ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5k01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 890 0.0
2emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 850 0.0
3emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 670 0.0
4gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 513 e-142
5gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 513 e-142
6emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 507 e-140
7emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 492 e-136
8gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 492 e-136
9gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 454 e-124
10emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 392 e-106
11gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 272 1e-69
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 180 3e-42
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 86 1e-13
14gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com... 44 0.43
15gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, com... 44 0.43
16gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 44 0.43
17gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, co... 44 0.43
18emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, ... 44 0.43
19gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome... 42 1.7
20emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 42 1.7
21gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, comple... 42 1.7
22gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, comple... 42 1.7
23gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, comp... 40 6.7
24emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chr... 40 6.7
25emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on ch... 40 6.7
26emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for gluco... 40 6.7
27gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, compl... 40 6.7
28emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in ... 40 6.7
29gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, compl... 40 6.7
30gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, comple... 40 6.7
31gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, co... 40 6.7
32gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inne... 40 6.7
33gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferas... 40 6.7

>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  890 bits (449), Expect = 0.0
 Identities = 482/495 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 504

                                                                       
Query: 61  ggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcaca 120
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 503 ggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcaca 444

                                                                       
Query: 121 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 384

                                                                       
Query: 181 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtcc 324

                                                                       
Query: 241 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 323 atgttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttca 264

                                                                       
Query: 301 ccggattcagggataagattcagtttaggatagtcactagggcattttggaccacttatg 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatg 204

                                                                       
Query: 361 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagtg 144

                                                                       
Query: 421 ttgtancantttctagctaacgtgtccttgcancaactttntnccttcacctgaacctgc 480
           ||||| || ||||||||||||||||||||||| ||||||| | ||| |||||| ||||||
Sbjct: 143 ttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgc 84

                          
Query: 481 tccanaactaaaccc 495
           |||| ||||||||||
Sbjct: 83  tccagaactaaaccc 69



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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  850 bits (429), Expect = 0.0
 Identities = 477/495 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 60
           |||||||||||||| | |||| ||||||||||||||||||||  |||| |||||||||||
Sbjct: 570 gaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgat 511

                                                                       
Query: 61  ggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcaca 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 510 ggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcaca 451

                                                                       
Query: 121 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 450 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggca 391

                                                                       
Query: 181 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtcc 331

                                                                       
Query: 241 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 271

                                                                       
Query: 301 ccggattcagggataagattcagtttaggatagtcactagggcattttggaccacttatg 360
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccggattcagggagaagattaagtttaggatagtcactagggcattttggaccacttatg 211

                                                                       
Query: 361 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 151

                                                                       
Query: 421 ttgtancantttctagctaacgtgtccttgcancaactttntnccttcacctgaacctgc 480
           ||||| || ||||||||||||||||||||||| ||||||| | ||| |||||| ||||||
Sbjct: 150 ttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgc 91

                          
Query: 481 tccanaactaaaccc 495
           |||| ||||||||||
Sbjct: 90  tccagaactaaaccc 76



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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  670 bits (338), Expect = 0.0
 Identities = 377/390 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 60
           |||||||||||||| | |||| ||||||||||||||||||||  |||| |||||||||||
Sbjct: 390 gaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgat 331

                                                                       
Query: 61  ggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcaca 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 330 ggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcaca 271

                                                                       
Query: 121 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 180
           |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 270 agaaggcatgattaggattcaacagactgaatgactgcaccatcattacaaaaacgggca 211

                                                                       
Query: 181 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 210 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtcc 151

                                                                       
Query: 241 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 150 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttca 91

                                                                       
Query: 301 ccggattcagggataagattcagtttaggatagtcactagggcattttggaccacttatg 360
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 90  ccggattcagggagaagattaagtttaggatagtcactagggcattttggaccacttatg 31

                                         
Query: 361 attttacaacgacaagcacctgcgcagact 390
           ||||||||||||||||||||||||||||||
Sbjct: 30  attttacaacgacaagcacctgcgcagact 1



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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  513 bits (259), Expect = e-142
 Identities = 378/417 (90%), Gaps = 1/417 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 77
           |||||||||| |||||||||||||| ||||| || | | |||||||||||||||| || |
Sbjct: 570 aaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaagattgttga 512

                                                                       
Query: 78  agacaaaatgactatacgaccttggccatagaaatcatgcacaagaaggcatgattaggc 137
           | | |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 452

                                                                       
Query: 138 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 197
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 392

                                                                       
Query: 198 tcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacaga 257
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 391 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 332

                                                                       
Query: 258 attcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagggataag 317
           | ||| ||||||||| |||||||||| |||  ||| |||||||||||||||||||| |||
Sbjct: 331 agtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 272

                                                                       
Query: 318 attcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaagc 377
           |||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| ||||||
Sbjct: 271 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 212

                                                                    
Query: 378 acctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtancantttct 434
           |  |||||||||||| ||||||||||| ||||||||||| | |||||| || |||||
Sbjct: 211 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttct 155



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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  513 bits (259), Expect = e-142
 Identities = 378/417 (90%), Gaps = 1/417 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 77
           |||||||||| |||||||||||||| ||||| || | | |||||||||||||||| || |
Sbjct: 570 aaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaagattgttga 512

                                                                       
Query: 78  agacaaaatgactatacgaccttggccatagaaatcatgcacaagaaggcatgattaggc 137
           | | |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 452

                                                                       
Query: 138 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 197
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 392

                                                                       
Query: 198 tcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacaga 257
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 391 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 332

                                                                       
Query: 258 attcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagggataag 317
           | ||| ||||||||| |||||||||| |||  ||| |||||||||||||||||||| |||
Sbjct: 331 agtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 272

                                                                       
Query: 318 attcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaagc 377
           |||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| ||||||
Sbjct: 271 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 212

                                                                    
Query: 378 acctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtancantttct 434
           |  |||||||||||| ||||||||||| ||||||||||| | |||||| || |||||
Sbjct: 211 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttct 155



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>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  507 bits (256), Expect = e-140
 Identities = 425/479 (88%), Gaps = 3/479 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 77
           |||||||||| |||||||||||||| ||||| ||   | |||||||||||||||| || |
Sbjct: 497 aaatacataactaagatgatacatttgcttcgatgtgg-tgatggtatcaagattgttga 439

                                                                       
Query: 78  agacaaaatgactatacgaccttggccatagaaatcatgcacaagaaggcatgattaggc 137
           | | |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 438 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 379

                                                                       
Query: 138 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 197
           ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcaagagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 319

                                                                       
Query: 198 tcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacaga 257
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 318 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 259

                                                                       
Query: 258 attcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagggataag 317
           | ||||||||||||| |||||||||| |||  ||| |||||||||||||||||||| |||
Sbjct: 258 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 199

                                                                       
Query: 318 attcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaagc 377
           |||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| ||||||
Sbjct: 198 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 139

                                                                       
Query: 378 acctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtancantttctagc 437
           |  |||||||||||| ||||||||||| ||||||||||| | |||||| || |||||  |
Sbjct: 138 agttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcc 79

                                                                      
Query: 438 taacgtgtccttgcancaactttntnccttc-acctgaacctgctccanaactaaaccc 495
              ||||| |||||| ||||| | | ||||| || || |||||||||| ||||||||||
Sbjct: 78  cgtcgtgttcttgcagcaactct-tgccttctacttggacctgctccagaactaaaccc 21



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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  492 bits (248), Expect = e-136
 Identities = 369/408 (90%), Gaps = 1/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 77
           |||||||||| |||||||||||||| ||||| || | | |||||||||||||||| || |
Sbjct: 411 aaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaagattgttga 353

                                                                       
Query: 78  agacaaaatgactatacgaccttggccatagaaatcatgcacaagaaggcatgattaggc 137
           | | |||||||  | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 352 acagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 293

                                                                       
Query: 138 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 197
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagag 233

                                                                       
Query: 198 tcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacaga 257
           ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 232 tcccatgtcgaatttcatctcttggccacgggaaacattgtccaggttgtcacagacgga 173

                                                                       
Query: 258 attcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagggataag 317
           | ||||||||||||| |||||||||| |||  ||| |||||||||||||||||||| |||
Sbjct: 172 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 113

                                                                       
Query: 318 attcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaagc 377
           |||||| ||||||||||| ||||| ||  |||| || |||||||||||||||| ||||||
Sbjct: 112 attcagcttaggatagtccctaggacaggttgggccgcttatgattttacaaccacaagc 53

                                                           
Query: 378 acctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgta 425
           |  |||||||||||| ||||||||||| ||||||||||| | ||||||
Sbjct: 52  agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgta 5



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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  492 bits (248), Expect = e-136
 Identities = 345/378 (91%)
 Strand = Plus / Minus

                                                                       
Query: 57  tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 116
           |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473

                                                                       
Query: 117 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 176
           | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413

                                                                       
Query: 177 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 236
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353

                                                                       
Query: 237 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 296
           |||||||||||||||||| ||| ||| ||||||||| |||||||||| |||  ||| |||
Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293

                                                                       
Query: 297 ttcaccggattcagggataagattcagtttaggatagtcactagggcattttggaccact 356
           ||||||||||||||||| ||||||||| ||||||||||| ||||| ||| |||| || ||
Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233

                                                                       
Query: 357 tatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggca 416
           |||||||||||||| |||||||  |||||||||||| ||||||||||| |||||||||||
Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173

                             
Query: 417 agtgttgtancantttct 434
            | |||||| || |||||
Sbjct: 172 ggcgttgtagcagtttct 155



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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  454 bits (229), Expect = e-124
 Identities = 232/233 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 gaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgat 2204

                                                                        
Query: 61   ggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcaca 120
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2203 ggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcaca 2144

                                                                        
Query: 121  agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 agaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggca 2084

                                                                 
Query: 181  catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 233
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 catgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031



 Score =  323 bits (163), Expect = 3e-85
 Identities = 184/193 (95%)
 Strand = Plus / Minus

                                                                        
Query: 300  accggattcagggataagattcagtttaggatagtcactagggcattttggaccacttat 359
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717

                                                                        
Query: 360  gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657

                                                                        
Query: 420  gttgtancantttctagctaacgtgtccttgcancaactttntnccttcacctgaacctg 479
            |||||| || ||||||||||||||||||||||| ||||||| | ||| |||||| |||||
Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597

                         
Query: 480  ctccanaactaaa 492
            ||||| |||||||
Sbjct: 1596 ctccagaactaaa 1584



 Score =  131 bits (66), Expect = 2e-27
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                        
Query: 233  cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 292
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878

                      
Query: 293  ctggttcacc 302
            ||||||||||
Sbjct: 1877 ctggttcacc 1868



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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  392 bits (198), Expect = e-106
 Identities = 324/365 (88%), Gaps = 2/365 (0%)
 Strand = Plus / Minus

                                                                       
Query: 132 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 191
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 192 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 251
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                                                       
Query: 252 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 311
           ||| ||| ||||||||||||| |||||||||| |||  ||| ||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235

                                                                       
Query: 312 gataagattcagtttaggatagtcactagggcattttggaccacttatgattttacaacg 371
           || ||||||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| 
Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175

                                                                       
Query: 372 acaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtancantt 431
           |||||||  |||||||||||| ||||||||||| |||||| |||| | |||||| || ||
Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115

                                                                       
Query: 432 tctagctaacgtgtccttgcancaactttntnccttc-acctgaacctgctccanaacta 490
           |||  |   ||||| |||||| ||||| | | ||||| || || |||||||||| |||||
Sbjct: 114 tctgcccgtcgtgttcttgcagcaactct-tgccttctacttggacctgctccagaacta 56

                
Query: 491 aaccc 495
           |||||
Sbjct: 55  aaccc 51



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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  272 bits (137), Expect = 1e-69
 Identities = 167/177 (94%)
 Strand = Plus / Minus

                                                                        
Query: 57   tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 116
            |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171

                                                                        
Query: 117  cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 176
            | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111

                                                                     
Query: 177  ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 233
            |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score =  139 bits (70), Expect = 1e-29
 Identities = 166/197 (84%), Gaps = 2/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 300  accggattcagggataagattcagtttaggatagtcactagggcattttggaccacttat 359
            |||||||||||||| ||||||||| ||||||||||| ||||| ||  |||| || |||||
Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738

                                                                        
Query: 360  gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 419
            ||||||||||| |||||||  |||||||||||| ||||||||||| ||||||||||| | 
Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678

                                                                        
Query: 420  gttgtancantttctagctaacgtgtccttgcancaactttntnccttc-acctgaacct 478
            |||||| || |||||  |   ||||| |||||| ||||| | | ||||| || || ||||
Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactct-tgccttctacttggacct 1619

                             
Query: 479  gctccanaactaaaccc 495
            |||||| ||||||||||
Sbjct: 1618 gctccagaactaaaccc 1602



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 233  cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 292
            ||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||| ||||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904

                      
Query: 293  ctggttcacc 302
             |||||||||
Sbjct: 1903 ttggttcacc 1894



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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Minus

                                                                       
Query: 95  gaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatga 154
           ||||| ||||| |||||||||||||||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 155 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 214
           | ||||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 215 tctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatgg 274
           ||||||||||| | | ||||||||||||||||||||| || ||| || ||||||| ||||
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                                                                      
Query: 275 tgcagtactgagtgacatctggttcaccggattcagggataagattcagtttaggatag 333
           ||||||||| ||||||||| ||||||||||||||| | | ||||| |||||||| ||||
Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258



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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 93  acgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaat 152
           |||||| ||||||||||||| | |||| |||  ||||||||||||  | |||||  || |
Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490

                                                                       
Query: 153 gactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 212
           ||| ||||| |  |||||||||||| ||||||||||| |||||| |  ||||||||  ||
Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430

                          
Query: 213 catctcttggccacg 227
           |||||||||||||||
Sbjct: 429 catctcttggccacg 415



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 241 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 300
           ||||||||||| || ||| || |||||||||| |||||||||| ||   |||||| ||||
Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327

                                        
Query: 301 ccggattcagggataagattcagtttagg 329
           ||| |||||| || ||||| | |||||||
Sbjct: 326 ccgtattcagagagaagatgctgtttagg 298



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>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 3    acaagggaaaaagacaaataca 24
            ||||||||||||||||||||||
Sbjct: 6908 acaagggaaaaagacaaataca 6887



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>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence
          Length = 211521

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3     acaagggaaaaagacaaataca 24
             ||||||||||||||||||||||
Sbjct: 86367 acaagggaaaaagacaaataca 86346



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>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 5     aagggaaaaagacaaatacata 26
             ||||||||||||||||||||||
Sbjct: 85293 aagggaaaaagacaaatacata 85272



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>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence
          Length = 240821

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3     acaagggaaaaagacaaataca 24
             ||||||||||||||||||||||
Sbjct: 41781 acaagggaaaaagacaaataca 41802



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>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence
          Length = 154450

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 115   tgcacaagaaggcatgattagg 136
             ||||||||||||||||||||||
Sbjct: 65514 tgcacaagaaggcatgattagg 65535



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>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence
          Length = 155706

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 3      acaagggaaaaagacaaatacataa 27
              |||||||||||||| ||||||||||
Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751



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>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5
          Length = 167014

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 227   ggaaaacattgtccatgttgt 247
             |||||||||||||||||||||
Sbjct: 33995 ggaaaacattgtccatgttgt 34015



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>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence
          Length = 167424

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   catgttgtcacagacagaatt 260
             |||||||||||||||||||||
Sbjct: 92156 catgttgtcacagacagaatt 92136



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>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence
          Length = 179399

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     acaagggaaaaagacaaatacataa 27
             |||||||||||||| ||||||||||
Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564



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>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence
          Length = 235709

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    atagaaatcatgcacaagaaggca 128
              ||||||||||| ||||||||||||
Sbjct: 163342 atagaaatcatacacaagaaggca 163365



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>emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chromosome 1 Contains the 3'
              end of a histone deacetylase 1 (HDAC1) pseudogene, the 3'
              end of the MARK1 gene for MAP/microtubule
              affinity-regulating kinase, a novel gene, a novel gene
              (FLJ14146) and a CpG island, complete sequence
          Length = 121601

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    atagtcactagggcattttg 349
              ||||||||||||||||||||
Sbjct: 119915 atagtcactagggcattttg 119934



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>emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on chromosome 1 Contains
           the 5' end of a novel gene (FLJ20605) and a CpG island,
           complete sequence
          Length = 33915

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 atagtcactagggcattttg 349
           ||||||||||||||||||||
Sbjct: 314 atagtcactagggcattttg 333



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>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and
            glucosyltransferase S
          Length = 10125

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   tacagctgatggtatcaaga 70
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469



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>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence
          Length = 31443

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ggaaaaagacaaatacataa 27
             ||||||||||||||||||||
Sbjct: 11773 ggaaaaagacaaatacataa 11792



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>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17,
             complete sequence
          Length = 120315

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   aacagactgaatgactgcac 160
             ||||||||||||||||||||
Sbjct: 61583 aacagactgaatgactgcac 61602



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>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence
          Length = 163612

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ggaaaaagacaaatacataa 27
              ||||||||||||||||||||
Sbjct: 160156 ggaaaaagacaaatacataa 160175



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>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence
          Length = 177985

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tttggaccacttatgatttt 365
             ||||||||||||||||||||
Sbjct: 57050 tttggaccacttatgatttt 57031



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>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence
          Length = 192355

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     acaaatacataagtaagatg 35
              ||||||||||||||||||||
Sbjct: 111212 acaaatacataagtaagatg 111193



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>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR)
            gene, 5' UTR, exons 1 and 2
          Length = 5132

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    ggaaaaagacaaatacataa 27
            ||||||||||||||||||||
Sbjct: 4760 ggaaaaagacaaatacataa 4779



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>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete
            cds, and gtfK gene, 5' end
          Length = 4941

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   tacagctgatggtatcaaga 70
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,648,072
Number of Sequences: 3902068
Number of extensions: 3648072
Number of successful extensions: 70137
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70087
Number of HSP's gapped (non-prelim): 46
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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