ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5i01 |
|---|---|
| Clone Library Name | barley_pub |
>PDIA6_MEDSA (P38661) Probable protein disulfide-isomerase A6 precursor (EC| 5.3.4.1) (P5) Length = 364 Score = 108 bits (269), Expect = 4e-24 Identities = 52/92 (56%), Positives = 69/92 (75%) Frame = -2 Query: 379 VASLXALVKDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTK 200 V L LVK+F +A D+++K + ++IEEE KL G A ++GK Y+ V+KK L+KGSDY K Sbjct: 272 VEDLDELVKEFVAANDEEKKAVFARIEEEVKKLEGSASRYGKIYLKVSKKYLEKGSDYAK 331 Query: 199 KETERLHRLLEKSISPSKADEFAIKKNILSAF 104 E +RL RLLEKSISP+KADE +KKNILS + Sbjct: 332 NEIQRLERLLEKSISPAKADELTLKKNILSTY 363
>PDIA6_ARATH (O22263) Probable protein disulfide-isomerase A6 precursor (EC| 5.3.4.1) (P5) Length = 361 Score = 106 bits (264), Expect = 2e-23 Identities = 51/92 (55%), Positives = 70/92 (76%) Frame = -2 Query: 379 VASLXALVKDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTK 200 V SL ALVK+ +A++D++K +LS+IEEEA+ L G ++GK Y+ +AK ++KGSDY Sbjct: 266 VESLDALVKELVAASEDEKKAVLSRIEEEASTLKGSTTRYGKLYLKLAKSYIEKGSDYAS 325 Query: 199 KETERLHRLLEKSISPSKADEFAIKKNILSAF 104 KETERL R+L KSISP KADE +K+NIL+ F Sbjct: 326 KETERLGRVLGKSISPVKADELTLKRNILTTF 357
>ERP29_MOUSE (P57759) Endoplasmic reticulum protein ERp29 precursor| Length = 262 Score = 46.2 bits (108), Expect = 2e-05 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = -2 Query: 364 ALVKDFXSAAD-DKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETE 188 AL +F A+ + R+ IL + ++ + K Y+ + KIL +G D+ E Sbjct: 165 ALAGEFIKASSIEARQAILKQGQDGLLSVKETEKKWASQYLKIMGKILDQGEDFPASEMA 224 Query: 187 RLHRLLEKSISPSKADEFAIKKNILSAF 104 R+ +L+E +S SK +E NIL+AF Sbjct: 225 RIGKLIENKMSDSKKEELQKSLNILTAF 252
>ERP29_RAT (P52555) Endoplasmic reticulum protein ERp29 precursor (ERp31)| Length = 260 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = -2 Query: 364 ALVKDFXSAAD-DKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETE 188 AL F A+ + R+ IL + ++ + + K Y+ + KIL +G D+ E Sbjct: 163 ALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELA 222 Query: 187 RLHRLLEKSISPSKADEFAIKKNILSAF 104 R+ +L+E +S K +E NIL+AF Sbjct: 223 RISKLIENKMSEGKKEELQRSLNILTAF 250
>ERP29_HUMAN (P30040) Endoplasmic reticulum protein ERp29 precursor (ERp31)| (ERp28) Length = 261 Score = 43.9 bits (102), Expect = 9e-05 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = -2 Query: 364 ALVKDFXSAAD-DKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETE 188 AL +F A+ + R+ +L + ++ + + K + Y+ + KIL +G D+ E Sbjct: 163 ALAGEFIRASGVEARQALLKQGQDNLSSVKETQKKWAEQYLKIMGKILDQGEDFPASEMT 222 Query: 187 RLHRLLEKS-ISPSKADEFAIKKNILSAF 104 R+ RL+EK+ +S K +E NIL+AF Sbjct: 223 RIARLIEKNKMSDGKKEELQKSLNILTAF 251
>ERP38_NEUCR (Q92249) Protein disulfide-isomerase erp38 precursor (EC 5.3.4.1)| (ERp38) Length = 369 Score = 42.4 bits (98), Expect = 3e-04 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Frame = -2 Query: 379 VASLXALVKDFXSAADDKRKEILSKIEEEAAKLSGPA-VKHGKXYVNVAKKILQKGSDYT 203 +A+L +V + A E+ + +E L A +K+ Y+ V K L K Y Sbjct: 267 IAALDEIVAKYTGGAS--LAEVAEEAKEAVKSLKNSAELKYADYYLRVLDK-LSKSEGYA 323 Query: 202 KKETERLHRLLEKS-ISPSKADEFAIKKNILSAF 104 KE RL +L+K ++P+K DE +K N+L F Sbjct: 324 TKEFARLEGILKKGGLAPAKVDELTVKVNVLRKF 357
>TIGA_ASPNG (Q00216) Protein disulfide-isomerase tigA precursor (EC 5.3.4.1)| Length = 359 Score = 40.8 bits (94), Expect = 8e-04 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = -2 Query: 379 VASLXALVKDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTK 200 +ASL L+ SAAD + + +++ A +L K+ + YV VA K L + ++Y Sbjct: 266 IASLDELIAS-TSAAD-----LAAAVKKAATELKD---KYAQYYVKVADK-LSQNAEYAA 315 Query: 199 KETERLHRLLEKSIS-PSKADEFAIKKNILSAF 104 KE RL ++L K S P K D+ + NIL F Sbjct: 316 KELARLEKILAKGGSAPEKVDDLISRSNILRKF 348
>PDI2_SCHPO (O13811) Protein disulfide-isomerase C17H9.14c precursor (EC| 5.3.4.1) Length = 359 Score = 40.0 bits (92), Expect = 0.001 Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = -2 Query: 352 DFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHRL 173 +F ++ ++ +L K+++ A + S K+ Y V +KIL ++ KE +RL +L Sbjct: 275 EFLDMSNAAKEVVLEKVKQLALEDSSRWTKY---YKKVFEKILND-ENWVHKEAKRLSKL 330 Query: 172 L-EKSISPSKADEFAIKKNILSAF 104 L +KSI+ + AD+F + NIL++F Sbjct: 331 LRQKSIALASADDFKTRLNILNSF 354
>ERP29_CHICK (P81628) Endoplasmic reticulum protein ERp29 (Fragment)| Length = 228 Score = 38.1 bits (87), Expect = 0.005 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -2 Query: 361 LVKDFXSAAD-DKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETER 185 L F S D +R+ +L K ++ K K + Y+ + KIL++G ++ E R Sbjct: 155 LASKFMSVTDKSERQSLLKKGQQSLEKAKETEKKSAEQYLKIMSKILEQGEEFAANEVVR 214 Query: 184 LHRLLEKS 161 + +L+EK+ Sbjct: 215 ITKLIEKT 222
>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3110 Score = 33.5 bits (75), Expect = 0.13 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 11/92 (11%) Frame = -2 Query: 358 VKDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAK-----------KILQKGS 212 VKD A+D K++L++I E L G + K +VAK KI+ Sbjct: 2037 VKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNKIIADAD 2096 Query: 211 DYTKKETERLHRLLEKSISPSKADEFAIKKNI 116 K + RL++K + P K E +KKNI Sbjct: 2097 ATVKNLEQEADRLIDK-LKPIKELEDNLKKNI 2127
>RABE1_RAT (O35550) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) Length = 862 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = -2 Query: 364 ALVKDFXSAADDKRKEI-LSKIEE-----EAAKLSGPAVKHGKXYVNVAKKILQKGSDYT 203 A +KD + A+DK KE+ SK++E EA K ++ +N K +LQ+ ++ Sbjct: 196 AALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKL 255 Query: 202 KKETERLHRLLEK 164 +KE + LLE+ Sbjct: 256 RKELHEVCHLLEQ 268
>RABE1_MOUSE (O35551) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) Length = 862 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = -2 Query: 364 ALVKDFXSAADDKRKEI-LSKIEE-----EAAKLSGPAVKHGKXYVNVAKKILQKGSDYT 203 A +KD + A+DK KE+ SK++E EA K ++ +N K +LQ+ ++ Sbjct: 196 AALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKL 255 Query: 202 KKETERLHRLLEK 164 +KE + LLE+ Sbjct: 256 RKELHEVCHLLEQ 268
>RABE1_HUMAN (Q15276) Rab GTPase-binding effector protein 1 (Rabaptin-5)| (Rabaptin-5alpha) (Rabaptin-4) (NY-REN-17 antigen) Length = 862 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%) Frame = -2 Query: 364 ALVKDFXSAADDKRKEI-LSKIEE-----EAAKLSGPAVKHGKXYVNVAKKILQKGSDYT 203 A +KD + A+DK KE+ SK++E EA K ++ +N K +LQ+ ++ Sbjct: 196 AALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKL 255 Query: 202 KKETERLHRLLEK 164 +KE + LLE+ Sbjct: 256 RKELHEVCHLLEQ 268
>ZN544_HUMAN (Q6NX49) Zinc finger protein 544| Length = 715 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Frame = -1 Query: 245 ERCKEDIAEGL*LYKEGN*EAPSLV-GEVDQSFQSR*IRHQEEHSFSFLLL 96 +R +E+++ + +Y+ G E PSLV G+V QS +R +E+S F++L Sbjct: 97 DRAREELSHHVEVYRSGPEEPPSLVLGKVQD--QSNQLREHQENSLRFMVL 145
>PRIA_CHLTR (O84783) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase| priA) (Replication factor Y) Length = 753 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 19/23 (82%) Frame = -2 Query: 226 LQKGSDYTKKETERLHRLLEKSI 158 L K SDYT KET+R+H L+++++ Sbjct: 666 LGKCSDYTLKETQRVHTLIKQNL 688
>DDX51_HUMAN (Q8N8A6) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 666 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +2 Query: 188 LSFLLCIVRALLQYLLCNVHIXLSVLDSRTTELCSLLFNFREDFLPLVIS 337 L+F++ +V+ALL ++C++ + + S +FN D PL +S Sbjct: 264 LAFVIPVVQALLSRVVCHIRALVVLPTKELARQVSKVFNIYTDATPLRVS 313
>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1220 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -2 Query: 331 DKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHRLLE 167 DK+K+ K E+E K GP+ K K+ ++ ++E ER+ RL E Sbjct: 317 DKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEE 371
>DDX51_MOUSE (Q6P9R1) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 639 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/50 (26%), Positives = 28/50 (56%) Frame = +2 Query: 188 LSFLLCIVRALLQYLLCNVHIXLSVLDSRTTELCSLLFNFREDFLPLVIS 337 L+F++ +V+ALL ++C++ + + + S +FN D PL ++ Sbjct: 236 LAFVIPVVQALLHRVVCHIRALVVLPTKELAQQVSKVFNIYTDTTPLRVA 285
>Y100_METJA (Q57564) Hypothetical protein MJ0100| Length = 509 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/76 (25%), Positives = 36/76 (47%) Frame = +2 Query: 104 ES*KNVLLDGEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYLLCNVHIXLSVLDSRTTE 283 E+ K +LDG+F+ R D L + +P+ + +V+ +L H +S++ E Sbjct: 355 ETLKQWILDGKFLLTERVDTLGRAENKPMKSPITLVKDILSKPPITAHSNISIM-----E 409 Query: 284 LCSLLFNFREDFLPLV 331 +L + LP+V Sbjct: 410 AAKILIKHNINHLPIV 425
>STU1_YEAST (P38198) Mitotic spindle protein STU1| Length = 1513 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -2 Query: 232 KILQKGSDYTKKETERLHRLLEKSI 158 ++LQ DYT++ETERL L K++ Sbjct: 1478 RVLQTTPDYTEQETERLFDCLPKNV 1502
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.5 bits (62), Expect = 4.1 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Frame = -3 Query: 228 YCRRALTIQRRKLRG------SIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPAL 67 Y R T QR + G S+A R+R PM S + +SPL P AL Sbjct: 3461 YERERETAQRLQKAGPKPSSLSMAHGRARP----PMRSQASEEESPVSPLGRPRPAGGAL 3516 Query: 66 PXG--CSQ*CNSH 34 P G C Q C+SH Sbjct: 3517 PPGDTCPQFCSSH 3529
>ATXA_LEIDO (P11718) Probable proton ATPase 1A (EC 3.6.3.6) (LDH1A protein)| Length = 974 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +2 Query: 83 GSSPLRGES*KNVLLDGEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYLLCNVHIXL 256 GS+ +RGE V G FG+T LLQ L + I+R ++ + LC + L Sbjct: 220 GSNVVRGEVEGTVQYTGSLTFFGKTAALLQSVESDLGNIHVILRRVM-FSLCAISFML 276
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (Prolamin)| Length = 296 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -3 Query: 207 IQRRKLRGSIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPALP 64 +Q+++ G + + P+P PS++ + QL P P P LP Sbjct: 45 VQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFPPQLP 92
>MST1_DROHY (Q08695) Axoneme-associated protein mst101(1)| Length = 344 Score = 28.1 bits (61), Expect = 5.4 Identities = 26/83 (31%), Positives = 38/83 (45%) Frame = -2 Query: 355 KDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHR 176 K AA K+ L+K +EAA+ A K G+ K Q GSD KK ++ Sbjct: 260 KKCAEAAQKKKCAELAKKAKEAAEKKKCAKKAGE------KGSKQSGSDKGKKNGKKNDM 313 Query: 175 LLEKSISPSKADEFAIKKNILSA 107 + ++ KA E A+KK +A Sbjct: 314 KNKCAMLAKKAKEEALKKKCAAA 336
>GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor (Prolamin)| Length = 313 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -3 Query: 207 IQRRKLRGSIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPALP 64 +Q+++ G + + P+P PS++ + QL P P P LP Sbjct: 42 VQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFLPQLP 89
>GDA5_WHEAT (P04725) Alpha/beta-gliadin A-V precursor (Prolamin)| Length = 319 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -3 Query: 207 IQRRKLRGSIACWRSRSVLPKPMNSPSRRTFFQLSPLNGDDPRAPALP 64 +Q+++ G + + P+P PS++ + QL P P P LP Sbjct: 45 VQQQQFPGQQQQFPPQQPYPQPQPFPSQQPYLQLQPFPQPQPFPPQLP 92
>H1_TETTH (P10156) Histone H1| Length = 163 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Frame = -2 Query: 355 KDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLH- 179 K +AA DK+ +E A K P K KK ++K + KKET++ H Sbjct: 78 KTVHAAAGDKKLSKKRPAKEAAKKAINPG-KKAAAQPKSTKKEVKKDNKTAKKETKKDHK 136 Query: 178 ---RLLEKSISPSKAD 140 + +K P+K D Sbjct: 137 PAKKEAKKETKPAKKD 152
>VATE_DESSY (O06501) V-type ATP synthase subunit E (EC 3.6.3.14) (V-type ATPase| subunit E) Length = 203 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = -2 Query: 361 LVKDFXSAADDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERL 182 ++++ A+ K + ILS+ +EEA KL A K + A+ IL+K + E +R+ Sbjct: 7 IIQEINREAEQKIQYILSEAKEEAEKLKEEARKRAEA---KAEWILRKAKTQAEIEKQRI 63
>YIY9_SCHPO (Q9UUI4) Hypothetical protein C22F8.09 in chromosome I| Length = 419 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%) Frame = -2 Query: 328 KRKEILSKIEEEAAK---------LSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHR 176 KR LSK+ E + ++ P + + K + KGS+ KKE +R+ Sbjct: 164 KRPSTLSKLPESLTENNAKVPNVVIADPGMSYNPDAAAWMKLLDTKGSEELKKEQKRISE 223 Query: 175 LLEKSISPSKADE 137 L EK KA E Sbjct: 224 LEEKERIQKKAFE 236
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = -3 Query: 144 PMNSPSRRTFFQLSPLNGDDPRAPALPXG--CSQ*CNSH 34 PM S + +SPL P ALP G C Q C+SH Sbjct: 3505 PMRSQASEEESPVSPLGRPRPAGGALPPGDTCPQFCSSH 3543
>TXDP3_PARLU (P83258) Delta-palutoxin IT3 (Delta-paluIT3)| Length = 36 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 380 CGKFXCSCQGFPQCR 336 CG+ CSC GF +CR Sbjct: 19 CGEMWCSCPGFGKCR 33
>MSGA_SALTY (P0A1G3) Virulence protein msgA| Length = 79 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 214 SDYTKKETERLHRLLEK 164 SD TK E ERLHR+LE+ Sbjct: 51 SDCTKTEKERLHRMLEE 67
>MSGA_SALTI (P0A1G4) Virulence protein msgA| Length = 79 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 214 SDYTKKETERLHRLLEK 164 SD TK E ERLHR+LE+ Sbjct: 51 SDCTKTEKERLHRMLEE 67
>AFAD_MOUSE (Q9QZQ1) Afadin (Af-6 protein) (Fragment)| Length = 885 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Frame = -2 Query: 334 DDKRKEILSKIEEEA-----AKLSGPAVKHGKXYVNVAKKILQKGS--DYTKKETERLHR 176 DD+ + K E +A A+ +GP + + + K+ L K + KKE E L + Sbjct: 120 DDREGRFVLKNENDAIPAKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKKEKEALRQ 179 Query: 175 LLEKSISPSKADE 137 +K PS+ D+ Sbjct: 180 ASDKEERPSQGDD 192
>PCY1_PLAFK (P49587) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 370 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = -2 Query: 334 DDKRKEILSKIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHRLLEKSIS 155 D++ ++I + ++ A K G ++ +IL+ DY ++ +R E +I Sbjct: 208 DEENEDIYAWLKR-AGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPNELNIG 266 Query: 154 PSKADEFAIKKNIL 113 +KA +KKN++ Sbjct: 267 VTKAQSIKMKKNLI 280
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -3 Query: 255 RXM*TLQRRYCRRALTIQRRKLRGSIACWRSRSVLPKPMNSPSR 124 R M T RRY R + QRR+ + ++A + + P PM+S ++ Sbjct: 466 RRMATSIRRYMRMRMRTQRRRQQRALARSGADTSFPHPMDSSAK 509
>CI068_RAT (Q6AYJ3) Protein C9orf68 homolog| Length = 398 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = -2 Query: 307 KIEEEAAKLSGPAVKHGKXYVNVAKKILQKGSDYTKKETERLHRLLEKSISPSKADEF 134 K+++ +KL+GPA K L KG+ + +RLH +P K+ F Sbjct: 163 KLQQSFSKLNGPANNRKKKPKEKNSDQLSKGTPFWGPSPQRLHLHRPTQRNPGKSFRF 220
>H1_PARAN (P02256) Histone H1, gonadal| Length = 248 Score = 27.3 bits (59), Expect = 9.2 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = -2 Query: 376 ASLXALVKDFXSAADDKRKEILSKIEEEAAKLSGPAV-----KHGKXYVNVAKKILQKGS 212 A A K + A KRK L+K + AAK A K K AKK +K Sbjct: 134 AKAAAAKKARKAKAAAKRKAALAKKKAAAAKRKAAAKAKKAKKPKKKAAKKAKKPAKKSP 193 Query: 211 DYTKKETERLHRLLEKSISPSKADEFAIKK 122 KK ++ + + SP KA + A K+ Sbjct: 194 KKAKKPAKKSPKKKKAKRSPKKAKKAAGKR 223
>RRPL_UUK (P33453) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 2103 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 259 GKXYVNVAKKILQKGSDYTKKETERLHRLLEKSI 158 GK Y K+L+K S Y KK + +H ++E+ + Sbjct: 875 GKTYHR--SKVLEKVSKYVKKSSSHVHHIMEECL 906
>ATXB_LEIDO (P12522) Probable proton ATPase 1B (EC 3.6.3.6) (LDH1B protein)| Length = 974 Score = 27.3 bits (59), Expect = 9.2 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = +2 Query: 83 GSSPLRGES*KNVLLDGEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYLLCNVHIXL 256 GS+ +RGE V G FG+T LLQ L + I+R ++ LC + L Sbjct: 220 GSNVVRGEVEGTVQYTGSLTFFGKTAALLQSVESDLGNIHVILRRVM-LALCAISFIL 276
>PME5_CAEEL (Q9TXQ1) Poly(ADP-ribose) polymerase pme-5 (EC 2.4.2.30) (Poly| ADP-ribose metabolism enzyme 5) Length = 2276 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = -2 Query: 259 GKXYVNVAKKILQKGS----DYTKKETERLHRLLEKSI 158 GK Y+ +AKK+++KG+ KK T +H +L I Sbjct: 508 GKGYLEMAKKLVEKGALVEGKDKKKRTPLIHAMLNGQI 545
>DGK2_DROME (Q09103) Eye-specific diacylglycerol kinase (EC 2.7.1.107) (Retinal| degeneration A protein) (Diglyceride kinase 2) (DGK 2) (DAG kinase 2) Length = 1457 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -3 Query: 159 SVLPKPMNSPSRRTFFQLSPLNGDDPRAPALP 64 ++LP +P TF LSP NGD P P LP Sbjct: 331 TLLPPQPTTPCGITF-TLSPTNGDYPSPPHLP 361
>LIPA1_SYNY3 (P72980) Lipoyl synthase 1 (EC 2.8.1.-) (Lipoic acid synthase 1)| (Lipoate synthase 1) (Lipoyl-acyl-carrier protein synthase 1) (Sulfur insertion protein lipA1) (Lip-syn 1) Length = 289 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 131 GEFIGFGRTDRLLQQAMEPLSFLLCIVRALLQYL 232 G +G G TD ++Q ME L + C + + QYL Sbjct: 199 GIMVGLGETDAEVRQVMEDLRRVDCDILTIGQYL 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,992,223 Number of Sequences: 219361 Number of extensions: 956997 Number of successful extensions: 3315 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 3232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3315 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
