ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476133.1| Oryza sativa (japonica cultivar-group), predic... 630 e-177
2dbj|AK069043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 630 e-177
3gb|AY112218.1| Zea mays CL335_1 mRNA sequence 379 e-102
4gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 260 5e-66
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
6gb|AF359522.1|AF359522 Vitis vinifera inward rectifying potassiu... 76 2e-10
7ref|NM_102740.2| Arabidopsis thaliana alpha-mannosidase/ calcium... 52 0.002
8emb|AL713868.12| Human DNA sequence from clone RP11-488L4 on chr... 52 0.002
9gb|AY093280.1| Arabidopsis thaliana endoplasmic reticulum alpha-... 52 0.002
10gb|AY054482.1| Arabidopsis thaliana endoplasmic reticulum alpha-... 52 0.002
11gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P... 52 0.002
12gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome... 46 0.15
13gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complet... 46 0.15
14gb|AY351984.1| Rattus norvegicus karyopherin alpha 1/importin al... 44 0.59
15emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in ... 44 0.59
16emb|BX511084.9| Zebrafish DNA sequence from clone DKEY-265C15 in... 44 0.59
17ref|XM_685283.1| PREDICTED: Danio rerio similar to ALMS1 protein... 44 0.59
18ref|XM_683436.1| PREDICTED: Danio rerio similar to ALMS1 (LOC560... 44 0.59
19emb|BX814722.1|CNS0AELT Arabidopsis thaliana Full-length cDNA Co... 44 0.59
20emb|BX001022.9| Zebrafish DNA sequence from clone CH211-243O19, ... 44 0.59
21ref|NM_198726.1| Rattus norvegicus karyopherin (importin) alpha ... 44 0.59
22gb|AY678486.1| Uncultured proteobacterium clone R8C-A9 16S ribos... 42 2.3
23gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, com... 42 2.3
24gb|AY711101.1| Uncultured delta proteobacterium clone SIMO-1735 ... 42 2.3
25gb|AF233492.1| Uncultured delta proteobacterium DSS12 16S riboso... 42 2.3
26gb|AC146453.3| Pan troglodytes BAC clone CH251-510F17 from Y, co... 42 2.3
27gb|AC147675.2| Pan troglodytes BAC clone CH251-6P20 from Y, comp... 42 2.3
28ref|XM_451726.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B04356g ... 42 2.3
29gb|AC127552.3| Mus musculus BAC clone RP24-550N13 from chromosom... 42 2.3
30gb|AC139189.1| Pan troglodytes BAC clone RP43-7D3 from Y, comple... 42 2.3
31emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chro... 42 2.3
32emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.3
33dbj|BS000613.2| Pan troglodytes chromosome Y clone:PTB-311E10, c... 42 2.3
34dbj|BS000669.1| Pan troglodytes chromosome Y clone:PTB-529M03, c... 42 2.3
35gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 2.3
36gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, comple... 42 2.3
37gb|AY216443.1| Uncultured bacterium clone KM88 16S ribosomal RNA... 42 2.3
38gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y,... 42 2.3
39gb|AC010135.3|AC010135 Homo sapiens BAC clone RP11-128D13 from Y... 42 2.3
40gb|AC107689.7| Mus musculus chromosome 3, clone RP24-283F19, com... 42 2.3
41ref|NM_124807.2| Arabidopsis thaliana LHCB3 (LIGHT-HARVESTING CH... 40 9.3
42gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete... 40 9.3
43gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosom... 40 9.3
44gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete se... 40 9.3
45emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on ch... 40 9.3
46emb|AL121877.14|HSBB140E4 Human DNA sequence from clone RP13-140... 40 9.3
47emb|AL132766.13|HSJ433F14 Human DNA sequence from clone RP3-433F... 40 9.3
48emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chr... 40 9.3
49emb|AL590604.1|SPBPB10D8 S.pombe chromosome II BAC pB10D8 40 9.3
50gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Ca... 40 9.3
51gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete s... 40 9.3
52gb|AC090348.4| Homo sapiens chromosome 18, clone RP11-834M2, com... 40 9.3
53dbj|AK096499.1| Homo sapiens cDNA FLJ39180 fis, clone OCBBF2004168 40 9.3
54gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, com... 40 9.3
55gb|AC092814.2| Homo sapiens chromosome 1 clone RP11-565J7, compl... 40 9.3
56emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, com... 40 9.3
57gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, r... 40 9.3
58gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complet... 40 9.3
59gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, com... 40 9.3
60gb|AC159038.1| Pan troglodytes BAC clone CH251-156A12 from chrom... 40 9.3
61gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complet... 40 9.3
62gb|AC093762.3| Homo sapiens BAC clone RP11-90L9 from 2, complete... 40 9.3
63gb|AC024038.6|AC024038 Homo sapiens BAC clone RP11-349O6 from Y,... 40 9.3
64emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on ch... 40 9.3
65dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.3
66emb|AJ340026.1|HSA340026 Homo sapiens genomic sequence surroundi... 40 9.3
67emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in l... 40 9.3
68gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 9.3
69emb|AL935176.9| Mouse DNA sequence from clone RP23-38O10 on chro... 40 9.3
70emb|AL929267.14| Zebrafish DNA sequence from clone CH211-2M15 in... 40 9.3
71gb|AC005152.1|AC005152 Homo sapiens chromosome 17, clone hRPC.10... 40 9.3
72dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.3
73gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosom... 40 9.3
74emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2... 40 9.3
75emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chro... 40 9.3 
>ref|XM_476133.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score =  630 bits (318), Expect = e-177
 Identities = 507/570 (88%)
 Strand = Plus / Minus

                                                                        
Query: 109  ggaagtgggtgggcctcagtattaaatacatacttgtccagtggaagaatattactttca 168
            |||||||| |||||||| || || ||||||||||| || | |||||||||||| ||||||
Sbjct: 2066 ggaagtggatgggcctctgtgttgaatacatacttatctaatggaagaatattgctttca 2007

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            |||||||||||||||| ||| |||| |||||| || |||||||| |||||||||||||||
Sbjct: 2006 ccaaacagcaaatacaagtatttcagtgtttctccaaggaagaaagtttccattttgtct 1947

                                                                        
Query: 229  ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
            ||||||||||| || | ||||||||||||||||| ||||||||| |||||||| || |||
Sbjct: 1946 ctcctaggtgggggcaagcttgtgacatcatccaatgaagtatagccaccagaatcaact 1887

                                                                        
Query: 289  tttgtatacttctcaaaggcctgaaaaatttgccaaccccactccctatactttggatcc 348
             |||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1886 cttgtatacttctcaaaagcctgaaaaatctgccaaccccattccctatacttcggatcc 1827

                                                                        
Query: 349  tctgtgattctatgcaaaacaaacagggattccacagtctctgggcgtaaaaggttgtga 408
            |||||||||||||  |||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct: 1826 tctgtgattctatataaaacaaatagtgattctacagtctctgggcgtaaaagattgtga 1767

                                                                        
Query: 409  cgatcaagaggcttgattgtgatgtcactaatatattcagaacttttgttcccaccatca 468
            ||||| ||||| |||||| |||| ||| ||| ||||| ||||||||||||||||||||||
Sbjct: 1766 cgatccagaggtttgattatgatatcattaacatattgagaacttttgttcccaccatca 1707

                                                                        
Query: 469  ggtccaccttcaggattaccctcaatgtgaaaataagcaatttcaggagcaagtccagta 528
            ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 ggtcctccctcagaattaccctcaatgtgaaaataagcaatttcaggagcaagtccagta 1647

                                                                        
Query: 529  gaagtcacaaagtacatttcgacacaagttttagccagatcttcagcaagctgaagattt 588
            || ||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| 
Sbjct: 1646 gatgtcacaaagtacatttcaacacaagttttggccaaatcttcagcaagctgcagattg 1587

                                                                        
Query: 589  tctatgtcttcattagttagaagattactttcaagagcctttttcttagtgatccccttt 648
            |||||||||||   ||| |  | || | |||||||||| |||||||| || || ||||| 
Sbjct: 1586 tctatgtcttccgcagtcaataaatgattttcaagagcttttttcttggttatacccttc 1527

                                          
Query: 649  gttgcacccagagcaagggtgccaggaaga 678
            |||||||||||||||||||| |||||||||
Sbjct: 1526 gttgcacccagagcaagggtaccaggaaga 1497
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>dbj|AK069043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008E16, full
            insert sequence
          Length = 2701

 Score =  630 bits (318), Expect = e-177
 Identities = 507/570 (88%)
 Strand = Plus / Minus

                                                                        
Query: 109  ggaagtgggtgggcctcagtattaaatacatacttgtccagtggaagaatattactttca 168
            |||||||| |||||||| || || ||||||||||| || | |||||||||||| ||||||
Sbjct: 2014 ggaagtggatgggcctctgtgttgaatacatacttatctaatggaagaatattgctttca 1955

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            |||||||||||||||| ||| |||| |||||| || |||||||| |||||||||||||||
Sbjct: 1954 ccaaacagcaaatacaagtatttcagtgtttctccaaggaagaaagtttccattttgtct 1895

                                                                        
Query: 229  ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
            ||||||||||| || | ||||||||||||||||| ||||||||| |||||||| || |||
Sbjct: 1894 ctcctaggtgggggcaagcttgtgacatcatccaatgaagtatagccaccagaatcaact 1835

                                                                        
Query: 289  tttgtatacttctcaaaggcctgaaaaatttgccaaccccactccctatactttggatcc 348
             |||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1834 cttgtatacttctcaaaagcctgaaaaatctgccaaccccattccctatacttcggatcc 1775

                                                                        
Query: 349  tctgtgattctatgcaaaacaaacagggattccacagtctctgggcgtaaaaggttgtga 408
            |||||||||||||  |||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct: 1774 tctgtgattctatataaaacaaatagtgattctacagtctctgggcgtaaaagattgtga 1715

                                                                        
Query: 409  cgatcaagaggcttgattgtgatgtcactaatatattcagaacttttgttcccaccatca 468
            ||||| ||||| |||||| |||| ||| ||| ||||| ||||||||||||||||||||||
Sbjct: 1714 cgatccagaggtttgattatgatatcattaacatattgagaacttttgttcccaccatca 1655

                                                                        
Query: 469  ggtccaccttcaggattaccctcaatgtgaaaataagcaatttcaggagcaagtccagta 528
            ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 ggtcctccctcagaattaccctcaatgtgaaaataagcaatttcaggagcaagtccagta 1595

                                                                        
Query: 529  gaagtcacaaagtacatttcgacacaagttttagccagatcttcagcaagctgaagattt 588
            || ||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| 
Sbjct: 1594 gatgtcacaaagtacatttcaacacaagttttggccaaatcttcagcaagctgcagattg 1535

                                                                        
Query: 589  tctatgtcttcattagttagaagattactttcaagagcctttttcttagtgatccccttt 648
            |||||||||||   ||| |  | || | |||||||||| |||||||| || || ||||| 
Sbjct: 1534 tctatgtcttccgcagtcaataaatgattttcaagagcttttttcttggttatacccttc 1475

                                          
Query: 649  gttgcacccagagcaagggtgccaggaaga 678
            |||||||||||||||||||| |||||||||
Sbjct: 1474 gttgcacccagagcaagggtaccaggaaga 1445
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>gb|AY112218.1| Zea mays CL335_1 mRNA sequence
          Length = 808

 Score =  379 bits (191), Expect = e-102
 Identities = 416/493 (84%)
 Strand = Plus / Minus

                                                                       
Query: 109 ggaagtgggtgggcctcagtattaaatacatacttgtccagtggaagaatattactttca 168
           ||||| || |||||||| ||||| || |||||||| || || |||||  ||||  |||||
Sbjct: 496 ggaagaggatgggcctctgtattgaacacatacttatctaggggaagggtattgttttca 437

                                                                       
Query: 169 ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            ||||||| |||||||  |||||||||||||| || || ||||| ||||||||||| |||
Sbjct: 436 tcaaacagtaaatacaaatacttcaatgtttctccaagaaagaaagtttccattttatct 377

                                                                       
Query: 229 ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
           ||| | |  ||||||||||||||||||||||||| ||| || ||||||||||| || |||
Sbjct: 376 ctcgtggaaggaggtaggcttgtgacatcatccaatgatgtgtaaccaccagaatcaact 317

                                                                       
Query: 289 tttgtatacttctcaaaggcctgaaaaatttgccaaccccactccctatactttggatcc 348
           ||||| ||||||||||| |||||||| || ||||||||||||||||||||||| | ||||
Sbjct: 316 tttgtgtacttctcaaaagcctgaaagatctgccaaccccactccctatacttggaatcc 257

                                                                       
Query: 349 tctgtgattctatgcaaaacaaacagggattccacagtctctgggcgtaaaaggttgtga 408
           ||||||||||||| ||||||||| || |||||||||||||||||||||| ||  ||||||
Sbjct: 256 tctgtgattctatacaaaacaaatagtgattccacagtctctgggcgtagaacattgtga 197

                                                                       
Query: 409 cgatcaagaggcttgattgtgatgtcactaatatattcagaacttttgttcccaccatca 468
           || ||||| || || |||  ||| ||| | |||||||  || ||||| ||||||||||||
Sbjct: 196 cggtcaagtggttttattacgatatcattgatatatttggagcttttattcccaccatca 137

                                                                       
Query: 469 ggtccaccttcaggattaccctcaatgtgaaaataagcaatttcaggagcaagtccagta 528
           ||      ||| | || |||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 136 ggnnnnnnttctgtatcaccctcaatgtggaaataagctatttcaggagcaaggccggta 77

                                                                       
Query: 529 gaagtcacaaagtacatttcgacacaagttttagccagatcttcagcaagctgaagattt 588
           || ||||| |||||||| || ||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 76  gaggtcacgaagtacatctcaacacatgttttggcaagatcttcagcaagctgcagattt 17

                        
Query: 589 tctatgtcttcat 601
           ||||| |||||||
Sbjct: 16  tctatatcttcat 4
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score =  260 bits (131), Expect = 5e-66
 Identities = 206/231 (89%)
 Strand = Plus / Plus

                                                                         
Query: 109   ggaagtgggtgggcctcagtattaaatacatacttgtccagtggaagaatattactttca 168
             |||||||| |||||||| || || ||||||||||| || | |||||||||||| ||||||
Sbjct: 39146 ggaagtggatgggcctctgtgttgaatacatacttatctaatggaagaatattgctttca 39205

                                                                         
Query: 169   ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
             |||||||||||||||| ||| |||| |||||| || |||||||| |||||||||||||||
Sbjct: 39206 ccaaacagcaaatacaagtatttcagtgtttctccaaggaagaaagtttccattttgtct 39265

                                                                         
Query: 229   ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
             ||||||||||| || | ||||||||||||||||| ||||||||| |||||||| || |||
Sbjct: 39266 ctcctaggtgggggcaagcttgtgacatcatccaatgaagtatagccaccagaatcaact 39325

                                                                
Query: 289   tttgtatacttctcaaaggcctgaaaaatttgccaaccccactccctatac 339
              |||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 39326 cttgtatacttctcaaaagcctgaaaaatctgccaaccccattccctatac 39376



 Score =  212 bits (107), Expect = 1e-51
 Identities = 170/191 (89%)
 Strand = Plus / Plus

                                                                         
Query: 488   cctcaatgtgaaaataagcaatttcaggagcaagtccagtagaagtcacaaagtacattt 547
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 39815 cctcaatgtgaaaataagcaatttcaggagcaagtccagtagatgtcacaaagtacattt 39874

                                                                         
Query: 548   cgacacaagttttagccagatcttcagcaagctgaagattttctatgtcttcattagtta 607
             | ||||||||||| |||| ||||||||||||||| ||||| |||||||||||   ||| |
Sbjct: 39875 caacacaagttttggccaaatcttcagcaagctgcagattgtctatgtcttccgcagtca 39934

                                                                         
Query: 608   gaagattactttcaagagcctttttcttagtgatcccctttgttgcacccagagcaaggg 667
               | || | |||||||||| |||||||| || || ||||| |||||||||||||||||||
Sbjct: 39935 ataaatgattttcaagagcttttttcttggttatacccttcgttgcacccagagcaaggg 39994

                        
Query: 668   tgccaggaaga 678
             | |||||||||
Sbjct: 39995 taccaggaaga 40005



 Score =  170 bits (86), Expect = 4e-39
 Identities = 137/154 (88%)
 Strand = Plus / Plus

                                                                         
Query: 337   tactttggatcctctgtgattctatgcaaaacaaacagggattccacagtctctgggcgt 396
             ||||| |||||||||||||||||||  |||||||| || ||||| |||||||||||||||
Sbjct: 39535 tacttcggatcctctgtgattctatataaaacaaatagtgattctacagtctctgggcgt 39594

                                                                         
Query: 397   aaaaggttgtgacgatcaagaggcttgattgtgatgtcactaatatattcagaacttttg 456
             ||||| ||||||||||| ||||| |||||| |||| ||| ||| ||||| ||||||||||
Sbjct: 39595 aaaagattgtgacgatccagaggtttgattatgatatcattaacatattgagaacttttg 39654

                                               
Query: 457   ttcccaccatcaggtccaccttcaggattaccct 490
             ||||||||||||||||| || |||| ||||||||
Sbjct: 39655 ttcccaccatcaggtcctccctcagaattaccct 39688
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  260 bits (131), Expect = 5e-66
 Identities = 206/231 (89%)
 Strand = Plus / Plus

                                                                           
Query: 109     ggaagtgggtgggcctcagtattaaatacatacttgtccagtggaagaatattactttca 168
               |||||||| |||||||| || || ||||||||||| || | |||||||||||| ||||||
Sbjct: 6667984 ggaagtggatgggcctctgtgttgaatacatacttatctaatggaagaatattgctttca 6668043

                                                                           
Query: 169     ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
               |||||||||||||||| ||| |||| |||||| || |||||||| |||||||||||||||
Sbjct: 6668044 ccaaacagcaaatacaagtatttcagtgtttctccaaggaagaaagtttccattttgtct 6668103

                                                                           
Query: 229     ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
               ||||||||||| || | ||||||||||||||||| ||||||||| |||||||| || |||
Sbjct: 6668104 ctcctaggtgggggcaagcttgtgacatcatccaatgaagtatagccaccagaatcaact 6668163

                                                                  
Query: 289     tttgtatacttctcaaaggcctgaaaaatttgccaaccccactccctatac 339
                |||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 6668164 cttgtatacttctcaaaagcctgaaaaatctgccaaccccattccctatac 6668214



 Score =  212 bits (107), Expect = 1e-51
 Identities = 170/191 (89%)
 Strand = Plus / Plus

                                                                           
Query: 488     cctcaatgtgaaaataagcaatttcaggagcaagtccagtagaagtcacaaagtacattt 547
               ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6668653 cctcaatgtgaaaataagcaatttcaggagcaagtccagtagatgtcacaaagtacattt 6668712

                                                                           
Query: 548     cgacacaagttttagccagatcttcagcaagctgaagattttctatgtcttcattagtta 607
               | ||||||||||| |||| ||||||||||||||| ||||| |||||||||||   ||| |
Sbjct: 6668713 caacacaagttttggccaaatcttcagcaagctgcagattgtctatgtcttccgcagtca 6668772

                                                                           
Query: 608     gaagattactttcaagagcctttttcttagtgatcccctttgttgcacccagagcaaggg 667
                 | || | |||||||||| |||||||| || || ||||| |||||||||||||||||||
Sbjct: 6668773 ataaatgattttcaagagcttttttcttggttatacccttcgttgcacccagagcaaggg 6668832

                          
Query: 668     tgccaggaaga 678
               | |||||||||
Sbjct: 6668833 taccaggaaga 6668843



 Score =  170 bits (86), Expect = 4e-39
 Identities = 137/154 (88%)
 Strand = Plus / Plus

                                                                           
Query: 337     tactttggatcctctgtgattctatgcaaaacaaacagggattccacagtctctgggcgt 396
               ||||| |||||||||||||||||||  |||||||| || ||||| |||||||||||||||
Sbjct: 6668373 tacttcggatcctctgtgattctatataaaacaaatagtgattctacagtctctgggcgt 6668432

                                                                           
Query: 397     aaaaggttgtgacgatcaagaggcttgattgtgatgtcactaatatattcagaacttttg 456
               ||||| ||||||||||| ||||| |||||| |||| ||| ||| ||||| ||||||||||
Sbjct: 6668433 aaaagattgtgacgatccagaggtttgattatgatatcattaacatattgagaacttttg 6668492

                                                 
Query: 457     ttcccaccatcaggtccaccttcaggattaccct 490
               ||||||||||||||||| || |||| ||||||||
Sbjct: 6668493 ttcccaccatcaggtcctccctcagaattaccct 6668526
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>gb|AF359522.1|AF359522 Vitis vinifera inward rectifying potassium channel (SIRK) gene,
            promoter region and complete cds
          Length = 7891

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                        
Query: 170  caaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtctc 229
            |||||||||| || | |||||||| ||| || || | |||||||||||||||||||||||
Sbjct: 7423 caaacagcaagtataagtacttcagtgtctctcctaagaagaaggtttccattttgtctc 7482

                                              
Query: 230  tcctaggtggaggtaggcttgtgacatcatccag 263
            ||||  | ||||| || || ||||||||||||||
Sbjct: 7483 tcctttgaggaggaagcctggtgacatcatccag 7516
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>ref|NM_102740.2| Arabidopsis thaliana alpha-mannosidase/ calcium ion binding /
            mannosyl-oligosaccharide 1,2-alpha-mannosidase AT1G30000
            mRNA, complete cds
          Length = 2344

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 125/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            ||||| ||||| || | |||||||||||||||||| ||||| || || ||||| || |||
Sbjct: 1944 ccaaagagcaagtataagtacttcaatgtttcaccaaggaaaaatgtctccatcttatct 1885

                                                                        
Query: 229  ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
            || ||| | ||||| |    ||| |||||||||| ||| || || ||||| || |  || 
Sbjct: 1884 cttctatgaggaggcacttctgttacatcatccaatgatgtgtatccacctgatttcacc 1825

                                                  
Query: 289  tttgtatacttctcaaaggcctgaaaaatttgccaacc 326
            ||||| ||||| ||||| || | |||||||||||||||
Sbjct: 1824 tttgtgtacttttcaaaagcttcaaaaatttgccaacc 1787



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 494  tgtgaaaataagcaatttcaggagcaagtccagt 527
            ||||||| ||||||||||| |||||||| |||||
Sbjct: 1619 tgtgaaagtaagcaatttctggagcaaggccagt 1586
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>emb|AL713868.12| Human DNA sequence from clone RP11-488L4 on chromosome 1 Contains the
             5' end of the SLC35F3 gene for solute carrier family 35
             member F3 and a CpG island, complete sequence
          Length = 108012

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 583   agattttctatgtcttcattagttag 608
             ||||||||||||||||||||||||||
Sbjct: 20897 agattttctatgtcttcattagttag 20922
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>gb|AY093280.1| Arabidopsis thaliana endoplasmic reticulum alpha-mannosidase,
            putative (At1g30000) mRNA, complete cds
          Length = 2138

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 125/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            ||||| ||||| || | |||||||||||||||||| ||||| || || ||||| || |||
Sbjct: 1796 ccaaagagcaagtataagtacttcaatgtttcaccaaggaaaaatgtctccatcttatct 1737

                                                                        
Query: 229  ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
            || ||| | ||||| |    ||| |||||||||| ||| || || ||||| || |  || 
Sbjct: 1736 cttctatgaggaggcacttctgttacatcatccaatgatgtgtatccacctgatttcacc 1677

                                                  
Query: 289  tttgtatacttctcaaaggcctgaaaaatttgccaacc 326
            ||||| ||||| ||||| || | |||||||||||||||
Sbjct: 1676 tttgtgtacttttcaaaagcttcaaaaatttgccaacc 1639



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 494  tgtgaaaataagcaatttcaggagcaagtccagt 527
            ||||||| ||||||||||| |||||||| |||||
Sbjct: 1471 tgtgaaagtaagcaatttctggagcaaggccagt 1438
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>gb|AY054482.1| Arabidopsis thaliana endoplasmic reticulum alpha-mannosidase,
            putative (At1g30000; T1P2.10) mRNA, complete cds
          Length = 2327

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 125/158 (79%)
 Strand = Plus / Minus

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            ||||| ||||| || | |||||||||||||||||| ||||| || || ||||| || |||
Sbjct: 1928 ccaaagagcaagtataagtacttcaatgtttcaccaaggaaaaatgtctccatcttatct 1869

                                                                        
Query: 229  ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
            || ||| | ||||| |    ||| |||||||||| ||| || || ||||| || |  || 
Sbjct: 1868 cttctatgaggaggcacttctgttacatcatccaatgatgtgtatccacctgatttcacc 1809

                                                  
Query: 289  tttgtatacttctcaaaggcctgaaaaatttgccaacc 326
            ||||| ||||| ||||| || | |||||||||||||||
Sbjct: 1808 tttgtgtacttttcaaaagcttcaaaaatttgccaacc 1771



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 494  tgtgaaaataagcaatttcaggagcaagtccagt 527
            ||||||| ||||||||||| |||||||| |||||
Sbjct: 1603 tgtgaaagtaagcaatttctggagcaaggccagt 1570
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>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete
             sequence
          Length = 82053

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 125/158 (79%)
 Strand = Plus / Plus

                                                                         
Query: 169   ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
             ||||| ||||| || | |||||||||||||||||| ||||| || || ||||| || |||
Sbjct: 31487 ccaaagagcaagtataagtacttcaatgtttcaccaaggaaaaatgtctccatcttatct 31546

                                                                         
Query: 229   ctcctaggtggaggtaggcttgtgacatcatccagtgaagtataaccaccagagtcgact 288
             || ||| | ||||| |    ||| |||||||||| ||| || || ||||| || |  || 
Sbjct: 31547 cttctatgaggaggcacttctgttacatcatccaatgatgtgtatccacctgatttcacc 31606

                                                   
Query: 289   tttgtatacttctcaaaggcctgaaaaatttgccaacc 326
             ||||| ||||| ||||| || | |||||||||||||||
Sbjct: 31607 tttgtgtacttttcaaaagcttcaaaaatttgccaacc 31644



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 494   tgtgaaaataagcaatttcaggagcaagtccagt 527
             ||||||| ||||||||||| |||||||| |||||
Sbjct: 31991 tgtgaaagtaagcaatttctggagcaaggccagt 32024
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>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence
          Length = 184288

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 656   ccagagcaagggtgccaggaaga 678
             |||||||||||||||||||||||
Sbjct: 25335 ccagagcaagggtgccaggaaga 25313
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>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence
          Length = 176888

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 656    ccagagcaagggtgccaggaaga 678
              |||||||||||||||||||||||
Sbjct: 172288 ccagagcaagggtgccaggaaga 172266
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>gb|AY351984.1| Rattus norvegicus karyopherin alpha 1/importin alpha 5 (Kpna1) mRNA,
            complete cds
          Length = 4975

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 123  ctcagtattaaatacatacttg 144
            ||||||||||||||||||||||
Sbjct: 4486 ctcagtattaaatacatacttg 4465
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>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13,
            complete sequence
          Length = 242350

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 445  tcagaacttttgttcccaccat 466
            ||||||||||||||||||||||
Sbjct: 4394 tcagaacttttgttcccaccat 4415
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>emb|BX511084.9| Zebrafish DNA sequence from clone DKEY-265C15 in linkage group 13,
             complete sequence
          Length = 156524

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 445   tcagaacttttgttcccaccat 466
             ||||||||||||||||||||||
Sbjct: 28907 tcagaacttttgttcccaccat 28886
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>ref|XM_685283.1| PREDICTED: Danio rerio similar to ALMS1 protein (LOC561882), mRNA
          Length = 5673

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 445 tcagaacttttgttcccaccat 466
           ||||||||||||||||||||||
Sbjct: 410 tcagaacttttgttcccaccat 389
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>ref|XM_683436.1| PREDICTED: Danio rerio similar to ALMS1 (LOC560046), mRNA
          Length = 5157

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 445 tcagaacttttgttcccaccat 466
           ||||||||||||||||||||||
Sbjct: 410 tcagaacttttgttcccaccat 389
to top
>emb|BX814722.1|CNS0AELT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZG12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2175

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  ccaaacagcaaatacaggtacttcaatgtttcacccaggaagaaggtttccattttgtct 228
            ||||| ||||| || | |||||||||||||||||| ||||| || || ||||| || |||
Sbjct: 1946 ccaaagagcaagtataagtacttcaatgtttcaccaaggaaaaatgtctccatcttatct 1887

              
Query: 229  ct 230
            ||
Sbjct: 1886 ct 1885



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 494  tgtgaaaataagcaatttcaggagcaagtccagt 527
            ||||||| ||||||||||| |||||||| |||||
Sbjct: 1621 tgtgaaagtaagcaatttctggagcaaggccagt 1588
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>emb|BX001022.9| Zebrafish DNA sequence from clone CH211-243O19, complete sequence
          Length = 160804

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 445   tcagaacttttgttcccaccat 466
             ||||||||||||||||||||||
Sbjct: 80889 tcagaacttttgttcccaccat 80910
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>ref|NM_198726.1| Rattus norvegicus karyopherin (importin) alpha 1 (Kpna1), mRNA
          Length = 4975

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 123  ctcagtattaaatacatacttg 144
            ||||||||||||||||||||||
Sbjct: 4486 ctcagtattaaatacatacttg 4465
to top
>gb|AY678486.1| Uncultured proteobacterium clone R8C-A9 16S ribosomal RNA gene,
           partial sequence
          Length = 653

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 568 tcttcagcaagctgaagattt 588
           |||||||||||||||||||||
Sbjct: 85  tcttcagcaagctgaagattt 65
to top
>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence
          Length = 190857

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   cagggattccacagtctctgg 392
             |||||||||||||||||||||
Sbjct: 49129 cagggattccacagtctctgg 49149
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>gb|AY711101.1| Uncultured delta proteobacterium clone SIMO-1735 16S ribosomal RNA
           gene, partial sequence
          Length = 705

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 568 tcttcagcaagctgaagattt 588
           |||||||||||||||||||||
Sbjct: 35  tcttcagcaagctgaagattt 15
to top
>gb|AF233492.1| Uncultured delta proteobacterium DSS12 16S ribosomal RNA gene,
           partial sequence
          Length = 651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 568 tcttcagcaagctgaagattt 588
           |||||||||||||||||||||
Sbjct: 57  tcttcagcaagctgaagattt 37
to top
>gb|AC146453.3| Pan troglodytes BAC clone CH251-510F17 from Y, complete sequence
          Length = 215114

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 609    aagattactttcaagagcctttttc 633
              ||||||| |||||||||||||||||
Sbjct: 192909 aagattattttcaagagcctttttc 192885
to top
>gb|AC147675.2| Pan troglodytes BAC clone CH251-6P20 from Y, complete sequence
          Length = 166567

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 609   aagattactttcaagagcctttttc 633
             ||||||| |||||||||||||||||
Sbjct: 26237 aagattattttcaagagcctttttc 26261
to top
>ref|XM_451726.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B04356g predicted mRNA
          Length = 1656

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 118  tgggcctcagtattaaataca 138
            |||||||||||||||||||||
Sbjct: 1589 tgggcctcagtattaaataca 1569
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>gb|AC127552.3| Mus musculus BAC clone RP24-550N13 from chromosome 3, complete sequence
          Length = 156534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   ttcagaacttttgttcccacc 464
             |||||||||||||||||||||
Sbjct: 28596 ttcagaacttttgttcccacc 28576
to top
>gb|AC139189.1| Pan troglodytes BAC clone RP43-7D3 from Y, complete sequence
          Length = 164874

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 609    aagattactttcaagagcctttttc 633
              ||||||| |||||||||||||||||
Sbjct: 118024 aagattattttcaagagcctttttc 118048



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 609   aagattactttcaagagcctttttc 633
             ||||||| |||||||||||||||||
Sbjct: 32428 aagattattttcaagagcctttttc 32404
to top
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete
             sequence
          Length = 117273

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 313   aaaatttgccaaccccactccctat 337
             |||||| ||||||||||||||||||
Sbjct: 47293 aaaattagccaaccccactccctat 47269
to top
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    tgggcctcagtattaaataca 138
              |||||||||||||||||||||
Sbjct: 388612 tgggcctcagtattaaataca 388632
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>dbj|BS000613.2| Pan troglodytes chromosome Y clone:PTB-311E10, complete sequences
          Length = 71006

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 609   aagattactttcaagagcctttttc 633
             ||||||| |||||||||||||||||
Sbjct: 23497 aagattattttcaagagcctttttc 23473
to top
>dbj|BS000669.1| Pan troglodytes chromosome Y clone:PTB-529M03, complete sequences
          Length = 163369

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 609   aagattactttcaagagcctttttc 633
             ||||||| |||||||||||||||||
Sbjct: 79219 aagattattttcaagagcctttttc 79243
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 609      aagattactttcaagagcctttttc 633
                ||||||| |||||||||||||||||
Sbjct: 21837185 aagattattttcaagagcctttttc 21837209



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 609      aagattactttcaagagcctttttc 633
                ||||||| |||||||||||||||||
Sbjct: 21751593 aagattattttcaagagcctttttc 21751569
to top
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence
          Length = 203568

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 582    aagattttctatgtcttcatt 602
              |||||||||||||||||||||
Sbjct: 132251 aagattttctatgtcttcatt 132271
to top
>gb|AY216443.1| Uncultured bacterium clone KM88 16S ribosomal RNA gene, partial
           sequence
          Length = 1419

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 568 tcttcagcaagctgaagattt 588
           |||||||||||||||||||||
Sbjct: 84  tcttcagcaagctgaagattt 64
to top
>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence
          Length = 205053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 609    aagattactttcaagagcctttttc 633
              ||||||| |||||||||||||||||
Sbjct: 171302 aagattattttcaagagcctttttc 171278
to top
>gb|AC010135.3|AC010135 Homo sapiens BAC clone RP11-128D13 from Y, complete sequence
          Length = 176951

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 609   aagattactttcaagagcctttttc 633
             ||||||| |||||||||||||||||
Sbjct: 34563 aagattattttcaagagcctttttc 34587
to top
>gb|AC107689.7| Mus musculus chromosome 3, clone RP24-283F19, complete sequence
          Length = 168704

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   ttcagaacttttgttcccacc 464
             |||||||||||||||||||||
Sbjct: 89960 ttcagaacttttgttcccacc 89940
to top
>ref|NM_124807.2| Arabidopsis thaliana LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING
           PROTEIN 3) AT5G54270 (LHCB3) mRNA, complete cds
          Length = 1078

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 tactttcaccaaacagcaaa 180
           ||||||||||||||||||||
Sbjct: 22  tactttcaccaaacagcaaa 41
to top
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      atttctgttagttaaccttt 26
              ||||||||||||||||||||
Sbjct: 151157 atttctgttagttaaccttt 151138
to top
>gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence
          Length = 211388

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 578    gctgaagattttctatgtcttcat 601
              ||||||||| ||||||||||||||
Sbjct: 146775 gctgaagatgttctatgtcttcat 146752
to top
>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence
          Length = 111262

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tgatgtcactaatatattca 447
             ||||||||||||||||||||
Sbjct: 34317 tgatgtcactaatatattca 34298
to top
>emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on chromosome 10 Contains a
            novel gene, complete sequence
          Length = 103124

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 153  aagaatattactttcacca-aacagcaa 179
            ||||||||||||||||||| ||||||||
Sbjct: 7362 aagaatattactttcaccataacagcaa 7389
to top
>emb|AL121877.14|HSBB140E4 Human DNA sequence from clone RP13-140E4 on chromosome X Contains a
             staufen, RNA binding protein homolog 2, (Drosophila)
             (STAU2) pseudogene and an ubiquitin specific protease 1
             (USP1) pseudogene, complete sequence
          Length = 163253

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 288   ttttgtatacttctcaaaggcctgaaaa 315
             |||||||||||||| |||||||||||||
Sbjct: 71759 ttttgtatacttct-aaaggcctgaaaa 71733
to top
>emb|AL132766.13|HSJ433F14 Human DNA sequence from clone RP3-433F14 on chromosome 6q15-16.3
             Contains a pseudogene similar to part of mitochondrial
             cytochrome C oxidase I and a pseudogene similar to part of
             NADH dehydrogenase 4L (MTND4L), complete sequence
          Length = 144984

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   cctgaaaaatttgccaaccc 327
             ||||||||||||||||||||
Sbjct: 13499 cctgaaaaatttgccaaccc 13480
to top
>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains
            the 5' end of the Mtmr3 gene for myotubularin related
            protein 3, two novel genes, the gene for a novel protein
            similar to human ASC-1 complex subunit P100, the gene for
            a novel protein similar to human ubiquinol-cytochrome C
            reductase complex 7.2 kDa protein UQCR10, the Cabp7 gene
            for calcium binding protein 7, the 3' end of the Nf2 gene
            for neurofibromatosis 2 and two CpG islands, complete
            sequence
          Length = 233997

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcctcagtattaaatacata 140
            ||||||||||||||||||||
Sbjct: 2575 gcctcagtattaaatacata 2594
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>emb|AL590604.1|SPBPB10D8 S.pombe chromosome II BAC pB10D8
          Length = 25389

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 569   cttcagcaagctgaagattttctatgtc 596
             |||||| |||||||||||||||| ||||
Sbjct: 24272 cttcagaaagctgaagattttctttgtc 24299
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>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 179187

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 583   agattttctatgtcttcatt 602
             ||||||||||||||||||||
Sbjct: 72343 agattttctatgtcttcatt 72324
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>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence
          Length = 137284

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tgatgtcactaatatattca 447
             ||||||||||||||||||||
Sbjct: 24651 tgatgtcactaatatattca 24632
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>gb|AC090348.4| Homo sapiens chromosome 18, clone RP11-834M2, complete sequence
          Length = 184119

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 348   ctctgtgattctatgcaaaacaaa 371
             |||||| |||||||||||||||||
Sbjct: 60461 ctctgtaattctatgcaaaacaaa 60438
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>dbj|AK096499.1| Homo sapiens cDNA FLJ39180 fis, clone OCBBF2004168
          Length = 2523

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 655  cccagagcaagggtgccagg 674
            ||||||||||||||||||||
Sbjct: 1125 cccagagcaagggtgccagg 1106
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>gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, complete sequence
          Length = 149059

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   ctttcaagagcctttttctt 635
             ||||||||||||||||||||
Sbjct: 56359 ctttcaagagcctttttctt 56378
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>gb|AC092814.2| Homo sapiens chromosome 1 clone RP11-565J7, complete sequence
          Length = 170245

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   actaatatattcagaacttt 454
             ||||||||||||||||||||
Sbjct: 92945 actaatatattcagaacttt 92926
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>emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, complete sequence
          Length = 161727

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   atgcaaaacaaacagggatt 379
             ||||||||||||||||||||
Sbjct: 36514 atgcaaaacaaacagggatt 36533
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>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone
            BACR30D19, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    atttctgttagttaaccttt 26
            ||||||||||||||||||||
Sbjct: 2920 atttctgttagttaaccttt 2901
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>gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complete sequence
          Length = 178734

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    tcacccaggaagaaggtttc 218
              ||||||||||||||||||||
Sbjct: 166270 tcacccaggaagaaggtttc 166251
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>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence
          Length = 171452

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    accccactccctatactttg 343
              ||||||||||||||||||||
Sbjct: 113323 accccactccctatactttg 113304
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>gb|AC159038.1| Pan troglodytes BAC clone CH251-156A12 from chromosome unknown, complete
              sequence
          Length = 183175

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 655    cccagagcaagggtgccagg 674
              ||||||||||||||||||||
Sbjct: 109416 cccagagcaagggtgccagg 109435
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>gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complete sequence
          Length = 197911

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 655    cccagagcaagggtgccagg 674
              ||||||||||||||||||||
Sbjct: 140261 cccagagcaagggtgccagg 140242
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>gb|AC093762.3| Homo sapiens BAC clone RP11-90L9 from 2, complete sequence
          Length = 77722

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  aatgtgaaaataagcaattt 511
            ||||||||||||||||||||
Sbjct: 6973 aatgtgaaaataagcaattt 6954
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>gb|AC024038.6|AC024038 Homo sapiens BAC clone RP11-349O6 from Y, complete sequence
          Length = 83621

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 288   ttttgtatacttctcaaaggcctgaaaa 315
             |||||||||||||| |||||||||||||
Sbjct: 39022 ttttgtatacttct-aaaggcctgaaaa 38996
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>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete
              sequence
          Length = 202001

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ctcatcttagtacactaagt 46
              ||||||||||||||||||||
Sbjct: 171279 ctcatcttagtacactaagt 171298
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>dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDK4
          Length = 78596

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tactttcaccaaacagcaaa 180
             ||||||||||||||||||||
Sbjct: 41112 tactttcaccaaacagcaaa 41131
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>emb|AJ340026.1|HSA340026 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-FA24R
          Length = 832

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 366 aacaaacagggattccacag 385
           ||||||||||||||||||||
Sbjct: 490 aacaaacagggattccacag 471
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>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete
              sequence
          Length = 230105

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     gatacatttgatgctatacggtat 78
              |||||||||||||||||| |||||
Sbjct: 187632 gatacatttgatgctatagggtat 187609
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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
             sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atttctgttagttaaccttt 26
             ||||||||||||||||||||
Sbjct: 72132 atttctgttagttaaccttt 72113
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>emb|AL935176.9| Mouse DNA sequence from clone RP23-38O10 on chromosome 2, complete
              sequence
          Length = 147619

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    tgtgaaaataagcaatttca 513
              ||||||||||||||||||||
Sbjct: 113739 tgtgaaaataagcaatttca 113758
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>emb|AL929267.14| Zebrafish DNA sequence from clone CH211-2M15 in linkage group 14,
             complete sequence
          Length = 175892

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tcacatttctgttagttaac 22
             ||||||||||||||||||||
Sbjct: 34460 tcacatttctgttagttaac 34441
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>gb|AC005152.1|AC005152 Homo sapiens chromosome 17, clone hRPC.1037_O_7, complete sequence
          Length = 126150

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   agtattaaatacatacttgt 145
             ||||||||||||||||||||
Sbjct: 47322 agtattaaatacatacttgt 47341
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>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135,
             complete sequence
          Length = 96988

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 569   cttcagcaagctgaagattttcta 592
             |||||||| |||||||||||||||
Sbjct: 61323 cttcagcacgctgaagattttcta 61300
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>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete
             sequence
          Length = 162175

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 442   tattcagaacttttgttcccacca 465
             |||||||| |||||||||||||||
Sbjct: 36495 tattcagatcttttgttcccacca 36472
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>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 151930

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   attttctatgtcttcattag 604
             ||||||||||||||||||||
Sbjct: 71893 attttctatgtcttcattag 71874
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>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete
             sequence
          Length = 226854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tgttagttaacctttctcat 31
             ||||||||||||||||||||
Sbjct: 74260 tgttagttaacctttctcat 74241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,037,820
Number of Sequences: 3902068
Number of extensions: 7037820
Number of successful extensions: 130162
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 129911
Number of HSP's gapped (non-prelim): 252
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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