ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5j24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103915.1| Zea mays PCO106165 mRNA sequence Length = 978 Score = 228 bits (115), Expect = 8e-57 Identities = 225/262 (85%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcaccgcacgttttgc 104 ||||||| ||||| |||||||||||| |||||||||||||||| ||| | ||| || ||| Sbjct: 766 tagaacagccggtacacctttcccatagtgctcttcaggtacaagcatctcacattctgc 707 Query: 105 caattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaagatc 164 |||||||| ||||| || || || ||||||| || ||||| |||||||||||||||||| Sbjct: 706 caattctttttcaagagcgacacgaggaagttgacactcatttgcacgttctggaagatc 647 Query: 165 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 224 |||||||| ||||| || || |||||| ||||||||||||||||||||||| |||| | Sbjct: 646 tgcttctcatccatgccgcagttgccaacagcaacacccatgcaaagcaccttcttcagc 587 Query: 225 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 284 |||||||| || || ||||| |||||||||||||||||||||||||| |||||||| | | Sbjct: 586 tggaacttaactgtagcctttgtctcattaaccttggactcaagggattcctggtgtgtc 527 Query: 285 accaaagttggaaactttcctg 306 ||||| || || || ||||||| Sbjct: 526 accaaggtagggaattttcctg 505
>ref|NM_190697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 222 bits (112), Expect = 5e-55 Identities = 216/251 (86%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcaccgcacgttttgc 104 ||||||| |||| ||| |||||||| |||||||||||||||| ||| | |||||| ||| Sbjct: 626 tagaacacccggatcacttttcccatagtgctcttcaggtacaagcatctcacgttctgc 567 Query: 105 caattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaagatc 164 |||||||||||||| ||||||||| |||||||||||||||| ||||| || ||||| || Sbjct: 566 caattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattttggaaaatt 507 Query: 165 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 224 ||||||||||||||| | || ||| || ||||||||||||||||| |||||||||| Sbjct: 506 tgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacctttttcagt 447 Query: 225 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 284 |||||||| || || ||||| ||||| ||||||||||||||||| || |||||||||| | Sbjct: 446 tggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcctggtgagtc 387 Query: 285 accaaagttgg 295 ||||| ||||| Sbjct: 386 accaacgttgg 376
>dbj|AK102574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097O05, full insert sequence Length = 917 Score = 222 bits (112), Expect = 5e-55 Identities = 216/251 (86%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcaccgcacgttttgc 104 ||||||| |||| |||||||||||| |||||||||||||||| ||||| ||||| ||| Sbjct: 723 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacctaacgttctgc 664 Query: 105 caattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaagatc 164 |||||||||||||| || || ||| |||||||||||||||||||||| || ||||||||| Sbjct: 663 caattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaagatc 604 Query: 165 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 224 ||||||||||||||| | || |||||| |||||||||||||| || ||||| |||| | Sbjct: 603 tgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttcagc 544 Query: 225 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 284 ||||| || || || ||||| ||||||||||||||||||||||| || ||||| || | | Sbjct: 543 tggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgcgtc 484 Query: 285 accaaagttgg 295 |||| |||||| Sbjct: 483 accagagttgg 473
>dbj|AK062103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A11, full insert sequence Length = 915 Score = 222 bits (112), Expect = 5e-55 Identities = 216/251 (86%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcaccgcacgttttgc 104 ||||||| |||| |||||||||||| |||||||||||||||| ||||| ||||| ||| Sbjct: 722 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacctaacgttctgc 663 Query: 105 caattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaagatc 164 |||||||||||||| || || ||| |||||||||||||||||||||| || ||||||||| Sbjct: 662 caattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattttggaagatc 603 Query: 165 tgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttcaac 224 ||||||||||||||| | || |||||| |||||||||||||| || ||||| |||| | Sbjct: 602 tgcttctcctccatagcacagttgccaacagcaacacccatgcagagaaccttcttcagc 543 Query: 225 tggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtgagac 284 ||||| || || || ||||| ||||||||||||||||||||||| || ||||| || | | Sbjct: 542 tggaatttcactgtagccttagtctcattaaccttggactcaagtgattcctgatgcgtc 483 Query: 285 accaaagttgg 295 |||| |||||| Sbjct: 482 accagagttgg 472
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 1e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||| || Sbjct: 37227209 acgttctgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattt 37227150 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 ||||| || ||||||||||||||| | || ||| || ||||||||||||||||| ||| Sbjct: 37227149 tggaaaatttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacc 37227090 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcc 275 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| || ||| Sbjct: 37227089 tttttcagttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcc 37227030 Query: 276 tggtgagacaccaaagttgg 295 ||||||| |||||| ||||| Sbjct: 37227029 tggtgagtcaccaacgttgg 37227010 Score = 46.1 bits (23), Expect = 0.065 Identities = 38/43 (88%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtaca 87 ||||||| |||| ||| |||||||| |||||||||||||||| Sbjct: 37227633 tagaacacccggatcacttttcccatagtgctcttcaggtaca 37227591
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 184 bits (93), Expect = 1e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||| || Sbjct: 101865 acgttctgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattt 101806 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 ||||| || ||||||||||||||| | || ||| || ||||||||||||||||| ||| Sbjct: 101805 tggaaaatttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacc 101746 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcc 275 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| || ||| Sbjct: 101745 tttttcagttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcc 101686 Query: 276 tggtgagacaccaaagttgg 295 ||||||| |||||| ||||| Sbjct: 101685 tggtgagtcaccaacgttgg 101666 Score = 46.1 bits (23), Expect = 0.065 Identities = 38/43 (88%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtaca 87 ||||||| |||| ||| |||||||| |||||||||||||||| Sbjct: 102289 tagaacacccggatcacttttcccatagtgctcttcaggtaca 102247
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 184 bits (93), Expect = 1e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||| || Sbjct: 64198 acgttctgccaattcttcttcaaaagagagacaaggaagttcacgctcatttgcacattt 64139 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 ||||| || ||||||||||||||| | || ||| || ||||||||||||||||| ||| Sbjct: 64138 tggaaaatttgcttctcctccatagcacagttgcctacagcaacacccatgcaaagaacc 64079 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcc 275 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| || ||| Sbjct: 64078 tttttcagttggaacttcactgtagccttagtctcgttaaccttggactcaagtgattcc 64019 Query: 276 tggtgagacaccaaagttgg 295 ||||||| |||||| ||||| Sbjct: 64018 tggtgagtcaccaacgttgg 63999 Score = 46.1 bits (23), Expect = 0.065 Identities = 38/43 (88%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtaca 87 ||||||| |||| ||| |||||||| |||||||||||||||| Sbjct: 64622 tagaacacccggatcacttttcccatagtgctcttcaggtaca 64580
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 176 bits (89), Expect = 3e-41 Identities = 172/200 (86%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||| ||||||||||||||||| || || ||| |||||||||||||||||||||| || Sbjct: 12871060 acgttctgccaattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattt 12871001 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 |||||||||||||||||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 12871000 tggaagatctgcttctcctccatagcacagttgccaacagcaacacccatgcagagaacc 12870941 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcc 275 || |||| |||||| || || || ||||| ||||||||||||||||||||||| || ||| Sbjct: 12870940 ttcttcagctggaatttcactgtagccttagtctcattaaccttggactcaagtgattcc 12870881 Query: 276 tggtgagacaccaaagttgg 295 || || | ||||| |||||| Sbjct: 12870880 tgatgcgtcaccagagttgg 12870861 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcacc 93 ||||||| |||| |||||||||||| |||||||||||||||| ||||| Sbjct: 12871218 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacc 12871170
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 176 bits (89), Expect = 3e-41 Identities = 172/200 (86%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||| ||||||||||||||||| || || ||| |||||||||||||||||||||| || Sbjct: 90542 acgttctgccaattcttcttcaaaagggaaacaaggaagttcacgctcatctgcacattt 90483 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 |||||||||||||||||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 90482 tggaagatctgcttctcctccatagcacagttgccaacagcaacacccatgcagagaacc 90423 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcc 275 || |||| |||||| || || || ||||| ||||||||||||||||||||||| || ||| Sbjct: 90422 ttcttcagctggaatttcactgtagccttagtctcattaaccttggactcaagtgattcc 90363 Query: 276 tggtgagacaccaaagttgg 295 || || | ||||| |||||| Sbjct: 90362 tgatgcgtcaccagagttgg 90343 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 45 tagaacaaccggtgcacctttcccattgtgctcttcaggtacaggcacc 93 ||||||| |||| |||||||||||| |||||||||||||||| ||||| Sbjct: 90700 tagaacactcggtacacctttcccatggtgctcttcaggtacaagcacc 90652
>gb|BT012985.1| Lycopersicon esculentum clone 114201R, mRNA sequence Length = 895 Score = 155 bits (78), Expect = 1e-34 Identities = 200/241 (82%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||||| ||||| ||||| ||||| |||||||||||||| | ||||| Sbjct: 712 cccatggtgctcttcaagtacaagcaccttacgttctgccaattcttctttagaagagaa 653 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||||||||||| ||||| ||||||||||| || ||||| |||||| | Sbjct: 652 actaagaagttcacgctcatttgcacattctggaagatttgtttctcttccatatcacaa 593 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | ||||| ||||||||||||||||||||||| |||||||||||||||| || |||||| Sbjct: 592 ttaccaacagcaacacccatgcaaagcaccttcttcaactggaacttgatggtagccttg 533 Query: 246 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 305 || ||||||||||| ||||| || ||||| ||||| || || | ||||||||||| ||| Sbjct: 532 gtttcattaaccttagactcgagtgactcttggtgggaaacaagggttggaaacttacct 473 Query: 306 g 306 | Sbjct: 472 g 472
>ref|NM_100709.3| Arabidopsis thaliana structural constituent of ribosome AT1G08360 mRNA, complete cds Length = 930 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 688 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 629 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 628 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 569 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 568 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 509 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 508 tgtttcattcacctttgactccaaggattcctggtg 473
>gb|AY114542.1| Arabidopsis thaliana putative ribosomal protein L10 (At1g08360) mRNA, complete cds Length = 714 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 630 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 571 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 570 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 511 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 510 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 451 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 450 tgtttcattcacctttgactccaaggattcctggtg 415
>gb|AY065077.1| Arabidopsis thaliana putative ribosomal protein L10 (At1g08360; T27G7.6) mRNA, complete cds Length = 883 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 684 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 625 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 624 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 565 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 564 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 505 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 504 tgtttcattcacctttgactccaaggattcctggtg 469
>emb|BX814727.1|CNS0ACAP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 870 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 688 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 629 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 628 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 569 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 568 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 509 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 508 tgtttcattcacctttgactccaaggattcctggtg 473
>emb|BX816002.1|CNS0ABUG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 660 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 601 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 600 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 541 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 540 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 481 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 480 tgtttcattcacctttgactccaaggattcctggtg 445
>emb|BX841788.1|CNS09Y5M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 667 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 608 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 607 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 548 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 547 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 488 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 487 tgtttcattcacctttgactccaaggattcctggtg 452
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 137 bits (69), Expect = 2e-29 Identities = 179/216 (82%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 ||||||||||||||| ||||||| |||| || |||||||| ||||||||||| || || Sbjct: 18507 tcccattgtgctcttgaggtacaaacacctgacattttgccagttcttcttcaatagcga 18448 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| |||||||||||||| ||||| |||||||||||||| ||||| || Sbjct: 18447 gacgaggaagttgacgctcatctgcacattctgaaagatctgcttctcttccattgaaag 18388 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||| |||||||| || ||||| |||| ||||||||| || || ||||| Sbjct: 18387 gttaccaactgcaactcccatgcacagaaccttcttcagctggaacttcactgttgcctt 18328 Query: 245 ggtctcattaaccttggactcaagggactcctggtg 280 || ||||| ||||| ||||| | ||| |||||||| Sbjct: 18327 tgtttcattcacctttgactccaaggattcctggtg 18292
>ref|NM_179773.1| Arabidopsis thaliana structural constituent of ribosome AT2G27530 transcript variant AT2G27530.2 mRNA, complete cds Length = 904 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 695 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 636 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 635 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 576 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 575 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 516 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 515 ggtctcattcacctt 501
>ref|NM_128313.2| Arabidopsis thaliana structural constituent of ribosome AT2G27530 transcript variant AT2G27530.1 mRNA, complete cds Length = 935 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 726 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 667 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 666 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 607 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 606 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 547 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 546 ggtctcattcacctt 532
>gb|AY056371.1| Arabidopsis thaliana putative 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 682 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 630 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 571 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 570 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 511 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 510 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 451 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 450 ggtctcattcacctt 436
>gb|AF360146.1| Arabidopsis thaliana putative 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 916 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 691 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 632 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 631 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 572 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 571 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 512 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 511 ggtctcattcacctt 497
>gb|AY081263.1| Arabidopsis thaliana 60S ribosomal protein L10A (At2g27530) mRNA, complete cds Length = 891 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 726 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 667 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 666 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 607 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 606 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 547 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 546 ggtctcattcacctt 532
>gb|BT006262.1| Arabidopsis thaliana At2g27530 mRNA, complete cds Length = 651 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 630 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 571 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 570 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 511 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 510 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 451 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 450 ggtctcattcacctt 436
>emb|BX820970.1|CNS0A84X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 135 bits (68), Expect = 9e-29 Identities = 163/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 669 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 610 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| || ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 609 gacgaggaagttaacactcatctgcacattctggaagagctgcttctcttccatggaaag 550 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 549 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 490 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 489 ggtctcattcacctt 475
>gb|BT016546.1| Zea mays clone Contig379 mRNA sequence Length = 937 Score = 131 bits (66), Expect = 1e-27 Identities = 179/217 (82%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||| | ||| ||||| | ||| || ||||| |||||||||| || || Sbjct: 688 cccatggtgctcttgacgtagaggcatctcacattctgccagttcttcttcagaagggaa 629 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 ||| ||||||||||||||||||| | |||||| |||||||||||||||||| ||| | Sbjct: 628 acaaggaagttcacgctcatctggatgttctgctggatctgcttctcctccatcgccaag 569 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | ||| ||||| || ||||||||||| ||||| || | |||||||||||| || ||||| Sbjct: 568 ttgccgacggcgacgcccatgcaaaggaccttcttgagctggaacttgacggttgcctta 509 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 ||||| || |||||||| || ||||| |||||||||| Sbjct: 508 gtctcgttcaccttggattcgagggattcctggtgag 472
>gb|AY109405.1| Zea mays CL4809_1 mRNA sequence Length = 1296 Score = 131 bits (66), Expect = 1e-27 Identities = 179/217 (82%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||| | ||| ||||| | ||| || ||||| |||||||||| || || Sbjct: 966 cccatggtgctcttgacgtagaggcatctcacattctgccagttcttcttcagaagggaa 907 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 ||| ||||||||||||||||||| | |||||| |||||||||||||||||| ||| | Sbjct: 906 acaaggaagttcacgctcatctggatgttctgctggatctgcttctcctccatcgccaag 847 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | ||| ||||| || ||||||||||| ||||| || | |||||||||||| || ||||| Sbjct: 846 ttgccgacggcgacgcccatgcaaaggaccttcttgagctggaacttgacggttgcctta 787 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 ||||| || |||||||| || ||||| |||||||||| Sbjct: 786 gtctcgttcaccttggattcgagggattcctggtgag 750
>emb|BX818761.1|CNS0A9SM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 850 Score = 127 bits (64), Expect = 2e-26 Identities = 162/195 (83%) Strand = Plus / Minus Query: 65 tcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagaga 124 |||||| |||||||||| ||||| |||| ||||||||||||||||||||||| || || Sbjct: 669 tcccatggtgctcttcaagtacaaacaccttacgttttgccaattcttcttcaagagcga 610 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccag 184 ||| ||||||| | ||||||||||| |||||||||| ||||||||| ||||| || Sbjct: 609 gacgaggaagttaaaactcatctgcacattctggaagagctgcttctcttccatggaaag 550 Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcctt 244 || ||||| ||||||||||| || || || || |||||||||||||| || || || || Sbjct: 549 gttaccaacagcaacacccatacacagaactttcttcaactggaacttcactgttgcttt 490 Query: 245 ggtctcattaacctt 259 ||||||||| ||||| Sbjct: 489 ggtctcattcacctt 475
>ref|XM_483755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 123 bits (62), Expect = 3e-25 Identities = 178/217 (82%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||||||||| || | ||||||||||| ||| || ||||| ||||||||||| || || Sbjct: 703 cccattgtgcttttgatgtacaggcacctcacattctgccagttcttcttcaaaagggac 644 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 643 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccatcgacaag 584 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 583 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 524 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 |||||||| |||||||| ||||| ||||||||||||| Sbjct: 523 gtctcattgaccttggattcaagagactcctggtgag 487
>dbj|AK061522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B06, full insert sequence Length = 936 Score = 123 bits (62), Expect = 3e-25 Identities = 178/217 (82%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||||||||| || | ||||||||||| ||| || ||||| ||||||||||| || || Sbjct: 703 cccattgtgcttttgatgtacaggcacctcacattctgccagttcttcttcaaaagggac 644 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 643 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccatcgacaag 584 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 583 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 524 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 |||||||| |||||||| ||||| ||||||||||||| Sbjct: 523 gtctcattgaccttggattcaagagactcctggtgag 487
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 121 bits (61), Expect = 1e-24 Identities = 138/164 (84%) Strand = Plus / Plus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||||||||||||||||||||| || ||||| ||||||| || ||||||||||| ||| Sbjct: 68580 acgttttgccaattcttcttcaagagcgagacgaggaagttaacactcatctgcacattc 68639 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 ||||||| ||||||||| ||||| |||| ||||| ||||||||||| || || || Sbjct: 68640 tggaagagctgcttctcttccatggaaaggttaccaacagcaacacccatacacagaact 68699 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaacctt 259 || |||||||||||||| || || || ||||||||||| ||||| Sbjct: 68700 ttcttcaactggaacttcactgttgctttggtctcattcacctt 68743
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 121 bits (61), Expect = 1e-24 Identities = 138/164 (84%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttc 155 ||||||||||||||||||||||| || ||||| ||||||| || ||||||||||| ||| Sbjct: 116093 acgttttgccaattcttcttcaagagcgagacgaggaagttaacactcatctgcacattc 116034 Query: 156 tggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacc 215 ||||||| ||||||||| ||||| |||| ||||| ||||||||||| || || || Sbjct: 116033 tggaagagctgcttctcttccatggaaaggttaccaacagcaacacccatacacagaact 115974 Query: 216 tttttcaactggaacttgacagtggccttggtctcattaacctt 259 || |||||||||||||| || || || ||||||||||| ||||| Sbjct: 115973 ttcttcaactggaacttcactgttgctttggtctcattcacctt 115930
>gb|AY846821.1| Triticum aestivum ribosomal protein L10A mRNA, complete cds Length = 788 Score = 107 bits (54), Expect = 2e-20 Identities = 194/241 (80%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||||| ||||||||||| ||| || |||||||||||||||| || || Sbjct: 700 cccatggtgctcttcacgtacaggcacctcacattctgccaattcttcttcaggagggac 641 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 ||| ||||||| || ||||| || | ||| || |||||||||||| ||||| || | Sbjct: 640 acaaggaagttgacactcatttggatgttttgttggatctgcttctcgtccatcgacaag 581 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | ||| || ||||||||||||||||| ||||| || | |||||||||||| || || || Sbjct: 580 ttgcccacagcaacacccatgcaaagaaccttctttagctggaacttgactgtagctttt 521 Query: 246 gtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaactttcct 305 ||||| || ||||||| ||||| || ||||||||| |||| ||| |||||||| ||| Sbjct: 520 gtctcgttgaccttggcttcaagagattcctggtgactaaccagagtgggaaacttgcct 461 Query: 306 g 306 | Sbjct: 460 g 460
>ref|NM_122149.3| Arabidopsis thaliana structural constituent of ribosome AT5G22440 mRNA, complete cds Length = 900 Score = 99.6 bits (50), Expect = 5e-18 Identities = 97/113 (85%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 |||||||||||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| Sbjct: 675 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 616 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 178 || ||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 615 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 563
>ref|XM_483761.1| Oryza sativa (japonica cultivar-group), mRNA Length = 937 Score = 99.6 bits (50), Expect = 5e-18 Identities = 175/217 (80%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||| | ||| ||||||| ||| || ||||| ||||| ||||| || || Sbjct: 699 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 640 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 639 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 580 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 579 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 520 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 ||||| || |||||||| ||||| ||||||||||||| Sbjct: 519 gtctcgttgaccttggattcaagagactcctggtgag 483
>gb|AY077657.1| Arabidopsis thaliana AT5g22440/MWD9_24 mRNA, complete cds Length = 654 Score = 99.6 bits (50), Expect = 5e-18 Identities = 97/113 (85%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 |||||||||||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| Sbjct: 632 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 573 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 178 || ||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 572 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 520
>gb|AY037253.1| Arabidopsis thaliana AT5g22440/MWD9_24 mRNA, complete cds Length = 864 Score = 99.6 bits (50), Expect = 5e-18 Identities = 97/113 (85%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 |||||||||||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| Sbjct: 673 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 614 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 178 || ||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 613 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 561
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 99.6 bits (50), Expect = 5e-18 Identities = 148/181 (81%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaag 161 ||||| ||||||||||| || || || ||||||| |||||||| || | ||| || | Sbjct: 27924075 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 27924016 Query: 162 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 221 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 27924015 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 27923956 Query: 222 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 281 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 27923955 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 27923896 Query: 282 g 282 | Sbjct: 27923895 g 27923895 Score = 83.8 bits (42), Expect = 3e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 161 gatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttttt 220 |||||||||||||||||| || || || || |||||||||||||| || ||||| || Sbjct: 27957744 gatctgcttctcctccattgacaagttacccacagcaacacccatgcacagaaccttctt 27957685 Query: 221 caactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtg 280 || |||||||||||| || || || ||||| || |||||||| ||||| ||||||||||| Sbjct: 27957684 cagctggaacttgactgtagctttcgtctcgttgaccttggattcaagagactcctggtg 27957625 Query: 281 ag 282 || Sbjct: 27957624 ag 27957623
>emb|BX829886.1|CNS0A1EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 99.6 bits (50), Expect = 5e-18 Identities = 97/113 (85%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 |||||||||||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| Sbjct: 658 cccattgtgctcttcaagtacaagcacctcacattttgccagtttttcttcaagagagaa 599 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 178 || ||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 598 acgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 546
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 99.6 bits (50), Expect = 5e-18 Identities = 148/181 (81%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaag 161 ||||| ||||||||||| || || || ||||||| |||||||| || | ||| || | Sbjct: 1567 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 1508 Query: 162 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 221 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 1507 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 1448 Query: 222 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 281 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 1447 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 1388 Query: 282 g 282 | Sbjct: 1387 g 1387 Score = 83.8 bits (42), Expect = 3e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 161 gatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttttt 220 |||||||||||||||||| || || || || |||||||||||||| || ||||| || Sbjct: 35236 gatctgcttctcctccattgacaagttacccacagcaacacccatgcacagaaccttctt 35177 Query: 221 caactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtg 280 || |||||||||||| || || || ||||| || |||||||| ||||| ||||||||||| Sbjct: 35176 cagctggaacttgactgtagctttcgtctcgttgaccttggattcaagagactcctggtg 35117 Query: 281 ag 282 || Sbjct: 35116 ag 35115
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 99.6 bits (50), Expect = 5e-18 Identities = 148/181 (81%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaag 161 ||||| ||||||||||| || || || ||||||| |||||||| || | ||| || | Sbjct: 132153 tgccagttcttcttcaaaagggacacgaggaagttgacgctcatttggatgttttgctgg 132094 Query: 162 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 221 ||||||||||||||||| || || || || |||||||||||||| || ||||| ||| Sbjct: 132093 atctgcttctcctccatcgacaagttacccacagcaacacccatgcacagaaccttcttc 132034 Query: 222 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 281 | |||||||||||| || || || |||||||| |||||||| ||||| |||||||||||| Sbjct: 132033 agctggaacttgactgtagctttcgtctcattgaccttggattcaagagactcctggtga 131974 Query: 282 g 282 | Sbjct: 131973 g 131973
>dbj|AK122095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C22, full insert sequence Length = 937 Score = 99.6 bits (50), Expect = 5e-18 Identities = 175/217 (80%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||| | ||| ||||||| ||| || ||||| ||||| ||||| || || Sbjct: 699 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 640 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 639 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 580 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 579 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 520 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 ||||| || |||||||| ||||| ||||||||||||| Sbjct: 519 gtctcgttgaccttggattcaagagactcctggtgag 483
>dbj|AK071249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C14, full insert sequence Length = 982 Score = 99.6 bits (50), Expect = 5e-18 Identities = 175/217 (80%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacagagag 125 ||||| |||||||| | ||| ||||||| ||| || ||||| ||||| ||||| || || Sbjct: 771 cccatggtgctcttgatgtaaaggcacctcacattctgccagttctttttcaaaagggac 712 Query: 126 acanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccatacccagg 185 || ||||||| |||||||| || | ||| || |||||||||||||||||| || | Sbjct: 711 acgaggaagttgacgctcatttggatgttttgctggatctgcttctcctccattgacaag 652 Query: 186 tggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggccttg 245 | || || |||||||||||||| || ||||| |||| |||||||||||| || || || Sbjct: 651 ttacccacagcaacacccatgcacagaaccttcttcagctggaacttgactgtagctttc 592 Query: 246 gtctcattaaccttggactcaagggactcctggtgag 282 ||||| || |||||||| ||||| ||||||||||||| Sbjct: 591 gtctcgttgaccttggattcaagagactcctggtgag 555
>gb|AY104248.1| Zea mays PCO114889 mRNA sequence Length = 1019 Score = 99.6 bits (50), Expect = 5e-18 Identities = 148/181 (81%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctggaag 161 ||||| |||||||||| ||||| || ||||||| | ||||||||| | |||||| | Sbjct: 663 tgccagttcttcttcagaagagacacgaggaagttgatgctcatctggatgttctgttgg 604 Query: 162 atctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcacctttttc 221 |||||||||||||||||| ||||| || || || |||||||||||||| || || ||| Sbjct: 603 atctgcttctcctccatagacaggttaccgaccgcgacacccatgcaaaggactttcttc 544 Query: 222 aactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctggtga 281 | || |||||||| || ||||| |||||||| |||||||| || ||||| ||||||||| Sbjct: 543 agttgaaacttgactgtagccttcgtctcattcaccttggattccagggattcctggtga 484 Query: 282 g 282 | Sbjct: 483 g 483
>emb|BX832559.1|CNS0A14N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1299 Score = 85.7 bits (43), Expect = 8e-14 Identities = 97/114 (85%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 66 cccattgtgctcttcaggtacaggcaccg-cacgttttgccaattcttcttcaacagaga 124 |||||||||||||||| ||||| ||||| ||| |||||||| || |||||||| ||||| Sbjct: 1006 cccattgtgctcttcaagtacaagcaccatcacattttgccagtttttcttcaagagaga 947 Query: 125 gacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccat 178 || ||||||| || |||||||| || || || |||||||||||||||||||| Sbjct: 946 aacgaggaagttaacactcatctgaacattttgaaagatctgcttctcctccat 893
>gb|AY389626.1| Hyacinthus orientalis 60S ribosomal protein L10A (RPL10A) mRNA, partial cds Length = 756 Score = 81.8 bits (41), Expect = 1e-12 Identities = 193/244 (79%) Strand = Plus / Minus Query: 63 tttcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttcaacaga 122 |||||||| ||||||||||||| || ||| || || ||||||||||||||||||| || | Sbjct: 583 tttcccatggtgctcttcaggtgcaagcatcggacattttgccaattcttcttcagcaaa 524 Query: 123 gagacanggaagttcacgctcatctgcacgttctggaagatctgcttctcctccataccc 182 || || ||||||| || || | || || ||||| |||||||| || || ||||| || Sbjct: 523 gataccaggaagttgacactgagttgtacattctgaaagatctgtttttcttccatcccg 464 Query: 183 aggtggccaacggcaacacccatgcaaagcacctttttcaactggaacttgacagtggcc 242 || ||||| ||||||||||||||||| || || || | ||| ||||| || | || Sbjct: 463 cagtttccaacagcaacacccatgcaaagaactttcttgagctgaaacttaaccattgct 404 Query: 243 ttggtctcattaaccttggactcaagggactcctggtgagacaccaaagttggaaacttt 302 ||||| |||||||| || | ||| | ||| ||||| |||| |||||| || ||||||||| Sbjct: 403 ttggtttcattaactttcgcctccaaggattcctgatgagtcaccaatgtaggaaacttt 344 Query: 303 cctg 306 |||| Sbjct: 343 cctg 340
>gb|DQ160125.1| Taraxacum officinale TO97-3 (To97-3) mRNA, partial cds Length = 310 Score = 79.8 bits (40), Expect = 5e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 153 ttctggaagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagc 212 |||||||||||||||||||| ||||| | || ||||| ||||| ||||| |||||| Sbjct: 293 ttctggaagatctgcttctcttccatgctgcagtttccaacagcaactcccatacaaagc 234 Query: 213 acctttttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggac 272 ||| |||| |||||||||||||| || ||||||||||| ||||| | ||||||||| Sbjct: 233 acccccttcagttggaacttgacagttgctttggtctcattcacctttgcctcaagggat 174 Query: 273 tcctggtg 280 |||||||| Sbjct: 173 tcctggtg 166
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 73.8 bits (37), Expect = 3e-10 Identities = 147/184 (79%) Strand = Plus / Plus Query: 99 ttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctgg 158 |||||||| ||||| ||||||| ||||||| ||||||| || |||| |||||||| || Sbjct: 49553 ttttgccagttctttttcaacaaagagacaaggaagttaacactcagttgcacgttttga 49612 Query: 159 aagatctgcttctcctccatacccaggtggccaacggcaacacccatgcaaagcaccttt 218 |||||||| || || ||||| | | | || ||||| || |||||||| ||||||||| Sbjct: 49613 aagatctgtttttcttccatgctaacattacccacggcgactcccatgcagagcaccttt 49672 Query: 219 ttcaactggaacttgacagtggccttggtctcattaaccttggactcaagggactcctgg 278 || | ||| || ||||| | ||||| |||||||||||||| | |||||||| || ||| Sbjct: 49673 ttgagctgaaatttgaccatagccttagtctcattaacctttgcttcaagggattcttgg 49732 Query: 279 tgag 282 |||| Sbjct: 49733 tgag 49736
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 65.9 bits (33), Expect = 7e-08 Identities = 68/80 (85%) Strand = Plus / Plus Query: 99 ttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctgg 158 |||||||| || |||||||| ||||| || ||||||| || |||||||| || || || Sbjct: 74399 ttttgccagtttttcttcaagagagaaacgaggaagttaacactcatctgaacattttga 74458 Query: 159 aagatctgcttctcctccat 178 |||||||||||||||||||| Sbjct: 74459 aagatctgcttctcctccat 74478 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 cccattgtgctcttcaggtacaggcacc 93 |||||||||||||||| ||||| ||||| Sbjct: 74280 cccattgtgctcttcaagtacaagcacc 74307
>emb|AJ718244.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-13-142, cultivar Bright Yellow 2 Length = 107 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 62 ctttcccattgtgctcttcaggtacaggcaccgcacgttttgccaattcttcttca 117 ||||||||| |||||||||| ||||||||||| || |||||||||||||| |||| Sbjct: 94 ctttcccatggtgctcttcaagtacaggcacctaacattttgccaattctttttca 39
>gb|DQ226619.1| Boechera divaricarpa isolate SLW-4-A06 mRNA sequence Length = 634 Score = 58.0 bits (29), Expect = 2e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 99 ttttgccaattcttcttcaacagagagacanggaagttcacgctcatctgcacgttctgg 158 |||||||| || |||||||| || || || ||||||| || |||||||| || ||||| Sbjct: 626 ttttgccagtttttcttcaagagtgaaacgaggaagttaacactcatctgaacattctga 567 Query: 159 aagatctgcttctcctccat 178 |||||||||||||| ||||| Sbjct: 566 aagatctgcttctcttccat 547
>emb|AJ439529.1|PSP439529 Polytomella sp. 'Pringsheim 198.80' mRNA for 60S ribosomal protein l10a (r10a gene) Length = 756 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 190 caacggcaacacccatgcaaagcacctttttcaactggaacttga 234 |||||||||||||||||||||| ||||| || | ||||||||||| Sbjct: 506 caacggcaacacccatgcaaagaaccttcttaagctggaacttga 462
>dbj|AK108883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-D09, full insert sequence Length = 1289 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 198 acacccatgcaaagcacctttttcaactggaacttgacagtggccttggtctcatt 253 ||||||||||| |||||||| |||| ||||||||||| | |||||||||||||| Sbjct: 550 acacccatgcacagcaccttcttcagctggaacttgatggacgccttggtctcatt 495
>ref|XM_362251.1| Magnaporthe grisea 70-15 hypothetical protein (MG04696.4) partial cds Length = 468 Score = 46.1 bits (23), Expect = 0.065 Identities = 38/43 (88%) Strand = Plus / Minus Query: 192 acggcaacacccatgcaaagcacctttttcaactggaacttga 234 ||||| ||||||||||| || ||||| |||| ||||||||||| Sbjct: 320 acggcgacacccatgcagagaaccttcttcagctggaacttga 278
>gb|AF175385.1|AF175385 Chlamydomonas reinhardtii 60S ribosomal protein L10a mRNA, complete cds Length = 688 Score = 46.1 bits (23), Expect = 0.065 Identities = 38/43 (88%) Strand = Plus / Minus Query: 192 acggcaacacccatgcaaagcacctttttcaactggaacttga 234 ||||| || |||||||| |||||||| |||| ||||||||||| Sbjct: 499 acggccacgcccatgcacagcaccttcttcagctggaacttga 457
>gb|BC059454.1| Danio rerio ribosomal protein L10a, mRNA (cDNA clone MGC:73082 IMAGE:4199288), complete cds Length = 746 Score = 44.1 bits (22), Expect = 0.26 Identities = 36/41 (87%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagtt 136 ||||||||||| |||||||||| |||||| || ||||||| Sbjct: 624 acgttttgccagttcttcttcagcagagacaccaggaagtt 584
>ref|XM_691265.1| PREDICTED: Danio rerio similar to Ribosomal protein L10a (LOC567951), mRNA Length = 745 Score = 44.1 bits (22), Expect = 0.26 Identities = 36/41 (87%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagtt 136 ||||||||||| |||||||||| |||||| || ||||||| Sbjct: 647 acgttttgccagttcttcttcagcagagacaccaggaagtt 607
>ref|NM_199636.1| Danio rerio ribosomal protein L10a (rpl10a), mRNA Length = 746 Score = 44.1 bits (22), Expect = 0.26 Identities = 36/41 (87%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagtt 136 ||||||||||| |||||||||| |||||| || ||||||| Sbjct: 624 acgttttgccagttcttcttcagcagagacaccaggaagtt 584
>ref|XM_212679.3| PREDICTED: Rattus norvegicus similar to ribosomal protein L10a (LOC287782), mRNA Length = 1022 Score = 44.1 bits (22), Expect = 0.26 Identities = 43/50 (86%) Strand = Plus / Minus Query: 185 gtggccaacggcaacacccatgcaaagcacctttttcaactggaacttga 234 ||||||||||||||| ||| || |||||||| |||| ||||||||||| Sbjct: 828 gtggccaacggcaacggccagacacagcaccttcttcacctggaacttga 779
>emb|BX005154.6| Zebrafish DNA sequence from clone CH211-288G17 in linkage group 19, complete sequence Length = 164384 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 ctttttcaactggaacttgaca 236 |||||||||||||||||||||| Sbjct: 101104 ctttttcaactggaacttgaca 101083
>gb|BC071510.1| Danio rerio ribosomal protein L10a, mRNA (cDNA clone MGC:86881 IMAGE:6904291), complete cds Length = 774 Score = 44.1 bits (22), Expect = 0.26 Identities = 36/41 (87%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagtt 136 ||||||||||| |||||||||| |||||| || ||||||| Sbjct: 641 acgttttgccagttcttcttcagcagagacaccaggaagtt 601
>emb|CT033109.1| Platynereis dumerilii EST IB0AAA26CC06EM1 Length = 713 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 212 cacctttttcaactggaacttgacagtggccttg 245 ||||||||||| ||||||||||| ||||||||| Sbjct: 493 cacctttttcatctggaacttgatggtggccttg 460
>emb|CT033108.1| Platynereis dumerilii EST IB0AAA26CC06FM1 Length = 713 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 212 cacctttttcaactggaacttgacagtggccttg 245 ||||||||||| ||||||||||| ||||||||| Sbjct: 221 cacctttttcatctggaacttgatggtggccttg 254
>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence Length = 131005 Score = 44.1 bits (22), Expect = 0.26 Identities = 36/41 (87%) Strand = Plus / Plus Query: 96 acgttttgccaattcttcttcaacagagagacanggaagtt 136 ||||||||||| |||||||||| |||||| || ||||||| Sbjct: 126397 acgttttgccagttcttcttcagcagagacaccaggaagtt 126437
>gb|AY392166.1| Scyliorhinus canicula ribosomal protein L10a-like mRNA, partial sequence Length = 553 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 agcacctttttcaactggaacttga 234 ||||||||||||| ||||||||||| Sbjct: 459 agcacctttttcatctggaacttga 435
>ref|XM_451620.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B02002g predicted mRNA Length = 654 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaaca 120 ||||||||||| ||||||||||||| Sbjct: 602 acgttttgccagttcttcttcaaca 578
>ref|XM_447189.1| Candida glabrata CBS138, CAGL0H08976g partial mRNA Length = 654 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaaca 120 ||||||||||| ||||||||||||| Sbjct: 602 acgttttgccagttcttcttcaaca 578
>emb|AM049023.1| Georissus sp. APV-2005 mRNA for ribosomal protein L10Ae (rpL10e gene) Length = 654 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 206 gcaaagcacctttttcaactggaacttga 234 |||||| |||||||||| ||||||||||| Sbjct: 492 gcaaagtacctttttcatctggaacttga 464
>emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on chromosome 1 Contains two novel genes, a elongation factor RNA polymerase II 2 (ELL2) pseudogene, the CD1D gene for CD1D antigen, d polypeptide and a ribosomal protein S10 (RPS10) pseudogene, complete sequence Length = 134137 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 atctgcttctcctccataccc 182 ||||||||||||||||||||| Sbjct: 16597 atctgcttctcctccataccc 16617
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaaca 120 ||||||||||| ||||||||||||| Sbjct: 175843 acgttttgccagttcttcttcaaca 175819
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 acgttttgccaattcttcttcaaca 120 ||||||||||| ||||||||||||| Sbjct: 877269 acgttttgccagttcttcttcaaca 877245
>gb|DQ066323.1| Ixodes scapularis isolate IS-6-12L-22 60S ribosomal protein L10a mRNA, complete cds Length = 654 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 206 gcaaagcacctttttcaactggaacttga 234 |||||||||||| |||| ||||||||||| Sbjct: 492 gcaaagcaccttcttcatctggaacttga 464
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 240 gccttggtctcattaaccttggactcaag 268 ||||| |||||||||||||||| |||||| Sbjct: 8670 gccttagtctcattaaccttggcctcaag 8642
>gb|AY695059.1| Rattus norvegicus A kinase anchoring protein 12 alpha (Akap12) gene, promoter region and exon 1 Length = 5071 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 taaccttggactcaagggactcct 276 ||||||||||||||||||| |||| Sbjct: 1146 taaccttggactcaagggaatcct 1169
>ref|XM_524639.1| PREDICTED: Pan troglodytes LOC469254 (LOC469254), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ttgacagtggccttggtctc 250 |||||||||||||||||||| Sbjct: 203 ttgacagtggccttggtctc 184
>ref|XM_822741.1| Trypanosoma brucei TREU927 60S ribosomal protein L10a (Tb10.05.0220) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 4.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagtt 136 ||||| ||||||||||||| ||| ||| ||||||| Sbjct: 587 tgccagttcttcttcaacaaagacacaaggaagtt 553
>ref|XM_823942.1| Trypanosoma brucei TREU927 60S ribosomal protein L10a (Tb11.01.1470) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 4.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagtt 136 ||||| ||||||||||||| ||| ||| ||||||| Sbjct: 587 tgccagttcttcttcaacaaagacacaaggaagtt 553
>emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 in linkage group 25, complete sequence Length = 163519 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tttttcaactggaacttgac 235 |||||||||||||||||||| Sbjct: 79699 tttttcaactggaacttgac 79680
>gb|AC127226.3| Mus musculus BAC clone RP24-500I10 from chromosome 6, complete sequence Length = 166743 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 aattcttcttcaacagagag 125 |||||||||||||||||||| Sbjct: 105295 aattcttcttcaacagagag 105314
>ref|XM_947712.1| Theileria annulata strain Ankara 60S ribosomal L1/L10a protein (TA09180) partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 4.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 189 ccaacggcaacacccatgcaaagcacctttttcaactggaactt 232 ||||| ||||||||||| ||||| || || || ||||||||||| Sbjct: 422 ccaacagcaacacccatacaaagtactttctttaactggaactt 379
>gb|AC159140.10| Mus musculus chromosome 7, clone RP24-84I4, complete sequence Length = 202318 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 gcaacacccatgcaaagcac 214 |||||||||||||||||||| Sbjct: 22831 gcaacacccatgcaaagcac 22812
>emb|AL671862.6| Human DNA sequence from clone RP11-810H18 on chromosome 1, complete sequence Length = 62080 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ttgacagtggccttggtctc 250 |||||||||||||||||||| Sbjct: 18051 ttgacagtggccttggtctc 18070
>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence Length = 172661 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctcctccatacccaggtggc 189 |||||||||||||||||||| Sbjct: 143007 ctcctccatacccaggtggc 143026
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctcctccatacccaggtggc 189 |||||||||||||||||||| Sbjct: 3851 ctcctccatacccaggtggc 3870
>ref|XM_940320.1| PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC651195), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ttgacagtggccttggtctc 250 |||||||||||||||||||| Sbjct: 587 ttgacagtggccttggtctc 568
>ref|XM_372775.3| PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC391025), mRNA Length = 2745 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ttgacagtggccttggtctc 250 |||||||||||||||||||| Sbjct: 587 ttgacagtggccttggtctc 568
>gb|AC084423.1|AC084423 Caenorhabditis briggsae cosmid CB020D11, complete sequence Length = 85565 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttttgccaattcttcttcaa 118 |||||||||||||||||||| Sbjct: 4577 ttttgccaattcttcttcaa 4596
>emb|AL831718.6| Mouse DNA sequence from clone RP23-146O20 on chromosome X, complete sequence Length = 116076 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 atcctagaagactagagtctagaa 49 ||||||||| |||||||||||||| Sbjct: 86831 atcctagaacactagagtctagaa 86808
>gb|U34620.1|TBU34620 Trypanosoma brucei rhodesiense NEDD-6 like protein mRNA, complete cds Length = 1276 Score = 40.1 bits (20), Expect = 4.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 102 tgccaattcttcttcaacagagagacanggaagtt 136 ||||| ||||||||||||| ||| ||| ||||||| Sbjct: 747 tgccagttcttcttcaacaaagacacaaggaagtt 713 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,600,283 Number of Sequences: 3902068 Number of extensions: 2600283 Number of successful extensions: 49756 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49559 Number of HSP's gapped (non-prelim): 169 length of query: 306 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 284 effective length of database: 17,147,199,772 effective search space: 4869804735248 effective search space used: 4869804735248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
