>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box|
           domain protein 14)
          Length = 632

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 45/96 (46%), Positives = 67/96 (69%)
 Frame = -1

Query: 606 EALTILSVXVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLAC 427
           EAL IL++  ++ E KTAIA+A +IP L++++R+   RN+ENAAAIL  LC  + + L  
Sbjct: 529 EALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNV 588

Query: 426 IGRLGAQIPLTELSKTGSDRAKRKATSLLEHLSKLQ 319
              +GA + L EL++ G+DRAKRKA SLLE + + +
Sbjct: 589 AREVGADVALKELTENGTDRAKRKAASLLELIQQTE 624



 Score = 39.7 bits (91), Expect = 0.007
 Identities = 26/77 (33%), Positives = 41/77 (53%)
 Frame = -1

Query: 561 KTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSK 382
           K AI  A  I  ++++L++     +ENAAA L +L   D +N   IG  GA   L  L +
Sbjct: 421 KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVID-ENKVAIGAAGAIQALISLLE 479

Query: 381 TGSDRAKRKATSLLEHL 331
            G+ R K+ A + + +L
Sbjct: 480 EGTRRGKKDAATAIFNL 496

>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell|
           death-related protein SPL11)
          Length = 694

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
 Frame = -1

Query: 606 EALTILSVXVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQ--NL 433
           EA+ ILS+  SH E K AI  A  +P L++++ S   RN+ENAAA++L LC  +    +L
Sbjct: 551 EAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHL 610

Query: 432 ACIGRLGAQIPLTELSKTGSDRAKRKATSLLEHLSKLQV 316
           A     G  +PL EL+  G+DR KRKA  LLE +S+  V
Sbjct: 611 ARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLV 649



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 29/91 (31%), Positives = 46/91 (50%)
 Frame = -1

Query: 603 ALTILSVXVSHHECKTAIAKAHTIPFLIDLLRSSQARNKENAAAILLALCKKDAQNLACI 424
           A+T L     H + K +I  +  +P ++ +L++     +ENAAA L +L   D   +  I
Sbjct: 429 AVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVT-I 487

Query: 423 GRLGAQIPLTELSKTGSDRAKRKATSLLEHL 331
           G +GA   L  L   GS R K+ A + L +L
Sbjct: 488 GGMGAIPALVVLLGEGSQRGKKDAAAALFNL 518



 Score = 33.1 bits (74), Expect = 0.64
 Identities = 23/69 (33%), Positives = 32/69 (46%)
 Frame = -1

Query: 534 IPFLIDLLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRK 355
           I  L+  L S     + +AAA L  L K++A N  CI   GA   L  L  +   R +  
Sbjct: 369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEH 428

Query: 354 ATSLLEHLS 328
           A + L +LS
Sbjct: 429 AVTALLNLS 437

>CHEB2_METMA (Q8PX96) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 2 operon (EC 3.1.1.61)
          Length = 367

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -1

Query: 516 LLRSSQARNKENAAAILLALCKKDAQNLACIGRLGAQIPLTELSKTGSDRAKRKATSLL 340
           +L  S     E   A + A+ K D  NL CI  L  QIP     K  S R K    ++L
Sbjct: 121 ILSQSMHEMAEEICAKVRAVSKADLNNLGCIRDLEHQIPENHRKKKNSLREKTSVRNVL 179

>TIG_MYCTU (O53189) Trigger factor (TF)|
          Length = 466

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 439 ESRLHREAGCSNTINGAVQDRLGQSQAQGDLSP 341
           E+R+ REA     +N A+  R GQ+ A+ D+ P
Sbjct: 55  EARIGREAMLDQIVNDALPSRYGQAVAESDVQP 87

>TIG_MYCBO (Q7TYJ1) Trigger factor (TF)|
          Length = 466

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 439 ESRLHREAGCSNTINGAVQDRLGQSQAQGDLSP 341
           E+R+ REA     +N A+  R GQ+ A+ D+ P
Sbjct: 55  EARIGREAMLDQIVNDALPSRYGQAVAESDVQP 87

>POL1_BRSV (P18522) RNA1 polyprotein (P1) [Contains: P1A protein (1A) (Protease|
            cofactor); Putative ATP-dependent helicase (EC 3.6.1.-)
            (NTP-binding protein) (NTB) (1B) (Membrane-binding
            protein); Viral genome-linked protein (1C-VPg); Picornain
            3C-like pr
          Length = 2264

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
 Frame = -2

Query: 329  VSCRCSKSACPPHTIFHVCVCYTYEKL*THLLL------RVKVVGW 210
            VS  C  + CP HT     VC TYEK   H  L       VKV  W
Sbjct: 2217 VSLACDSTMCPHHT----AVCETYEKAFRHCWLAKCKTSAVKVSPW 2258

>IL17B_HUMAN (Q9UHF5) Interleukin-17B precursor (IL-17B) (Cytokine-like protein|
           Zcyto7) (Neuronal interleukin-17-related factor)
           (Interleukin-20) (IL-20)
          Length = 180

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 395 RSCPRPARTEPSARRPLSWSISVSCRC 315
           R CP P RT P  +R +  +I+V C C
Sbjct: 152 RLCPPPPRTGPCRQRAVMETIAVGCTC 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,119,646
Number of Sequences: 219361
Number of extensions: 1797170
Number of successful extensions: 4055
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4050
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)