ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
2gb|AY862320.1| Zea mays minichromosome maintenance protein (MCM6... 246 6e-62
3gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
4gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
6gb|AY104405.1| Zea mays PCO131134 mRNA sequence 174 2e-40
7dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 46 0.12
8gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosom... 42 1.8
9gb|AC137827.20| Medicago truncatula clone mth2-20g23, complete s... 42 1.8
10gb|AC112917.3| Homo sapiens X BAC RP11-46C18 (Roswell Park Cance... 42 1.8
11gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, comple... 42 1.8
12gb|AC005217.1| Homo sapiens chromosome 5, P1 clone 1047D6 (LBNL ... 40 7.2
13gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 7.2
14gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, co... 40 7.2
15gb|AC102257.5| Mus musculus chromosome 18, clone RP24-196N23, co... 40 7.2
16gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, com... 40 7.2
17gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987... 40 7.2
18gb|AC127278.4| Mus musculus BAC clone RP24-224D24 from chromosom... 40 7.2
19gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosom... 40 7.2
20emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chro... 40 7.2
21emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on ch... 40 7.2
22emb|AL137078.20| Human DNA sequence from clone RP1-66N13 on chro... 40 7.2
23gb|AC144913.13| Mus musculus chromosome 15, clone RP24-203A19, c... 40 7.2
24gb|AC161172.4| Mus musculus chromosome 15, clone RP24-265I13, co... 40 7.2
25emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chr... 40 7.2
26emb|AJ579533.1|MTA579533 Milnesium tardigradum partial hsp70 pro... 40 7.2
27gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosom... 40 7.2
28gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, comp... 40 7.2
29gb|AC010602.7| Homo sapiens chromosome 5 clone CTB-122H10, compl... 40 7.2
30gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 7.2
31gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, comp... 40 7.2
32gb|AC154403.2| Mus musculus BAC clone RP24-239F20 from chromosom... 40 7.2
33gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromo... 40 7.2
34gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, comp... 40 7.2
35gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, comp... 40 7.2
36gb|AC069476.25| Homo sapiens chromosome 11 clone b430h11 map 11,... 40 7.2
37gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, compl... 40 7.2
38gb|AC069148.6| Homo sapiens BAC clone RP11-107N15 from 2, comple... 40 7.2
39ref|XM_343841.2| PREDICTED: Rattus norvegicus similar to Plexin ... 40 7.2
40emb|AL954831.17| Zebrafish DNA sequence from clone DKEY-12H9 in ... 40 7.2
41dbj|AP003174.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.2
42emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on ch... 40 7.2
43emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chr... 40 7.2
44emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on ch... 40 7.2 
>dbj|AK102937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J19, full
            insert sequence
          Length = 2977

 Score =  248 bits (125), Expect = 2e-62
 Identities = 179/197 (90%)
 Strand = Plus / Minus

                                                                        
Query: 335  agatgaccttccctctgtatcagcctctctataatggccttgatgcacttaacttcttcc 394
            ||||| || ||||||||||| | ||||||||| ||||||||||||||||| |||||||||
Sbjct: 2495 agatggccatccctctgtattaacctctctatgatggccttgatgcacttcacttcttcc 2436

                                                                        
Query: 395  ttcacctcttctgtagaactatatgcaccttgggcattctgctgctcaacataccaaatg 454
            ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 2435 ttcacctctgctgtagaactataggctccttgggcattctgctgctcaacataccaaatt 2376

                                                                        
Query: 455  atcagatccccttgcttcatgccagccagaccatccccgtctttcttgactgattcttca 514
            ||||||||||||||||||||||||||||||||||| || |||||| |||| || ||||||
Sbjct: 2375 atcagatccccttgcttcatgccagccagaccatctccatctttcgtgacagactcttca 2316

                             
Query: 515  tgttgcctcagtctcat 531
            || ||||  ||||||||
Sbjct: 2315 tgctgccgtagtctcat 2299



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 240  aatcgataacatagtttgggttaaccgccaggattctg 277
            ||||||| |||||||| || ||||| ||||||||||||
Sbjct: 2599 aatcgatgacatagttcggattaactgccaggattctg 2562
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>gb|AY862320.1| Zea mays minichromosome maintenance protein (MCM6) mRNA, complete cds
          Length = 2785

 Score =  246 bits (124), Expect = 6e-62
 Identities = 199/224 (88%)
 Strand = Plus / Minus

                                                                        
Query: 308  gctgctgttccttcatctatgaccacaagatgaccttccctctgtatcagcctctctata 367
            ||||| || ||||| || ||||| | |||||| ||||||| |||||| || |||||||||
Sbjct: 2480 gctgcagtaccttcgtcaatgactataagatggccttcccgctgtataagtctctctata 2421

                                                                        
Query: 368  atggccttgatgcacttaacttcttccttcacctcttctgtagaactatatgcaccttgg 427
            ||||||||||| ||||| |||||||||||||||||| | |||||||||||||| |||| |
Sbjct: 2420 atggccttgatacacttcacttcttccttcacctctgcagtagaactatatgcccctttg 2361

                                                                        
Query: 428  gcattctgctgctcaacataccaaatgatcagatccccttgcttcatgccagccagacca 487
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||
Sbjct: 2360 gcattctgctgctcaacataccagatgataagatccccttgcttcatgccagctaaacca 2301

                                                        
Query: 488  tccccgtctttcttgactgattcttcatgttgcctcagtctcat 531
            || || |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 2300 tctccatctttcttgactgactcttcatgctgccttagtctcat 2257



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 240  aatcgataacatagtttgggttaaccgccaggattct 276
            |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 2560 aatcaataacatagttcgggttaactgccagtattct 2524
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24,
              complete sequence
          Length = 146492

 Score =  208 bits (105), Expect = 1e-50
 Identities = 123/129 (95%)
 Strand = Plus / Minus

                                                                          
Query: 361    ctctataatggccttgatgcacttaacttcttccttcacctcttctgtagaactatatgc 420
              |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 140528 ctctatgatggccttgatgcacttcacttcttccttcacctctgctgtagaactataggc 140469

                                                                          
Query: 421    accttgggcattctgctgctcaacataccaaatgatcagatccccttgcttcatgccagc 480
               |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 140468 tccttgggcattctgctgctcaacataccaaattatcagatccccttgcttcatgccagc 140409

                       
Query: 481    cagaccatc 489
              |||||||||
Sbjct: 140408 cagaccatc 140400



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 240    aatcgataacatagtttgggttaaccgccaggattctg 277
              ||||||| |||||||| || ||||| ||||||||||||
Sbjct: 140877 aatcgatgacatagttcggattaactgccaggattctg 140840
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>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1384_A02, complete sequence
          Length = 100251

 Score =  208 bits (105), Expect = 1e-50
 Identities = 123/129 (95%)
 Strand = Plus / Minus

                                                                         
Query: 361   ctctataatggccttgatgcacttaacttcttccttcacctcttctgtagaactatatgc 420
             |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 14795 ctctatgatggccttgatgcacttcacttcttccttcacctctgctgtagaactataggc 14736

                                                                         
Query: 421   accttgggcattctgctgctcaacataccaaatgatcagatccccttgcttcatgccagc 480
              |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 14735 tccttgggcattctgctgctcaacataccaaattatcagatccccttgcttcatgccagc 14676

                      
Query: 481   cagaccatc 489
             |||||||||
Sbjct: 14675 cagaccatc 14667



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 240   aatcgataacatagtttgggttaaccgccaggattctg 277
             ||||||| |||||||| || ||||| ||||||||||||
Sbjct: 15144 aatcgatgacatagttcggattaactgccaggattctg 15107
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  208 bits (105), Expect = 1e-50
 Identities = 123/129 (95%)
 Strand = Plus / Minus

                                                                           
Query: 361     ctctataatggccttgatgcacttaacttcttccttcacctcttctgtagaactatatgc 420
               |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct: 8218307 ctctatgatggccttgatgcacttcacttcttccttcacctctgctgtagaactataggc 8218248

                                                                           
Query: 421     accttgggcattctgctgctcaacataccaaatgatcagatccccttgcttcatgccagc 480
                |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8218247 tccttgggcattctgctgctcaacataccaaattatcagatccccttgcttcatgccagc 8218188

                        
Query: 481     cagaccatc 489
               |||||||||
Sbjct: 8218187 cagaccatc 8218179



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 240     aatcgataacatagtttgggttaaccgccaggattctg 277
               ||||||| |||||||| || ||||| ||||||||||||
Sbjct: 8218656 aatcgatgacatagttcggattaactgccaggattctg 8218619
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>gb|AY104405.1| Zea mays PCO131134 mRNA sequence
          Length = 1414

 Score =  174 bits (88), Expect = 2e-40
 Identities = 112/120 (93%)
 Strand = Plus / Minus

                                                                       
Query: 361 ctctataatggccttgatgcacttaacttcttccttcacctcttctgtagaactatatgc 420
           |||||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 131 ctctataatggccttgatacacttcacttcttccttcacctctgcagtagaactatatgc 72

                                                                       
Query: 421 accttgggcattctgctgctcaacataccaaatgatcagatccccttgcttcatgccagc 480
            |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 71  ccctttggcattctgctgctcaacataccagatgataagatccccttgcttcatgccagc 12



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 240 aatcgataacatagtttgggttaaccgccaggattct 276
           |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 368 aatcaataacatagttcgggttaactgccagtattct 332
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 474     tgccagccagaccatccccgtct 496
               |||||||||||||||||||||||
Sbjct: 3228798 tgccagccagaccatccccgtct 3228820
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>gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosome 10, complete
             sequence
          Length = 154482

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 393   ccttcacctcttctgtagaac 413
             |||||||||||||||||||||
Sbjct: 43839 ccttcacctcttctgtagaac 43859
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>gb|AC137827.20| Medicago truncatula clone mth2-20g23, complete sequence
          Length = 105959

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 373   cttgatgcacttaacttcttc 393
             |||||||||||||||||||||
Sbjct: 36648 cttgatgcacttaacttcttc 36668
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>gb|AC112917.3| Homo sapiens X BAC RP11-46C18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 134089

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 495    ctttcttgactgattcttcat 515
              |||||||||||||||||||||
Sbjct: 109869 ctttcttgactgattcttcat 109889
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>gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, complete sequence
          Length = 201535

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   ggtggcaggtacaacatttct 139
             |||||||||||||||||||||
Sbjct: 66039 ggtggcaggtacaacatttct 66059
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>gb|AC005217.1| Homo sapiens chromosome 5, P1 clone 1047D6 (LBNL H20), complete
             sequence
          Length = 85641

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   cctctgtatcagcctctcta 365
             ||||||||||||||||||||
Sbjct: 78191 cctctgtatcagcctctcta 78210
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>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   caccttctgctgctgttcct 319
             ||||||||||||||||||||
Sbjct: 71591 caccttctgctgctgttcct 71572
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>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence
          Length = 211576

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    caccttctgctgctgttcct 319
              ||||||||||||||||||||
Sbjct: 136350 caccttctgctgctgttcct 136369
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>gb|AC102257.5| Mus musculus chromosome 18, clone RP24-196N23, complete sequence
          Length = 194837

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     cttggaaggaagatacaatt 88
              ||||||||||||||||||||
Sbjct: 164547 cttggaaggaagatacaatt 164566
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>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence
          Length = 204704

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   acttcttccttcacctcttc 405
             ||||||||||||||||||||
Sbjct: 12038 acttcttccttcacctcttc 12019
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>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence
          Length = 192730

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    acaacatttctagagcatag 148
              ||||||||||||||||||||
Sbjct: 158609 acaacatttctagagcatag 158628
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>gb|AC127278.4| Mus musculus BAC clone RP24-224D24 from chromosome 18, complete
            sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   cttggaaggaagatacaatt 88
            ||||||||||||||||||||
Sbjct: 1148 cttggaaggaagatacaatt 1167
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>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete sequence
          Length = 168423

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    acttcttccttcacctcttc 405
              ||||||||||||||||||||
Sbjct: 127344 acttcttccttcacctcttc 127363
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>emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chromosome 11p12-13 Contains
              part of the SLC1A2 gene for three variants of solute
              carrier family 1 (glial high affinity glutamate
              transporter) member 2 and part of the CD44 gene for CD44
              antigen (homing function and Indian blood group system)
              with five variants, complete sequence
          Length = 183682

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    acttaacttcttccttcacc 400
              ||||||||||||||||||||
Sbjct: 116031 acttaacttcttccttcacc 116012
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>emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on chromosome 9 Contains the
             5' end of the SHB gene for SHB (Src homology 2 domain
             containing) adaptor protein B and two CpG islands,
             complete sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cttccttgggaagggggtgg 123
             ||||||||||||||||||||
Sbjct: 36704 cttccttgggaagggggtgg 36685
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>emb|AL137078.20| Human DNA sequence from clone RP1-66N13 on chromosome 20 Contains a
             novel gene (LOC284749) and two novel genes, complete
             sequence
          Length = 80725

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 85    aattccagagatacatgtgcttccttgg 112
             ||||||||||| |||||| |||||||||
Sbjct: 33749 aattccagagagacatgttcttccttgg 33722
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>gb|AC144913.13| Mus musculus chromosome 15, clone RP24-203A19, complete sequence
          Length = 167647

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    cttcttccttcacctcttct 406
              ||||||||||||||||||||
Sbjct: 114954 cttcttccttcacctcttct 114973
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>gb|AC161172.4| Mus musculus chromosome 15, clone RP24-265I13, complete sequence
          Length = 181782

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    cttcttccttcacctcttct 406
              ||||||||||||||||||||
Sbjct: 106078 cttcttccttcacctcttct 106059
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>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete
              sequence
          Length = 145052

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    tgcttcatgccagccagacc 486
              ||||||||||||||||||||
Sbjct: 123521 tgcttcatgccagccagacc 123502
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>emb|AJ579533.1|MTA579533 Milnesium tardigradum partial hsp70 protein, isoform 3
          Length = 548

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 tgcaccttgggcattctgct 437
           ||||||||||||||||||||
Sbjct: 498 tgcaccttgggcattctgct 479
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>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete
             sequence
          Length = 204676

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tttgaatgtgtgctctattg 187
             ||||||||||||||||||||
Sbjct: 78619 tttgaatgtgtgctctattg 78638
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>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence
          Length = 214160

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   agttagctgtgtgtcctcag 229
             ||||||||||||||||||||
Sbjct: 86154 agttagctgtgtgtcctcag 86173
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>gb|AC010602.7| Homo sapiens chromosome 5 clone CTB-122H10, complete sequence
          Length = 145424

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    atgtgcttccttgggaaggg 118
             ||||||||||||||||||||
Sbjct: 17414 atgtgcttccttgggaaggg 17433
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     ttcttccttcacctcttctg 407
               ||||||||||||||||||||
Sbjct: 1106376 ttcttccttcacctcttctg 1106357
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>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence
          Length = 171343

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    agttagctgtgtgtcctcag 229
              ||||||||||||||||||||
Sbjct: 105690 agttagctgtgtgtcctcag 105671
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>gb|AC154403.2| Mus musculus BAC clone RP24-239F20 from chromosome 16, complete
             sequence
          Length = 131387

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   cttcttccttcacctcttct 406
             ||||||||||||||||||||
Sbjct: 62770 cttcttccttcacctcttct 62789
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>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
             sequence
          Length = 240827

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   cctctgtatcagcctctcta 365
             ||||||||||||||||||||
Sbjct: 71870 cctctgtatcagcctctcta 71889
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>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence
          Length = 183378

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   cctctgtatcagcctctcta 365
             ||||||||||||||||||||
Sbjct: 79697 cctctgtatcagcctctcta 79678
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>gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, complete sequence
          Length = 178405

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    cctctgtatcagcctctcta 365
              ||||||||||||||||||||
Sbjct: 142908 cctctgtatcagcctctcta 142889
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>gb|AC069476.25| Homo sapiens chromosome 11 clone b430h11 map 11, complete sequence
          Length = 184824

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   tatgatttccatttgaatgt 176
             ||||||||||||||||||||
Sbjct: 37091 tatgatttccatttgaatgt 37110
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>gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, complete sequence
          Length = 149842

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  acaacatttctagagcatag 148
            ||||||||||||||||||||
Sbjct: 7617 acaacatttctagagcatag 7636
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>gb|AC069148.6| Homo sapiens BAC clone RP11-107N15 from 2, complete sequence
          Length = 71173

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    agtactggtggcaaattaat 54
             ||||||||||||||||||||
Sbjct: 13671 agtactggtggcaaattaat 13652
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>ref|XM_343841.2| PREDICTED: Rattus norvegicus similar to Plexin B3 precursor (Plexin
           6) (LOC363517), mRNA
          Length = 5853

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 caccttctgctgctgttcct 319
           ||||||||||||||||||||
Sbjct: 58  caccttctgctgctgttcct 77
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>emb|AL954831.17| Zebrafish DNA sequence from clone DKEY-12H9 in linkage group 20, complete
              sequence
          Length = 230844

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 147    aggacagcagtatgatttccattt 170
              ||||||||||||| ||||||||||
Sbjct: 154439 aggacagcagtattatttccattt 154462
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>dbj|AP003174.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-136I14, complete
             sequence
          Length = 170156

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   tatgatttccatttgaatgt 176
             ||||||||||||||||||||
Sbjct: 91862 tatgatttccatttgaatgt 91881
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>emb|AL627098.30| Mouse DNA sequence from clone RP23-108K17 on chromosome 4, complete
              sequence
          Length = 208131

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    cttcttccttcacctcttct 406
              ||||||||||||||||||||
Sbjct: 161248 cttcttccttcacctcttct 161229
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>emb|CT025589.9| Mouse DNA sequence from clone RP24-149O16 on chromosome 16, complete
             sequence
          Length = 159420

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   cttcttccttcacctcttct 406
             ||||||||||||||||||||
Sbjct: 73704 cttcttccttcacctcttct 73723
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>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete
             sequence
          Length = 189860

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   gggaagggggtggcaggtac 130
             ||||||||||||||||||||
Sbjct: 43603 gggaagggggtggcaggtac 43622


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,019,316
Number of Sequences: 3902068
Number of extensions: 5019316
Number of successful extensions: 97257
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97112
Number of HSP's gapped (non-prelim): 145
length of query: 533
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 510
effective length of database: 17,143,297,704
effective search space: 8743081829040
effective search space used: 8743081829040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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