| Clone Name | rbags6a06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-r... | 66 | 2e-08 | 2 | gb|AC005598.6|AC005598 Homo sapiens chromosome 4 clone C0024K08 ... | 38 | 4.9 | 3 | gb|AC127242.3| Mus musculus BAC clone RP24-404P19 from 12, compl... | 38 | 4.9 | 4 | gb|AC134601.4| Mus musculus BAC clone RP23-242M10 from 12, compl... | 38 | 4.9 |
|---|
>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein (wrsi5-1) mRNA, complete cds Length = 608 Score = 65.9 bits (33), Expect = 2e-08 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 15 tacatattgttggccgtatgacgcggcccacacacaagcatagcaacacgatgactgctc 74 ||||||||||||||||||| | || |||||| | |||||||| | | |||||||||| Sbjct: 477 tacatattgttggccgtatagcacgacccacagagaagcatagg--cgccatgactgctc 420 Query: 75 atctcatctgngctttattctangcggcac 104 |||||||||| |||||||| || ||||||| Sbjct: 419 atctcatctgagctttattttaggcggcac 390
>gb|AC005598.6|AC005598 Homo sapiens chromosome 4 clone C0024K08 map 4p16, complete sequence Length = 166743 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 cggcccacacacaagcata 56 ||||||||||||||||||| Sbjct: 40264 cggcccacacacaagcata 40246
>gb|AC127242.3| Mus musculus BAC clone RP24-404P19 from 12, complete sequence Length = 171990 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 acacacaagcatagcaaca 62 ||||||||||||||||||| Sbjct: 122060 acacacaagcatagcaaca 122078
>gb|AC134601.4| Mus musculus BAC clone RP23-242M10 from 12, complete sequence Length = 171767 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 acacacaagcatagcaaca 62 ||||||||||||||||||| Sbjct: 123981 acacacaagcatagcaaca 123963 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 494,509 Number of Sequences: 3902068 Number of extensions: 494509 Number of successful extensions: 27322 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27316 Number of HSP's gapped (non-prelim): 6 length of query: 108 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 87 effective length of database: 17,151,101,840 effective search space: 1492145860080 effective search space used: 1492145860080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)