ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5l02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
2dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
4emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 103 5e-19
5ref|XM_470902.1| Oryza sativa (japonica cultivar-group), mRNA 94 4e-16
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 4e-16
7gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 94 4e-16
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
9dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
10emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 44 0.36
11gb|AC041040.6| Homo sapiens chromosome 8, clone RP11-513O13, com... 42 1.4
12gb|AC157575.1| Mus musculus BAC clone RP23-16D16 from 9, complet... 42 1.4
13gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 5.6
14gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 5.6
15gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 5.6
16gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, comple... 40 5.6
17gb|CP000001.1| Bacillus cereus E33L, complete genome 40 5.6
18gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete s... 40 5.6
19emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.6
20emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 5.6
21emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.6
22emb|BX649391.13| Zebrafish DNA sequence from clone DKEY-1K23 in ... 40 5.6
23gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete seq... 40 5.6
24gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete se... 40 5.6
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
26gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, comple... 40 5.6
27dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
28dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
29dbj|AK111021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
30gb|AY109961.1| Zea mays CL7280_1 mRNA sequence 40 5.6
31gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 5.6
32dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
33dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.6
34dbj|AP006104.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
35dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
36dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
37emb|AL672076.10| Mouse DNA sequence from clone RP23-161N17 on ch... 40 5.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 5e-19
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                            
Query: 288      ggtccacgttggagtggagtactcgnagcggctgtgggtgatgcggtggaactnctggat 347
                |||||| || || |||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 13930297 ggtccatgtcggcgtggagtactcgtagcggctgtgcgtgatgcggtggaactcctggat 13930356

                                                                            
Query: 348      gtncttgntcttggngatgncgtccgtgtcgcggaggtcgacggagaggatgtctccgta 407
                || | || ||||||  ||| |    ||||| || |||| |||||||| ||||||||||||
Sbjct: 13930357 gtccctgttcttggccatgtccgtggtgtcacgcaggttgacggagaagatgtctccgta 13930416

                         
Query: 408      gggnctgac 416
                ||| |||||
Sbjct: 13930417 gggcctgac 13930425



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 137      agcagcatctctttgggatggtgaggtggccggccatgtgccacccctct 186
                ||||||| | |||| ||||||||||||| |||| ||||||||| ||||||
Sbjct: 13930140 agcagcaccgcttttggatggtgaggtgtccggtcatgtgccaaccctct 13930189
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>dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F10, full
            insert sequence
          Length = 2745

 Score =  103 bits (52), Expect = 5e-19
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  ggtccacgttggagtggagtactcgnagcggctgtgggtgatgcggtggaactnctggat 347
            |||||| || || |||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 2243 ggtccatgtcggcgtggagtactcgtagcggctgtgcgtgatgcggtggaactcctggat 2184

                                                                        
Query: 348  gtncttgntcttggngatgncgtccgtgtcgcggaggtcgacggagaggatgtctccgta 407
            || | || ||||||  ||| |    ||||| || |||| |||||||| ||||||||||||
Sbjct: 2183 gtccctgttcttggccatgtccgtggtgtcacgcaggttgacggagaagatgtctccgta 2124

                     
Query: 408  gggnctgac 416
            ||| |||||
Sbjct: 2123 gggcctgac 2115



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 137  agcagcatctctttgggatggtgaggtggccggccatgtgccacccctct 186
            ||||||| | |||| ||||||||||||| |||| ||||||||| ||||||
Sbjct: 2400 agcagcaccgcttttggatggtgaggtgtccggtcatgtgccaaccctct 2351
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 5e-19
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                            
Query: 288      ggtccacgttggagtggagtactcgnagcggctgtgggtgatgcggtggaactnctggat 347
                |||||| || || |||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 13884577 ggtccatgtcggcgtggagtactcgtagcggctgtgcgtgatgcggtggaactcctggat 13884636

                                                                            
Query: 348      gtncttgntcttggngatgncgtccgtgtcgcggaggtcgacggagaggatgtctccgta 407
                || | || ||||||  ||| |    ||||| || |||| |||||||| ||||||||||||
Sbjct: 13884637 gtccctgttcttggccatgtccgtggtgtcacgcaggttgacggagaagatgtctccgta 13884696

                         
Query: 408      gggnctgac 416
                ||| |||||
Sbjct: 13884697 gggcctgac 13884705



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 137      agcagcatctctttgggatggtgaggtggccggccatgtgccacccctct 186
                ||||||| | |||| ||||||||||||| |||| ||||||||| ||||||
Sbjct: 13884420 agcagcaccgcttttggatggtgaggtgtccggtcatgtgccaaccctct 13884469
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>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144552

 Score =  103 bits (52), Expect = 5e-19
 Identities = 108/129 (83%)
 Strand = Plus / Plus

                                                                         
Query: 288   ggtccacgttggagtggagtactcgnagcggctgtgggtgatgcggtggaactnctggat 347
             |||||| || || |||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 66925 ggtccatgtcggcgtggagtactcgtagcggctgtgcgtgatgcggtggaactcctggat 66984

                                                                         
Query: 348   gtncttgntcttggngatgncgtccgtgtcgcggaggtcgacggagaggatgtctccgta 407
             || | || ||||||  ||| |    ||||| || |||| |||||||| ||||||||||||
Sbjct: 66985 gtccctgttcttggccatgtccgtggtgtcacgcaggttgacggagaagatgtctccgta 67044

                      
Query: 408   gggnctgac 416
             ||| |||||
Sbjct: 67045 gggcctgac 67053



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 137   agcagcatctctttgggatggtgaggtggccggccatgtgccacccctct 186
             ||||||| | |||| ||||||||||||| |||| ||||||||| ||||||
Sbjct: 66768 agcagcaccgcttttggatggtgaggtgtccggtcatgtgccaaccctct 66817
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>ref|XM_470902.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2235

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 254  tccactgctcgttggggtcgtcggtggcgaacttggtccacgttggagtggagtactcgn 313
            |||||||| ||||||||||||||||||||||| |||||||||  || ||||||| |||| 
Sbjct: 2113 tccactgcgcgttggggtcgtcggtggcgaacgtggtccacgccggcgtggagttctcgt 2054

                                      
Query: 314  agcggctgtgggtgatgcggtggaac 339
            |||||||||| || | ||||||||||
Sbjct: 2053 agcggctgtgcgtcacgcggtggaac 2028



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 135  ctagcagcatctctttgggatggtgaggtggccggccatgtgcca 179
            ||||||||||||||| |||| |  ||||||||||| |||||||||
Sbjct: 2235 ctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 2191
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 254      tccactgctcgttggggtcgtcggtggcgaacttggtccacgttggagtggagtactcgn 313
                |||||||| ||||||||||||||||||||||| |||||||||  || ||||||| |||| 
Sbjct: 16265767 tccactgcgcgttggggtcgtcggtggcgaacgtggtccacgccggcgtggagttctcgt 16265708

                                          
Query: 314      agcggctgtgggtgatgcggtggaac 339
                |||||||||| || | ||||||||||
Sbjct: 16265707 agcggctgtgcgtcacgcggtggaac 16265682



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 133      agctagcagcatctctttgggatggtgaggtggccggccatgtgcca 179
                ||||||||||||||||| |||| |  ||||||||||| |||||||||
Sbjct: 16265891 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 16265845
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>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 254   tccactgctcgttggggtcgtcggtggcgaacttggtccacgttggagtggagtactcgn 313
             |||||||| ||||||||||||||||||||||| |||||||||  || ||||||| |||| 
Sbjct: 63783 tccactgcgcgttggggtcgtcggtggcgaacgtggtccacgccggcgtggagttctcgt 63724

                                       
Query: 314   agcggctgtgggtgatgcggtggaac 339
             |||||||||| || | ||||||||||
Sbjct: 63723 agcggctgtgcgtcacgcggtggaac 63698



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 133   agctagcagcatctctttgggatggtgaggtggccggccatgtgcca 179
             ||||||||||||||||| |||| |  ||||||||||| |||||||||
Sbjct: 63907 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 63861
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 254      tccactgctcgttggggtcgtcggtggcgaacttggtccacgttggagtggagtactcgn 313
                |||||||| ||||||||||||||||||||||| |||||||||  || ||||||| |||| 
Sbjct: 16259400 tccactgcgcgttggggtcgtcggtggcgaacgtggtccacgccggcgtggagttctcgt 16259341

                                          
Query: 314      agcggctgtgggtgatgcggtggaac 339
                |||||||||| || | ||||||||||
Sbjct: 16259340 agcggctgtgcgtcacgcggtggaac 16259315



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 133      agctagcagcatctctttgggatggtgaggtggccggccatgtgcca 179
                ||||||||||||||||| |||| |  ||||||||||| |||||||||
Sbjct: 16259524 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 16259478
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>dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E06, full
            insert sequence
          Length = 2363

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 254  tccactgctcgttggggtcgtcggtggcgaacttggtccacgttggagtggagtactcgn 313
            |||||||| ||||||||||||||||||||||| |||||||||  || ||||||| |||| 
Sbjct: 2178 tccactgcgcgttggggtcgtcggtggcgaacgtggtccacgccggcgtggagttctcgt 2119

                                      
Query: 314  agcggctgtgggtgatgcggtggaac 339
            |||||||||| || | ||||||||||
Sbjct: 2118 agcggctgtgcgtcacgcggtggaac 2093



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 133  agctagcagcatctctttgggatggtgaggtggccggccatgtgcca 179
            |||||||||||||||||||||| |  ||||||||||| |||||||||
Sbjct: 2302 agctagcagcatctctttgggaggaggaggtggccggtcatgtgcca 2256
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 221     ggaaggtggcgctgcccttggc 242
               ||||||||||||||||||||||
Sbjct: 3254471 ggaaggtggcgctgcccttggc 3254492
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>gb|AC041040.6| Homo sapiens chromosome 8, clone RP11-513O13, complete sequence
          Length = 155301

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 172    atgtgccacccctctcctccg 192
              |||||||||||||||||||||
Sbjct: 134759 atgtgccacccctctcctccg 134739
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>gb|AC157575.1| Mus musculus BAC clone RP23-16D16 from 9, complete sequence
          Length = 196682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     cccttttatatttattggatt 25
             |||||||||||||||||||||
Sbjct: 45387 cccttttatatttattggatt 45407
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 216     cggccggaaggtggcgctgc 235
               ||||||||||||||||||||
Sbjct: 2307213 cggccggaaggtggcgctgc 2307194
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      cataaaaacgcactttattc 87
               ||||||||||||||||||||
Sbjct: 1397890 cataaaaacgcactttattc 1397909
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      cataaaaacgcactttattc 87
               ||||||||||||||||||||
Sbjct: 1397836 cataaaaacgcactttattc 1397855
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>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence
          Length = 159698

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   atggaaaatttggaggaaag 134
             ||||||||||||||||||||
Sbjct: 36446 atggaaaatttggaggaaag 36427
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      cataaaaacgcactttattc 87
               ||||||||||||||||||||
Sbjct: 1433016 cataaaaacgcactttattc 1433035
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>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence
          Length = 122819

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   gaattatggaatggaaaatt 124
             ||||||||||||||||||||
Sbjct: 79554 gaattatggaatggaaaatt 79535
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   gttggggtcgtcggtggcga 283
             ||||||||||||||||||||
Sbjct: 24458 gttggggtcgtcggtggcga 24439
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    gttggggtcgtcggtggcga 283
              ||||||||||||||||||||
Sbjct: 289432 gttggggtcgtcggtggcga 289413
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gttggggtcgtcggtggcga 283
             ||||||||||||||||||||
Sbjct: 36413 gttggggtcgtcggtggcga 36432
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>emb|BX649391.13| Zebrafish DNA sequence from clone DKEY-1K23 in linkage group 5,
             complete sequence
          Length = 133337

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ggctgtgggtgatgcggtgg 336
             ||||||||||||||||||||
Sbjct: 65991 ggctgtgggtgatgcggtgg 65972
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>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   gaattatggaatggaaaatt 124
             ||||||||||||||||||||
Sbjct: 97538 gaattatggaatggaaaatt 97519
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>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence
          Length = 151594

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gaattatggaatggaaaatt 124
             ||||||||||||||||||||
Sbjct: 72041 gaattatggaatggaaaatt 72060
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 157      gtgaggtggccggccatgtg 176
                ||||||||||||||||||||
Sbjct: 21111051 gtgaggtggccggccatgtg 21111032
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>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence
          Length = 163994

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     tttattggattattgcatct 34
              ||||||||||||||||||||
Sbjct: 129985 tttattggattattgcatct 130004
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>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144D11
          Length = 157943

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gtgaggtggccggccatgtg 176
             ||||||||||||||||||||
Sbjct: 78596 gtgaggtggccggccatgtg 78577
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>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1064G04
          Length = 186704

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  gtgaggtggccggccatgtg 176
            ||||||||||||||||||||
Sbjct: 8560 gtgaggtggccggccatgtg 8541
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>dbj|AK111021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-G10, full
           insert sequence
          Length = 975

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gtgaggtggccggccatgtg 176
           ||||||||||||||||||||
Sbjct: 791 gtgaggtggccggccatgtg 810
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>gb|AY109961.1| Zea mays CL7280_1 mRNA sequence
          Length = 912

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 tgcccttggcggcgagcatg 252
           ||||||||||||||||||||
Sbjct: 316 tgcccttggcggcgagcatg 297
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      cataaaaacgcactttattc 87
               ||||||||||||||||||||
Sbjct: 1397767 cataaaaacgcactttattc 1397786
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>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
             complete sequence
          Length = 76227

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttttatatttattggattat 27
             ||||||||||||||||||||
Sbjct: 35176 ttttatatttattggattat 35195
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>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b,
             complete sequence
          Length = 93261

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttttatatttattggattat 27
             ||||||||||||||||||||
Sbjct: 27999 ttttatatttattggattat 28018
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>dbj|AP006104.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10H09, TM0189,
             complete sequence
          Length = 92745

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ttttatatttattggattat 27
             ||||||||||||||||||||
Sbjct: 82555 ttttatatttattggattat 82536
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>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181,
              complete sequence
          Length = 185320

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ttttatatttattggattat 27
              ||||||||||||||||||||
Sbjct: 146464 ttttatatttattggattat 146445
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>dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a,
           complete sequence
          Length = 33254

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ttttatatttattggattat 27
           ||||||||||||||||||||
Sbjct: 908 ttttatatttattggattat 889
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>emb|AL672076.10| Mouse DNA sequence from clone RP23-161N17 on chromosome 4, complete
             sequence
          Length = 208396

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ggccatgtgccacccctctc 187
             ||||||||||||||||||||
Sbjct: 93830 ggccatgtgccacccctctc 93849


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,196,013
Number of Sequences: 3902068
Number of extensions: 3196013
Number of successful extensions: 57683
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57381
Number of HSP's gapped (non-prelim): 298
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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