| Clone Name | rbags5i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UL92_EBV (P03223) Protein BDLF4 | 29 | 3.5 | 2 | KCMB4_MOUSE (Q9JIN6) Calcium-activated potassium channel beta su... | 28 | 6.0 |
|---|
>UL92_EBV (P03223) Protein BDLF4| Length = 225 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = +1 Query: 34 TKIQXTATDDDTWWRPEETMGRTINCATHMYRFFL 138 T+I+ D W PE+ G H+Y +FL Sbjct: 91 TEIRQDTQDQRDKWEPEQVQGLVKTVVNHLYHYFL 125
>KCMB4_MOUSE (Q9JIN6) Calcium-activated potassium channel beta subunit 4| (Calcium-activated potassium channel, subfamily M, beta subunit 4) (Maxi K channel beta subunit 4) (BK channel beta subunit 4) (Slo-beta 4) (K(VCA)beta 4) (Charybdotoxin receptor bet Length = 210 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = -2 Query: 147 QHDQEKPVHMCRTIDRSS--HCFFWPPPCVIVG 55 QH + + V + RT D + HCF WP +VG Sbjct: 152 QHQRPEDVLLQRTHDEIALLHCFLWPVVAFVVG 184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,834,379 Number of Sequences: 219361 Number of extensions: 442325 Number of successful extensions: 852 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 850 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)