ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5l04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105329.1| Zea mays PCO071652 mRNA sequence 281 1e-72
2dbj|AK120947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 9e-71
3gb|AY105826.1| Zea mays PCO071651 mRNA sequence 198 2e-47
4dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
5ref|XM_464178.1| Oryza sativa (japonica cultivar-group), mRNA 76 2e-10
6dbj|AK119431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
7gb|AF311222.1|AF311222 Saccharum hybrid cultivar C2H2 zinc-finge... 60 1e-05
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
9dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
10dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
11ref|NM_128268.2| Arabidopsis thaliana SE (SERRATE); transcriptio... 58 4e-05
12gb|AY143937.1| Arabidopsis thaliana At2g27100/T20P8.15 mRNA, com... 58 4e-05
13gb|AY142569.1| Arabidopsis thaliana unknown protein (At2g27100) ... 58 4e-05
14gb|AY039915.1| Arabidopsis thaliana unknown protein (At2g27100) ... 58 4e-05
15gb|AF428305.1|AF428305 Arabidopsis thaliana At2g27100/T20P8.15 m... 58 4e-05
16gb|AF311221.1|AF311221 Arabidopsis thaliana C2H2 zinc-finger pro... 58 4e-05
17ref|XM_483342.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-04
18dbj|AK120996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
19dbj|AK107181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
20dbj|AK069175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
21gb|AF311223.1|AF311223 Zea mays C2H2 zinc-finger protein (SE1A) ... 50 0.009
22gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Canc... 44 0.58
23gb|AC158621.9| Mus musculus 10 BAC RP23-294J10 (Roswell Park Can... 44 0.58
24gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp... 42 2.3
25emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on ch... 42 2.3
26gb|AC160112.2| Mus musculus BAC clone RP24-80F17 from chromosome... 42 2.3
27gb|AC170804.2| Mus musculus BAC clone RP24-435B12 from chromosom... 40 9.0
28gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, co... 40 9.0
29gb|AC005550.1| Homo sapiens PAC clone RP4-620P6 from 7, complete... 40 9.0
30emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on ch... 40 9.0
31emb|AL133462.23| Human DNA sequence from clone RP11-108A16 on ch... 40 9.0
32emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 o... 40 9.0
33gb|AC092919.5| Homo sapiens 3q BAC RP11-185E8 (Roswell Park Canc... 40 9.0
34gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G1... 40 9.0
35gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, compl... 40 9.0
36gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complet... 40 9.0
37gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C... 40 9.0
38dbj|AB091509.1| Penicillium chrysogenum mRNA for cystein synthas... 40 9.0
39gb|AC012380.1|AC012380 Genomic Sequence For Homo sapiens Clone 1... 40 9.0 
>gb|AY105329.1| Zea mays PCO071652 mRNA sequence
          Length = 1271

 Score =  281 bits (142), Expect = 1e-72
 Identities = 391/473 (82%), Gaps = 7/473 (1%)
 Strand = Plus / Minus

                                                                        
Query: 146  cctacaaacttctgtagtcaagaacagtaacttcctcgtcaggggcatcgagatcattat 205
            ||||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || ||||
Sbjct: 1011 cctacaagcttctgtagtcaaggacagtgacttcctcatcaggagcatcgaggtcgttat 952

                                                                        
Query: 206  agcttcgcagacgtcgaggatcacgatggaaagatggtggcatggctataattggtgttg 265
            | |||| ||| || ||||||||| |  |||||  ||| ||||| |||||||| |||| ||
Sbjct: 951  aacttctcaggcggcgaggatcatggcggaaatttggaggcatagctataatcggtgctg 892

                                                                        
Query: 266  ggcccccgcccatcatcgatccaagcactcctgagttgccatgaggtccgccatttggtt 325
            |||| ||   |||||| |  ||||||| ||| |  |||||||| ||| ||||||||||||
Sbjct: 891  ggccacc---catcattggcccaagcattccagcattgccatgtggtgcgccatttggtt 835

                                                                        
Query: 326  cgaatgcggaaggt----ccttgctctctcagcatatgcatggctatttctggaggtgca 381
            | || |  | ||||    ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 834  caaaaggaggaggtggccccttgctctctcagcatatgcatcgctatctctggaggtgca 775

                                                                        
Query: 382  ggaacaaatggtcccaatggaccagcaccgggaacaggcatcaatatcggtggagcaggg 441
            ||||||||||| ||||| ||||||||||| || || |||||||||||||||||||| |||
Sbjct: 774  ggaacaaatgggcccaagggaccagcaccaggtactggcatcaatatcggtggagctggg 715

                                                                        
Query: 442  aattcagccgaaaaaggagcattggagcctcttccacggaaggaatcaaacatctgatcg 501
            ||||||||   |||||||||||| |||   | ||| |||||   ||||||||||||||| 
Sbjct: 714  aattcagcaacaaaaggagcattcgagggccgtccgcggaaaccatcaaacatctgatca 655

                                                                        
Query: 502  tcaggtccatcacggcttggagagccatcacctctaccatgtctgcctccatctttatct 561
            ||||| ||||||||||||||||||   |||||||||||||  ||| |||||||| |||| 
Sbjct: 654  tcaggcccatcacggcttggagagtggtcacctctaccatacctgactccatctctatca 595

                                                                 
Query: 562  gccctatcatattctctgcgattgccacggtcatatctcagacgactatccat 614
            ||  ||||||  ||||||  | ||||||||||| || |||||||||| |||||
Sbjct: 594  gctttatcatggtctctgttactgccacggtcaaatttcagacgactgtccat 542
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>dbj|AK120947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038B04, full
            insert sequence
          Length = 2541

 Score =  276 bits (139), Expect = 9e-71
 Identities = 244/279 (87%)
 Strand = Plus / Minus

                                                                        
Query: 340  ccttgctctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaat 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 2091 ccttgctctctcagcatatgcatggctatttctggaggtgcaggaacaaatggacccaaa 2032

                                                                        
Query: 400  ggaccagcaccgggaacaggcatcaatatcggtggagcagggaattcagccgaaaaagga 459
            ||||||||||| |||| ||||||||| || || ||||| || | |||||    |||||||
Sbjct: 2031 ggaccagcaccaggaataggcatcaaaattggcggagcgggaagttcaggaacaaaagga 1972

                                                                        
Query: 460  gcattggagcctcttccacggaaggaatcaaacatctgatcgtcaggtccatcacggctt 519
            ||||| |  ||||  |||||||| | ||||||||||||||| ||||  |||||| | |||
Sbjct: 1971 gcatttggacctcgcccacggaaagcatcaaacatctgatcatcagcgccatcaagactt 1912

                                                                        
Query: 520  ggagagccatcacctctaccatgtctgcctccatctttatctgccctatcatattctctg 579
            ||||| | |||||||||||||| ||||| ||||||| | |||||||||||||||||||| 
Sbjct: 1911 ggagaacgatcacctctaccatatctgcttccatctctctctgccctatcatattctcta 1852

                                                   
Query: 580  cgattgccacggtcatatctcagacgactatccatacca 618
            |||||| |||||||||||||||||||| |||||||||||
Sbjct: 1851 cgattggcacggtcatatctcagacgattatccatacca 1813



 Score =  109 bits (55), Expect = 1e-20
 Identities = 138/165 (83%), Gaps = 3/165 (1%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctacaaacttctgtagtcaagaacagtaacttcctcgtcaggggcatcgagatcattata 206
            |||||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 2284 ctacaaacttctgtagtcaagaacggtaacttcctcgtccggagcatcaaggtcattgta 2225

                                                                        
Query: 207  gcttcgcagacgtcgaggatcacgatggaaagatggtggcatggctataattggtgttgg 266
             ||||||| ||| ||||||||  || | |||||||| ||||||| ||||||||| |  ||
Sbjct: 2224 acttcgcaaacggcgaggatcttgacgaaaagatggaggcatggttataattggcgcagg 2165

                                                         
Query: 267  gcccccgcccatcatcgatccaagcactcctgagttgccatgagg 311
                || |||||||| | |||||||||||||| |||| |||||||
Sbjct: 2164 ---accacccatcattggtccaagcactcctgggttggcatgagg 2123
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>gb|AY105826.1| Zea mays PCO071651 mRNA sequence
          Length = 594

 Score =  198 bits (100), Expect = 2e-47
 Identities = 233/276 (84%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                       
Query: 340 ccttgctctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaat 399
           ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  
Sbjct: 567 ccttgctctctcagcatatgcatcgctatctctggaggtgcaggaacaaatggtcctagg 508

                                                                       
Query: 400 ggaccagcaccgggaacaggcatcaatatcggtggagcagggaattcagccgaaaaagga 459
           ||||||||||| || || |||||||||||||||||||  |||||||||||   |||||||
Sbjct: 507 ggaccagcaccaggtactggcatcaatatcggtggaggggggaattcagcaacaaaagga 448

                                                                       
Query: 460 gcattgga-gcctcttccacggaaggaatcaaacatctgatcgtcaggtccatcacggct 518
           ||||| || | |  | ||||||||   ||||||||||||||| ||||| |||||||||||
Sbjct: 447 gcattagagggccgtcccacggaaaccatcaaacatctgatcatcaggcccatcacggct 388

                                                                       
Query: 519 tggagagccatcacctctaccatgtctgcctccatctttatctgccctatcatattctct 578
           |||||||  |||  ||||||||| ||||||||||| | | || ||  |||||| |||| |
Sbjct: 387 tggagagtgatcgtctctaccatatctgcctccatgtctctcagctttatcatgttcttt 328

                                               
Query: 579 gcgattgccacggtcatatctcagacgactatccat 614
           |  | ||||||||||| || |||||||||| |||||
Sbjct: 327 gttactgccacggtcaaatttcagacgactgtccat 292
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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0545E05
          Length = 163229

 Score =  167 bits (84), Expect = 6e-38
 Identities = 183/216 (84%)
 Strand = Plus / Plus

                                                                          
Query: 403    ccagcaccgggaacaggcatcaatatcggtggagcagggaattcagccgaaaaaggagca 462
              |||||||| |||| ||||||||| || || ||||| || | |||||    ||||||||||
Sbjct: 149906 ccagcaccaggaataggcatcaaaattggcggagcgggaagttcaggaacaaaaggagca 149965

                                                                          
Query: 463    ttggagcctcttccacggaaggaatcaaacatctgatcgtcaggtccatcacggcttgga 522
              || |  ||||  |||||||| | ||||||||||||||| ||||  |||||| | ||||||
Sbjct: 149966 tttggacctcgcccacggaaagcatcaaacatctgatcatcagcgccatcaagacttgga 150025

                                                                          
Query: 523    gagccatcacctctaccatgtctgcctccatctttatctgccctatcatattctctgcga 582
              || | |||||||||||||| ||||| ||||||| | |||||||||||||||||||| |||
Sbjct: 150026 gaacgatcacctctaccatatctgcttccatctctctctgccctatcatattctctacga 150085

                                                  
Query: 583    ttgccacggtcatatctcagacgactatccatacca 618
              ||| |||||||||||||||||||| |||||||||||
Sbjct: 150086 ttggcacggtcatatctcagacgattatccatacca 150121



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                          
Query: 340    ccttgctctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaat 399
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 149758 ccttgctctctcagcatatgcatggctatttctggaggtgcaggaacaaatggacccaaa 149817

                  
Query: 400    ggac 403
              ||||
Sbjct: 149818 ggac 149821



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                       
Query: 147    ctacaaacttctgtagtcaagaacagtaacttcctcgtcaggggcatcgagatcatt 203
              |||||||||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct: 149280 ctacaaacttctgtagtcaagaacggtaacttcctcgtccggagcatcaaggtcatt 149336



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 274    cccatcatcgatccaagcactcctgagttgccatgagg 311
              |||||||| | |||||||||||||| |||| |||||||
Sbjct: 149689 cccatcattggtccaagcactcctgggttggcatgagg 149726
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>ref|XM_464178.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2489

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 370  tctggaggtgcaggaacaaatggtcccaatggaccagcaccgggaacagg 419
            ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 1881 tctggaggtgcaggaacaaatggacccaatggaccagcaccaggcacagg 1832



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctacaaacttctgtagtcaagaacagtaacttcctcgtcaggggcatcgagatcattata 206
            |||||||||||||||||| |  | ||| ||||| || ||||| || || ||||| || ||
Sbjct: 2017 ctacaaacttctgtagtccacgagagtgacttcatcatcaggagcgtcaagatctttgta 1958

                              
Query: 207  gcttcgcagacgtcgagg 224
            |||||||||||| |||||
Sbjct: 1957 gcttcgcagacgacgagg 1940
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>dbj|AK119431.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-A04, full
            insert sequence
          Length = 2489

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 370  tctggaggtgcaggaacaaatggtcccaatggaccagcaccgggaacagg 419
            ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 1881 tctggaggtgcaggaacaaatggacccaatggaccagcaccaggcacagg 1832



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctacaaacttctgtagtcaagaacagtaacttcctcgtcaggggcatcgagatcattata 206
            |||||||||||||||||| |  | ||| ||||| || ||||| || || ||||| || ||
Sbjct: 2017 ctacaaacttctgtagtccacgagagtgacttcatcatcaggagcgtcaagatctttgta 1958

                              
Query: 207  gcttcgcagacgtcgagg 224
            |||||||||||| |||||
Sbjct: 1957 gcttcgcagacgacgagg 1940
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>gb|AF311222.1|AF311222 Saccharum hybrid cultivar C2H2 zinc-finger protein SERRATE mRNA,
           partial cds
          Length = 1256

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 349 ctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggaccagca 408
           |||| |||||||||||| | ||| || |||||||||| ||| ||||| | ||||||||||
Sbjct: 827 ctcaacatatgcatggcaacttccggtggtgcaggaataaacggtccgagtggaccagca 768

                         
Query: 409 ccgggaacaggcat 422
           || || ||||||||
Sbjct: 767 ccaggcacaggcat 754
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                 
Query: 370     tctggaggtgcaggaacaaatggtcccaatggac 403
               ||||||||||||||||||||||| ||||||||||
Sbjct: 2733413 tctggaggtgcaggaacaaatggacccaatggac 2733380
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0050G13
          Length = 150685

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 370  tctggaggtgcaggaacaaatggtcccaatggac 403
            ||||||||||||||||||||||| ||||||||||
Sbjct: 1641 tctggaggtgcaggaacaaatggacccaatggac 1608
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>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0479D12
          Length = 148362

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 370    tctggaggtgcaggaacaaatggtcccaatggac 403
              ||||||||||||||||||||||| ||||||||||
Sbjct: 135635 tctggaggtgcaggaacaaatggacccaatggac 135602
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>ref|NM_128268.2| Arabidopsis thaliana SE (SERRATE); transcription factor AT2G27100
            (SE) mRNA, complete cds
          Length = 2501

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 2007 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1959
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>gb|AY143937.1| Arabidopsis thaliana At2g27100/T20P8.15 mRNA, complete cds
          Length = 2163

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1970 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1922
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>gb|AY142569.1| Arabidopsis thaliana unknown protein (At2g27100) mRNA, complete cds
          Length = 2194

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1970 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1922
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>gb|AY039915.1| Arabidopsis thaliana unknown protein (At2g27100) mRNA, complete cds
          Length = 2473

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 2006 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1958
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>gb|AF428305.1|AF428305 Arabidopsis thaliana At2g27100/T20P8.15 mRNA, complete cds
          Length = 2454

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1999 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1951
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>gb|AF311221.1|AF311221 Arabidopsis thaliana C2H2 zinc-finger protein SERRATE (SE) mRNA,
            complete cds
          Length = 2439

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 376  ggtgcaggaacaaatggtcccaatggaccagcaccgggaacaggcatca 424
            ||||| || ||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 1994 ggtgctggtacaaatggtcccagtggcccagcaccaggaacaggcatca 1946
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>ref|XM_483342.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2267

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  tctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggacca 405
            ||||||| |||| |||| || | ||| || |||||||||| ||||||||| | ||| |||
Sbjct: 1851 tctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctagtgggcca 1792

                                
Query: 406  gcaccgggaacaggcatcaa 425
            ||||| || |||||||||||
Sbjct: 1791 gcaccaggcacaggcatcaa 1772
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>dbj|AK120996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044G03, full
            insert sequence
          Length = 2849

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  tctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggacca 405
            ||||||| |||| |||| || | ||| || |||||||||| ||||||||| | ||| |||
Sbjct: 2067 tctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctagtgggcca 2008

                                
Query: 406  gcaccgggaacaggcatcaa 425
            ||||| || |||||||||||
Sbjct: 2007 gcaccaggcacaggcatcaa 1988
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>dbj|AK107181.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H03, full
           insert sequence
          Length = 2249

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 346 tctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggacca 405
           ||||||| |||| |||| || | ||| || |||||||||| ||||||||| | ||| |||
Sbjct: 153 tctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctagtgggcca 94

                               
Query: 406 gcaccgggaacaggcatcaa 425
           ||||| || |||||||||||
Sbjct: 93  gcaccaggcacaggcatcaa 74
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>dbj|AK069175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J12, full
            insert sequence
          Length = 2267

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  tctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggacca 405
            ||||||| |||| |||| || | ||| || |||||||||| ||||||||| | ||| |||
Sbjct: 1851 tctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctagtgggcca 1792

                                
Query: 406  gcaccgggaacaggcatcaa 425
            ||||| || |||||||||||
Sbjct: 1791 gcaccaggcacaggcatcaa 1772
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>gb|AF311223.1|AF311223 Zea mays C2H2 zinc-finger protein (SE1A) precursor RNA, partial cds
          Length = 2141

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  tctctcagcatatgcatggctatttctggaggtgcaggaacaaatggtcccaatggacca 405
            ||||||| |||||||||||| | ||| || ||||| |||| ||| ||||| |  ||||||
Sbjct: 1698 tctctcaacatatgcatggcaacttcgggtggtgcgggaataaacggtccgagcggacca 1639

                             
Query: 406  gcaccgggaacaggcat 422
            ||||| || ||||||||
Sbjct: 1638 gcaccaggcacaggcat 1622
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>gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 171839

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 353    gcatatgcatggctatttctggaggt 378
              |||||||||| |||||||||||||||
Sbjct: 146375 gcatatgcatagctatttctggaggt 146350
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>gb|AC158621.9| Mus musculus 10 BAC RP23-294J10 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 172764

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 353   gcatatgcatggctatttctggaggt 378
             |||||||||| |||||||||||||||
Sbjct: 69576 gcatatgcatagctatttctggaggt 69551
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>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     aaaaaatagcacatcttcctc 110
              |||||||||||||||||||||
Sbjct: 122170 aaaaaatagcacatcttcctc 122150
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>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two
              novel genes, complete sequence
          Length = 159399

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 151    aaacttctgtagtcaagaacagtaa 175
              ||||||||||||||||||| |||||
Sbjct: 149430 aaacttctgtagtcaagaatagtaa 149406
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>gb|AC160112.2| Mus musculus BAC clone RP24-80F17 from chromosome 12, complete sequence
          Length = 230823

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 479   ggaaggaatcaaacatctgat 499
             |||||||||||||||||||||
Sbjct: 79659 ggaaggaatcaaacatctgat 79679
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>gb|AC170804.2| Mus musculus BAC clone RP24-435B12 from chromosome 6, complete
            sequence
          Length = 143675

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  ctatgcctctgtattgcctg 130
            ||||||||||||||||||||
Sbjct: 6109 ctatgcctctgtattgcctg 6090
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>gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, complete sequence
          Length = 203865

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  ctatgcctctgtattgcctg 130
            ||||||||||||||||||||
Sbjct: 9657 ctatgcctctgtattgcctg 9676
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>gb|AC005550.1| Homo sapiens PAC clone RP4-620P6 from 7, complete sequence
          Length = 133237

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tcagcatatgcatggctatt 369
             ||||||||||||||||||||
Sbjct: 23304 tcagcatatgcatggctatt 23285
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>emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on chromosome 10 Contains the
              PPP1R3C gene for protein phosphatase 1 regulatory
              (inhibitor) subunit 3C, a glyceraldehyde-3-phosphate
              dehydrogenase (GAPD) pseudogene and a CpG island, complete
              sequence
          Length = 173119

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 421    atcaatatcggtggagcagggaat 444
              ||||||||| ||||||||||||||
Sbjct: 127403 atcaatatcagtggagcagggaat 127426
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>emb|AL133462.23| Human DNA sequence from clone RP11-108A16 on chromosome 20 Contains the
             5' end of the gene for a novel protein (LOC284776),
             complete sequence
          Length = 84478

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   accatgtctgcctccatctt 556
             ||||||||||||||||||||
Sbjct: 65176 accatgtctgcctccatctt 65157
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>emb|AL021326.1|HS124C6 Human DNA sequence from clone RP1-124C6 on chromosome 6q21 Contains a
             putative novel gene, complete sequence
          Length = 103567

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    aaatctgacaacacattaca 80
             ||||||||||||||||||||
Sbjct: 57963 aaatctgacaacacattaca 57944
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>gb|AC092919.5| Homo sapiens 3q BAC RP11-185E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101121

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   tcctatgcctctgtattgcctgta 132
             ||||||| ||||||||||||||||
Sbjct: 23866 tcctatgtctctgtattgcctgta 23843
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>gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G12, complete sequence
          Length = 171390

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     atccttttctgtgactgcataata 30
             |||||||||| |||||||||||||
Sbjct: 61760 atccttttctatgactgcataata 61737
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>gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, complete sequence
          Length = 163855

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   aaggtccttgctctctcagc 354
             ||||||||||||||||||||
Sbjct: 41179 aaggtccttgctctctcagc 41160
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>gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complete sequence
          Length = 134841

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   atggctataattggtgttgg 266
             ||||||||||||||||||||
Sbjct: 57875 atggctataattggtgttgg 57894
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>gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C11, complete sequence
          Length = 151365

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 7    atccttttctgtgactgcataata 30
            |||||||||| |||||||||||||
Sbjct: 9404 atccttttctatgactgcataata 9381
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>dbj|AB091509.1| Penicillium chrysogenum mRNA for cystein synthase, complete cds
          Length = 1221

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 378 tgcaggaacaaatggtccca 397
           ||||||||||||||||||||
Sbjct: 26  tgcaggaacaaatggtccca 7
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>gb|AC012380.1|AC012380 Genomic Sequence For Homo sapiens Clone 125H5, Chromosome 20, complete
             sequence
          Length = 108623

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   accatgtctgcctccatctt 556
             ||||||||||||||||||||
Sbjct: 40004 accatgtctgcctccatctt 39985


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,485,947
Number of Sequences: 3902068
Number of extensions: 5485947
Number of successful extensions: 89189
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89092
Number of HSP's gapped (non-prelim): 93
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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