ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5j05 |
|---|---|
| Clone Library Name | barley_pub |
>RENR_MOUSE (Q9CYN9) Renin receptor precursor (Renin/prorenin receptor)| (ATPase, H+-transporting, lysosomal accessory protein 2) (ATPase, H+-transporting, lysosomal-interacting protein 2) Length = 350 Score = 37.0 bits (84), Expect = 0.051 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Frame = -1 Query: 638 ELLVCQFTGIKALEDEYGS-AEIVKQGAEVVRTALTKAFDQLQGVYNGKIVGLVMSTKEA 462 +L + G+ L YG +E + ++++ AL K D + +Y G V +++ K Sbjct: 211 DLYSLELAGLDELGKRYGEDSEQFRDASKILVDALQKFADDMYSLYGGNAVVELVTVKSF 270 Query: 461 STSLSSIIDGPSSLHISRRLAEASRTNATASIAAIYLVRLSLAWITGIILLVSTLIGICL 282 TSL + SR + EA + N + Y L + + ++L + +IG+ L Sbjct: 271 DTSL---------VRKSRTILEAKQENTQSPYNLAYKYNLEYSVVFNLVLWI--MIGLAL 319 Query: 281 --------LMNMPLTRDTLLY--SNVKI 228 + NM D+++Y +N KI Sbjct: 320 AVIITSYNIWNMDPGYDSIIYRMTNQKI 347
>RENR_RAT (Q6AXS4) Renin receptor precursor (Renin/prorenin receptor)| (ATPase, H+-transporting, lysosomal accessory protein 2) (ATPase, H+-transporting, lysosomal-interacting protein 2) Length = 350 Score = 36.6 bits (83), Expect = 0.067 Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 9/146 (6%) Frame = -1 Query: 638 ELLVCQFTGIKALEDEYGS-AEIVKQGAEVVRTALTKAFDQLQGVYNGKIVGLVMSTKEA 462 +L + G+ L YG +E + + ++ AL K D + +Y G V +++ K Sbjct: 211 DLYSLELAGLDELGKRYGEDSEQFRDASRILVDALQKFADDMYSLYGGNAVVELVTVKSF 270 Query: 461 STSLSSIIDGPSSLHISRRLAEASRTNATASIAAIYLVRLSLAWITGIILLVSTLIGICL 282 TSL + SR + E + N + Y L + + ++L + T + + + Sbjct: 271 DTSL---------VRKSRTILETKQENTQSPYNLAYKYNLEYSVVFNLVLWIMTGLALAV 321 Query: 281 LM------NMPLTRDTLLY--SNVKI 228 ++ NM D+++Y +N KI Sbjct: 322 IITSYNIWNMDPGYDSIIYRMTNQKI 347
>COX1_YARLI (Q9B6E7) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 535 Score = 32.3 bits (72), Expect = 1.3 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 4/119 (3%) Frame = -1 Query: 491 VGLVMSTKEASTSLSSIIDGPSSLHISRRLAE----ASRTNATASIAAIYLVRLSLAWIT 324 VGL T+ TS + +I P+S+ I LA R N TA A ++ ++ +T Sbjct: 300 VGLDSDTRAYFTSATMVIAVPTSIKIFSWLATLYGGTIRLNVTALFALGFIFLFTIGGLT 359 Query: 323 GIILLVSTLIGICLLMNMPLTRDTLLYSNVKID*FVLHMNFHTTAWKFLTVMLGFFLWT 147 G++L S L D + + + V H ++ + ++ G++LW+ Sbjct: 360 GVVLANSAL-------------DIPFHDSYYV---VAHFHYVLSMGAVFSIFCGWYLWS 402
>RENR_PONPY (Q5R563) Renin receptor precursor (Renin/prorenin receptor)| (ATPase, H+-transporting, lysosomal accessory protein 2) (ATPase, H+-transporting, lysosomal-interacting protein 2) Length = 350 Score = 31.2 bits (69), Expect = 2.8 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Frame = -1 Query: 638 ELLVCQFTGIKALEDEYGS-AEIVKQGAEVVRTALTKAFDQLQGVYNGKIVGLVMSTKEA 462 +L + G+ + YG +E + ++++ AL K D + +Y G V +++ K Sbjct: 210 DLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQKFADDMYSLYGGNAVVELVTVKSF 269 Query: 461 STSLSSIIDGPSSLHISRRLAEASRTNATAS---IAAIYLVRLSLA-----WITGIILLV 306 TSL + +R + EA + AS +A Y S+ WI I L + Sbjct: 270 DTSL---------IRKTRTILEAKQAKNPASPYNLAYKYNFEYSVVFNMVLWIM-IALAL 319 Query: 305 STLIGICLLMNMPLTRDTLLY--SNVKI 228 + +I + NM D+++Y +N KI Sbjct: 320 AVIITSYNIWNMDPGYDSIIYRMTNQKI 347
>RENR_HUMAN (O75787) Renin receptor precursor (Renin/prorenin receptor)| (ATPase, H+-transporting, lysosomal accessory protein 2) (ATPase, H+-transporting, lysosomal-interacting protein 2) (Vacuolar ATP synthase membrane sector-associated protein M8-9) (V- Length = 350 Score = 31.2 bits (69), Expect = 2.8 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Frame = -1 Query: 638 ELLVCQFTGIKALEDEYGS-AEIVKQGAEVVRTALTKAFDQLQGVYNGKIVGLVMSTKEA 462 +L + G+ + YG +E + ++++ AL K D + +Y G V +++ K Sbjct: 210 DLYSLELAGLDEIGKRYGEDSEQFRDASKILVDALQKFADDMYSLYGGNAVVELVTVKSF 269 Query: 461 STSLSSIIDGPSSLHISRRLAEASRTNATAS---IAAIYLVRLSLA-----WITGIILLV 306 TSL + +R + EA + AS +A Y S+ WI I L + Sbjct: 270 DTSL---------IRKTRTILEAKQAKNPASPYNLAYKYNFEYSVVFNMVLWIM-IALAL 319 Query: 305 STLIGICLLMNMPLTRDTLLY--SNVKI 228 + +I + NM D+++Y +N KI Sbjct: 320 AVIITSYNIWNMDPGYDSIIYRMTNQKI 347
>Y2912_DESPS (Q6AJ39) UPF0316 protein DP2912| Length = 318 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +1 Query: 238 FEYRSVSLVSGMFMSRQIPMSVETRRMIPVIHARLSLTRYIAAIEA 375 FE S+ + +F+SR + +S T R I ++H R ++ ++ EA Sbjct: 37 FEPASLLYAAMVFLSRVVDVSFGTLRTISIVHGRTTMAFWLGFFEA 82
>HOS3_YEAST (Q02959) Histone deacetylase HOS3| Length = 697 Score = 29.6 bits (65), Expect = 8.2 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = -1 Query: 644 PAELL-VCQFTGIKALEDEYGSAEIVKQGAEVVRTALTKAFDQLQGVYNGKIVGLVMSTK 468 PAEL+ +CQ K L+ E + G + + KA LQG +G + Sbjct: 119 PAELIELCQMADAKLLKGEIEVPDTWNSGDIYLSSKTIKA---LQGT-----IGAI---- 166 Query: 467 EASTSLSSIIDGPSSLHISRRLAEASR 387 T + SI GPS+ HIS R A R Sbjct: 167 --ETGVDSIFKGPSAEHISNRAFVAIR 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,550,199 Number of Sequences: 219361 Number of extensions: 1781647 Number of successful extensions: 5025 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4799 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5025 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
