>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 509    aaagaagagcattgggaggt 528
              ||||||||||||||||||||
Sbjct: 297969 aaagaagagcattgggaggt 297988

>gb|AC103580.4| Trypanosoma brucei chromosome 4 clone RPCI93-5E12, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   aaagaagagcattgggaggt 528
             ||||||||||||||||||||
Sbjct: 33926 aaagaagagcattgggaggt 33907

>gb|AC105256.7| Mus musculus BAC clone RP23-413O13 from chromosome 8, complete sequence
          Length = 210086

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tgcaaatacaaggtttacaa 43
              ||||||||||||||||||||
Sbjct: 112019 tgcaaatacaaggtttacaa 112000

>gb|AY150217.1| Ambystoma tigrinum stebbensi virus, complete genome
          Length = 106332

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aatggaagcggccttctcta 88
             ||||||||||||||||||||
Sbjct: 46458 aatggaagcggccttctcta 46477

>gb|AY166971.1|AY166970S02 Homo sapiens carbamoylphosphate synthetase (CPSI) gene, exon 2;
           nuclear gene for mitochondrial product
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 catgcaacgtgtttcttcag 440
           ||||||||||||||||||||
Sbjct: 95  catgcaacgtgtttcttcag 114

>emb|BX294100.11| Zebrafish DNA sequence from clone DKEYP-2G11 in linkage group 12,
             complete sequence
          Length = 173405

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tacacagccacttgccacac 278
             ||||||||||||||||||||
Sbjct: 49748 tacacagccacttgccacac 49767

>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3,
             complete sequence
          Length = 240105

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   ttgttgttgaatgactgtgaatac 322
             |||||||||||||| |||||||||
Sbjct: 63443 ttgttgttgaatgattgtgaatac 63420

>gb|AC104982.7| Homo sapiens chromosome 17, clone RP11-338L22, complete sequence
          Length = 164107

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   tgtttcttcagtgcctggag 449
             ||||||||||||||||||||
Sbjct: 32880 tgtttcttcagtgcctggag 32861

>emb|BX511164.11| Zebrafish DNA sequence from clone DKEY-63J1 in linkage group 19, complete
              sequence
          Length = 214001

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    atgcaacgtgtttcttcagt 441
              ||||||||||||||||||||
Sbjct: 141793 atgcaacgtgtttcttcagt 141812



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    atgcaacgtgtttcttcagt 441
              ||||||||||||||||||||
Sbjct: 138008 atgcaacgtgtttcttcagt 138027

>gb|AC153820.4| Mus musculus 6 BAC RP23-459L15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180996

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 248    atcacaggacctacacagccactt 271
              ||||||||||||||| ||||||||
Sbjct: 130405 atcacaggacctacaaagccactt 130382

>gb|AC157213.2| Mus musculus BAC clone RP23-157N5 from chromosome 12, complete sequence
          Length = 211304

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    aggaagttgatgtgggagca 569
              ||||||||||||||||||||
Sbjct: 119653 aggaagttgatgtgggagca 119672

>emb|BX005142.4| Zebrafish DNA sequence from clone CH211-129K16 in linkage group 3,
              complete sequence
          Length = 170200

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    ttgttgttgaatgactgtgaatac 322
              |||||||||||||| |||||||||
Sbjct: 148013 ttgttgttgaatgattgtgaatac 147990

>gb|AC024913.33| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence
          Length = 197831

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   atcacaggacctacacagccactt 271
             ||||||||||||||| ||||||||
Sbjct: 12123 atcacaggacctacaaagccactt 12146


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,474,803
Number of Sequences: 3902068
Number of extensions: 4474803
Number of successful extensions: 76962
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76923
Number of HSP's gapped (non-prelim): 39
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)