ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5j24 |
|---|---|
| Clone Library Name | barley_pub |
>R10AA_ARATH (Q8VZB9) 60S ribosomal protein L10a-1| Length = 216 Score = 159 bits (401), Expect = 2e-39 Identities = 79/86 (91%), Positives = 81/86 (94%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVG+L MEEKQIFQNVQMSVNF V Sbjct: 131 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVRCLYLKSTMG R+F Sbjct: 191 SLLKKNWQNVRCLYLKSTMGPPQRIF 216
>R10AC_ARATH (P59231) 60S ribosomal protein L10a-3| Length = 217 Score = 159 bits (401), Expect = 2e-39 Identities = 79/86 (91%), Positives = 82/86 (95%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVG+L MEEKQIFQNVQMSVNF V Sbjct: 132 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVRCLYLKSTMG +R+F Sbjct: 192 SLLKKNWQNVRCLYLKSTMGPPNRVF 217
>R10AB_ARATH (P59230) 60S ribosomal protein L10a-2| Length = 216 Score = 157 bits (396), Expect = 8e-39 Identities = 77/86 (89%), Positives = 81/86 (94%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPTLVSHQESLE+KVNETKATVKFQLKKVLCMGVAVG+L MEEKQ+FQNVQMSVNF V Sbjct: 131 GKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVRCLYLKSTMG R+F Sbjct: 191 SLLKKNWQNVRCLYLKSTMGPPQRIF 216
>RL10A_BRARE (Q6PC69) 60S ribosomal protein L10a| Length = 216 Score = 122 bits (305), Expect = 3e-28 Identities = 54/86 (62%), Positives = 73/86 (84%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E+L +KV+E K+T+KFQ+KKVLC+ VAVGH+ M E+++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL10A_XENLA (Q7ZYS8) 60S ribosomal protein L10a| Length = 217 Score = 121 bits (303), Expect = 5e-28 Identities = 53/86 (61%), Positives = 73/86 (84%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E+L +KV+E K+T+KFQ+KKVLC+ VAVGH+ + E+++ N+ +S+NF V Sbjct: 132 GKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 192 SLLKKNWQNVRALYIKSTMGKPQRLY 217
>R10AB_DROME (Q9VTP4) 60S ribosomal protein L10a-2| Length = 217 Score = 120 bits (302), Expect = 7e-28 Identities = 54/86 (62%), Positives = 71/86 (82%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP L+SHQES+ K+ E K+T+KFQ+KKVLC+ VAVGH+GM+ ++ QNV +S+NF V Sbjct: 132 GKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR L++KS+MG RL+ Sbjct: 192 SLLKKNWQNVRSLHVKSSMGPPQRLY 217
>RL10A_ICTPU (Q90YV8) 60S ribosomal protein L10a| Length = 216 Score = 120 bits (301), Expect = 9e-28 Identities = 53/86 (61%), Positives = 72/86 (83%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E+L +KV+E K+T+KFQ+KKVLC+ VAVGH+ M E ++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KS+MGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSSMGKPQRLY 216
>RL10A_CAEEL (Q9N4I4) 60S ribosomal protein L10a| Length = 216 Score = 119 bits (298), Expect = 2e-27 Identities = 53/86 (61%), Positives = 73/86 (84%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP++V+H ESL+SK +E +ATVKFQ+KKVLC+ VAVGH+G+ ++++ N+ +S+NF V Sbjct: 131 GKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR L +KSTMGK R++ Sbjct: 191 SLLKKNWQNVRSLNIKSTMGKPQRVY 216
>RL10A_RAT (P62907) 60S ribosomal protein L10a| Length = 216 Score = 119 bits (297), Expect = 3e-27 Identities = 52/86 (60%), Positives = 72/86 (83%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E++ +KV+E K+T+KFQ+KKVLC+ VAVGH+ M + ++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL10A_MOUSE (P53026) 60S ribosomal protein L10a (CSA-19) (Protein NEDD6)| (Neural precursor cell expressed developmentally down-regulated protein 6) Length = 216 Score = 119 bits (297), Expect = 3e-27 Identities = 52/86 (60%), Positives = 72/86 (83%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E++ +KV+E K+T+KFQ+KKVLC+ VAVGH+ M + ++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL10A_HUMAN (P62906) 60S ribosomal protein L10a (CSA-19)| Length = 216 Score = 119 bits (297), Expect = 3e-27 Identities = 52/86 (60%), Positives = 72/86 (83%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E++ +KV+E K+T+KFQ+KKVLC+ VAVGH+ M + ++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL10A_BOVIN (Q5E9E6) 60S ribosomal protein L10a| Length = 216 Score = 119 bits (297), Expect = 3e-27 Identities = 52/86 (60%), Positives = 72/86 (83%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+L++H E++ +KV+E K+T+KFQ+KKVLC+ VAVGH+ M + ++ N+ ++VNF V Sbjct: 131 GKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL1B_SCHPO (O74836) 60S ribosomal protein L1-B (L10a)| Length = 216 Score = 117 bits (292), Expect = 1e-26 Identities = 53/86 (61%), Positives = 68/86 (79%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+ VSH + L K+ E K+T+KFQLKKVLC+GVAVGH+ M E+Q+ N+ ++VNF V Sbjct: 131 GKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKK WQN+ L +KSTMGK HRL+ Sbjct: 191 SLLKKGWQNIGSLVVKSTMGKPHRLY 216
>RL10A_SPOFR (Q963B6) 60S ribosomal protein L10a| Length = 217 Score = 116 bits (291), Expect = 1e-26 Identities = 53/86 (61%), Positives = 70/86 (81%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP L+SHQES+ K++E KAT+KFQ+KKVLC+ VAVGH+ M ++ QNV +S+NF V Sbjct: 132 GKFPGLLSHQESMTQKIDEVKATIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKK+WQNVR L++KSTMG +L+ Sbjct: 192 SLLKKHWQNVRSLHMKSTMGPPPKLY 217
>RL10A_MACFA (Q4R5P3) 60S ribosomal protein L10a| Length = 216 Score = 115 bits (287), Expect = 4e-26 Identities = 50/86 (58%), Positives = 71/86 (82%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+ ++H E++ +KV+E K+T+KFQ+K+VLC+ VAVGH+ M + ++ N+ ++VNF V Sbjct: 131 GKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVR LY+KSTMGK RL+ Sbjct: 191 SLLKKNWQNVRALYIKSTMGKPQRLY 216
>RL10A_TRYBR (P53028) 60S ribosomal protein L10a| Length = 214 Score = 114 bits (284), Expect = 8e-26 Identities = 53/86 (61%), Positives = 67/86 (77%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT+ + ESL KV E ++TVKFQLKKVLC+G VGH+ M E Q+ QNV M++NF V Sbjct: 129 GKFPTVCAQNESLPDKVLELQSTVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLV 188 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQN++ Y+KSTMGK R++ Sbjct: 189 SLLKKNWQNLKSAYIKSTMGKSQRIY 214
>RL1A_SCHPO (O14363) 60S ribosomal protein L1-A (L10a)| Length = 216 Score = 112 bits (280), Expect = 2e-25 Identities = 51/86 (59%), Positives = 68/86 (79%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP+ VSH + L K+ E K+T+KFQLKKVLC+GVAVGH+ M E+Q+ N+ +++NF V Sbjct: 131 GKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLV 190 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKK WQN+ L +KSTMGK +RL+ Sbjct: 191 SLLKKGWQNIGSLVIKSTMGKPYRLY 216
>RL10A_NEUCR (Q7RZS0) 60S ribosomal protein L10a| Length = 217 Score = 109 bits (273), Expect = 2e-24 Identities = 50/86 (58%), Positives = 67/86 (77%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT VSH + L K+NE K+T+KFQLKKVLCMGVAVG++GM ++Q+ N+ +++N+ V Sbjct: 132 GKFPTPVSHSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKK WQNV L +K+TM RL+ Sbjct: 192 SLLKKGWQNVGSLTIKATMSPPKRLY 217
>RL10A_ASHGO (Q755D9) 60S ribosomal protein L10a| Length = 217 Score = 108 bits (270), Expect = 3e-24 Identities = 52/86 (60%), Positives = 65/86 (75%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT VSH + L SKV + ++T+KFQLKKVLC+ VAVG++ M+E + + MSVNF V Sbjct: 132 GKFPTPVSHNDDLYSKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNV L +KSTMG RL+ Sbjct: 192 SLLKKNWQNVGSLVIKSTMGPAFRLY 217
>RL10A_CHLRE (Q9SW75) 60S ribosomal protein L10a| Length = 213 Score = 108 bits (269), Expect = 4e-24 Identities = 52/86 (60%), Positives = 68/86 (79%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFP ++ ++LE V +TK ++KFQLKKVLCMGVAV ++GM E +I N+ ++NF V Sbjct: 130 GKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLV 187 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNVRCLY+KSTMGK R++ Sbjct: 188 SLLKKNWQNVRCLYIKSTMGKPIRIY 213
>RL10A_CANGA (Q6FRF5) 60S ribosomal protein L10a| Length = 217 Score = 107 bits (266), Expect = 1e-23 Identities = 51/86 (59%), Positives = 64/86 (74%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT VSH + L KV + ++T+KFQLKKVLC+ VAVG++ M+E + + MSVNF V Sbjct: 132 GKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNV L +KSTMG RL+ Sbjct: 192 SLLKKNWQNVGSLVIKSTMGPAFRLY 217
>RL1_YEAST (P53030) 60S ribosomal protein L1 (L10a)| Length = 217 Score = 105 bits (263), Expect = 2e-23 Identities = 51/86 (59%), Positives = 64/86 (74%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT VSH + L KV + ++T+KFQLKKVLC+ VAVG++ MEE + + MSVNF V Sbjct: 132 GKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNV L +KS+MG RL+ Sbjct: 192 SLLKKNWQNVGSLVVKSSMGPAFRLY 217
>RL10A_CANAL (Q9UVJ4) 60S ribosomal protein L10a| Length = 217 Score = 105 bits (263), Expect = 2e-23 Identities = 50/86 (58%), Positives = 64/86 (74%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 G+FPT VSH + L SKV + K+T+KFQLKKVLC+ VAVG++ MEE + + M+ NF V Sbjct: 132 GQFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLV 191 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 SLLKKNWQNV L +KSTMG R++ Sbjct: 192 SLLKKNWQNVGSLVIKSTMGPSFRIY 217
>RL10A_CAERE (Q9NBJ7) 60S ribosomal protein L10a (Fragment)| Length = 112 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/30 (66%), Positives = 27/30 (90%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKK 215 GKFP++V+H ESL+SK +E +ATVKFQ+KK Sbjct: 83 GKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
>RL10A_PIG (P53027) 60S ribosomal protein L10a (Fragment)| Length = 164 Score = 45.4 bits (106), Expect = 4e-05 Identities = 18/34 (52%), Positives = 28/34 (82%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCM 203 GKFP+L++H + +KV+E K+ VKFQ+K+VLC+ Sbjct: 131 GKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 164
>RL10A_ENTHI (O15613) 60S ribosomal protein L10a (Fragment)| Length = 165 Score = 44.7 bits (104), Expect = 6e-05 Identities = 21/41 (51%), Positives = 27/41 (65%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHL 182 GKFP + E L+ K+NE + V QLKKVLCMGV G++ Sbjct: 125 GKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
>RL1_THEAC (Q9HL71) 50S ribosomal protein L1P| Length = 217 Score = 44.3 bits (103), Expect = 8e-05 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + K TVK + + L V VG M+ +I +N+ +N Sbjct: 127 GKMPRPIPPGQDPAPLIKNLKNTVKARSRNALTFHVPVGTRSMDADKISENIMTVINRIT 186 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 L++ N+R +Y+K+TMG Sbjct: 187 GKLERGASNIRSIYVKTTMG 206
>RL1_PYRHO (O57782) 50S ribosomal protein L1P| Length = 219 Score = 44.3 bits (103), Expect = 8e-05 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -3 Query: 301 KFPTLVSH-QESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 K P +V ++E V + K TV+ QLK + VG M ++Q+ +N++ +N + Sbjct: 133 KMPVVVPPTMTNIEPIVEKLKKTVRIQLKDNPVVHAPVGTEKMSDEQLAENIEAVLNAII 192 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRL 50 L++ +R +Y+K+TMG R+ Sbjct: 193 GKLERGENQIRSVYVKTTMGPAVRV 217
>RL1_THEVO (Q97BN2) 50S ribosomal protein L1P| Length = 217 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/81 (28%), Positives = 42/81 (51%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + K TVK + + L + V VG M+ ++I +N+ +N Sbjct: 127 GKMPRPIPPGQDPVPLIKALKNTVKARSRNSLTLHVPVGTRSMDTQKISENIMAILNRIT 186 Query: 124 SLLKKNWQNVRCLYLKSTMGK 62 L++ N++ +Y+K+TMGK Sbjct: 187 GKLERGHSNIKNVYVKTTMGK 207
>RL1_PYRAB (Q9UWR8) 50S ribosomal protein L1P| Length = 219 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = -3 Query: 301 KFPTLVSHQES-LESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 K P +V S LE V + K TV+ QLK + VG M +++I +N++ +N + Sbjct: 133 KMPVVVPPTMSNLEPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIETVLNAII 192 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 L++ ++ +Y+K+TMG Sbjct: 193 GKLERGESQIKSVYVKTTMG 212
>RL1_PYRKO (Q5JH35) 50S ribosomal protein L1P| Length = 216 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = -3 Query: 301 KFPTLVSH-QESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 K P +V +LE V + K TV+ QLK + +G M+++++ +N + +N + Sbjct: 130 KMPVVVPPTMTNLEPIVEKLKKTVRIQLKNNPVVHAPIGTEDMDDEKLAENAEAVLNAII 189 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 + L++ V+ +Y+K+TMG Sbjct: 190 NKLERGENQVKSVYIKTTMG 209
>RL1_METMA (Q8PY52) 50S ribosomal protein L1P| Length = 213 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/85 (27%), Positives = 41/85 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + + + VK + K L VAVG M + +N++ ++ Sbjct: 128 GKMPIPLMPNKDIGELIQSKQNAVKLRSKDRLTFHVAVGRRNMNPDDLSENIETIMSRLE 187 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRL 50 +L K N+R +Y+ +TMGK R+ Sbjct: 188 RVLDKGKHNLRSVYVTTTMGKSERV 212
>RL1_METAC (Q8TI81) 50S ribosomal protein L1P| Length = 213 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + + + VK + K L VAVG M + + +N++ ++ Sbjct: 128 GKMPIPLMPNKDVGELIQSKQNAVKLRSKDRLTFHVAVGRRDMNPEDLAENIETIMSRLE 187 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRL 50 +L K N+R +Y+ +TMGK R+ Sbjct: 188 RVLDKGKHNLRTVYVTTTMGKSERV 212
>RL1_METKA (Q8TX51) 50S ribosomal protein L1P| Length = 214 Score = 40.8 bits (94), Expect = 9e-04 Identities = 19/86 (22%), Positives = 40/86 (46%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK V + + + T + +++ + +G ME +Q+ +N + Sbjct: 129 GKMAKPVPPNADIRALIERAHRTARVRMRDQPVIHTVIGARNMEPEQLAENAMAVLREIT 188 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRLF 47 S L+K+W + +Y+K+TMG R++ Sbjct: 189 SELEKSWAQIDSVYVKTTMGPAERVY 214
>RL1_PYRFU (Q8TZJ9) 50S ribosomal protein L1P| Length = 216 Score = 40.8 bits (94), Expect = 9e-04 Identities = 20/64 (31%), Positives = 37/64 (57%) Frame = -3 Query: 256 VNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXVSLLKKNWQNVRCLYLK 77 V + K TV+ QLK + VG M +++I +N++ +N + L++ V+ +Y+K Sbjct: 146 VEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIEAVLNAIIGKLERGESQVKSVYVK 205 Query: 76 STMG 65 +TMG Sbjct: 206 TTMG 209
>RL1_METBF (Q46EU8) 50S ribosomal protein L1P| Length = 213 Score = 40.0 bits (92), Expect = 0.001 Identities = 22/85 (25%), Positives = 41/85 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + + + ++ + K L V VG M + +NV++ V+ Sbjct: 128 GKMPIPLLPNKDIGELIQSKQNAIRLRSKDKLTFHVPVGRRTMSPDDLAENVEIIVSRLE 187 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRL 50 +L K N+R +Y+ +TMGK R+ Sbjct: 188 RVLDKGRHNLRTVYVTTTMGKSERV 212
>RL1_HALVO (P41199) 50S ribosomal protein L1P| Length = 209 Score = 39.3 bits (90), Expect = 0.003 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK PT + + + VN K TV+ + + VG M +I +N+ + V Sbjct: 123 GKMPTPLQPDDDVVETVNRMKNTVQLRSRDRRTFHTRVGADDMTPDEIAENIDVIVRRLE 182 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 + L+K N+ +Y+K+TMG Sbjct: 183 ATLEKGPLNIDSVYVKTTMG 202
>RL1_NATPD (Q3INI6) 50S ribosomal protein L1P| Length = 212 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/80 (30%), Positives = 39/80 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK PT + + + VN K TV+ + + VG M+ I NV + + Sbjct: 126 GKMPTPLQPDDDVVETVNRMKNTVQVRSGERRTFHTRVGAEDMDADAIADNVDVILRRLF 185 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 + L+K QN+ +Y+K+TMG Sbjct: 186 TDLEKGPQNIDTVYVKTTMG 205
>RL1_METTH (O27716) 50S ribosomal protein L1P| Length = 224 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/84 (26%), Positives = 45/84 (53%) Frame = -3 Query: 301 KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXVS 122 K P V + E +N+ + TVK ++K + VG M+++++ +N++ + Sbjct: 140 KMPKPVPATINPEPILNKLRDTVKVRIKDQPVVHTVVGTEDMDDEKLAENIEAVLQTIDR 199 Query: 121 LLKKNWQNVRCLYLKSTMGKVHRL 50 L+K ++ +Y+K+TMG V R+ Sbjct: 200 KLEKGRNQLKSMYVKTTMGPVVRV 223
>RL1_METJA (P54050) 50S ribosomal protein L1P| Length = 219 Score = 37.7 bits (86), Expect = 0.007 Identities = 22/80 (27%), Positives = 37/80 (46%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P V +++ V K TV + V VG+ M ++QI N++ +N Sbjct: 127 GKMPKPVPANANIKPLVERLKKTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAVLNVVA 186 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 +K +++ Y+K TMG Sbjct: 187 KKYEKGLYHIKDAYVKLTMG 206
>RL1_HALSA (P13575) 50S ribosomal protein L1P (HL8)| Length = 211 Score = 37.4 bits (85), Expect = 0.010 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK PT + + + VN K TV+ + + VG M + I N+ + + Sbjct: 126 GKMPTPLQPDDDVVDTVNRMKNTVQIRSRDRRTFHTRVGAEDMSAEDIASNIDVIMRRLH 185 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 + L+K NV +Y+K+TMG Sbjct: 186 ANLEKGPLNVDSVYVKTTMG 205
>RL1_SULAC (P35024) 50S ribosomal protein L1P| Length = 221 Score = 36.2 bits (82), Expect = 0.022 Identities = 23/81 (28%), Positives = 41/81 (50%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT + + + +N K +V + K + V +G M+ + + +N +N Sbjct: 135 GKFPTPLPNTADISEYINRFKRSVLVKTKDQPQVQVFIGTEDMKPEDLAENAIAVLNAIE 194 Query: 124 SLLKKNWQNVRCLYLKSTMGK 62 + K N+R +Y+K+TMGK Sbjct: 195 NKAKVE-TNLRNIYVKTTMGK 214
>RL1D1_PONPY (Q5RCE6) Ribosomal L1 domain-containing protein 1| Length = 490 Score = 35.4 bits (80), Expect = 0.037 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 274 ESLESKVNET-KATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXVSLLKKNWQN 98 ++L ++N+ TV K C + +GH+GM+ + I +N+ L + W++ Sbjct: 188 KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWES 247 Query: 97 VRCLYLKSTMGKVHRLF*TLV 35 V+ L++K+ +F + V Sbjct: 248 VKLLFVKTEKSAALPIFSSFV 268
>RL1D1_HUMAN (O76021) Ribosomal L1 domain-containing protein 1 (Cellular| senescence-inhibited gene protein) (PBK1 protein) (CATX-11) Length = 490 Score = 35.4 bits (80), Expect = 0.037 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 274 ESLESKVNET-KATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXVSLLKKNWQN 98 ++L ++N+ TV K C + +GH+GM+ + I +N+ L + W++ Sbjct: 188 KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWES 247 Query: 97 VRCLYLKSTMGKVHRLF*TLV 35 V+ L++K+ +F + V Sbjct: 248 VKLLFVKTEKSAALPIFSSFV 268
>RL1_PICTO (Q6L1X9) 50S ribosomal protein L1P| Length = 213 Score = 34.3 bits (77), Expect = 0.082 Identities = 21/81 (25%), Positives = 36/81 (44%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P V + + + K +V+ + + V +G M + ++ N V Sbjct: 122 GKIPRPVPPGQDPTALIENLKKSVRARSRDRRTFHVPIGTREMSDDDLYNNFVTVYKRIV 181 Query: 124 SLLKKNWQNVRCLYLKSTMGK 62 S L K N+ +Y+K+TMGK Sbjct: 182 SRLDKGPGNIDSIYIKTTMGK 202
>RL1_SULTO (Q971J1) 50S ribosomal protein L1P| Length = 222 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/82 (25%), Positives = 40/82 (48%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT + + + + K + + K + V +G M+ + + +N +N Sbjct: 135 GKFPTPLPNAADITEYILRFKRSTLVKTKDQPHVQVFIGTEDMKPEDLAENALAVLNTIE 194 Query: 124 SLLKKNWQNVRCLYLKSTMGKV 59 + K N+R +Y+K+TMGK+ Sbjct: 195 NKAKVE-ANLRAIYVKTTMGKI 215
>RL1_SULSO (P96038) 50S ribosomal protein L1P| Length = 218 Score = 31.2 bits (69), Expect = 0.69 Identities = 23/82 (28%), Positives = 37/82 (45%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GKFPT + + + + K + + K V +G + + +N +N Sbjct: 133 GKFPTPLPNTADISEYILRFKRSTLVKTKDQPQTQVFIGTESQQIADLAENALAVLNVIE 192 Query: 124 SLLKKNWQNVRCLYLKSTMGKV 59 S K Q VR +Y+K+TMGKV Sbjct: 193 S--KGYAQKVRNIYVKTTMGKV 212
>RL1_HALMA (P12738) 50S ribosomal protein L1P (Hmal1) (HL8)| Length = 211 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/80 (23%), Positives = 36/80 (45%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + + + K TV+ + + VG M + I N+ + + Sbjct: 126 GKMPEPLDPDDDVVEVIERMKNTVQLRSGERRTFHTRVGAEDMSAENIADNIDVILRRLH 185 Query: 124 SLLKKNWQNVRCLYLKSTMG 65 + L+K N+ +Y+K+TMG Sbjct: 186 ADLEKGPLNIDTVYVKTTMG 205
>GIGAN_ARATH (Q9SQI2) GIGANTEA protein| Length = 1173 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Frame = +3 Query: 144 ICTFWKICFSSIPRWPTA---------TPMQSTFFNWNLTVALVSL 254 ICT W+ + IP +A TP+Q +WNL + L+ + Sbjct: 462 ICTIWEAAYGLIPLNSSAVDLPEIIVATPLQPPILSWNLYIPLLKV 507
>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)| Length = 572 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -2 Query: 176 GGEADLPERADERELPCLSVEEELAKRAVPVPEEHNGKGAPV 51 GG P E P +EEE+ P PEE G AP+ Sbjct: 90 GGAFPPPPPPIEESFPPAPLEEEIFPSPPPPPEEEGGPEAPI 131
>YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium factor 1)| Length = 1515 Score = 28.1 bits (61), Expect = 5.9 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +3 Query: 93 RTFCQFFFN--RETXKFTLIC-TFWKICFSSIP 182 RTF QFF N + T T+IC T W+ F IP Sbjct: 1066 RTFSQFFVNAVKVTFTITVICATTWQFIFIIIP 1098
>RL1_ARCFU (O28782) 50S ribosomal protein L1P| Length = 215 Score = 28.1 bits (61), Expect = 5.9 Identities = 17/85 (20%), Positives = 37/85 (43%) Frame = -3 Query: 304 GKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGHLGMEEKQIFQNVQMSVNFXV 125 GK P + + ++ + +VK + + +G M+ ++I +N + Sbjct: 130 GKIPQPIPPLADPKPFIDRLRNSVKIRTRDKTTFHAPIGSENMDVEKIAENAMEILKVVE 189 Query: 124 SLLKKNWQNVRCLYLKSTMGKVHRL 50 + + Q V+ +Y+K TMG R+ Sbjct: 190 NKYENPTQVVKSVYVKKTMGPAVRV 214
>ACDB_BACSU (P45857) Acyl-CoA dehydrogenase (EC 1.3.99.-)| Length = 378 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -2 Query: 167 ADLPERADERELPCLSVEEELAKRAVPVPEEHNGKGAPVV 48 A++ E+ DE + + +PVPE++ G GA VV Sbjct: 26 AEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAGADVV 65
>DRL26_ARATH (Q84WD3) Probable disease resistance protein At4g19060| Length = 383 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 Query: 206 HGCCRWPPGYGGEADLPERADERELPCLSVEEELAKRAVP 87 H C +P G+GG+ + R DER + EEE +R P Sbjct: 256 HLSCGFPKGFGGKVIMTSR-DERLAKAIVGEEENLQRLFP 294
>PLC2_CAEEL (Q22267) Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase| T06E8.1 (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 282 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Frame = +3 Query: 69 IVLFRYRHRTFCQFFFNRETXKFTLICTFWKICFSSIPRW---PTATPMQSTFFNW 227 I+ Y T C ++ FT++ ++C + IP W A + +FF W Sbjct: 15 ILFILYNISTVCHYYMRISFYYFTILLHGMEVCVTMIPSWLNGKGADYVFHSFFYW 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,349,758 Number of Sequences: 219361 Number of extensions: 776557 Number of successful extensions: 2750 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 2662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2746 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
