Clone Name	rbags6a09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_472289.1| Oryza sativa (japonica cultivar-group), predic...	157	5e-35
2	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	157	5e-35
3	dbj|AK063403.1| Oryza sativa (japonica cultivar-group) cDNA clon...	157	5e-35
4	emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,...	157	5e-35
5	gb|AY110082.1| Zea mays CL50599_1 mRNA sequence	127	5e-26
6	ref|XM_506813.1| PREDICTED Oryza sativa (japonica cultivar-group...	74	6e-10
7	ref|XM_465922.1| Oryza sativa (japonica cultivar-group), mRNA	74	6e-10
8	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	74	6e-10
9	dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic D...	74	6e-10
10	dbj|AK100659.1| Oryza sativa (japonica cultivar-group) cDNA clon...	74	6e-10
11	dbj|AK099429.1| Oryza sativa (japonica cultivar-group) cDNA clon...	66	2e-07
12	emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...	44	0.56
13	emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20...	44	0.56
14	emb|AL840639.3| Mouse DNA sequence from clone RP23-156E17 on chr...	44	0.56
15	ref|NM_111250.2| Arabidopsis thaliana binding AT3G03790 transcri...	42	2.2
16	ref|NM_202484.1| Arabidopsis thaliana binding AT3G03790 transcri...	42	2.2
17	gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence	42	2.2
18	gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC...	42	2.2
19	emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...	42	2.2
20	dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...	42	2.2
21	emb|AJ617061.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, cl...	42	2.2
22	dbj|AK117198.1| Arabidopsis thaliana At3g03790 mRNA for unknown ...	42	2.2
23	gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete...	42	2.2
24	ref|NM_138421.1| Homo sapiens serum amyloid A-like 1 (SAAL1), mRNA	40	8.8
25	gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome	40	8.8
26	gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co...	40	8.8
27	ref|XM_521852.1| PREDICTED: Pan troglodytes similar to tryptopha...	40	8.8
28	ref|XM_581261.2| PREDICTED: Bos taurus hypothetical LOC505038 (L...	40	8.8
29	ref|XM_871078.1| PREDICTED: Bos taurus hypothetical protein LOC6...	40	8.8
30	gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp...	40	8.8
31	emb|AL513527.9| Human DNA sequence from clone RP11-530M23 on chr...	40	8.8
32	emb|AJ311754.1|CEP311754 Clarkia epilobioides partial pgiC2 gene...	40	8.8
33	gb|AC112641.3| Homo sapiens 3 BAC RP11-431I8 (Roswell Park Cance...	40	8.8
34	emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in...	40	8.8
35	emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 i...	40	8.8
36	emb|BX927378.12| Zebrafish DNA sequence from clone CH211-116K3 i...	40	8.8
37	emb|CR624243.1| full-length cDNA clone CS0DA009YL04 of Neuroblas...	40	8.8
38	emb|CR623466.1| full-length cDNA clone CS0DE006YJ05 of Placenta ...	40	8.8
39	dbj|AK123457.1| Homo sapiens cDNA FLJ41463 fis, clone BRSTN2017237	40	8.8
40	emb|CR616217.1| full-length cDNA clone CS0DH004YC04 of T cells (...	40	8.8
41	emb|CR597687.1| full-length cDNA clone CS0DJ006YI14 of T cells (...	40	8.8
42	emb|CR590267.1| full-length cDNA clone CS0DJ011YI17 of T cells (...	40	8.8
43	ref|XM_680258.1| PREDICTED: Danio rerio similar to Hiat1-prov pr...	40	8.8
44	emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in...	40	8.8
45	gb|DQ346675.1| Tetrahymena thermophila C-terminal crystallin fol...	40	8.8
46	dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, ...	40	8.8
47	dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, ...	40	8.8
48	emb|AL929201.6| Zebrafish DNA sequence from clone CH211-66G24 in...	40	8.8
49	gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, comple...	40	8.8
50	dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	8.8
51	emb|BX284685.8| Mouse DNA sequence from clone RP23-114J1 on chro...	40	8.8
52	gb|BC012010.1| Homo sapiens serum amyloid A-like 1, mRNA (cDNA c...	40	8.8
53	dbj|AP001050.1| Homo sapiens genomic DNA, chromosome 21, clone:K...	40	8.8

---

>ref|XM_472289.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2190

 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Minus

                                                                        
Query: 465  tctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaacct 524
            |||||||| ||||||||||||||||| || ||||| ||||| || ||||| || ||||||
Sbjct: 2153 tctgtaatgaccttaagaaggtccactggagttgctgcagggtccagctcgtggcaacct 2094

                                                                        
Query: 525  tccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgagaat 584
            |  |||||||||||||||||||| ||||||||||  |||||||||||| |||| ||||||
Sbjct: 2093 tttggggcattgttgccttcttccccagtcagcaggcgagaaggaacccgatgtgagaat 2034

                                                                       
Query: 585  cgaaacagctcaccctttggtatcctcctcacctccttggggtccatgtgcctatggaa 643
            || || |||||  ||||||||||||||||  |||| || || ||||| |||||||||||
Sbjct: 2033 cggaaaagctcttcctttggtatcctcctggcctctttcggatccatatgcctatggaa 1975

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Minus

                                                                            
Query: 465      tctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaacct 524
                |||||||| ||||||||||||||||| || ||||| ||||| || ||||| || ||||||
Sbjct: 19143190 tctgtaatgaccttaagaaggtccactggagttgctgcagggtccagctcgtggcaacct 19143131

                                                                            
Query: 525      tccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgagaat 584
                |  |||||||||||||||||||| ||||||||||  |||||||||||| |||| ||||||
Sbjct: 19143130 tttggggcattgttgccttcttccccagtcagcaggcgagaaggaacccgatgtgagaat 19143071

                                                                           
Query: 585      cgaaacagctcaccctttggtatcctcctcacctccttggggtccatgtgcctatggaa 643
                || || |||||  ||||||||||||||||  |||| || || ||||| |||||||||||
Sbjct: 19143070 cggaaaagctcttcctttggtatcctcctggcctctttcggatccatatgcctatggaa 19143012



 Score =  117 bits (59), Expect = 5e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                            
Query: 225      aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 284
                ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 19143413 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 19143356

                                                                            
Query: 285      gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 343
                |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 19143355 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 19143296

                  
Query: 344      ga 345
                ||
Sbjct: 19143295 ga 19143294

---

>dbj|AK063403.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A05, full
            insert sequence
          Length = 2337

 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Minus

                                                                        
Query: 465  tctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaacct 524
            |||||||| ||||||||||||||||| || ||||| ||||| || ||||| || ||||||
Sbjct: 1762 tctgtaatgaccttaagaaggtccactggagttgctgcagggtccagctcgtggcaacct 1703

                                                                        
Query: 525  tccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgagaat 584
            |  |||||||||||||||||||| ||||||||||  |||||||||||| |||| ||||||
Sbjct: 1702 tttggggcattgttgccttcttccccagtcagcaggcgagaaggaacccgatgtgagaat 1643

                                                                       
Query: 585  cgaaacagctcaccctttggtatcctcctcacctccttggggtccatgtgcctatggaa 643
            || || |||||  ||||||||||||||||  |||| || || ||||| |||||||||||
Sbjct: 1642 cggaaaagctcttcctttggtatcctcctggcctctttcggatccatatgcctatggaa 1584



 Score =  117 bits (59), Expect = 5e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                        
Query: 225  aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 284
            ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 1985 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 1928

                                                                        
Query: 285  gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 343
            |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 1927 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 1868

              
Query: 344  ga 345
            ||
Sbjct: 1867 ga 1866

---

>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score =  157 bits (79), Expect = 5e-35
 Identities = 154/179 (86%)
 Strand = Plus / Minus

                                                                         
Query: 465   tctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaacct 524
             |||||||| ||||||||||||||||| || ||||| ||||| || ||||| || ||||||
Sbjct: 76710 tctgtaatgaccttaagaaggtccactggagttgctgcagggtccagctcgtggcaacct 76651

                                                                         
Query: 525   tccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgagaat 584
             |  |||||||||||||||||||| ||||||||||  |||||||||||| |||| ||||||
Sbjct: 76650 tttggggcattgttgccttcttccccagtcagcaggcgagaaggaacccgatgtgagaat 76591

                                                                        
Query: 585   cgaaacagctcaccctttggtatcctcctcacctccttggggtccatgtgcctatggaa 643
             || || |||||  ||||||||||||||||  |||| || || ||||| |||||||||||
Sbjct: 76590 cggaaaagctcttcctttggtatcctcctggcctctttcggatccatatgcctatggaa 76532



 Score =  117 bits (59), Expect = 5e-23
 Identities = 108/122 (88%), Gaps = 3/122 (2%)
 Strand = Plus / Minus

                                                                         
Query: 225   aaatgcctaagaattaacagtcagaagtccacgacataagctgcttgccctggcagtatt 284
             ||||||||||||||||   ||||||| ||  |||||||||||||||||||||| ||  ||
Sbjct: 76933 aaatgcctaagaattat--gtcagaattctgcgacataagctgcttgccctggtagagtt 76876

                                                                         
Query: 285   gtccaagtcatcagccaaaaataagatggcataatagaac-taagacaccaacaaatgtt 343
             |||||||||||||||||||||||||||| |||| |||||| ||||  |||||||||||||
Sbjct: 76875 gtccaagtcatcagccaaaaataagatgacatactagaacttaagtgaccaacaaatgtt 76816

               
Query: 344   ga 345
             ||
Sbjct: 76815 ga 76814

---

>gb|AY110082.1| Zea mays CL50599_1 mRNA sequence
          Length = 821

 Score =  127 bits (64), Expect = 5e-26
 Identities = 136/160 (85%)
 Strand = Plus / Plus

                                                                       
Query: 471 ataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaaccttccggg 530
           |||||||| ||||||||||| || || |||||||| || |||||||| || |||| ||||
Sbjct: 651 ataaccttgagaaggtccactggagtggcagcagggtccagctcatggcagcctttcggg 710

                                                                       
Query: 531 gcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgagaatcgaaac 590
           |||||| |||| ||||| || ||||| |  |||||||||||| | |||||||| || |||
Sbjct: 711 gcattgctgccctcttcgcccgtcaggagacgagaaggaacccggtgcgagaaccggaac 770

                                                   
Query: 591 agctcaccctttggtatcctcctcacctccttggggtcca 630
           |||||  |||||||||||||||||||||||| ||| ||||
Sbjct: 771 agctcttcctttggtatcctcctcacctcctcgggatcca 810



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 264 gctgcttgccctggcagtattgtccaagtcatcagccaaaaataagatggc 314
           |||||||||||||| ||| ||||||||| |||||||| |||||||||||||
Sbjct: 443 gctgcttgccctggaagtgttgtccaagccatcagccgaaaataagatggc 493



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 219 tgttagaaatgcctaagaattaaca--gtcagaagtcc 254
           |||||| ||||||||||||||||||  |||||||||||
Sbjct: 388 tgttaggaatgcctaagaattaacaaggtcagaagtcc 425

---

>ref|XM_506813.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0052M16.36
            mRNA
          Length = 3114

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 462  acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
            ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 2494 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 2435

                                                                        
Query: 522  ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
            ||||  || ||||| ||||||||||| ||||| ||||  ||||||||||||  ||| |||
Sbjct: 2434 ccttttggagcattattgccttcttccccagtgagcagtcgagaaggaaccctatgtgag 2375

                                         
Query: 582  aatcgaaacagctcaccctttggtatcct 610
            || || || |||||  |||| ||||||||
Sbjct: 2374 aagcggaaaagctcttccttcggtatcct 2346

---

>ref|XM_465922.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3008

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 462  acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
            ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 2489 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 2430

                                                                        
Query: 522  ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
            ||||  || ||||| ||||||||||| ||||| ||||  ||||||||||||  ||| |||
Sbjct: 2429 ccttttggagcattattgccttcttccccagtgagcagtcgagaaggaaccctatgtgag 2370

                                         
Query: 582  aatcgaaacagctcaccctttggtatcct 610
            || || || |||||  |||| ||||||||
Sbjct: 2369 aagcggaaaagctcttccttcggtatcct 2341

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                            
Query: 462      acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
                ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 18329792 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 18329733

                                                                            
Query: 522      ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
                ||||  || ||||| ||||||||||| ||||| ||||  ||||||||||||  ||| |||
Sbjct: 18329732 ccttttggagcattattgccttcttccccagtgagcagtcgagaaggaaccctatgtgag 18329673

                                             
Query: 582      aatcgaaacagctcaccctttggtatcct 610
                || || || |||||  |||| ||||||||
Sbjct: 18329672 aagcggaaaagctcttccttcggtatcct 18329644

---

>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0052M16
          Length = 145423

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                          
Query: 462    acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
              ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 131005 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 130946

                                                                          
Query: 522    ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
              ||||  || ||||| ||||||||||| ||||| ||||  ||||||||||||  ||| |||
Sbjct: 130945 ccttttggagcattattgccttcttccccagtgagcagtcgagaaggaaccctatgtgag 130886

                                           
Query: 582    aatcgaaacagctcaccctttggtatcct 610
              || || || |||||  |||| ||||||||
Sbjct: 130885 aagcggaaaagctcttccttcggtatcct 130857

---

>dbj|AK100659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L15, full
            insert sequence
          Length = 3114

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 121/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 462  acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
            ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 2494 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 2435

                                                                        
Query: 522  ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
            ||||  || ||||| ||||||||||| ||||| ||||  ||||||||||||  ||| |||
Sbjct: 2434 ccttttggagcattattgccttcttccccagtgagcagtcgagaaggaaccctatgtgag 2375

                                         
Query: 582  aatcgaaacagctcaccctttggtatcct 610
            || || || |||||  |||| ||||||||
Sbjct: 2374 aagcggaaaagctcttccttcggtatcct 2346

---

>dbj|AK099429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012C24, full
            insert sequence
          Length = 3008

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 120/149 (80%)
 Strand = Plus / Minus

                                                                        
Query: 462  acctctgtaataaccttaagaaggtccaccggggttgcagcaggatcaagctcatgacaa 521
            ||||| || ||||||||||||||||| || || || |||||||| || |  ||||| |||
Sbjct: 2489 acctcagtgataaccttaagaaggtcaactggagtagcagcagggtctaattcatggcaa 2430

                                                                        
Query: 522  ccttccggggcattgttgccttcttcaccagtcagcaaccgagaaggaacctgatgcgag 581
            ||||  || ||||| ||||||||||| ||||| ||||  ||||||| ||||  ||| |||
Sbjct: 2429 ccttttggagcattattgccttcttccccagtgagcagtcgagaagtaaccctatgtgag 2370

                                         
Query: 582  aatcgaaacagctcaccctttggtatcct 610
            || || || |||||  |||| ||||||||
Sbjct: 2369 aagcggaaaagctcttccttcggtatcct 2341

---

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 614     cacctccttggggtccatgtgc 635
               ||||||||||||||||||||||
Sbjct: 2277537 cacctccttggggtccatgtgc 2277558

---

>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3,
             complete sequence
          Length = 116350

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 566   aggaacctgatgcgagaatcgaaaca 591
             |||||||||||| |||||||||||||
Sbjct: 77851 aggaacctgatgagagaatcgaaaca 77826

---

>emb|AL840639.3| Mouse DNA sequence from clone RP23-156E17 on chromosome 2, complete
              sequence
          Length = 192074

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 405    gtgttcagagttgttgccctct 426
              ||||||||||||||||||||||
Sbjct: 142862 gtgttcagagttgttgccctct 142883

---

>ref|NM_111250.2| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.1 mRNA, complete cds
          Length = 4023

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 tgcttcttttactctagaaga 190
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

---

>ref|NM_202484.1| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.2 mRNA, complete cds
          Length = 4032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 tgcttcttttactctagaaga 190
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

---

>gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence
          Length = 154295

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 614    cacctccttggggtccatgtg 634
              |||||||||||||||||||||
Sbjct: 125329 cacctccttggggtccatgtg 125309

---

>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence,
             complete sequence
          Length = 101410

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 170   tgcttcttttactctagaaga 190
             |||||||||||||||||||||
Sbjct: 53272 tgcttcttttactctagaaga 53252

---

>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 496    ttgcagcaggatcaagctcat 516
              |||||||||||||||||||||
Sbjct: 183501 ttgcagcaggatcaagctcat 183521

---

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     cacctccttggggtccatgtg 634
               |||||||||||||||||||||
Sbjct: 2735619 cacctccttggggtccatgtg 2735599

---

>emb|AJ617061.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np239
          Length = 165

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 505 gatcaagctcatgacaacctt 525
           |||||||||||||||||||||
Sbjct: 73  gatcaagctcatgacaacctt 93

---

>dbj|AK117198.1| Arabidopsis thaliana At3g03790 mRNA for unknown protein, complete
           cds, clone: RAFL16-74-J10
          Length = 4024

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 170 tgcttcttttactctagaaga 190
           |||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaaga 871

---

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     cacctccttggggtccatgtg 634
               |||||||||||||||||||||
Sbjct: 2756147 cacctccttggggtccatgtg 2756127

---

>ref|NM_138421.1| Homo sapiens serum amyloid A-like 1 (SAAL1), mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 613 caacaaatgttgacttgctg 632

---

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     cagcagtctgcgccgccacg 452
               ||||||||||||||||||||
Sbjct: 2104033 cagcagtctgcgccgccacg 2104052

---

>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    aactaagacaccaacaaatg 341
              ||||||||||||||||||||
Sbjct: 119412 aactaagacaccaacaaatg 119431

---

>ref|XM_521852.1| PREDICTED: Pan troglodytes similar to tryptophan hydroxylase 1;
            tryptophan 5-monooxygenase; tryptophan hydroxylase
            (tryptophan 5-monooxygenase) (LOC466453), mRNA
          Length = 3222

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  caacaaatgttgacttgctg 352
            ||||||||||||||||||||
Sbjct: 1037 caacaaatgttgacttgctg 1056

---

>ref|XM_581261.2| PREDICTED: Bos taurus hypothetical LOC505038 (LOC505038), mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 592 caacaaatgttgacttgctg 611

---

>ref|XM_871078.1| PREDICTED: Bos taurus hypothetical protein LOC618752 (LOC618752),
           mRNA
          Length = 546

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 344 caacaaatgttgacttgctg 363

---

>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    aactaagacaccaacaaatg 341
              ||||||||||||||||||||
Sbjct: 124071 aactaagacaccaacaaatg 124052

---

>emb|AL513527.9| Human DNA sequence from clone RP11-530M23 on chromosome 6 Contains part
             of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM), complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   atgcctaagaattaacagtcagaa 250
             |||||||||||||| |||||||||
Sbjct: 82540 atgcctaagaattatcagtcagaa 82517

---

>emb|AJ311754.1|CEP311754 Clarkia epilobioides partial pgiC2 gene for cytosolic phosphoglucose
            isomerase, exons 4-16
          Length = 4209

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 366  acatttcacacttcagacacccaa 389
            |||||||| |||||||||||||||
Sbjct: 3093 acatttcaaacttcagacacccaa 3070

---

>gb|AC112641.3| Homo sapiens 3 BAC RP11-431I8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165619

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tcttcattcacctctgtaat 472
             ||||||||||||||||||||
Sbjct: 91078 tcttcattcacctctgtaat 91097

---

>emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in linkage group 14,
             complete sequence
          Length = 130789

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 535   tgttgccttcttcaccagtcagca 558
             ||||||||| ||||||||||||||
Sbjct: 58027 tgttgccttgttcaccagtcagca 58050

---

>emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 in linkage group 14,
              complete sequence
          Length = 156128

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 535    tgttgccttcttcaccagtcagca 558
              ||||||||| ||||||||||||||
Sbjct: 121603 tgttgccttgttcaccagtcagca 121580

---

>emb|BX927378.12| Zebrafish DNA sequence from clone CH211-116K3 in linkage group 5,
              complete sequence
          Length = 123661

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tcccccctcaaacttgatgg 68
              ||||||||||||||||||||
Sbjct: 102925 tcccccctcaaacttgatgg 102906

---

>emb|CR624243.1| full-length cDNA clone CS0DA009YL04 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1503

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 627 caacaaatgttgacttgctg 646

---

>emb|CR623466.1| full-length cDNA clone CS0DE006YJ05 of Placenta of Homo sapiens
           (human)
          Length = 1484

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 598 caacaaatgttgacttgctg 617

---

>dbj|AK123457.1| Homo sapiens cDNA FLJ41463 fis, clone BRSTN2017237
          Length = 1521

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 625 caacaaatgttgacttgctg 644

---

>emb|CR616217.1| full-length cDNA clone CS0DH004YC04 of T cells (Jurkat cell line)
           of Homo sapiens (human)
          Length = 1487

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 591 caacaaatgttgacttgctg 610

---

>emb|CR597687.1| full-length cDNA clone CS0DJ006YI14 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1487

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 627 caacaaatgttgacttgctg 646

---

>emb|CR590267.1| full-length cDNA clone CS0DJ011YI17 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1451

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 579 caacaaatgttgacttgctg 598

---

>ref|XM_680258.1| PREDICTED: Danio rerio similar to Hiat1-prov protein (LOC557243),
           mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 tcagttcagtgttcagagtt 416
           ||||||||||||||||||||
Sbjct: 760 tcagttcagtgttcagagtt 779

---

>emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in linkage group 14,
              complete sequence
          Length = 201070

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 535    tgttgccttcttcaccagtcagca 558
              ||||||||| ||||||||||||||
Sbjct: 184553 tgttgccttgttcaccagtcagca 184530

---

>gb|DQ346675.1| Tetrahymena thermophila C-terminal crystallin fold containing
           protein 12p (CCF12) mRNA, complete cds; macronuclear
          Length = 1974

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 467 tgtaataaccttaagaaggt 486
           ||||||||||||||||||||
Sbjct: 904 tgtaataaccttaagaaggt 885

---

>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
            sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  ttcagtgttcagagttgttg 420
            ||||||||||||||||||||
Sbjct: 7944 ttcagtgttcagagttgttg 7925

---

>dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, map 22, complete
             sequences
          Length = 144611

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   ttcagtgttcagagttgttg 420
             ||||||||||||||||||||
Sbjct: 75305 ttcagtgttcagagttgttg 75286

---

>emb|AL929201.6| Zebrafish DNA sequence from clone CH211-66G24 in linkage group 8,
             complete sequence
          Length = 186121

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   tcagttcagtgttcagagtt 416
             ||||||||||||||||||||
Sbjct: 44081 tcagttcagtgttcagagtt 44062

---

>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence
          Length = 203229

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    atcaagctcatgacaacctt 525
              ||||||||||||||||||||
Sbjct: 119849 atcaagctcatgacaacctt 119868

---

>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    ttcagtgttcagagttgttg 420
              ||||||||||||||||||||
Sbjct: 282324 ttcagtgttcagagttgttg 282305

---

>emb|BX284685.8| Mouse DNA sequence from clone RP23-114J1 on chromosome 2, complete
             sequence
          Length = 69833

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 497   tgcagcaggatcaagctcatgaca 520
             ||||||| ||||||||||||||||
Sbjct: 66508 tgcagcatgatcaagctcatgaca 66531

---

>gb|BC012010.1| Homo sapiens serum amyloid A-like 1, mRNA (cDNA clone MGC:21579
           IMAGE:4473003), complete cds
          Length = 1527

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 caacaaatgttgacttgctg 352
           ||||||||||||||||||||
Sbjct: 613 caacaaatgttgacttgctg 632

---

>dbj|AP001050.1| Homo sapiens genomic DNA, chromosome 21, clone:KB953G5, MX1-D21S171
             region, complete sequence
          Length = 98992

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   ttcagtgttcagagttgttg 420
             ||||||||||||||||||||
Sbjct: 60241 ttcagtgttcagagttgttg 60222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,182,028
Number of Sequences: 3902068
Number of extensions: 5182028
Number of successful extensions: 94799
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94563
Number of HSP's gapped (non-prelim): 230
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---