>ref|XM_429613.1| PREDICTED: Gallus gallus LOC418919 (LOC418919), mRNA
          Length = 1093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 232 atacactcaaaaaggcagaga 252
           |||||||||||||||||||||
Sbjct: 46  atacactcaaaaaggcagaga 66

>gb|AC132441.3| Mus musculus BAC clone RP23-239J2 from chromosome 18, complete sequence
          Length = 189507

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    agcacatagggcttaaaacaa 70
             |||||||||||||||||||||
Sbjct: 19671 agcacatagggcttaaaacaa 19651

>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
              sequence
          Length = 206478

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    ctgtgaaaaataaaagcatct 158
              |||||||||||||||||||||
Sbjct: 166107 ctgtgaaaaataaaagcatct 166087

>dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C16, full
            insert sequence
          Length = 1992

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 412  tcccttaactcttccaatgatttgc 436
            ||||||||||| |||||||||||||
Sbjct: 1586 tcccttaactcctccaatgatttgc 1562

>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     agcacatagggcttaaaacaa 70
              |||||||||||||||||||||
Sbjct: 154404 agcacatagggcttaaaacaa 154384

>ref|NM_106078.1| Arabidopsis thaliana protein binding AT1G74180 mRNA, complete cds
          Length = 2856

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  tgcaaattcgatttcaacaa 217
            ||||||||||||||||||||
Sbjct: 2232 tgcaaattcgatttcaacaa 2213

>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence
          Length = 207024

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   cccctcccttaactcttcca 427
             ||||||||||||||||||||
Sbjct: 95771 cccctcccttaactcttcca 95752

>ref|XM_954708.1| Neurospora crassa OR74A hypothetical protein (NCU02380.1) partial
           mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 357 ttggccaactcctcctgctgctcattgt 384
           ||||||| ||||||||||||||| ||||
Sbjct: 218 ttggccagctcctcctgctgctccttgt 191

>ref|XM_331155.1| Neurospora crassa OR74A hypothetical protein (NCU02380.1) partial
           mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 357 ttggccaactcctcctgctgctcattgt 384
           ||||||| ||||||||||||||| ||||
Sbjct: 218 ttggccagctcctcctgctgctccttgt 191

>gb|AC153608.10| Mus musculus 6 BAC RP23-79A7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 188294

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   aaaataaaagcatcttcaga 163
             ||||||||||||||||||||
Sbjct: 49448 aaaataaaagcatcttcaga 49429

>gb|AC154422.2| Mus musculus BAC clone RP24-218O2 from chromosome 13, complete sequence
          Length = 170866

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaaaaataaaagcatcttca 161
             ||||||||||||||||||||
Sbjct: 98004 gaaaaataaaagcatcttca 97985

>gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, complete sequence
          Length = 174177

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aaaataaaagcatcttcaga 163
            ||||||||||||||||||||
Sbjct: 2180 aaaataaaagcatcttcaga 2199

>gb|AC118212.7| Mus musculus chromosome 6, clone RP24-170E4, complete sequence
          Length = 190612

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaaaaataaaagcatcttca 161
             ||||||||||||||||||||
Sbjct: 85315 gaaaaataaaagcatcttca 85296

>gb|AC100754.8| Homo sapiens chromosome 15, clone RP11-262I11, complete sequence
          Length = 118732

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   aaaataaaagcatcttcaga 163
             ||||||||||||||||||||
Sbjct: 40817 aaaataaaagcatcttcaga 40798

>emb|BX899180.11| Zebrafish DNA sequence from clone DKEY-287G19 in linkage group 21,
             complete sequence
          Length = 182150

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    atatggtatgctagcacata 57
             ||||||||||||||||||||
Sbjct: 70023 atatggtatgctagcacata 70004

>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence
          Length = 204508

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaaaaataaaagcatcttca 161
              ||||||||||||||||||||
Sbjct: 175754 gaaaaataaaagcatcttca 175773

>gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, complete sequence
          Length = 230585

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaaaaataaaagcatcttca 161
             ||||||||||||||||||||
Sbjct: 71629 gaaaaataaaagcatcttca 71610

>gb|AC145986.2| Pan troglodytes BAC clone RP43-41C9 from 7, complete sequence
          Length = 159512

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gaaaaataaaagcatcttca 161
              ||||||||||||||||||||
Sbjct: 157444 gaaaaataaaagcatcttca 157425

>emb|BX928756.13| Zebrafish DNA sequence from clone CH211-113K9 in linkage group 21,
             complete sequence
          Length = 157210

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    atatggtatgctagcacata 57
             ||||||||||||||||||||
Sbjct: 32960 atatggtatgctagcacata 32941

>emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on chromosome 13 Contains the
              5' end of the gene for mitotic control protein
              (DIS3,KIAA1008), the 5' end of the gene for
              progesterone-induced blocking factor 1 (PIBF1) and a CpG
              island, complete sequence
          Length = 155270

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    aaagtgctttggcaaacttg 337
              ||||||||||||||||||||
Sbjct: 100712 aaagtgctttggcaaacttg 100731

>emb|AL392003.11| Human DNA sequence from clone RP11-331H2 on chromosome 1 Containt the
             3' end of the HSD17B7 gene for hydroxysteroid (17-beta)
             dehydrogenase 7, a novel protein (MGC48998) and a
             cytochrome c oxidase subunit VIIb (COX7B) pseudogene,
             complete sequence
          Length = 191872

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   ataaaagtgctttggcaaac 334
             ||||||||||||||||||||
Sbjct: 23657 ataaaagtgctttggcaaac 23676

>gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome 13, complete sequence
          Length = 205903

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaaaaataaaagcatcttca 161
              ||||||||||||||||||||
Sbjct: 198543 gaaaaataaaagcatcttca 198562

>gb|AC164250.4| Mus musculus  BAC RP24-327O15 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 221612

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  gaaaaataaaagcatcttca 161
            ||||||||||||||||||||
Sbjct: 2635 gaaaaataaaagcatcttca 2654

>emb|AL672151.8| Zebrafish DNA sequence from clone BUSM1-179B20 in linkage group 19
             Contains the abcb3 gene for ATP-binding cassette,
             sub-family B (MDR/TAP), member 3, the 5' part of the
             abcb3l2 (abcb3 like 2) gene, the mhc1ufa gene (major
             histocompatibility complex class I UFA), a putative novel
             gene, the mhc1uda gene (major histocompatibility complex
             class I UDA), a reverse transcriptase pseudogene, the tpsn
             gene for tapasin, the 5' end of a novel gene similar to
             daxx and a CpG island, complete sequence
          Length = 102077

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 52    cacatagggcttaaaacaaagaagccaa 79
             ||||| |||||||||||| |||||||||
Sbjct: 14680 cacattgggcttaaaacacagaagccaa 14653

>emb|AL672185.7| Zebrafish DNA sequence from clone BUSM1-172P2 in linkage group 19
            Contains the 3' part of the abcb3l2 gene for  ATP-binding
            cassette, sub-family B (MDR/TAP), member 3 like 2, the 5'
            part of the mhc1uaa gene (major histocompatibility
            complex class I UAA protein) and four CpG islands,
            complete sequence
          Length = 47697

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 52   cacatagggcttaaaacaaagaagccaa 79
            ||||| |||||||||||| |||||||||
Sbjct: 3450 cacattgggcttaaaacacagaagccaa 3423

>gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence
          Length = 173833

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aaaataaaagcatcttcaga 163
            ||||||||||||||||||||
Sbjct: 2181 aaaataaaagcatcttcaga 2200

>gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, complete sequence
          Length = 197701

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    gctgacatcagtgcccccag 454
              ||||||||||||||||||||
Sbjct: 114340 gctgacatcagtgcccccag 114321

>gb|AC009262.5| Homo sapiens chromosome 7 clone RP11-179B11, complete sequence
          Length = 149255

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaaaaataaaagcatcttca 161
              ||||||||||||||||||||
Sbjct: 147466 gaaaaataaaagcatcttca 147485

>gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, complete sequence
          Length = 212337

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     atagggcttaaaacaaagaagcca 78
              ||||||||||||||||| ||||||
Sbjct: 109341 atagggcttaaaacaaataagcca 109318

>dbj|AK143537.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:E970016M14 product:hypothetical
            Proline-rich region profile containing protein, full
            insert sequence
          Length = 4792

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  cccctcccttaactcttcca 427
            ||||||||||||||||||||
Sbjct: 2593 cccctcccttaactcttcca 2612

>dbj|AK147610.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1088M20 product:hypothetical protein, full
            insert sequence
          Length = 9711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  cccctcccttaactcttcca 427
            ||||||||||||||||||||
Sbjct: 7277 cccctcccttaactcttcca 7296

>gb|AC079678.1|AC079678 Arabidopsis thaliana chromosome 1 BAC F9E11 genomic sequence,
            complete sequence
          Length = 39601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  tgcaaattcgatttcaacaa 217
            ||||||||||||||||||||
Sbjct: 9433 tgcaaattcgatttcaacaa 9414

>gb|AC012066.10| Homo sapiens BAC clone RP11-173H9 from 2, complete sequence
          Length = 188547

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    aaaataaaagcatcttcaga 163
              ||||||||||||||||||||
Sbjct: 154270 aaaataaaagcatcttcaga 154289

>gb|AC007350.1|AC007350 Homo sapiens clone RP11-225G18 from 7p14-15, complete sequence
          Length = 153339

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gaaaaataaaagcatcttca 161
              ||||||||||||||||||||
Sbjct: 114298 gaaaaataaaagcatcttca 114279

>emb|BX510994.6| Zebrafish DNA sequence from clone CH211-51F10 in linkage group 19,
             complete sequence
          Length = 186973

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 52    cacatagggcttaaaacaaagaagccaa 79
             ||||| |||||||||||| |||||||||
Sbjct: 30310 cacattgggcttaaaacacagaagccaa 30337

>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    tttcaacaaccagaagagcc 228
              ||||||||||||||||||||
Sbjct: 136535 tttcaacaaccagaagagcc 136516

>gb|AC155279.5| Mus musculus 6 BAC RP24-85A3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 201663

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gaaaaataaaagcatcttca 161
             ||||||||||||||||||||
Sbjct: 86288 gaaaaataaaagcatcttca 86307

>gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, complete sequence
          Length = 185123

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    aaaataaaagcatcttcaga 163
              ||||||||||||||||||||
Sbjct: 158605 aaaataaaagcatcttcaga 158586


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,053,296
Number of Sequences: 3902068
Number of extensions: 5053296
Number of successful extensions: 121988
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121922
Number of HSP's gapped (non-prelim): 66
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)