ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5j05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483854.1| Oryza sativa (japonica cultivar-group), mRNA 188 2e-44
2dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 2e-44
3gb|AY103941.1| Zea mays PCO095480 mRNA sequence 139 1e-29
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
5dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
6gb|AY152828.1| Felis catus clone PAC f20 major histocompatiblity... 46 0.14
7gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli... 46 0.14
8gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete s... 46 0.14
9gb|AY463013.1| Musa acuminata putative membrane protein type I m... 42 2.3
10gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome... 42 2.3
11gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complet... 42 2.3
12gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 42 2.3
13gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, co... 42 2.3
14gb|BC081116.1| Xenopus laevis hypothetical protein LOC446934, mR... 40 8.9
15gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, co... 40 8.9
16gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosom... 40 8.9
17gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, co... 40 8.9
18emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chr... 40 8.9
19emb|AL109823.23|HS1057B20 Human DNA sequence from clone RP5-1057... 40 8.9
20emb|AL645788.6| Zebrafish DNA sequence from clone BUSM1-17K08 Co... 40 8.9
21gb|AC009365.9|AC009365 Homo sapiens chromosome 7 clone RP11-355K... 40 8.9
22emb|BX537347.12| Zebrafish DNA sequence from clone RP71-78P1 in ... 40 8.9
23gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complet... 40 8.9
24gb|BC084294.1| Xenopus laevis hypothetical LOC495257, mRNA (cDNA... 40 8.9
25emb|AL139023.6|CNS01DX5 Human chromosome 14 DNA sequence BAC R-2... 40 8.9 
>ref|XM_483854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1538

 Score =  188 bits (95), Expect = 2e-44
 Identities = 173/199 (86%)
 Strand = Plus / Minus

                                                                        
Query: 451  aaggatgttgaagcctccttggtggacattactagcccaacaattttcccgttatatact 510
            ||||||| |||||||||||| ||||| ||||||| |||||||||||| || |||||| ||
Sbjct: 1102 aaggatggtgaagcctcctttgtggatattactaacccaacaatttttccattatatgct 1043

                                                                        
Query: 511  ccctgcagttgatcaaatgctttggtgagagctgtcctaactacttcagctccctgctta 570
            ||  | |||  ||||||||||||||||| ||||||||  ||||| |||| ||||||||||
Sbjct: 1042 ccacgtagtaaatcaaatgctttggtgacagctgtccggactacatcagttccctgctta 983

                                                                        
Query: 571  acaatttctgcagagccatattcatcttccagagccttaatgcccgtgaactggcaaact 630
            ||||||||||  || |||||||| ||||||| ||||||||||||  |||| ||||| |||
Sbjct: 982  acaatttctgtggaaccatattcttcttccaaagccttaatgcctttgaagtggcatact 923

                               
Query: 631  aataactctgcagggctca 649
            |||||||||||||||||||
Sbjct: 922  aataactctgcagggctca 904



 Score =  135 bits (68), Expect = 2e-28
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 222  ctaatcaatcttgacattcgaatataggagtgtgtccctggtaagcggcatgttcatgag 281
            |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct: 1319 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 1260

                                                                        
Query: 282  caggcaaatcccaatgagcgttgagacaagaaggatgatccctgtaatccatgcaagact 341
            || ||||| ||||||||| || ||||||||||| |||||||||||||||||||| | |||
Sbjct: 1259 caagcaaaccccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaact 1200

                        
Query: 342  cagtctaacaag 353
            |  |||||||||
Sbjct: 1199 ctttctaacaag 1188
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>dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D24, full
            insert sequence
          Length = 1538

 Score =  188 bits (95), Expect = 2e-44
 Identities = 173/199 (86%)
 Strand = Plus / Minus

                                                                        
Query: 451  aaggatgttgaagcctccttggtggacattactagcccaacaattttcccgttatatact 510
            ||||||| |||||||||||| ||||| ||||||| |||||||||||| || |||||| ||
Sbjct: 1102 aaggatggtgaagcctcctttgtggatattactaacccaacaatttttccattatatgct 1043

                                                                        
Query: 511  ccctgcagttgatcaaatgctttggtgagagctgtcctaactacttcagctccctgctta 570
            ||  | |||  ||||||||||||||||| ||||||||  ||||| |||| ||||||||||
Sbjct: 1042 ccacgtagtaaatcaaatgctttggtgacagctgtccggactacatcagttccctgctta 983

                                                                        
Query: 571  acaatttctgcagagccatattcatcttccagagccttaatgcccgtgaactggcaaact 630
            ||||||||||  || |||||||| ||||||| ||||||||||||  |||| ||||| |||
Sbjct: 982  acaatttctgtggaaccatattcttcttccaaagccttaatgcctttgaagtggcatact 923

                               
Query: 631  aataactctgcagggctca 649
            |||||||||||||||||||
Sbjct: 922  aataactctgcagggctca 904



 Score =  135 bits (68), Expect = 2e-28
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 222  ctaatcaatcttgacattcgaatataggagtgtgtccctggtaagcggcatgttcatgag 281
            |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct: 1319 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 1260

                                                                        
Query: 282  caggcaaatcccaatgagcgttgagacaagaaggatgatccctgtaatccatgcaagact 341
            || ||||| ||||||||| || ||||||||||| |||||||||||||||||||| | |||
Sbjct: 1259 caagcaaaccccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaact 1200

                        
Query: 342  cagtctaacaag 353
            |  |||||||||
Sbjct: 1199 ctttctaacaag 1188
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>gb|AY103941.1| Zea mays PCO095480 mRNA sequence
          Length = 1596

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                        
Query: 218  caaactaatcaatcttgacattcgaatataggagtgtgtccctggtaagcggcatgttca 277
            |||||||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1230 caaactaatcgatcttgacattcgagtacaggagggtgtccctggtaagtggcatgttca 1171

                                                                      
Query: 278  tgagcaggcaaatcccaatgagcgttgagacaagaaggatgatccctgtaatccatgc 335
            | |||| ||||| ||| ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 1170 taagcaagcaaacccctatgagagttgaaacaagcaggatgatccctgtaatccatgc 1113



 Score =  103 bits (52), Expect = 7e-19
 Identities = 208/260 (80%)
 Strand = Plus / Minus

                                                                        
Query: 393  tgcttctgcaagccgtcttgagatgtgcaatgaagagggtccatcgatgatggatgacaa 452
            ||||||| | ||||||||||| ||||||| |||||| ||| | || || ||||||   ||
Sbjct: 1064 tgcttcttctagccgtcttgaaatgtgcagtgaagatggtgcgtcaattatggatcctaa 1005

                                                                        
Query: 453  ggatgttgaagcctccttggtggacattactagcccaacaattttcccgttatatactcc 512
            ||||| || |||||| || ||||| ||||| ||||||||||||||||| || ||| || |
Sbjct: 1004 ggatgatggagcctcatttgtggatattaccagcccaacaattttccctttgtatgcttc 945

                                                                        
Query: 513  ctgcagttgatcaaatgctttggtgagagctgtcctaactacttcagctccctgcttaac 572
             || ||    |  |||| |||||||| |||| ||  ||||| ||| | ||||||||||||
Sbjct: 944  atgtagggactggaatgatttggtgacagctctctgaactatttctgttccctgcttaac 885

                                                                        
Query: 573  aatttctgcagagccatattcatcttccagagccttaatgcccgtgaactggcaaactaa 632
            ||||||  |||| ||||||||||  ||||||||||| |  || ||||| || ||  ||||
Sbjct: 884  aatttcaccagaaccatattcattctccagagccttcaaccctgtgaagtgacattctaa 825

                                
Query: 633  taactctgcagggctcacga 652
            ||||||||||||| ||||||
Sbjct: 824  taactctgcagggttcacga 805
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 522      atcaaatgctttggtgagagctgtcctaactacttcagctccctgcttaacaatttctgc 581
                ||||||||||||||||| ||||||||  ||||| |||| |||||||||||||||||||| 
Sbjct: 28390792 atcaaatgctttggtgacagctgtccggactacatcagttccctgcttaacaatttctgt 28390733

                                          
Query: 582      agagccatattcatcttccagagcct 607
                 || |||||||| ||||||| |||||
Sbjct: 28390732 ggaaccatattcttcttccaaagcct 28390707



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 222      ctaatcaatcttgacattcgaatataggagtgtgtccctggtaagcggcatgttcatgag 281
                |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct: 28391589 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 28391530

                        
Query: 282      caggcaaa 289
                || |||||
Sbjct: 28391529 caagcaaa 28391522



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 291      cccaatgagcgttgagacaagaaggatgatccctgtaatccatgcaagactcagtctaac 350
                ||||||||| || ||||||||||| |||||||||||||||||||| | ||||  ||||||
Sbjct: 28391396 cccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaactctttctaac 28391337

                   
Query: 351      aag 353
                |||
Sbjct: 28391336 aag 28391334



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 451      aaggatgttgaagcctccttggtggacattactagcccaacaatttt 497
                ||||||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 28391248 aaggatggtgaagcctcctttgtggatattactaacccaacaatttt 28391202



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 605      ccttaatgcccgtgaactggcaaactaataactctgcagggctca 649
                ||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 28390527 ccttaatgcctttgaagtggcatactaataactctgcagggctca 28390483
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                          
Query: 522    atcaaatgctttggtgagagctgtcctaactacttcagctccctgcttaacaatttctgc 581
              ||||||||||||||||| ||||||||  ||||| |||| |||||||||||||||||||| 
Sbjct: 119598 atcaaatgctttggtgacagctgtccggactacatcagttccctgcttaacaatttctgt 119539

                                        
Query: 582    agagccatattcatcttccagagcct 607
               || |||||||| ||||||| |||||
Sbjct: 119538 ggaaccatattcttcttccaaagcct 119513



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                          
Query: 222    ctaatcaatcttgacattcgaatataggagtgtgtccctggtaagcggcatgttcatgag 281
              |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct: 120395 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 120336

                      
Query: 282    caggcaaa 289
              || |||||
Sbjct: 120335 caagcaaa 120328



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                          
Query: 291    cccaatgagcgttgagacaagaaggatgatccctgtaatccatgcaagactcagtctaac 350
              ||||||||| || ||||||||||| |||||||||||||||||||| | ||||  ||||||
Sbjct: 120202 cccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaactctttctaac 120143

                 
Query: 351    aag 353
              |||
Sbjct: 120142 aag 120140



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 451    aaggatgttgaagcctccttggtggacattactagcccaacaatttt 497
              ||||||| |||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 120054 aaggatggtgaagcctcctttgtggatattactaacccaacaatttt 120008



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 605    ccttaatgcccgtgaactggcaaactaataactctgcagggctca 649
              ||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 119333 ccttaatgcctttgaagtggcatactaataactctgcagggctca 119289
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>gb|AY152828.1| Felis catus clone PAC f20 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 87684

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 127   tccctactgttaaaccccagggt 149
             |||||||||||||||||||||||
Sbjct: 30987 tccctactgttaaaccccagggt 31009
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>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended and
              classical class II region, partial sequence
          Length = 132445

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 127    tccctactgttaaaccccagggt 149
              |||||||||||||||||||||||
Sbjct: 130135 tccctactgttaaaccccagggt 130157
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>gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete sequence
          Length = 132320

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 222  ctaatcaatcttgacattcgaatataggagtgtgtccct 260
            |||||||| ||||||||| ||||| || |||||||||||
Sbjct: 4941 ctaatcaagcttgacattagaatagagaagtgtgtccct 4979
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>gb|AY463013.1| Musa acuminata putative membrane protein type I mRNA, partial cds
          Length = 534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 231 cttgacattcgaatataggagtgtgtccctggtaagcggcatgtt 275
           ||||||||| ||||| || || |||||||| || |||||||||||
Sbjct: 325 cttgacattggaataaagaagggtgtcccttgtcagcggcatgtt 281
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>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence
          Length = 159112

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   gaaaattcatatgcagcacaa 220
             |||||||||||||||||||||
Sbjct: 13729 gaaaattcatatgcagcacaa 13749
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>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence
          Length = 170536

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    aaaattcatatgcagcacaaa 221
              |||||||||||||||||||||
Sbjct: 108900 aaaattcatatgcagcacaaa 108920
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 322     cctgtaatccatgcaagactc 342
               |||||||||||||||||||||
Sbjct: 2576573 cctgtaatccatgcaagactc 2576553
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>gb|AC099712.21| Mus musculus chromosome 1, clone RP23-400C10, complete sequence
          Length = 196059

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      ttatttatttacggaaaagcagaga 25
              |||||||||||||| ||||||||||
Sbjct: 118958 ttatttatttacggtaaagcagaga 118934
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>gb|BC081116.1| Xenopus laevis hypothetical protein LOC446934, mRNA (cDNA clone
            IMAGE:5079098), partial cds
          Length = 3373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 467  ccttggtggacattactagc 486
            ||||||||||||||||||||
Sbjct: 2636 ccttggtggacattactagc 2655
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>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence
          Length = 188921

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tcagctccctgcttaacaat 575
             ||||||||||||||||||||
Sbjct: 20968 tcagctccctgcttaacaat 20949
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>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence
          Length = 198030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 556    tcagctccctgcttaacaat 575
              ||||||||||||||||||||
Sbjct: 133789 tcagctccctgcttaacaat 133770
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>gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, complete sequence
          Length = 247892

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     atgtttatgctacacagggt 103
              ||||||||||||||||||||
Sbjct: 124751 atgtttatgctacacagggt 124770
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>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a
             fem-1 homolog a (C. elegans) (FEM1A) pseudogene, a keratin
             18 (KRT18) pseudogene, a laminin receptor 1 (67kD,
             ribosomal protein SA) (LAMR1)(RPSA) pseudogene, a
             hepatocellular carcinoma-related putative tumor suppressor
             (LPTS) pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   aattcatatgcagcacaaac 222
             ||||||||||||||||||||
Sbjct: 99716 aattcatatgcagcacaaac 99735
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>emb|AL109823.23|HS1057B20 Human DNA sequence from clone RP5-1057B20 on chromosome 20q11.21-12
             Contains part of the gene for KIAA0406 protein, the gene
             for a novel protein similar to D. melanogaster CG9018
             protein and a CpG island, complete sequence
          Length = 138675

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aaggaaaaacccaagcatga 172
             ||||||||||||||||||||
Sbjct: 28471 aaggaaaaacccaagcatga 28490
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>emb|AL645788.6| Zebrafish DNA sequence from clone BUSM1-17K08 Contains the 5' end of
             the alcam gene for activated leukocyte cell adhesion
             molecule, complete sequence
          Length = 85448

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   acaaactaatcaatcttgacattc 240
             |||||||||||| |||||||||||
Sbjct: 39052 acaaactaatcattcttgacattc 39029
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>gb|AC009365.9|AC009365 Homo sapiens chromosome 7 clone RP11-355K3, complete sequence
          Length = 222794

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    actaatcaatcttgacattc 240
              ||||||||||||||||||||
Sbjct: 178964 actaatcaatcttgacattc 178983
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>emb|BX537347.12| Zebrafish DNA sequence from clone RP71-78P1 in linkage group 4, complete
              sequence
          Length = 197064

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    acaaactaatcaatcttgacattc 240
              |||||||||||| |||||||||||
Sbjct: 187617 acaaactaatcattcttgacattc 187640
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>gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complete sequence
          Length = 207516

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   actgttaaaaacttccatgc 191
             ||||||||||||||||||||
Sbjct: 84021 actgttaaaaacttccatgc 84040
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>gb|BC084294.1| Xenopus laevis hypothetical LOC495257, mRNA (cDNA clone MGC:82775
            IMAGE:5157372), complete cds
          Length = 3046

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  agcatgactgttaaaaacttccat 189
            ||||||||| ||||||||||||||
Sbjct: 1957 agcatgactcttaaaaacttccat 1934
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>emb|AL139023.6|CNS01DX5 Human chromosome 14 DNA sequence BAC R-207M8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174685

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    gaaaagcagagaagcccata 33
             ||||||||||||||||||||
Sbjct: 56901 gaaaagcagagaagcccata 56920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,768,211
Number of Sequences: 3902068
Number of extensions: 6768211
Number of successful extensions: 99163
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99070
Number of HSP's gapped (non-prelim): 92
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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