARNCYNTCR--FAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQX 242 C + ARN Y+ CR F+ G C GC+ + CP + +N + E+ + Sbjct: 28 CPSNQARNGYSVCRIRFSKGR---CMQVSGCQ--NSDTCPRGW--VNAILENSADATNEH 80 Query: 241 CTIGCRNSVCDNVDNVFRGQKMKFDMGL---CSNACARFCNDGAVI 113 C +GC SVC ++ + + G C+ C+ FC V+ Sbjct: 81 CKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYVV 126
>CRAM_CRAAB (P01542) Crambin| Length = 46 Score = 43.1 bits (100), Expect = 3e-04 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = -3 Query: 415 CKTTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDY 293 C + AR+ +N CR G +CA GC II G+ CP DY Sbjct: 4 CPSIVARSNFNVCRLPGTPEALCATYTGCIIIPGATCPGDY 44
>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor| Length = 1470 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/63 (23%), Positives = 34/63 (53%) Frame = -1 Query: 261 NQMSLXXAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 82 N ++L P G+L + + + + ++ +++W + A HV ++ V+ L+PN +L Sbjct: 540 NSVTLSWQPGTPGVLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 596 Query: 81 CMI 73 M+ Sbjct: 597 FMV 599
>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1790 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Frame = -3 Query: 373 FAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCTIGCRNSVCDNVDNV 194 + G S V G+C C + P D E G CT + C+ ++ Sbjct: 278 YYGISNMVVRGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDF 337 Query: 193 FRGQKMKFDMGLCSNACARF-CNDGAV 116 F K G +NAC + CND AV Sbjct: 338 FNDLPWKPAFGKKTNACKKCECNDHAV 364
>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 me Length = 695 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/62 (35%), Positives = 24/62 (38%) Frame = -3 Query: 403 FARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCTIGCR 224 F R C CR VC CGCK SKC NL E E DV + G Sbjct: 614 FQRRCCCCCRVC---CRVCCMVCGCKCCRCSKCCK-----NLEEEEKEQDVPVKASGGFD 665 Query: 223 NS 218 N+ Sbjct: 666 NT 667
>ROBO2_HUMAN (Q9HCK4) Roundabout homolog 2 precursor| Length = 1378 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/63 (23%), Positives = 33/63 (52%) Frame = -1 Query: 261 NQMSLXXAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 82 N ++L P G L + + + + ++ +++W + A HV ++ V+ L+PN +L Sbjct: 536 NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 592 Query: 81 CMI 73 M+ Sbjct: 593 FMV 595
>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 697 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/38 (42%), Positives = 16/38 (42%) Frame = -3 Query: 409 TTFARNCYNTCRFAGGSXPVCAGACGCKIISGSKCPSD 296 T F R C CR VC CGCK SKC D Sbjct: 612 TCFQRRCCCCCRVC---CRVCCMVCGCKCCRCSKCCRD 646
>IP22_LYCES (Q43710) Proteinase inhibitor type-2 TR8 precursor (Proteinase| inhibitor type II TR8) Length = 223 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Frame = -3 Query: 382 TCRFAGGSXPVCAGACGCKIISGSK---CPSDYPKLNLLPESGEPDVTQXCTIGCRNSVC 212 T R G CAG GCK S C + ++ + E D T+ C +C Sbjct: 109 TKRVEGLCTNCCAGKKGCKYFSKDGTYICDGESEWVSEKDNNLEKDCTKECDTRIDFGIC 168 Query: 211 DNVDNVFRGQKMKFDMGLCSNACA 140 ++ K GLC+N CA Sbjct: 169 PLLET-------KRVKGLCTNCCA 185
>NUP88_DROME (Q9GYU8) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88| kDa nuclear pore complex protein) (dNup88) (Protein members only) Length = 702 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = +2 Query: 113 NDCTIITETGTCVAAESHVEFHLLATENIVHVVTDRIPASNGAXL 247 + C ++ + +AA+ +++F L ++V + DR+ ASN L Sbjct: 46 DSCLLVRNWRSSLAAKVNIQFQTLIPSSLVSLEVDRVLASNEGSL 90
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 28.5 bits (62), Expect = 6.9 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 1/102 (0%) Frame = -3 Query: 391 CYNTCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCTIGCRNSVC 212 C +C+ G S P C I+ KC S+ P +G V C Sbjct: 560 CDQSCKSCGPSSPRCLSCAEKTILHDGKCISECPHGYYADSTGSCKVCHSSCASCSGPTA 619 Query: 211 DNVDNVFRGQKMKFDMGLCSNACAR-FCNDGAVIQSVEA*SC 89 + Q ++ G C +C F D + ++ A SC Sbjct: 620 AHCIACIHPQTLR--QGHCLPSCGEGFYPDHGICEACHA-SC 658
>SCX9_CENLL (Q8WRY4) Sodium-channel modifier neurotoxin Cll9 precursor| Length = 84 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -3 Query: 397 RNCYNTCRFAGGSXPVCA-GACGCKIISGS 311 +NC C+ GGS C+ AC CK + GS Sbjct: 42 KNCDRNCKKEGGSFGHCSYSACWCKGLPGS 71
>ADAM2_RABIT (Q28660) ADAM 2 precursor (A disintegrin and metalloproteinase| domain 2) (Fertilin beta subunit) (PH-30) (PH30) (PH30-beta) Length = 751 Score = 28.1 bits (61), Expect = 9.0 Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 5/97 (5%) Frame = -3 Query: 382 TCRFAGGSXPVCAGACGCKIISGSKCPSDYPKLNLLPESGEPDVTQXCTIGCRNSVCDNV 203 T G + P+C + C++ GS+C C+N Sbjct: 401 TAEECGRAVPICCNSATCRLEVGSQC-------------------------AEGECCENC 435 Query: 202 DNVFRGQKMKFDMGLCS-----NACARFCNDGAVIQS 107 RGQ + +G C N + C D VIQ+ Sbjct: 436 TFKERGQSCRPPVGECDLFEYCNGTSALCPDDIVIQN 472
>CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclear protein| NP94) Length = 898 Score = 28.1 bits (61), Expect = 9.0 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Frame = +3 Query: 102 STD*MTAPSLQKRAHALLQSPMSNFIFWPRKTLSTLSQTEFLHPMVQX*VTSGSPDSG-R 278 STD P LQK+A Q+ + + ++ L Q VQ V + G R Sbjct: 332 STDTQVQPKLQKQAQT--QTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVQPQAHSQGPR 389 Query: 279 RFSLG*SLGHFEPLMILQPQAPAQTGXEPPAKRQV 383 + L EPL +QPQ Q +PP + Q+ Sbjct: 390 QVQLQ---QEAEPLKQVQPQVQPQAHSQPPRQVQL 421 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,211,497 Number of Sequences: 219361 Number of extensions: 1145149 Number of successful extensions: 3061 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 2917 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3039 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
