ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5j07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 Score = 793 bits (400), Expect = 0.0 Identities = 416/424 (98%) Strand = Plus / Minus Query: 11 tttgaaaccgtaacgtaacacaaactnagacacagatgaacaattcgccactcaagttta 70 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2557 tttgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagttta 2498 Query: 71 caatacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2497 caatacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgcc 2438 Query: 131 gagaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaa 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2437 gagaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaa 2378 Query: 191 acgccggccatggcaacggtgacatcctccttgcaattaaaannnnnnnagagctgctat 250 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2377 acgccggccatggcaacggtgacatcctccttgcaattaaaagggggggagagctgctat 2318 Query: 251 acgagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgacc 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2317 acgagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgacc 2258 Query: 311 atgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcgggg 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2257 atgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcgggg 2198 Query: 371 ttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2197 ttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatc 2138 Query: 431 tcct 434 |||| Sbjct: 2137 tcct 2134
>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene) Length = 2642 Score = 781 bits (394), Expect = 0.0 Identities = 413/422 (97%) Strand = Plus / Minus Query: 13 tgaaaccgtaacgtaacacaaactnagacacagatgaacaattcgccactcaagtttaca 72 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2600 tgaaaccgtaacgtaacacaaactcagacacagatgaacaattcgccactcaagtttaca 2541 Query: 73 atacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgccga 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 atacacactgacaaccgcctcaaaaagccaccgaatcaagggatgagcacatcctgccga 2481 Query: 133 gaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaaac 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 gaaacaactaccctaataaccaacaagtggacacgaggtccagattattcaaagtaaaac 2421 Query: 193 gccggccatggcaacggtgacatcctccttgcaattaaaannnnnnnagagctgctatac 252 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2420 gccggccatggcaacggtgacatcctccttgcaattaaaagggggggagagctgctatac 2361 Query: 253 gagcactgcttactgcgccttggcgagctcggcgcggatctgcttggcggcctcgaccat 312 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2360 gagcactgcttactgcgccttggcgagctcggcgcggatttgcttggcggcctcgaccat 2301 Query: 313 gttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggtt 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2300 gttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggtt 2241 Query: 373 cacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2240 cacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 2181 Query: 433 ct 434 || Sbjct: 2180 ct 2179
>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene) Length = 2675 Score = 210 bits (106), Expect = 3e-51 Identities = 148/162 (91%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||| || |||||||||| || ||||||||||| | Sbjct: 2373 tggcgagctgggtgcggatgagcttggccgcagcgaccatgttagtcagggcgggcttca 2314 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 2313 cctcggtgtacttgcgggtcttgaggccgcagtcagggttcacccagaggatgttggtgt 2254 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2253 cgagcaccgcgagcatcttgttgacgcggtcggcaatctcct 2212
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 26684320 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26684261 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 26684260 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26684201 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 26684200 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 26684159 Score = 182 bits (92), Expect = 6e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 26696168 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26696109 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 26696108 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26696049 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 26696048 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 26696009
>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full insert sequence Length = 2640 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2357 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2298 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2297 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2238 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2237 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 2196
>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full insert sequence Length = 2058 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 1724 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 1665 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 1664 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 1605 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1604 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 1563
>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full insert sequence Length = 2668 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2356 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2297 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2296 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2237 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2236 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 2195
>dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G02, full insert sequence Length = 1064 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 781 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 722 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 721 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 662 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 661 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 620
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 26612489 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26612430 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 26612429 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26612370 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 26612369 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 26612328 Score = 182 bits (92), Expect = 6e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 26624337 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26624278 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 26624277 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26624218 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 26624217 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 26624178
>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 8623 Score = 202 bits (102), Expect = 7e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2904 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2845 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| Sbjct: 2844 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2785 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2784 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcct 2743
>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA sequence Length = 2634 Score = 186 bits (94), Expect = 4e-44 Identities = 145/162 (89%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| ||||||| || | ||||||||||| ||||||||||| | Sbjct: 2364 tggcgagctgggtgcggatgagcttggccgcggcaaccatgttggtcagggcgggcttca 2305 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||| | |||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 2304 cctccgtgtacttgcgggtcttgaggccgcagtcagggttcacccacaggatgttggtgt 2245 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 |||| || |||||||||||||||||||||||||||||||||| Sbjct: 2244 cgaggaccgcgagcatcttgttgacgcggtcggcaatctcct 2203
>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full insert sequence Length = 2783 Score = 182 bits (92), Expect = 6e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 2474 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2415 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2414 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2355 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 2354 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 2315
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 182 bits (92), Expect = 6e-43 Identities = 143/160 (89%) Strand = Plus / Plus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 74959 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 75018 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 75019 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 75078 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 75079 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 75118
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 182 bits (92), Expect = 6e-43 Identities = 143/160 (89%) Strand = Plus / Plus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 102810 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 102869 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 102870 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 102929 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 102930 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 102969
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 180 bits (91), Expect = 2e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 308 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 367 ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| ||||| Sbjct: 72721 accatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtcc 72780 Query: 368 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 427 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 72781 gggttcacccagaggatgttggtgtcaagcacagcaagcatcttgttgacgcggtccgca 72840 Query: 428 atctcct 434 ||||||| Sbjct: 72841 atctcct 72847
>gb|AY109415.1| Zea mays CL598_2 mRNA sequence Length = 3017 Score = 178 bits (90), Expect = 1e-41 Identities = 144/162 (88%) Strand = Plus / Plus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| ||||| |||||||||||| ||||||||||||| Sbjct: 641 tggcgagctgggtgcggatgagcttagcggcggagaccatgttggtcagggcgggcttga 700 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 701 cctccgtgtacttgcgggtcttgaggccgcagtcggggttcacccagaggatgttggtgt 760 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 | ||||| || |||||||||| || ||||||||| ||||||| Sbjct: 761 ccagcaccgccagcatcttgtcgatgcggtcggcgatctcct 802
>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds Length = 2300 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Minus Query: 307 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 366 |||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 2256 gaccatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtc 2197 Query: 367 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 426 ||||||||||||||||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 2196 ggggttcacccagaggatgttggtgtccagcaccgccagcatcttgtcgatgcggtcggc 2137 Query: 427 aatctcct 434 ||||||| Sbjct: 2136 gatctcct 2129
>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full insert sequence Length = 2627 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 275 gcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacc 334 ||||||| || |||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 2355 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2296 Query: 335 tcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcg 394 || | ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 2295 tctgtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2236 Query: 395 agcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||| || ||||||||||||| |||||| |||||||||| Sbjct: 2235 agcaccgcaagcatcttgttgatgcggtccgcaatctcct 2196
>gb|AY111481.1| Zea mays CL598_4 mRNA sequence Length = 664 Score = 174 bits (88), Expect = 2e-40 Identities = 118/128 (92%) Strand = Plus / Plus Query: 307 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 366 |||||||||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||||| Sbjct: 334 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 393 Query: 367 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 426 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 394 agggttcacccagaggatgttggtgtcgagcacggcgagcatcttgttgacgcggtccgc 453 Query: 427 aatctcct 434 ||||||| Sbjct: 454 gatctcct 461
>gb|AY104793.1| Zea mays PCO079166 mRNA sequence Length = 2720 Score = 170 bits (86), Expect = 2e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 |||| |||| || |||||| |||||| |||| |||||||||||| ||||||||||||| Sbjct: 2399 tggcaagctgggtgcggatgagcttggtggccgagaccatgttggtcagggcgggcttga 2340 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||| | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 2339 cctccgtgtacttgcgtgtcttgagaccacagtcagggttcacccagaggatgttggtgt 2280 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 ||||||| ||||||||||| | ||||||||| || ||||||| Sbjct: 2279 cgagcacggcgagcatcttctcgacgcggtctgcgatctcct 2238
>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence Length = 1759 Score = 167 bits (84), Expect = 4e-38 Identities = 117/128 (91%) Strand = Plus / Minus Query: 307 gaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 366 |||||||||||| ||||| ||||| ||||| | ||||||||| ||||||||||||||||| Sbjct: 1359 gaccatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtc 1300 Query: 367 ggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 426 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1299 agggttcacccagaggatgttggtgtccagcacggcgagcatcttgttgacgcggtccgc 1240 Query: 427 aatctcct 434 ||||||| Sbjct: 1239 gatctcct 1232
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25306437 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25306378 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 25306377 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25306318 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 | ||||| || ||||||||||||| |||||| || ||||||| Sbjct: 25306317 caagcacggcaagcatcttgttgatgcggtccgcgatctcct 25306276
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Plus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 136923 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 136982 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 136983 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 137042 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 | ||||| || ||||||||||||| |||||| || ||||||| Sbjct: 137043 caagcacggcaagcatcttgttgatgcggtccgcgatctcct 137084
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25397746 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25397687 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 25397686 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25397627 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 | ||||| || ||||||||||||| |||||| || ||||||| Sbjct: 25397626 caagcacggcaagcatcttgttgatgcggtccgcgatctcct 25397585
>ref|XM_469072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 117 bits (59), Expect = 3e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 332 acctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtg 391 ||||||| ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 944 acctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtg 1003 Query: 392 tcgagcacagcgagcatcttgttgacgcggtcggcaatctcct 434 || ||||| || ||||||||||||| |||||| || ||||||| Sbjct: 1004 tcaagcacggcaagcatcttgttgatgcggtccgcgatctcct 1046
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase Length = 2602 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 338 gcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagc 397 ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||| | | Sbjct: 2272 gcgtacttgcgggtcttgagaccacagtcggggttaacccacaagatgttggtgtccaac 2213 Query: 398 acagcgagcatcttgttgacgcggtcggcaatctcct 434 || || ||||||||||||| | |||||||||||||| Sbjct: 2212 actgcaagcatcttgttgattctgtcggcaatctcct 2176
>gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsive methionine synthase (ER69) mRNA, partial cds Length = 206 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 320 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccag 379 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 171 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcggggttcacccac 112 Query: 380 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 432 | |||||||||||| || || || ||||||||||| || | | |||||||||| Sbjct: 111 aagatgttggtgtcaaggactgcaagcatcttgttaactctgacggcaatctc 59
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds Length = 2644 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 320 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccag 379 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcagggttcacccat 2237 Query: 380 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctc 432 | |||||||||||| || || || ||||||||||| || | ||| |||||||| Sbjct: 2236 aagatgttggtgtcaagaactgcaagcatcttgttaactctgtcagcaatctc 2184
>gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, partial cds Length = 680 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 |||| |||| || |||||| ||||||||||| | |||||||| |||||| ||||| | Sbjct: 646 tggcaagctgggtgcggatttgcttggcggcggcaaccatgttttggagggccggcttca 587 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||| ||||||||||||||||||||||| || || ||||| ||||| | |||||| || | Sbjct: 586 cctcagcgtacttgcgggtcttgagaccacaatcagggttgacccacaagatgttcgtat 527 Query: 393 cgagcacagcgagcatcttgttgacgcggtcggcaatctc 432 | ||||| || ||||||||||| || | ||| |||||||| Sbjct: 526 ccagcactgcaagcatcttgttaactctgtcagcaatctc 487
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine synthase Length = 2795 Score = 93.7 bits (47), Expect = 5e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 326 ggcttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatg 385 ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| | |||| Sbjct: 2412 ggcttcacctcagcgtatttgcgggtcttgagaccacagtcagggttcacccacaagatg 2353 Query: 386 ttggtgtcgagcacagcgagcatcttgttga 416 ||||| || || ||||| ||||||||||||| Sbjct: 2352 ttggtttcaaggacagcaagcatcttgttga 2322
>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds Length = 2682 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2379 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2320 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2319 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2260 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2259 ctaggacagcaagcatcttgttgac 2235
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds Length = 2695 Score = 89.7 bits (45), Expect = 7e-15 Identities = 93/109 (85%) Strand = Plus / Minus Query: 308 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 367 |||||||| |||||||| ||||| ||||| | |||||| ||||||||||| || ||||| Sbjct: 2326 accatgtttgtgagggctggcttcacctcagtgtacttacgggtcttgagcccacagtca 2267 Query: 368 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 416 ||||||||||| | |||||| | |||||||| || ||||||||||||| Sbjct: 2266 gggttcacccacaagatgttcttctcgagcactgccagcatcttgttga 2218
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (At5g17920) mRNA, complete cds Length = 2585 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2372 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2313 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2312 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2253 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2252 ctaggacagcaagcatcttgttgac 2228
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2298 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2287 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2228 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2227 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2168 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2167 ctaggacagcaagcatcttgttgac 2143
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2648 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2594 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms1 gene) Length = 2326 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2292 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagcgcaggcttga 2233 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2232 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2173 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2172 ctaggacagcaagcatcttgttgac 2148
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2613 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2608 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2460 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, complete cds, clone: RAFL22-94-C14 Length = 1684 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 1397 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 1338 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1337 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 1278 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 1277 ctaggacagcaagcatcttgttgac 1253
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2549 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase (MPI7.9) mRNA, complete cds Length = 2646 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 917 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 858 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 857 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 798 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 797 ctaggacagcaagcatcttgttgac 773
>emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 319 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 260 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 259 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 200 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 199 ctaggacagcaagcatcttgttgac 175
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 39733 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 39674 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 39673 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 39614 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 39613 ctaggacagcaagcatcttgttgac 39589
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase (ATCIMS) mRNA, complete cds Length = 2595 Score = 89.7 bits (45), Expect = 7e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 2295 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2236 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2235 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2176 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2175 ctaggacagcaagcatcttgttgac 2151
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence Length = 2295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || |||||| Sbjct: 2284 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttgg 2225 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgt 392 |||||| |||||| |||||||||||||| ||||| ||||| ||||| |||||||| | Sbjct: 2224 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2165 Query: 393 cgagcacagcgagcatcttgttgac 417 | || ||||| |||||||||||||| Sbjct: 2164 ctaggacagcaagcatcttgttgac 2140
>dbj|AK221003.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-65-M04 Length = 390 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 273 tggcgagctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttga 332 ||||||||| || |||||| |||| || || || |||||||| |||| || ||||||| Sbjct: 103 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 44 Query: 333 cctcggcgtacttgcgggtcttgagaccgcagtcggggtt 372 |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 43 cctcggtgtacttacgggtcttgagaccacagtcagggtt 4
>ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 295 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 354 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 355 gagaccgcagtcggggttcacccagag 381 ||||||||||||||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 295 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 354 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 355 gagaccgcagtcggggttcacccagag 381 ||||||||||||||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (met-8) gene, complete cds Length = 3269 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 295 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 354 |||||||||||| ||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2643 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2584 Query: 355 gagaccgcagtcggggttcacccagag 381 ||||||||||||||||| | |||||| Sbjct: 2583 aagaccgcagtcggggttgatccagag 2557
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA, complete cds Length = 2734 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 329 ttgacctcggcgtacttgcgggtcttgagaccgcagtcggggttcaccca 378 |||||||| ||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2351 ttgacctcaccgtacttacgggtcttgagaccacagtcggggttcaccca 2302
>emb|AM158915.1| Plantago major partial mRNA for methionine synthase (met1 gene) Length = 772 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 349 ggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcacagcgagcat 408 |||||| ||||| ||||| ||||| ||||| || |||||||| |||||||| || ||||| Sbjct: 400 ggtcttcagaccacagtcagggttgacccatagaatgttggtctcgagcacggcaagcat 341 Query: 409 cttgtt 414 |||||| Sbjct: 340 cttgtt 335
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 344 ttgcgggtcttgagaccgcagtcggggttcaccca 378 |||||||||||||| |||||||||||||| ||||| Sbjct: 2998441 ttgcgggtcttgagcccgcagtcggggttgaccca 2998407 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 cgccttggcgagctcggcgcg 288 ||||||||||||||||||||| Sbjct: 384455 cgccttggcgagctcggcgcg 384475
>ref|XM_751988.1| Ustilago maydis 521 hypothetical protein (UM00934.1) partial mRNA Length = 2304 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggttcacccaga 380 |||||||||||||| ||||||||||| ||||||| Sbjct: 2228 cgggtcttgagaccacagtcggggttgacccaga 2195
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 350 gtcttgagaccgcagtcggggttcaccca 378 ||||||||||||||||| ||||||||||| Sbjct: 1027924 gtcttgagaccgcagtccgggttcaccca 1027896
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 346 gcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||| ||||||||||||||||| ||||| Sbjct: 136480 gcgggtcttcagaccgcagtcggggttgaccca 136448
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gcgggtcttgagaccgcagtcggggttcaccca 378 |||||||||||| |||||||||||||| ||||| Sbjct: 3542175 gcgggtcttgaggccgcagtcggggttgaccca 3542207 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 299 gcggcctcgaccatgttggtgagggcgg 326 ||||||||||||||||||| |||||||| Sbjct: 3542128 gcggcctcgaccatgttggcgagggcgg 3542155
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 346 gcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||| ||||||||||||||||| ||||| Sbjct: 2498626 gcgggtcttcagaccgcagtcggggttgaccca 2498594
>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene cluster, downstream region Length = 10029 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 346 gcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||| || |||||||||||||||||||| Sbjct: 6613 gcgggtcttcaggccgcagtcggggttcaccca 6645
>ref|NM_122107.2| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G20980 mRNA, complete cds Length = 2728 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Minus Query: 362 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 416 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2348 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2294
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 344 ttgcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||||| || |||||||||||||| ||||| Sbjct: 1258681 ttgcgggtcttcagtccgcagtcggggttgaccca 1258715
>gb|AY662341.1| Medicago sativa methionine synthase mRNA, partial cds Length = 552 Score = 46.1 bits (23), Expect = 0.095 Identities = 77/95 (81%) Strand = Plus / Minus Query: 340 gtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcac 399 ||||||||||||||| || || ||||| ||||| ||||| | ||||| | || || || Sbjct: 549 gtacttgcgggtctttagcccacagtcagggttgacccacaaaatgttcttctcaaggac 490 Query: 400 agcgagcatcttgttgacgcggtcggcaatctcct 434 ||| ||||||||||||| | |||||| ||||||| Sbjct: 489 agcaagcatcttgttgatcctgtcggcgatctcct 455
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 46.1 bits (23), Expect = 0.095 Identities = 59/71 (83%) Strand = Plus / Minus Query: 308 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcg 367 ||||| |||||||| ||||| |||||||||| | | ||||||||| | ||||||||| Sbjct: 2773099 accatattggtgagcgcggggatgacctcggcccattggcgggtcttcaagccgcagtcg 2773040 Query: 368 gggttcaccca 378 || |||||||| Sbjct: 2773039 ggattcaccca 2773029
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 344 ttgcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||||| || |||||||||||||| ||||| Sbjct: 225347 ttgcgggtcttcagtccgcagtcggggttgaccca 225381
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 344 ttgcgggtcttgagaccgcagtcggggttcaccca 378 ||||||||||| || |||||||||||||| ||||| Sbjct: 273505 ttgcgggtcttcagtccgcagtcggggttgaccca 273539
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggttcacccagag 381 |||||||||||||||||||| ||||| | |||||| Sbjct: 2186998 cgggtcttgagaccgcagtcagggttgatccagag 2186964
>emb|AJ608675.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms3 gene) Length = 2464 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Minus Query: 362 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 416 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2343 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2289
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Plus Query: 362 cagtcggggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 416 ||||| ||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 68186 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 68240
>dbj|AK107388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C09, full insert sequence Length = 2566 Score = 46.1 bits (23), Expect = 0.095 Identities = 71/87 (81%) Strand = Plus / Minus Query: 295 cttggcggcctcgaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 354 ||||||||| | ||||| |||||||||||||| |||| ||| ||| ||||||||| Sbjct: 2337 cttggcggcgttgaccaagttggtgagggcggtcttggtctccttccactggcgggtctt 2278 Query: 355 gagaccgcagtcggggttcacccagag 381 ||||||||| || ||||| | |||||| Sbjct: 2277 gagaccgcaatcagggttgatccagag 2251
>ref|NM_208514.1| Eremothecium gossypii ABR212Cp (ABR212C), mRNA Length = 2307 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Minus Query: 293 tgcttggcggcctcgaccatgttggtgaggg 323 ||||||||||| ||||||||||| ||||||| Sbjct: 2276 tgcttggcggcttcgaccatgtttgtgaggg 2246
>gb|U36197.1|CRU36197 Chlamydomonas reinhardtii cobalamin-independent methionine synthase mRNA, complete cds Length = 2927 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Minus Query: 350 gtcttgagaccgcagtcggggttcacccaga 380 |||||||| |||||||||||||| ||||||| Sbjct: 2355 gtcttgaggccgcagtcggggttgacccaga 2325
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 293 tgcttggcggcctcgaccatgttggtgaggg 323 ||||||||||| ||||||||||| ||||||| Sbjct: 802422 tgcttggcggcttcgaccatgtttgtgaggg 802452
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggtt 372 |||||||||||||| ||||||||||| Sbjct: 674963 cgggtcttgagaccacagtcggggtt 674938
>ref|XM_567704.1| Cryptococcus neoformans var. neoformans JEC21 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (CNK02310) partial mRNA Length = 2623 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggtt 372 |||||||||||||| ||||||||||| Sbjct: 2252 cgggtcttgagaccacagtcggggtt 2227
>gb|BC034830.1| Mus musculus cDNA clone MGC:28753 IMAGE:4483004, complete cds Length = 2755 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 341 tacttgcgggtcttgagaccgcagtcggggttcaccca 378 ||||| |||||||||||||| || || ||||||||||| Sbjct: 2357 tacttacgggtcttgagaccacaatcagggttcaccca 2320
>gb|BC032196.1| Mus musculus cDNA clone MGC:38244 IMAGE:5324059, complete cds Length = 2766 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 341 tacttgcgggtcttgagaccgcagtcggggttcaccca 378 ||||| |||||||||||||| || || ||||||||||| Sbjct: 2368 tacttacgggtcttgagaccacaatcagggttcaccca 2331
>emb|AL672113.1|MLO672113 Mesorhizobium loti R7A symbiosis island; segment 2/4 Length = 152050 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 353 ttgagaccgcagtcggggttcaccca 378 ||||||||||||||||| |||||||| Sbjct: 45699 ttgagaccgcagtcgggattcaccca 45674
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 353 ttgagaccgcagtcggggttcaccca 378 ||||||||||||||||| |||||||| Sbjct: 4954785 ttgagaccgcagtcgggattcaccca 4954810
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 atctgcttggcggcctcgacc 310 ||||||||||||||||||||| Sbjct: 428585 atctgcttggcggcctcgacc 428565
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 atctgcttggcggcctcgacc 310 ||||||||||||||||||||| Sbjct: 3276151 atctgcttggcggcctcgacc 3276131
>gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, complete sequence Length = 196843 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ccagattattcaaagtaaaac 192 ||||||||||||||||||||| Sbjct: 160771 ccagattattcaaagtaaaac 160791
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 gcgggtcttgagaccgcagtcggggttcaccca 378 |||||||||||| |||||||| ||||| ||||| Sbjct: 4708286 gcgggtcttgaggccgcagtccgggttgaccca 4708318
>emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on chromosome 10 Contains part of the PARD3 gene for par-3 partitioning defective 3 homolog (C.elegans), complete sequence Length = 193131 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ccagattattcaaagtaaaac 192 ||||||||||||||||||||| Sbjct: 157149 ccagattattcaaagtaaaac 157169
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 atctgcttggcggcctcgacc 310 ||||||||||||||||||||| Sbjct: 3007326 atctgcttggcggcctcgacc 3007306
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 ggcgcggatctgcttggcggcctcg 307 ||||||||||| ||||||||||||| Sbjct: 7030 ggcgcggatctccttggcggcctcg 7006
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gatctgcttggcggcctcgaccatg 313 ||||||||||||||| ||||||||| Sbjct: 4608560 gatctgcttggcggcttcgaccatg 4608536
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcttgagaccgcagtcggggt 371 ||||||||||||||||||||| Sbjct: 1287116 tcttgagaccgcagtcggggt 1287136
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 gtcttgagaccgcagtcggggttcaccca 378 |||||||| |||||||||||||| ||||| Sbjct: 1601527 gtcttgaggccgcagtcggggttgaccca 1601499
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 atcttgttgacgcggtcggcaatc 430 |||||||||||||||||| ||||| Sbjct: 2475457 atcttgttgacgcggtcgccaatc 2475480
>ref|XM_659310.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6798.2), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cgagcacagcgagcatcttg 412 |||||||||||||||||||| Sbjct: 811 cgagcacagcgagcatcttg 792
>gb|AY502077.1| Venturia inaequalis microsatellite TG9/129 sequence Length = 542 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 gcgggtcttgagaccgcagtcggggttcacccagag 381 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 53 gcgggtcttgagaccacagtctgggttgatccagag 18
>emb|Z94723.1|MLCB33 Mycobacterium leprae cosmid B33 Length = 42224 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggttcaccca 378 |||||||| || |||||||||||||| ||||| Sbjct: 25598 cgggtcttcagcccgcagtcggggttaaccca 25567
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cgccttggcgagctcggcgcggat 291 ||||||||||||||||| |||||| Sbjct: 61299 cgccttggcgagctcggggcggat 61276
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cgccttggcgagctcggcgcggat 291 ||||||||||||||||| |||||| Sbjct: 344059 cgccttggcgagctcggggcggat 344036
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 cgccttggcgagctcggcgcggat 291 ||||||||||||||||| |||||| Sbjct: 134631 cgccttggcgagctcggggcggat 134654
>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10 Length = 348450 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 347 cgggtcttgagaccgcagtcggggttcaccca 378 |||||||| || |||||||||||||| ||||| Sbjct: 127850 cgggtcttcagcccgcagtcggggttaaccca 127881
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cttggcggcctcgaccatgt 314 |||||||||||||||||||| Sbjct: 528455 cttggcggcctcgaccatgt 528436
>gb|AF226997.1| Cladosporium fulvum methionine synthase gene, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 346 gcgggtcttgagaccgcagtcggggttcacccagag 381 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 2232 gcgggtcttgagaccacagtctgggttgatccagag 2197
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 atgaacaattcgccactcaa 65 |||||||||||||||||||| Sbjct: 41912770 atgaacaattcgccactcaa 41912751
>dbj|AB221011.1| Beta vulgaris BvMS1 mRNA for methionine synthase, complete cds Length = 2720 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgggtcttgagaccgcagtcggggttcaccca 378 |||||||||||||| || || ||||||||||| Sbjct: 2305 cgggtcttgagaccacaatcagggttcaccca 2274
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 atgaacaattcgccactcaa 65 |||||||||||||||||||| Sbjct: 14847 atgaacaattcgccactcaa 14828
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 347 cgggtcttgagaccgcagtcggggttcaccca 378 |||||||| ||||||||||| ||||| ||||| Sbjct: 1265044 cgggtcttcagaccgcagtccgggttgaccca 1265075
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gtcttgagaccgcagtcggg 369 |||||||||||||||||||| Sbjct: 1313139 gtcttgagaccgcagtcggg 1313158
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gggcgggcttgacctcggcgtact 344 |||||| ||||||||||||||||| Sbjct: 1408386 gggcggccttgacctcggcgtact 1408363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,635,816 Number of Sequences: 3902068 Number of extensions: 2635816 Number of successful extensions: 46259 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 45245 Number of HSP's gapped (non-prelim): 995 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
