>ref|XM_470801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 46  tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712

                                      
Query: 106 gntccttnagnctntgtgcangcngct 132
           | ||||| || || || ||| || |||
Sbjct: 711 gctccttgagcctctgggcaagcagct 685

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 46       tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
                ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696

                                           
Query: 106      gntccttnagnctntgtgcangcngct 132
                | ||||| || || || ||| || |||
Sbjct: 15460697 gctccttgagcctctgggcaagcagct 15460723

>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                         
Query: 46    tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
             ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830

                                        
Query: 106   gntccttnagnctntgtgcangcngct 132
             | ||||| || || || ||| || |||
Sbjct: 40829 gctccttgagcctctgggcaagcagct 40803

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 46       tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
                ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230

                                           
Query: 106      gntccttnagnctntgtgcangcngct 132
                | ||||| || || || ||| || |||
Sbjct: 15455231 gctccttgagcctctgggcaagcagct 15455257

>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
           insert sequence
          Length = 1018

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 46  tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710

                                      
Query: 106 gntccttnagnctntgtgcangcngct 132
           | ||||| || || || ||| || |||
Sbjct: 709 gctccttgagcctctgggcaagcagct 683

>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
           insert sequence
          Length = 990

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 46  tggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatccctgt 105
           ||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||||| |
Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709

                                      
Query: 106 gntccttnagnctntgtgcangcngct 132
           | ||||| || || || ||| || |||
Sbjct: 708 gctccttgagcctctgggcaagcagct 682

>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds
          Length = 1023

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 41  agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
           |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 803 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 744

              
Query: 101 cct 103
           |||
Sbjct: 743 cct 741

>gb|AY103674.1| Zea mays PCO104001 mRNA sequence
          Length = 1198

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 41  agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
           |||||||| ||| ||||| ||||| |||||||||||||||| ||||||||| ||||| ||
Sbjct: 931 agccttggcggcggcagaaagcttagacctcctcttggccaagctctcactgcggcggtc 872

              
Query: 101 cct 103
           |||
Sbjct: 871 cct 869

>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds
          Length = 1039

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 41  agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcg 97
           |||||||| ||| ||||| ||||| |||||||||||||||| |||||| ||||||||
Sbjct: 804 agccttggcggcggcagaaagcttggacctcctcttggccaagctctcgctccggcg 748

>ref|NM_189879.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 41  agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
           ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 826 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 767

                       
Query: 101 cctgtgntcctt 112
           ||| || |||||
Sbjct: 766 cctctgctcctt 755

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                            
Query: 41       agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
                ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 25671571 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 25671512

                            
Query: 101      cctgtgntcctt 112
                ||| || |||||
Sbjct: 25671511 cctctgctcctt 25671500

>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                          
Query: 41     agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
              ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 125544 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 125485

                          
Query: 101    cctgtgntcctt 112
              ||| || |||||
Sbjct: 125484 cctctgctcctt 125473

>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
           insert sequence
          Length = 1078

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 41  agccttggtggcagcagacagcttcgacctcctcttggccatgctctcactccggcgatc 100
           ||||||||  |||| ||| ||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 827 agccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccggcgttc 768

                       
Query: 101 cctgtgntcctt 112
           ||| || |||||
Sbjct: 767 cctctgctcctt 756

>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cctcttggccatgctctcac 90
             ||||||||||||||||||||
Sbjct: 82373 cctcttggccatgctctcac 82354

>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence
          Length = 165737

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cctcttggccatgctctcac 90
             ||||||||||||||||||||
Sbjct: 14193 cctcttggccatgctctcac 14212

>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    cctcttggccatgctctca 89
             |||||||||||||||||||
Sbjct: 10641 cctcttggccatgctctca 10659

>emb|AL807770.17| Mouse DNA sequence from clone RP23-206L14 on chromosome 4, complete
             sequence
          Length = 114089

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    tcctcttggccatgctctc 88
             |||||||||||||||||||
Sbjct: 37435 tcctcttggccatgctctc 37453


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 583,475
Number of Sequences: 3902068
Number of extensions: 583475
Number of successful extensions: 45731
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45695
Number of HSP's gapped (non-prelim): 36
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)