ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5i15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OTU_DROME (P10383) Protein ovarian tumor locus 30 6.0

>OTU_DROME (P10383) Protein ovarian tumor locus|
          Length = 853

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 369 SKDCSGDRA---TQSLMYIKILAGIDDFLPDSAGI*PSFVSAEFDFPLLFSSHPSPLE 533
           +++ SG  A   TQ + Y+ ++      LP      P  ++ EF FP+  + HP P E
Sbjct: 511 NQEVSGSAAPPPTQYMNYVPMIPSRPGHLPPPWPASPMAIAEEFPFPISGTPHPPPTE 568


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,547,801
Number of Sequences: 219361
Number of extensions: 1853410
Number of successful extensions: 4039
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4038
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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